2024-12-08 10:57:10,827 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 10:57:11,175 Running on GPU
2024-12-08 10:57:13,204 Found 6 citations for tools or databases
2024-12-08 10:57:13,204 Query 1/1: SHPRH_PTGES3 (length 1843)
2024-12-08 10:57:13,495 Sleeping for 8s. Reason: PENDING
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2024-12-08 11:04:20,965 Sleeping for 5s. Reason: PENDING
2024-12-08 11:04:26,219 Sleeping for 10s. Reason: RUNNING
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2024-12-08 11:07:33,340 Setting max_seq=508, max_extra_seq=2048
2024-12-08 11:12:53,520 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=67 pTM=0.582 ipTM=0.231
2024-12-08 11:14:36,511 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=66.6 pTM=0.546 ipTM=0.21 tol=5.75
2024-12-08 11:16:19,688 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=66.2 pTM=0.531 ipTM=0.242 tol=8.7
2024-12-08 11:18:02,890 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=66.6 pTM=0.529 ipTM=0.25 tol=2.68
2024-12-08 11:19:46,099 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=66.8 pTM=0.524 ipTM=0.255 tol=2.6
2024-12-08 11:21:29,349 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=66.9 pTM=0.526 ipTM=0.245 tol=1.79
2024-12-08 11:23:12,572 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=67.1 pTM=0.529 ipTM=0.239 tol=2.49
2024-12-08 11:24:55,788 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=67.1 pTM=0.527 ipTM=0.227 tol=1.79
2024-12-08 11:26:38,981 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=67.3 pTM=0.529 ipTM=0.22 tol=2
2024-12-08 11:28:22,215 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=67.2 pTM=0.526 ipTM=0.215 tol=2.68
2024-12-08 11:30:05,345 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=67.2 pTM=0.534 ipTM=0.217 tol=2.15
2024-12-08 11:31:48,449 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=67.1 pTM=0.529 ipTM=0.211 tol=1.74
2024-12-08 11:33:32,146 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=67.3 pTM=0.535 ipTM=0.212 tol=2.1
2024-12-08 11:35:15,746 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67 pTM=0.531 ipTM=0.212 tol=1.69
2024-12-08 11:36:59,350 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=66.9 pTM=0.531 ipTM=0.231 tol=3.49
2024-12-08 11:38:42,892 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=67.1 pTM=0.529 ipTM=0.212 tol=5.23
2024-12-08 11:40:26,355 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=67.2 pTM=0.533 ipTM=0.207 tol=4.9
2024-12-08 11:42:09,874 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=67.1 pTM=0.533 ipTM=0.205 tol=3.8
2024-12-08 11:43:53,387 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=67.2 pTM=0.533 ipTM=0.204 tol=4.26
2024-12-08 11:45:36,951 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=67 pTM=0.53 ipTM=0.214 tol=4.45
2024-12-08 11:47:20,433 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=67.1 pTM=0.534 ipTM=0.228 tol=5.01
2024-12-08 11:49:03,873 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=67.2 pTM=0.531 ipTM=0.217 tol=4.02
2024-12-08 11:50:47,376 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=67.2 pTM=0.527 ipTM=0.208 tol=4.16
2024-12-08 11:52:30,913 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=67.2 pTM=0.536 ipTM=0.205 tol=4.68
2024-12-08 11:54:14,363 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=67.2 pTM=0.535 ipTM=0.208 tol=1.81
2024-12-08 11:55:57,827 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=67.2 pTM=0.535 ipTM=0.209 tol=1.83
2024-12-08 11:57:41,377 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=67.3 pTM=0.532 ipTM=0.208 tol=4.5
2024-12-08 11:59:24,915 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=67.1 pTM=0.53 ipTM=0.208 tol=4.25
2024-12-08 12:01:08,473 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=67.4 pTM=0.535 ipTM=0.205 tol=5.23
2024-12-08 12:02:51,984 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=67.1 pTM=0.532 ipTM=0.205 tol=4.6
2024-12-08 12:04:35,524 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=67.2 pTM=0.533 ipTM=0.208 tol=3.83
2024-12-08 12:04:35,526 alphafold2_multimer_v3_model_1_seed_000 took 3415.4s (30 recycles)
2024-12-08 12:06:21,367 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=66.2 pTM=0.607 ipTM=0.313
2024-12-08 12:08:04,699 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=66.1 pTM=0.563 ipTM=0.27 tol=8.15
2024-12-08 12:09:48,086 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.1 pTM=0.542 ipTM=0.287 tol=14.5
2024-12-08 12:11:31,432 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=66.3 pTM=0.537 ipTM=0.222 tol=4.71
2024-12-08 12:13:14,746 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67 pTM=0.541 ipTM=0.209 tol=6.62
2024-12-08 12:14:58,017 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=66.7 pTM=0.535 ipTM=0.226 tol=6.19
2024-12-08 12:16:41,313 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=67.1 pTM=0.543 ipTM=0.23 tol=10.2
2024-12-08 12:18:24,653 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=67 pTM=0.535 ipTM=0.217 tol=5.8
2024-12-08 12:20:08,075 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=67.1 pTM=0.537 ipTM=0.215 tol=5.35
2024-12-08 12:21:51,498 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=67.3 pTM=0.54 ipTM=0.212 tol=2.88
2024-12-08 12:23:34,962 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=67.4 pTM=0.547 ipTM=0.218 tol=3.76
2024-12-08 12:25:18,450 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=67.2 pTM=0.542 ipTM=0.231 tol=6.14
2024-12-08 12:27:01,973 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=67.6 pTM=0.544 ipTM=0.232 tol=6.19
2024-12-08 12:28:45,418 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=67.1 pTM=0.537 ipTM=0.217 tol=5.41
2024-12-08 12:30:28,823 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=66.9 pTM=0.535 ipTM=0.259 tol=12.1
2024-12-08 12:32:12,183 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=67.3 pTM=0.539 ipTM=0.22 tol=4.77
2024-12-08 12:33:55,533 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=67.2 pTM=0.541 ipTM=0.21 tol=7.23
2024-12-08 12:35:38,903 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=67.4 pTM=0.546 ipTM=0.229 tol=5.23
2024-12-08 12:37:22,305 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=67.2 pTM=0.542 ipTM=0.224 tol=4.68
2024-12-08 12:39:05,808 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=66.9 pTM=0.537 ipTM=0.216 tol=9.03
2024-12-08 12:40:49,357 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=67 pTM=0.542 ipTM=0.228 tol=5.03
2024-12-08 12:42:32,948 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=66.7 pTM=0.537 ipTM=0.214 tol=2.17
2024-12-08 12:44:16,508 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=67.2 pTM=0.539 ipTM=0.221 tol=5.14
2024-12-08 12:46:00,051 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=67.1 pTM=0.538 ipTM=0.222 tol=2.7
2024-12-08 12:47:43,581 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=67.2 pTM=0.542 ipTM=0.221 tol=3.14
2024-12-08 12:49:27,198 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=67.1 pTM=0.537 ipTM=0.22 tol=4.38
2024-12-08 12:51:10,848 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=67.3 pTM=0.54 ipTM=0.221 tol=4.04
2024-12-08 12:52:54,441 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=67.1 pTM=0.541 ipTM=0.219 tol=4.36
2024-12-08 12:54:37,988 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=67.2 pTM=0.543 ipTM=0.227 tol=3.44
2024-12-08 12:56:21,571 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=67.2 pTM=0.542 ipTM=0.223 tol=3.51
2024-12-08 12:58:05,169 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=67.2 pTM=0.539 ipTM=0.22 tol=5.24
2024-12-08 12:58:05,171 alphafold2_multimer_v3_model_2_seed_000 took 3207.1s (30 recycles)
2024-12-08 12:59:51,142 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=66.8 pTM=0.586 ipTM=0.267
2024-12-08 13:01:34,583 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.7 pTM=0.569 ipTM=0.252 tol=9.59
2024-12-08 13:03:18,056 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=66.9 pTM=0.565 ipTM=0.248 tol=3.63
2024-12-08 13:05:01,520 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=67.1 pTM=0.567 ipTM=0.245 tol=2.74
2024-12-08 13:06:44,969 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=67.2 pTM=0.563 ipTM=0.244 tol=3.2
2024-12-08 13:08:28,421 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=67.1 pTM=0.562 ipTM=0.244 tol=2.79
2024-12-08 13:10:11,836 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=67.5 pTM=0.572 ipTM=0.241 tol=2.52
2024-12-08 13:11:55,167 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=67.4 pTM=0.571 ipTM=0.244 tol=3.8
2024-12-08 13:13:38,564 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=67.6 pTM=0.569 ipTM=0.249 tol=5.08
2024-12-08 13:15:22,012 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=67.3 pTM=0.563 ipTM=0.248 tol=3.61
2024-12-08 13:17:05,373 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=67.6 pTM=0.571 ipTM=0.25 tol=3.54
2024-12-08 13:18:48,786 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=67.4 pTM=0.569 ipTM=0.252 tol=3.27
2024-12-08 13:20:32,023 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=67.4 pTM=0.569 ipTM=0.252 tol=3.05
2024-12-08 13:22:15,193 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=67.4 pTM=0.568 ipTM=0.251 tol=4.18
2024-12-08 13:23:58,341 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=67.3 pTM=0.566 ipTM=0.246 tol=4.71
2024-12-08 13:25:41,524 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=67.6 pTM=0.571 ipTM=0.249 tol=2.39
2024-12-08 13:27:24,784 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=67.5 pTM=0.568 ipTM=0.246 tol=3.22
2024-12-08 13:29:07,974 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=67.6 pTM=0.572 ipTM=0.249 tol=4.56
2024-12-08 13:30:51,123 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=67.4 pTM=0.569 ipTM=0.248 tol=3.46
2024-12-08 13:32:34,365 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=67.2 pTM=0.566 ipTM=0.25 tol=4.21
2024-12-08 13:34:17,633 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=67.2 pTM=0.57 ipTM=0.25 tol=1.96
2024-12-08 13:36:00,820 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.4 pTM=0.567 ipTM=0.252 tol=3.37
2024-12-08 13:37:44,021 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=67.4 pTM=0.564 ipTM=0.251 tol=3.41
2024-12-08 13:39:27,309 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.5 pTM=0.569 ipTM=0.252 tol=2.02
2024-12-08 13:41:10,465 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=67.3 pTM=0.568 ipTM=0.249 tol=2.22
2024-12-08 13:42:53,652 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67.3 pTM=0.568 ipTM=0.251 tol=1.43
2024-12-08 13:44:36,805 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=67.6 pTM=0.57 ipTM=0.251 tol=3.28
2024-12-08 13:46:20,016 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.4 pTM=0.568 ipTM=0.254 tol=4.39
2024-12-08 13:48:03,153 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=67.5 pTM=0.569 ipTM=0.258 tol=1.23
2024-12-08 13:49:46,284 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.4 pTM=0.566 ipTM=0.253 tol=3.44
2024-12-08 13:51:29,458 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.3 pTM=0.566 ipTM=0.252 tol=3.73
2024-12-08 13:51:29,460 alphafold2_multimer_v3_model_3_seed_000 took 3201.8s (30 recycles)
2024-12-08 13:53:14,994 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=64.9 pTM=0.595 ipTM=0.344
2024-12-08 13:54:58,090 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=64.7 pTM=0.574 ipTM=0.25 tol=6.36
2024-12-08 13:56:41,273 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=64.9 pTM=0.57 ipTM=0.241 tol=5.66
2024-12-08 13:58:24,400 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=65.6 pTM=0.579 ipTM=0.244 tol=4.44
2024-12-08 14:00:07,558 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=65.4 pTM=0.564 ipTM=0.236 tol=3.89
2024-12-08 14:01:50,729 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=65.8 pTM=0.574 ipTM=0.247 tol=4.2
2024-12-08 14:03:33,882 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=65.8 pTM=0.57 ipTM=0.235 tol=5.14
2024-12-08 14:05:16,988 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=65.8 pTM=0.575 ipTM=0.237 tol=4.68
2024-12-08 14:07:00,224 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=65.8 pTM=0.559 ipTM=0.204 tol=11.3
2024-12-08 14:08:43,493 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=65.8 pTM=0.562 ipTM=0.214 tol=7.08
2024-12-08 14:10:26,718 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=65.8 pTM=0.571 ipTM=0.229 tol=6.55
2024-12-08 14:12:09,908 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=65.8 pTM=0.574 ipTM=0.241 tol=3.82
2024-12-08 14:13:53,157 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=65.9 pTM=0.565 ipTM=0.201 tol=6.27
2024-12-08 14:15:36,361 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=65.9 pTM=0.575 ipTM=0.234 tol=4.99
2024-12-08 14:17:19,706 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=65.9 pTM=0.572 ipTM=0.225 tol=3.98
2024-12-08 14:19:03,114 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=66.3 pTM=0.578 ipTM=0.233 tol=3.77
2024-12-08 14:20:46,518 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=65.8 pTM=0.572 ipTM=0.219 tol=5.44
2024-12-08 14:22:29,766 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=66.2 pTM=0.581 ipTM=0.231 tol=4.03
2024-12-08 14:24:13,053 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=66 pTM=0.57 ipTM=0.218 tol=3.68
2024-12-08 14:25:56,261 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=66.3 pTM=0.582 ipTM=0.234 tol=4.06
2024-12-08 14:27:39,493 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=66.1 pTM=0.568 ipTM=0.2 tol=11.8
2024-12-08 14:29:22,659 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=66.2 pTM=0.57 ipTM=0.212 tol=5.63
2024-12-08 14:31:05,857 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=66.1 pTM=0.569 ipTM=0.218 tol=5.02
2024-12-08 14:32:49,049 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=66.2 pTM=0.577 ipTM=0.225 tol=4.94
2024-12-08 14:34:32,271 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=65.9 pTM=0.57 ipTM=0.216 tol=3.69
2024-12-08 14:36:15,531 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=66 pTM=0.576 ipTM=0.225 tol=3.63
2024-12-08 14:37:58,842 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=65.9 pTM=0.565 ipTM=0.206 tol=4.98
2024-12-08 14:39:42,128 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=66.1 pTM=0.575 ipTM=0.229 tol=4.9
2024-12-08 14:41:25,534 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=65.9 pTM=0.564 ipTM=0.197 tol=4.88
2024-12-08 14:43:08,820 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=66 pTM=0.573 ipTM=0.227 tol=5.59
2024-12-08 14:44:52,208 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=65.8 pTM=0.563 ipTM=0.21 tol=3.41
2024-12-08 14:44:52,210 alphafold2_multimer_v3_model_4_seed_000 took 3200.2s (30 recycles)
2024-12-08 14:46:37,823 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=65.5 pTM=0.581 ipTM=0.296
2024-12-08 14:48:20,953 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=65.5 pTM=0.57 ipTM=0.26 tol=5.01
2024-12-08 14:50:04,227 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=65.6 pTM=0.555 ipTM=0.209 tol=8
2024-12-08 14:51:47,457 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=65.7 pTM=0.57 ipTM=0.239 tol=7.22
2024-12-08 14:53:30,687 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=66.8 pTM=0.571 ipTM=0.238 tol=3.15
2024-12-08 14:55:13,978 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=66.8 pTM=0.569 ipTM=0.238 tol=2.79
2024-12-08 14:56:57,236 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=66.8 pTM=0.57 ipTM=0.237 tol=2.75
2024-12-08 14:58:40,448 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=66.8 pTM=0.57 ipTM=0.232 tol=1.94
2024-12-08 15:00:23,733 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=66.9 pTM=0.573 ipTM=0.233 tol=2.57
2024-12-08 15:02:06,940 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=66.8 pTM=0.569 ipTM=0.23 tol=2.63
2024-12-08 15:03:50,176 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=66.9 pTM=0.574 ipTM=0.233 tol=2.06
2024-12-08 15:05:33,352 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=66.8 pTM=0.571 ipTM=0.23 tol=2.47
2024-12-08 15:07:16,561 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=66.9 pTM=0.572 ipTM=0.232 tol=1.16
2024-12-08 15:08:59,771 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=66.7 pTM=0.573 ipTM=0.233 tol=1.14
2024-12-08 15:10:42,932 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=66.9 pTM=0.574 ipTM=0.236 tol=0.956
2024-12-08 15:12:26,059 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=66.9 pTM=0.573 ipTM=0.236 tol=1.09
2024-12-08 15:14:09,119 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67.1 pTM=0.576 ipTM=0.235 tol=0.99
2024-12-08 15:15:52,237 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=66.9 pTM=0.577 ipTM=0.232 tol=0.811
2024-12-08 15:17:35,377 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=66.8 pTM=0.57 ipTM=0.232 tol=1.3
2024-12-08 15:19:18,479 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=66.8 pTM=0.57 ipTM=0.23 tol=2.78
2024-12-08 15:21:01,642 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=66.9 pTM=0.576 ipTM=0.234 tol=3.04
2024-12-08 15:22:44,836 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=66.9 pTM=0.573 ipTM=0.232 tol=1.38
2024-12-08 15:24:28,015 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=66.8 pTM=0.568 ipTM=0.233 tol=1.11
2024-12-08 15:26:11,184 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=67.1 pTM=0.573 ipTM=0.231 tol=1.21
2024-12-08 15:27:54,324 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=66.8 pTM=0.571 ipTM=0.227 tol=1.9
2024-12-08 15:29:37,442 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=66.6 pTM=0.57 ipTM=0.228 tol=2.36
2024-12-08 15:31:20,605 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=67.1 pTM=0.572 ipTM=0.229 tol=1.3
2024-12-08 15:33:03,853 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=66.9 pTM=0.568 ipTM=0.229 tol=1.26
2024-12-08 15:34:47,085 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=66.8 pTM=0.574 ipTM=0.23 tol=3.78
2024-12-08 15:36:30,315 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=66.9 pTM=0.574 ipTM=0.234 tol=1.63
2024-12-08 15:38:13,616 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=66.9 pTM=0.573 ipTM=0.234 tol=0.843
2024-12-08 15:38:13,618 alphafold2_multimer_v3_model_5_seed_000 took 3198.9s (30 recycles)
2024-12-08 15:38:16,150 reranking models by 'multimer' metric
2024-12-08 15:38:20,510 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 15:44:24,368 Relaxation took 368.2s
2024-12-08 15:44:24,368 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.3 pTM=0.566 ipTM=0.252
2024-12-08 15:49:40,604 Relaxation took 316.2s
2024-12-08 15:49:40,604 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=66.9 pTM=0.573 ipTM=0.234
2024-12-08 16:01:40,392 Relaxation took 719.8s
2024-12-08 16:01:40,392 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=67.2 pTM=0.539 ipTM=0.22
2024-12-08 16:06:57,300 Relaxation took 316.9s
2024-12-08 16:06:57,301 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=65.8 pTM=0.563 ipTM=0.21
2024-12-08 16:12:29,242 Relaxation took 331.9s
2024-12-08 16:12:29,242 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=67.2 pTM=0.533 ipTM=0.208
2024-12-08 16:12:34,600 Done