2024-12-08 12:02:33,324 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 12:02:33,679 Running on GPU
2024-12-08 12:02:37,165 Found 6 citations for tools or databases
2024-12-08 12:02:37,166 Query 1/1: SKP2_CDK1 (length 721)
2024-12-08 12:02:37,476 Sleeping for 10s. Reason: PENDING
2024-12-08 12:02:47,739 Sleeping for 7s. Reason: RUNNING
2024-12-08 12:02:55,003 Sleeping for 7s. Reason: RUNNING
2024-12-08 12:03:02,266 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:03:08,522 Sleeping for 7s. Reason: RUNNING
2024-12-08 12:03:15,781 Sleeping for 8s. Reason: RUNNING
2024-12-08 12:03:24,038 Sleeping for 9s. Reason: RUNNING
2024-12-08 12:03:33,298 Sleeping for 9s. Reason: RUNNING
2024-12-08 12:03:42,559 Sleeping for 5s. Reason: RUNNING
2024-12-08 12:03:47,810 Sleeping for 9s. Reason: RUNNING
2024-12-08 12:03:57,082 Sleeping for 7s. Reason: RUNNING
2024-12-08 12:04:04,336 Sleeping for 5s. Reason: RUNNING
2024-12-08 12:04:09,590 Sleeping for 10s. Reason: RUNNING
2024-12-08 12:04:19,846 Sleeping for 9s. Reason: RUNNING
2024-12-08 12:04:29,264 Sleeping for 10s. Reason: RUNNING
2024-12-08 12:04:39,528 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:04:45,789 Sleeping for 5s. Reason: RUNNING
2024-12-08 12:04:51,044 Sleeping for 7s. Reason: RUNNING
2024-12-08 12:04:58,305 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:05:04,557 Sleeping for 10s. Reason: RUNNING
2024-12-08 12:05:16,611 Sleeping for 8s. Reason: PENDING
2024-12-08 12:05:24,873 Sleeping for 10s. Reason: RUNNING
2024-12-08 12:05:35,133 Sleeping for 7s. Reason: RUNNING
2024-12-08 12:05:42,409 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:05:48,666 Sleeping for 10s. Reason: RUNNING
2024-12-08 12:05:58,924 Sleeping for 8s. Reason: RUNNING
2024-12-08 12:06:07,187 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:06:13,442 Sleeping for 5s. Reason: RUNNING
2024-12-08 12:06:18,700 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:06:24,955 Sleeping for 10s. Reason: RUNNING
2024-12-08 12:06:35,218 Sleeping for 8s. Reason: RUNNING
2024-12-08 12:06:43,488 Sleeping for 10s. Reason: RUNNING
2024-12-08 12:06:57,601 Setting max_seq=508, max_extra_seq=2048
2024-12-08 12:10:37,030 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=74.9 pTM=0.484 ipTM=0.148
2024-12-08 12:10:50,469 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=75.8 pTM=0.486 ipTM=0.134 tol=7.06
2024-12-08 12:11:03,926 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=75.2 pTM=0.496 ipTM=0.142 tol=4
2024-12-08 12:11:17,405 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=75.8 pTM=0.502 ipTM=0.157 tol=2.32
2024-12-08 12:11:30,893 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=75.9 pTM=0.5 ipTM=0.15 tol=2.73
2024-12-08 12:11:44,376 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=75.8 pTM=0.509 ipTM=0.172 tol=3.06
2024-12-08 12:11:57,878 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=75.4 pTM=0.51 ipTM=0.168 tol=1.6
2024-12-08 12:12:11,358 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=75 pTM=0.512 ipTM=0.177 tol=1.8
2024-12-08 12:12:24,868 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=75 pTM=0.515 ipTM=0.18 tol=2.07
2024-12-08 12:12:38,359 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=74.9 pTM=0.514 ipTM=0.18 tol=2.19
2024-12-08 12:12:51,865 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=74.6 pTM=0.52 ipTM=0.187 tol=2.07
2024-12-08 12:13:05,396 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=74.2 pTM=0.518 ipTM=0.181 tol=2.62
2024-12-08 12:13:18,901 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=74.1 pTM=0.522 ipTM=0.188 tol=3.15
2024-12-08 12:13:32,417 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=74.2 pTM=0.521 ipTM=0.183 tol=2.18
2024-12-08 12:13:45,942 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=74.2 pTM=0.522 ipTM=0.185 tol=1.76
2024-12-08 12:13:59,485 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=74.3 pTM=0.516 ipTM=0.174 tol=1.24
2024-12-08 12:14:13,013 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=74.1 pTM=0.512 ipTM=0.172 tol=1.81
2024-12-08 12:14:26,547 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=74.1 pTM=0.514 ipTM=0.172 tol=2.88
2024-12-08 12:14:40,074 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=75.8 pTM=0.51 ipTM=0.163 tol=6.8
2024-12-08 12:14:53,598 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=74.8 pTM=0.512 ipTM=0.173 tol=3.47
2024-12-08 12:15:07,131 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=74.4 pTM=0.519 ipTM=0.185 tol=3.37
2024-12-08 12:15:20,657 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=74.4 pTM=0.518 ipTM=0.181 tol=2.53
2024-12-08 12:15:34,199 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=74.2 pTM=0.518 ipTM=0.184 tol=3.52
2024-12-08 12:15:47,747 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=74.6 pTM=0.52 ipTM=0.188 tol=2.62
2024-12-08 12:16:01,293 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=74.3 pTM=0.518 ipTM=0.185 tol=1.26
2024-12-08 12:16:14,838 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=74 pTM=0.519 ipTM=0.188 tol=1.22
2024-12-08 12:16:28,374 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=74.4 pTM=0.515 ipTM=0.182 tol=2.88
2024-12-08 12:16:41,924 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=74.8 pTM=0.513 ipTM=0.172 tol=1.75
2024-12-08 12:16:55,464 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=74.9 pTM=0.511 ipTM=0.168 tol=1.46
2024-12-08 12:17:09,009 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=74.8 pTM=0.512 ipTM=0.172 tol=1.39
2024-12-08 12:17:22,555 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=74.5 pTM=0.513 ipTM=0.175 tol=2.18
2024-12-08 12:17:22,555 alphafold2_multimer_v3_model_1_seed_000 took 618.4s (30 recycles)
2024-12-08 12:17:36,589 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=75.9 pTM=0.523 ipTM=0.189
2024-12-08 12:17:50,211 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=76.1 pTM=0.547 ipTM=0.238 tol=7.55
2024-12-08 12:18:03,854 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=76.1 pTM=0.536 ipTM=0.206 tol=5.16
2024-12-08 12:18:17,488 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=76.4 pTM=0.538 ipTM=0.218 tol=2.54
2024-12-08 12:18:31,117 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=76.6 pTM=0.531 ipTM=0.202 tol=1.35
2024-12-08 12:18:44,748 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=76.6 pTM=0.535 ipTM=0.208 tol=1.31
2024-12-08 12:18:58,379 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=76.2 pTM=0.532 ipTM=0.202 tol=2.82
2024-12-08 12:19:12,004 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=76.3 pTM=0.532 ipTM=0.199 tol=1.12
2024-12-08 12:19:25,636 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=76.6 pTM=0.528 ipTM=0.195 tol=1.53
2024-12-08 12:19:39,269 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=76.6 pTM=0.53 ipTM=0.202 tol=1.87
2024-12-08 12:19:52,892 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=76.2 pTM=0.533 ipTM=0.207 tol=2.04
2024-12-08 12:20:06,544 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=76.3 pTM=0.533 ipTM=0.204 tol=1.87
2024-12-08 12:20:20,180 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=76.4 pTM=0.532 ipTM=0.201 tol=1.56
2024-12-08 12:20:33,805 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=76.1 pTM=0.533 ipTM=0.207 tol=1.84
2024-12-08 12:20:47,448 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=76.4 pTM=0.531 ipTM=0.195 tol=3.32
2024-12-08 12:21:01,088 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=76.1 pTM=0.533 ipTM=0.201 tol=1.79
2024-12-08 12:21:14,722 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=76.1 pTM=0.531 ipTM=0.203 tol=1.93
2024-12-08 12:21:28,352 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=76.2 pTM=0.537 ipTM=0.21 tol=3.36
2024-12-08 12:21:41,986 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=76.4 pTM=0.528 ipTM=0.195 tol=1.78
2024-12-08 12:21:55,613 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=76.3 pTM=0.534 ipTM=0.208 tol=1.24
2024-12-08 12:22:09,235 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=76.1 pTM=0.533 ipTM=0.207 tol=1.14
2024-12-08 12:22:22,862 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=76.2 pTM=0.533 ipTM=0.204 tol=2.84
2024-12-08 12:22:36,493 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=76 pTM=0.529 ipTM=0.2 tol=1.88
2024-12-08 12:22:50,131 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=76.4 pTM=0.536 ipTM=0.209 tol=1.77
2024-12-08 12:23:03,757 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=76.5 pTM=0.529 ipTM=0.198 tol=2.43
2024-12-08 12:23:17,390 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=76.1 pTM=0.532 ipTM=0.207 tol=2.78
2024-12-08 12:23:31,021 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=75.8 pTM=0.531 ipTM=0.203 tol=2.65
2024-12-08 12:23:44,655 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=76.2 pTM=0.533 ipTM=0.203 tol=2.45
2024-12-08 12:23:58,285 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=76.3 pTM=0.531 ipTM=0.201 tol=2.18
2024-12-08 12:24:11,926 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=76.2 pTM=0.529 ipTM=0.199 tol=2.53
2024-12-08 12:24:25,576 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=75.9 pTM=0.532 ipTM=0.205 tol=4.31
2024-12-08 12:24:25,576 alphafold2_multimer_v3_model_2_seed_000 took 422.6s (30 recycles)
2024-12-08 12:24:39,612 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=76.2 pTM=0.537 ipTM=0.245
2024-12-08 12:24:53,251 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=76.4 pTM=0.517 ipTM=0.181 tol=6.91
2024-12-08 12:25:06,874 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=76.2 pTM=0.532 ipTM=0.216 tol=3.82
2024-12-08 12:25:20,507 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=76.3 pTM=0.512 ipTM=0.162 tol=8.66
2024-12-08 12:25:34,140 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=76.9 pTM=0.518 ipTM=0.174 tol=3.49
2024-12-08 12:25:47,775 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=76.7 pTM=0.517 ipTM=0.172 tol=2.5
2024-12-08 12:26:01,407 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=76.8 pTM=0.525 ipTM=0.193 tol=3.03
2024-12-08 12:26:15,040 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=76.5 pTM=0.521 ipTM=0.184 tol=2.7
2024-12-08 12:26:28,672 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=76.8 pTM=0.527 ipTM=0.199 tol=3.4
2024-12-08 12:26:42,308 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=76.8 pTM=0.516 ipTM=0.171 tol=2.89
2024-12-08 12:26:55,933 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=76.6 pTM=0.532 ipTM=0.204 tol=3.93
2024-12-08 12:27:09,563 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=76.8 pTM=0.521 ipTM=0.185 tol=1.86
2024-12-08 12:27:23,189 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=76.8 pTM=0.53 ipTM=0.202 tol=3.62
2024-12-08 12:27:36,820 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=76.6 pTM=0.52 ipTM=0.186 tol=5.23
2024-12-08 12:27:50,449 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=76.9 pTM=0.532 ipTM=0.211 tol=3.61
2024-12-08 12:28:04,089 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=77.1 pTM=0.515 ipTM=0.168 tol=3.18
2024-12-08 12:28:17,701 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=76.9 pTM=0.532 ipTM=0.211 tol=3.16
2024-12-08 12:28:31,332 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=76.7 pTM=0.519 ipTM=0.181 tol=2.66
2024-12-08 12:28:44,952 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=76.9 pTM=0.53 ipTM=0.207 tol=3.44
2024-12-08 12:28:58,567 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=76.8 pTM=0.518 ipTM=0.18 tol=3.12
2024-12-08 12:29:12,175 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=76.8 pTM=0.531 ipTM=0.209 tol=2.38
2024-12-08 12:29:25,785 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=76.6 pTM=0.519 ipTM=0.185 tol=3.02
2024-12-08 12:29:39,379 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=76.8 pTM=0.53 ipTM=0.208 tol=2.99
2024-12-08 12:29:52,988 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=76.7 pTM=0.521 ipTM=0.189 tol=3.69
2024-12-08 12:30:06,583 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=76.8 pTM=0.529 ipTM=0.208 tol=3.29
2024-12-08 12:30:20,181 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=76.6 pTM=0.52 ipTM=0.189 tol=1.63
2024-12-08 12:30:33,764 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=76.9 pTM=0.528 ipTM=0.207 tol=3.3
2024-12-08 12:30:47,363 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=76.6 pTM=0.524 ipTM=0.201 tol=2.4
2024-12-08 12:31:00,943 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=76.7 pTM=0.527 ipTM=0.205 tol=1.63
2024-12-08 12:31:14,541 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=76.6 pTM=0.525 ipTM=0.205 tol=1.66
2024-12-08 12:31:28,140 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=76.7 pTM=0.527 ipTM=0.206 tol=2.88
2024-12-08 12:31:28,140 alphafold2_multimer_v3_model_3_seed_000 took 422.1s (30 recycles)
2024-12-08 12:31:42,155 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=75.1 pTM=0.485 ipTM=0.302
2024-12-08 12:31:55,773 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=76.9 pTM=0.495 ipTM=0.129 tol=6.8
2024-12-08 12:32:09,375 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=76.6 pTM=0.498 ipTM=0.132 tol=4.22
2024-12-08 12:32:22,986 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=76.8 pTM=0.493 ipTM=0.122 tol=3.48
2024-12-08 12:32:36,591 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=76.6 pTM=0.494 ipTM=0.16 tol=3.77
2024-12-08 12:32:50,197 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=76.7 pTM=0.496 ipTM=0.123 tol=3.49
2024-12-08 12:33:03,792 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=76.8 pTM=0.499 ipTM=0.132 tol=3.64
2024-12-08 12:33:17,401 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=77 pTM=0.496 ipTM=0.123 tol=3.52
2024-12-08 12:33:31,012 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=77 pTM=0.495 ipTM=0.144 tol=1.77
2024-12-08 12:33:44,633 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=77.2 pTM=0.496 ipTM=0.124 tol=3.31
2024-12-08 12:33:58,253 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=77.1 pTM=0.498 ipTM=0.13 tol=3.67
2024-12-08 12:34:11,869 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=77.1 pTM=0.496 ipTM=0.126 tol=3.41
2024-12-08 12:34:25,471 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=77.1 pTM=0.496 ipTM=0.142 tol=3.71
2024-12-08 12:34:39,089 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=76.9 pTM=0.495 ipTM=0.128 tol=2.46
2024-12-08 12:34:52,705 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=76.9 pTM=0.495 ipTM=0.131 tol=2.26
2024-12-08 12:35:06,315 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=76.2 pTM=0.496 ipTM=0.128 tol=3.11
2024-12-08 12:35:19,921 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=76.5 pTM=0.494 ipTM=0.129 tol=4.18
2024-12-08 12:35:33,537 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=76.7 pTM=0.495 ipTM=0.127 tol=5.47
2024-12-08 12:35:47,143 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=76.8 pTM=0.496 ipTM=0.134 tol=4.6
2024-12-08 12:36:00,745 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=76.2 pTM=0.495 ipTM=0.125 tol=2.96
2024-12-08 12:36:14,344 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=76.4 pTM=0.496 ipTM=0.125 tol=3.02
2024-12-08 12:36:27,955 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=76.2 pTM=0.494 ipTM=0.129 tol=8.9
2024-12-08 12:36:41,566 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=76.6 pTM=0.494 ipTM=0.134 tol=6.75
2024-12-08 12:36:55,186 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=76.4 pTM=0.494 ipTM=0.127 tol=4.24
2024-12-08 12:37:08,784 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=76.2 pTM=0.495 ipTM=0.126 tol=4.6
2024-12-08 12:37:22,395 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=76.3 pTM=0.495 ipTM=0.128 tol=5.67
2024-12-08 12:37:35,999 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=75.9 pTM=0.497 ipTM=0.127 tol=2.89
2024-12-08 12:37:49,613 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=75.9 pTM=0.494 ipTM=0.125 tol=2.66
2024-12-08 12:38:03,218 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=75.7 pTM=0.497 ipTM=0.128 tol=5.28
2024-12-08 12:38:16,842 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=75.6 pTM=0.494 ipTM=0.13 tol=6.57
2024-12-08 12:38:30,448 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=75.8 pTM=0.496 ipTM=0.131 tol=5.3
2024-12-08 12:38:30,449 alphafold2_multimer_v3_model_4_seed_000 took 421.9s (30 recycles)
2024-12-08 12:38:44,463 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=75.1 pTM=0.551 ipTM=0.269
2024-12-08 12:38:58,096 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=74.7 pTM=0.532 ipTM=0.214 tol=11.1
2024-12-08 12:39:11,733 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=75.5 pTM=0.529 ipTM=0.203 tol=4.68
2024-12-08 12:39:25,370 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=75.6 pTM=0.527 ipTM=0.198 tol=1.75
2024-12-08 12:39:39,028 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=75.8 pTM=0.53 ipTM=0.203 tol=1.92
2024-12-08 12:39:52,687 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=76 pTM=0.528 ipTM=0.199 tol=1.49
2024-12-08 12:40:06,344 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=75.4 pTM=0.533 ipTM=0.21 tol=3.09
2024-12-08 12:40:20,014 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=75.7 pTM=0.526 ipTM=0.195 tol=2.44
2024-12-08 12:40:33,683 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=75.4 pTM=0.535 ipTM=0.213 tol=3.33
2024-12-08 12:40:47,351 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=75.4 pTM=0.53 ipTM=0.203 tol=2.16
2024-12-08 12:41:01,020 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=75.2 pTM=0.536 ipTM=0.213 tol=2.91
2024-12-08 12:41:14,692 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=75.4 pTM=0.531 ipTM=0.204 tol=4.68
2024-12-08 12:41:28,366 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=75.7 pTM=0.536 ipTM=0.213 tol=2.69
2024-12-08 12:41:42,044 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=75.4 pTM=0.534 ipTM=0.211 tol=3.23
2024-12-08 12:41:55,735 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=75.6 pTM=0.534 ipTM=0.209 tol=1.46
2024-12-08 12:42:09,425 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=75.2 pTM=0.536 ipTM=0.214 tol=2.02
2024-12-08 12:42:23,107 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=75.6 pTM=0.536 ipTM=0.213 tol=1.74
2024-12-08 12:42:36,794 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=75.2 pTM=0.534 ipTM=0.211 tol=1.63
2024-12-08 12:42:50,486 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=75.4 pTM=0.536 ipTM=0.212 tol=1.67
2024-12-08 12:43:04,155 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=75.1 pTM=0.537 ipTM=0.219 tol=3.02
2024-12-08 12:43:17,839 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=75.4 pTM=0.538 ipTM=0.218 tol=3.65
2024-12-08 12:43:31,526 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=75.2 pTM=0.535 ipTM=0.214 tol=2.27
2024-12-08 12:43:45,205 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=75.2 pTM=0.537 ipTM=0.215 tol=3.18
2024-12-08 12:43:58,881 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=75.2 pTM=0.537 ipTM=0.217 tol=5.11
2024-12-08 12:44:12,573 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=75.4 pTM=0.537 ipTM=0.214 tol=5.05
2024-12-08 12:44:26,260 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=75.2 pTM=0.535 ipTM=0.214 tol=4.07
2024-12-08 12:44:39,938 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=75.2 pTM=0.536 ipTM=0.213 tol=3.77
2024-12-08 12:44:53,617 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=75.2 pTM=0.531 ipTM=0.205 tol=2.84
2024-12-08 12:45:07,289 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=75.2 pTM=0.537 ipTM=0.213 tol=3.47
2024-12-08 12:45:20,959 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=75.5 pTM=0.533 ipTM=0.205 tol=3.79
2024-12-08 12:45:34,629 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=75.3 pTM=0.539 ipTM=0.221 tol=3.59
2024-12-08 12:45:34,630 alphafold2_multimer_v3_model_5_seed_000 took 423.8s (30 recycles)
2024-12-08 12:45:35,053 reranking models by 'multimer' metric
2024-12-08 12:45:38,280 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 12:47:13,516 Relaxation took 98.5s
2024-12-08 12:47:13,516 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=75.3 pTM=0.539 ipTM=0.221
2024-12-08 12:48:29,480 Relaxation took 76.0s
2024-12-08 12:48:29,480 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=75.9 pTM=0.532 ipTM=0.205
2024-12-08 12:49:37,616 Relaxation took 68.1s
2024-12-08 12:49:37,616 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=76.7 pTM=0.527 ipTM=0.206
2024-12-08 12:50:54,236 Relaxation took 76.6s
2024-12-08 12:50:54,236 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=74.5 pTM=0.513 ipTM=0.175
2024-12-08 12:51:45,054 Relaxation took 50.8s
2024-12-08 12:51:45,054 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=75.8 pTM=0.496 ipTM=0.131
2024-12-08 12:51:46,574 Done