2024-12-08 12:07:45,849 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 12:07:46,173 Running on GPU
2024-12-08 12:07:48,914 Found 6 citations for tools or databases
2024-12-08 12:07:48,914 Query 1/1: SKP2_DDX11 (length 1394)
2024-12-08 12:07:49,282 Sleeping for 6s. Reason: PENDING
2024-12-08 12:07:55,550 Sleeping for 9s. Reason: RUNNING
2024-12-08 12:08:04,807 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:08:11,068 Sleeping for 8s. Reason: RUNNING
2024-12-08 12:08:19,334 Sleeping for 5s. Reason: RUNNING
2024-12-08 12:08:24,620 Sleeping for 8s. Reason: RUNNING
2024-12-08 12:08:32,881 Sleeping for 8s. Reason: RUNNING
2024-12-08 12:08:41,139 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:08:47,391 Sleeping for 8s. Reason: RUNNING
2024-12-08 12:08:55,654 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:09:02,072 Sleeping for 9s. Reason: RUNNING
2024-12-08 12:09:11,335 Sleeping for 10s. Reason: RUNNING
2024-12-08 12:09:21,605 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:09:27,875 Sleeping for 9s. Reason: RUNNING
2024-12-08 12:09:37,147 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:09:43,412 Sleeping for 9s. Reason: RUNNING
2024-12-08 12:09:52,672 Sleeping for 10s. Reason: RUNNING
2024-12-08 12:10:04,556 Sleeping for 6s. Reason: PENDING
2024-12-08 12:10:10,811 Sleeping for 8s. Reason: RUNNING
2024-12-08 12:10:19,078 Sleeping for 10s. Reason: RUNNING
2024-12-08 12:10:29,341 Sleeping for 10s. Reason: RUNNING
2024-12-08 12:10:39,604 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:10:45,863 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:10:52,120 Sleeping for 9s. Reason: RUNNING
2024-12-08 12:11:01,378 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:11:07,636 Sleeping for 8s. Reason: RUNNING
2024-12-08 12:11:16,055 Sleeping for 10s. Reason: RUNNING
2024-12-08 12:11:26,311 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:11:36,709 Setting max_seq=508, max_extra_seq=2048
2024-12-08 12:14:57,893 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=64.3 pTM=0.504 ipTM=0.186
2024-12-08 12:15:50,351 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=64.3 pTM=0.497 ipTM=0.187 tol=6.64
2024-12-08 12:16:42,968 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=64.1 pTM=0.49 ipTM=0.186 tol=3.21
2024-12-08 12:17:35,618 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=64.4 pTM=0.488 ipTM=0.185 tol=2.93
2024-12-08 12:18:28,324 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=64.2 pTM=0.487 ipTM=0.187 tol=2.47
2024-12-08 12:19:21,017 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=64.2 pTM=0.484 ipTM=0.18 tol=2.51
2024-12-08 12:20:13,744 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=64.3 pTM=0.486 ipTM=0.19 tol=2.6
2024-12-08 12:21:06,495 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=64.6 pTM=0.486 ipTM=0.182 tol=1.49
2024-12-08 12:21:59,226 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64.3 pTM=0.482 ipTM=0.184 tol=1.92
2024-12-08 12:22:52,038 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64.3 pTM=0.481 ipTM=0.172 tol=2.85
2024-12-08 12:23:44,884 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=64.7 pTM=0.475 ipTM=0.176 tol=15.5
2024-12-08 12:24:37,716 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=65.4 pTM=0.48 ipTM=0.209 tol=8.02
2024-12-08 12:25:30,557 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=64.9 pTM=0.474 ipTM=0.169 tol=7.58
2024-12-08 12:26:23,471 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=64.7 pTM=0.476 ipTM=0.167 tol=7.06
2024-12-08 12:27:16,388 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=65 pTM=0.475 ipTM=0.18 tol=8.63
2024-12-08 12:28:09,291 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=65.2 pTM=0.478 ipTM=0.195 tol=5.36
2024-12-08 12:29:02,226 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=64.9 pTM=0.473 ipTM=0.168 tol=5.49
2024-12-08 12:29:55,145 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=64.8 pTM=0.472 ipTM=0.169 tol=3.1
2024-12-08 12:30:48,045 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=65.2 pTM=0.479 ipTM=0.217 tol=5.03
2024-12-08 12:31:40,932 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=64.9 pTM=0.475 ipTM=0.169 tol=4.22
2024-12-08 12:32:33,820 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=64.6 pTM=0.475 ipTM=0.172 tol=6.58
2024-12-08 12:33:26,695 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64.7 pTM=0.472 ipTM=0.168 tol=2.9
2024-12-08 12:34:19,547 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64.9 pTM=0.474 ipTM=0.17 tol=4.79
2024-12-08 12:35:12,420 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=65.1 pTM=0.48 ipTM=0.224 tol=6.71
2024-12-08 12:36:05,301 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=65.1 pTM=0.474 ipTM=0.17 tol=3.72
2024-12-08 12:36:58,111 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.7 pTM=0.472 ipTM=0.171 tol=5.05
2024-12-08 12:37:50,913 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=65.1 pTM=0.477 ipTM=0.193 tol=5.43
2024-12-08 12:38:43,717 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=64.9 pTM=0.474 ipTM=0.17 tol=3.07
2024-12-08 12:39:36,522 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=64.8 pTM=0.476 ipTM=0.174 tol=2.92
2024-12-08 12:40:29,313 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=65.1 pTM=0.487 ipTM=0.256 tol=6.8
2024-12-08 12:41:22,156 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=64.8 pTM=0.473 ipTM=0.17 tol=5.69
2024-12-08 12:41:22,157 alphafold2_multimer_v3_model_1_seed_000 took 1780.3s (30 recycles)
2024-12-08 12:42:15,998 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=65.7 pTM=0.521 ipTM=0.235
2024-12-08 12:43:08,785 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=66.5 pTM=0.521 ipTM=0.185 tol=5.82
2024-12-08 12:44:01,603 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.2 pTM=0.509 ipTM=0.167 tol=3.59
2024-12-08 12:44:54,451 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=66.2 pTM=0.501 ipTM=0.164 tol=3.2
2024-12-08 12:45:47,343 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=66.2 pTM=0.502 ipTM=0.161 tol=5.38
2024-12-08 12:46:40,208 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=66.2 pTM=0.5 ipTM=0.163 tol=4.58
2024-12-08 12:47:33,108 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=66.4 pTM=0.501 ipTM=0.162 tol=5.14
2024-12-08 12:48:26,010 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=66.5 pTM=0.5 ipTM=0.163 tol=4.49
2024-12-08 12:49:18,869 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=66.3 pTM=0.5 ipTM=0.162 tol=3.13
2024-12-08 12:50:11,698 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=66.2 pTM=0.499 ipTM=0.163 tol=4.09
2024-12-08 12:51:04,585 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=66.4 pTM=0.5 ipTM=0.162 tol=1.97
2024-12-08 12:51:57,416 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=66.4 pTM=0.5 ipTM=0.162 tol=2.93
2024-12-08 12:52:50,264 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=66.6 pTM=0.498 ipTM=0.162 tol=1.98
2024-12-08 12:53:43,109 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=66.2 pTM=0.495 ipTM=0.162 tol=1.81
2024-12-08 12:54:36,024 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=66.4 pTM=0.496 ipTM=0.161 tol=1.96
2024-12-08 12:55:28,927 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=66.1 pTM=0.494 ipTM=0.161 tol=1.48
2024-12-08 12:56:21,811 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=66.1 pTM=0.493 ipTM=0.16 tol=0.985
2024-12-08 12:57:14,670 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=66 pTM=0.491 ipTM=0.161 tol=1.92
2024-12-08 12:58:07,570 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=66.1 pTM=0.491 ipTM=0.159 tol=1.84
2024-12-08 12:59:00,443 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=66.2 pTM=0.494 ipTM=0.16 tol=1.66
2024-12-08 12:59:53,326 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=66.2 pTM=0.493 ipTM=0.161 tol=2.67
2024-12-08 13:00:46,194 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=66.2 pTM=0.492 ipTM=0.161 tol=1.31
2024-12-08 13:01:39,085 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=66.3 pTM=0.496 ipTM=0.16 tol=3.01
2024-12-08 13:02:31,952 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=66.2 pTM=0.496 ipTM=0.162 tol=3.09
2024-12-08 13:03:24,847 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=66.2 pTM=0.495 ipTM=0.162 tol=1.85
2024-12-08 13:04:17,731 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=66.1 pTM=0.493 ipTM=0.161 tol=1.98
2024-12-08 13:05:10,642 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=66.4 pTM=0.495 ipTM=0.161 tol=1.69
2024-12-08 13:06:03,511 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=66.2 pTM=0.494 ipTM=0.161 tol=1.63
2024-12-08 13:06:56,356 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=66.2 pTM=0.494 ipTM=0.161 tol=2.82
2024-12-08 13:07:49,237 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=66.3 pTM=0.497 ipTM=0.159 tol=3.1
2024-12-08 13:08:42,183 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=66.2 pTM=0.493 ipTM=0.161 tol=3.1
2024-12-08 13:08:42,184 alphafold2_multimer_v3_model_2_seed_000 took 1638.9s (30 recycles)
2024-12-08 13:09:36,245 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=65.1 pTM=0.501 ipTM=0.164
2024-12-08 13:10:29,092 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=65.6 pTM=0.516 ipTM=0.174 tol=13.3
2024-12-08 13:11:21,939 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=65.4 pTM=0.509 ipTM=0.158 tol=5.95
2024-12-08 13:12:14,768 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=65.7 pTM=0.514 ipTM=0.171 tol=4.9
2024-12-08 13:13:07,640 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=65.8 pTM=0.517 ipTM=0.173 tol=3.81
2024-12-08 13:14:00,501 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=65.6 pTM=0.515 ipTM=0.177 tol=2.64
2024-12-08 13:14:53,333 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=65.9 pTM=0.518 ipTM=0.179 tol=1.73
2024-12-08 13:15:46,130 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=65.9 pTM=0.517 ipTM=0.178 tol=1.77
2024-12-08 13:16:38,943 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=65.7 pTM=0.516 ipTM=0.181 tol=3.2
2024-12-08 13:17:31,760 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=65.8 pTM=0.517 ipTM=0.184 tol=3.14
2024-12-08 13:18:24,515 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=65.9 pTM=0.518 ipTM=0.19 tol=2.17
2024-12-08 13:19:17,273 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=65.9 pTM=0.518 ipTM=0.183 tol=3.2
2024-12-08 13:20:10,054 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=66.1 pTM=0.519 ipTM=0.227 tol=3.5
2024-12-08 13:21:02,825 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=65.9 pTM=0.517 ipTM=0.197 tol=3.23
2024-12-08 13:21:55,616 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=65.8 pTM=0.514 ipTM=0.185 tol=3.57
2024-12-08 13:22:48,342 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=65.7 pTM=0.516 ipTM=0.183 tol=5.13
2024-12-08 13:23:41,194 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=65.6 pTM=0.51 ipTM=0.178 tol=3.78
2024-12-08 13:24:34,023 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=65.6 pTM=0.512 ipTM=0.187 tol=4.16
2024-12-08 13:25:26,831 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=65.9 pTM=0.518 ipTM=0.228 tol=2.71
2024-12-08 13:26:19,692 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=65.8 pTM=0.516 ipTM=0.197 tol=2.91
2024-12-08 13:27:12,538 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=65.8 pTM=0.516 ipTM=0.184 tol=1.86
2024-12-08 13:28:05,361 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=65.7 pTM=0.513 ipTM=0.181 tol=2.17
2024-12-08 13:28:58,162 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=65.8 pTM=0.515 ipTM=0.183 tol=1.59
2024-12-08 13:29:50,999 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=65.6 pTM=0.511 ipTM=0.178 tol=2.77
2024-12-08 13:30:43,815 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=65.7 pTM=0.514 ipTM=0.183 tol=1.7
2024-12-08 13:31:36,543 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=65.6 pTM=0.51 ipTM=0.178 tol=1.67
2024-12-08 13:32:29,254 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=65.8 pTM=0.51 ipTM=0.178 tol=1.59
2024-12-08 13:33:22,022 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=65.6 pTM=0.51 ipTM=0.176 tol=2.51
2024-12-08 13:34:14,843 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=65.7 pTM=0.511 ipTM=0.175 tol=1.77
2024-12-08 13:35:07,661 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=65.4 pTM=0.51 ipTM=0.175 tol=2.68
2024-12-08 13:36:00,467 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=65.4 pTM=0.507 ipTM=0.171 tol=2.98
2024-12-08 13:36:00,468 alphafold2_multimer_v3_model_3_seed_000 took 1637.1s (30 recycles)
2024-12-08 13:36:54,322 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=64.8 pTM=0.515 ipTM=0.201
2024-12-08 13:37:47,109 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=64.8 pTM=0.506 ipTM=0.17 tol=6.87
2024-12-08 13:38:39,984 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=64.6 pTM=0.5 ipTM=0.191 tol=4.91
2024-12-08 13:39:32,863 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=64.6 pTM=0.499 ipTM=0.163 tol=5.18
2024-12-08 13:40:25,710 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64.6 pTM=0.5 ipTM=0.167 tol=2.48
2024-12-08 13:41:18,548 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=64.6 pTM=0.497 ipTM=0.166 tol=3.46
2024-12-08 13:42:11,382 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=64.6 pTM=0.496 ipTM=0.167 tol=2.58
2024-12-08 13:43:04,214 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64.7 pTM=0.497 ipTM=0.165 tol=2.55
2024-12-08 13:43:57,049 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=64.6 pTM=0.496 ipTM=0.166 tol=4.1
2024-12-08 13:44:49,929 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=64.8 pTM=0.499 ipTM=0.165 tol=2.98
2024-12-08 13:45:42,823 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=64.8 pTM=0.496 ipTM=0.164 tol=1.67
2024-12-08 13:46:35,681 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=64.9 pTM=0.497 ipTM=0.163 tol=2.47
2024-12-08 13:47:28,571 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=64.8 pTM=0.494 ipTM=0.164 tol=2.71
2024-12-08 13:48:21,464 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=64.6 pTM=0.494 ipTM=0.163 tol=2.28
2024-12-08 13:49:14,371 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=64.7 pTM=0.495 ipTM=0.164 tol=2.22
2024-12-08 13:50:07,289 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=64.5 pTM=0.493 ipTM=0.165 tol=3.23
2024-12-08 13:51:00,212 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=64.6 pTM=0.494 ipTM=0.164 tol=3.41
2024-12-08 13:51:53,140 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=64.5 pTM=0.492 ipTM=0.165 tol=2.26
2024-12-08 13:52:46,055 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=64.7 pTM=0.494 ipTM=0.164 tol=2.37
2024-12-08 13:53:38,934 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64.3 pTM=0.493 ipTM=0.167 tol=3.64
2024-12-08 13:54:31,774 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.7 pTM=0.494 ipTM=0.163 tol=2.18
2024-12-08 13:55:24,620 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=64.6 pTM=0.493 ipTM=0.164 tol=3.04
2024-12-08 13:56:17,448 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=64.6 pTM=0.495 ipTM=0.162 tol=1.98
2024-12-08 13:57:10,271 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=64.6 pTM=0.494 ipTM=0.164 tol=2.12
2024-12-08 13:58:03,092 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=64.5 pTM=0.496 ipTM=0.164 tol=2.1
2024-12-08 13:58:55,909 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=64.6 pTM=0.492 ipTM=0.163 tol=2.95
2024-12-08 13:59:48,736 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=64.7 pTM=0.494 ipTM=0.161 tol=2.62
2024-12-08 14:00:41,538 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=64.6 pTM=0.493 ipTM=0.162 tol=2.27
2024-12-08 14:01:34,352 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=64.6 pTM=0.494 ipTM=0.162 tol=1.56
2024-12-08 14:02:27,131 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=64.8 pTM=0.498 ipTM=0.164 tol=3.15
2024-12-08 14:03:19,893 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=64.6 pTM=0.495 ipTM=0.162 tol=3.71
2024-12-08 14:03:19,894 alphafold2_multimer_v3_model_4_seed_000 took 1638.3s (30 recycles)
2024-12-08 14:04:13,717 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=63.8 pTM=0.5 ipTM=0.18
2024-12-08 14:05:06,367 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=65 pTM=0.523 ipTM=0.211 tol=5.39
2024-12-08 14:05:59,057 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=65.2 pTM=0.509 ipTM=0.173 tol=4.94
2024-12-08 14:06:51,722 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=65.2 pTM=0.507 ipTM=0.171 tol=5.25
2024-12-08 14:07:44,420 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=65.6 pTM=0.509 ipTM=0.167 tol=4.39
2024-12-08 14:08:37,140 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=65.5 pTM=0.507 ipTM=0.169 tol=3.14
2024-12-08 14:09:29,828 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=65.6 pTM=0.508 ipTM=0.17 tol=3.09
2024-12-08 14:10:22,496 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=65.5 pTM=0.507 ipTM=0.17 tol=3.52
2024-12-08 14:11:15,132 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=65.4 pTM=0.509 ipTM=0.171 tol=5.38
2024-12-08 14:12:07,844 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=65.6 pTM=0.506 ipTM=0.168 tol=3.32
2024-12-08 14:13:00,628 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=65.6 pTM=0.509 ipTM=0.17 tol=4.19
2024-12-08 14:13:53,427 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=65.6 pTM=0.509 ipTM=0.17 tol=2.59
2024-12-08 14:14:46,229 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=65.6 pTM=0.507 ipTM=0.17 tol=2.39
2024-12-08 14:15:39,035 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=65.4 pTM=0.504 ipTM=0.171 tol=2.85
2024-12-08 14:16:31,825 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=65.6 pTM=0.505 ipTM=0.169 tol=2.43
2024-12-08 14:17:24,616 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=65.4 pTM=0.505 ipTM=0.169 tol=2.75
2024-12-08 14:18:17,404 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=65.5 pTM=0.505 ipTM=0.167 tol=3.04
2024-12-08 14:19:10,175 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=65.4 pTM=0.505 ipTM=0.167 tol=2.34
2024-12-08 14:20:02,950 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=65.4 pTM=0.505 ipTM=0.168 tol=2.84
2024-12-08 14:20:55,706 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=65.2 pTM=0.504 ipTM=0.168 tol=3.44
2024-12-08 14:21:48,515 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=65.3 pTM=0.504 ipTM=0.169 tol=2.16
2024-12-08 14:22:41,325 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=65.2 pTM=0.502 ipTM=0.169 tol=2.97
2024-12-08 14:23:34,151 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=65.3 pTM=0.506 ipTM=0.17 tol=3.67
2024-12-08 14:24:26,933 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=65.2 pTM=0.505 ipTM=0.172 tol=3.87
2024-12-08 14:25:19,731 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=65.2 pTM=0.503 ipTM=0.172 tol=2.08
2024-12-08 14:26:12,510 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=65.3 pTM=0.501 ipTM=0.169 tol=2.59
2024-12-08 14:27:05,309 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=65.4 pTM=0.5 ipTM=0.169 tol=3.49
2024-12-08 14:27:58,113 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=65.3 pTM=0.502 ipTM=0.17 tol=2.64
2024-12-08 14:28:50,959 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=65.2 pTM=0.503 ipTM=0.169 tol=2.76
2024-12-08 14:29:43,759 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=65.3 pTM=0.505 ipTM=0.168 tol=2.41
2024-12-08 14:30:36,528 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=65.1 pTM=0.501 ipTM=0.168 tol=1.52
2024-12-08 14:30:36,529 alphafold2_multimer_v3_model_5_seed_000 took 1635.5s (30 recycles)
2024-12-08 14:30:37,688 reranking models by 'multimer' metric
2024-12-08 14:30:40,967 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 14:33:47,689 Relaxation took 190.0s
2024-12-08 14:33:47,689 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=65.4 pTM=0.507 ipTM=0.171
2024-12-08 14:36:33,943 Relaxation took 166.3s
2024-12-08 14:36:33,944 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=65.1 pTM=0.501 ipTM=0.168
2024-12-08 14:38:55,916 Relaxation took 142.0s
2024-12-08 14:38:55,916 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=64.8 pTM=0.473 ipTM=0.17
2024-12-08 14:41:54,931 Relaxation took 179.0s
2024-12-08 14:41:54,931 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=64.6 pTM=0.495 ipTM=0.162
2024-12-08 14:45:02,272 Relaxation took 187.3s
2024-12-08 14:45:02,272 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=66.2 pTM=0.493 ipTM=0.161
2024-12-08 14:45:05,321 Done