2024-12-08 12:10:58,288 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 12:10:59,819 Running on GPU
2024-12-08 12:11:03,053 Found 6 citations for tools or databases
2024-12-08 12:11:03,053 Query 1/1: SKP2_KIRREL (length 1181)
2024-12-08 12:11:03,339 Sleeping for 9s. Reason: PENDING
2024-12-08 12:11:12,607 Sleeping for 10s. Reason: RUNNING
2024-12-08 12:11:22,872 Sleeping for 7s. Reason: RUNNING
2024-12-08 12:11:30,275 Sleeping for 5s. Reason: RUNNING
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2024-12-08 12:11:56,052 Sleeping for 8s. Reason: RUNNING
2024-12-08 12:12:04,309 Sleeping for 5s. Reason: RUNNING
2024-12-08 12:12:09,565 Sleeping for 8s. Reason: RUNNING
2024-12-08 12:12:17,825 Sleeping for 5s. Reason: RUNNING
2024-12-08 12:12:23,079 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:12:29,333 Sleeping for 7s. Reason: RUNNING
2024-12-08 12:12:36,595 Sleeping for 5s. Reason: RUNNING
2024-12-08 12:12:41,850 Sleeping for 8s. Reason: RUNNING
2024-12-08 12:12:50,110 Sleeping for 10s. Reason: RUNNING
2024-12-08 12:13:00,373 Sleeping for 7s. Reason: RUNNING
2024-12-08 12:13:07,636 Sleeping for 10s. Reason: RUNNING
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2024-12-08 12:13:32,417 Sleeping for 9s. Reason: RUNNING
2024-12-08 12:13:41,687 Sleeping for 9s. Reason: RUNNING
2024-12-08 12:13:50,942 Sleeping for 9s. Reason: RUNNING
2024-12-08 12:14:00,205 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:14:06,464 Sleeping for 8s. Reason: RUNNING
2024-12-08 12:14:14,724 Sleeping for 8s. Reason: RUNNING
2024-12-08 12:14:22,980 Sleeping for 10s. Reason: RUNNING
2024-12-08 12:14:33,247 Sleeping for 9s. Reason: RUNNING
2024-12-08 12:14:42,510 Sleeping for 8s. Reason: RUNNING
2024-12-08 12:14:50,769 Sleeping for 10s. Reason: RUNNING
2024-12-08 12:15:01,028 Sleeping for 10s. Reason: RUNNING
2024-12-08 12:15:11,287 Sleeping for 5s. Reason: RUNNING
2024-12-08 12:15:16,538 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:15:22,800 Sleeping for 10s. Reason: RUNNING
2024-12-08 12:15:33,059 Sleeping for 7s. Reason: RUNNING
2024-12-08 12:15:40,316 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:15:46,574 Sleeping for 5s. Reason: RUNNING
2024-12-08 12:15:51,832 Sleeping for 9s. Reason: RUNNING
2024-12-08 12:16:01,092 Sleeping for 8s. Reason: RUNNING
2024-12-08 12:16:09,367 Sleeping for 10s. Reason: RUNNING
2024-12-08 12:16:20,725 Sleeping for 5s. Reason: PENDING
2024-12-08 12:16:25,985 Sleeping for 10s. Reason: PENDING
2024-12-08 12:16:36,258 Sleeping for 7s. Reason: RUNNING
2024-12-08 12:16:43,521 Sleeping for 8s. Reason: RUNNING
2024-12-08 12:16:51,775 Sleeping for 5s. Reason: RUNNING
2024-12-08 12:16:57,032 Sleeping for 9s. Reason: RUNNING
2024-12-08 12:17:06,292 Sleeping for 5s. Reason: RUNNING
2024-12-08 12:17:11,543 Sleeping for 5s. Reason: RUNNING
2024-12-08 12:17:16,802 Sleeping for 8s. Reason: RUNNING
2024-12-08 12:17:25,057 Sleeping for 8s. Reason: RUNNING
2024-12-08 12:17:33,312 Sleeping for 9s. Reason: RUNNING
2024-12-08 12:17:42,575 Sleeping for 5s. Reason: RUNNING
2024-12-08 12:17:47,832 Sleeping for 5s. Reason: RUNNING
2024-12-08 12:17:53,085 Sleeping for 10s. Reason: RUNNING
2024-12-08 12:18:03,344 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:18:09,613 Sleeping for 10s. Reason: RUNNING
2024-12-08 12:18:19,878 Sleeping for 10s. Reason: RUNNING
2024-12-08 12:18:30,142 Sleeping for 9s. Reason: RUNNING
2024-12-08 12:18:39,407 Sleeping for 7s. Reason: RUNNING
2024-12-08 12:18:46,665 Sleeping for 8s. Reason: RUNNING
2024-12-08 12:18:59,103 Setting max_seq=508, max_extra_seq=2048
2024-12-08 12:23:48,209 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=66.9 pTM=0.364 ipTM=0.164
2024-12-08 12:24:25,105 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=67.8 pTM=0.363 ipTM=0.149 tol=17.3
2024-12-08 12:25:02,064 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=68.4 pTM=0.362 ipTM=0.162 tol=7.45
2024-12-08 12:25:39,098 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=68.3 pTM=0.36 ipTM=0.17 tol=7.38
2024-12-08 12:26:16,189 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=68.1 pTM=0.359 ipTM=0.162 tol=9.55
2024-12-08 12:26:53,290 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=68.3 pTM=0.36 ipTM=0.177 tol=9.58
2024-12-08 12:27:30,354 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=68.4 pTM=0.36 ipTM=0.181 tol=10.7
2024-12-08 12:28:07,470 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=68.2 pTM=0.359 ipTM=0.179 tol=9.23
2024-12-08 12:28:44,554 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=68.2 pTM=0.36 ipTM=0.188 tol=9.76
2024-12-08 12:29:21,646 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=68.1 pTM=0.359 ipTM=0.19 tol=8.25
2024-12-08 12:29:58,710 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=68.3 pTM=0.36 ipTM=0.186 tol=6.6
2024-12-08 12:30:35,790 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=68.2 pTM=0.358 ipTM=0.181 tol=8.44
2024-12-08 12:31:12,851 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=68.1 pTM=0.36 ipTM=0.184 tol=6.32
2024-12-08 12:31:49,935 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67.9 pTM=0.358 ipTM=0.18 tol=3.4
2024-12-08 12:32:26,991 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=68.2 pTM=0.36 ipTM=0.181 tol=4.71
2024-12-08 12:33:04,086 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=68.2 pTM=0.359 ipTM=0.178 tol=6.67
2024-12-08 12:33:41,136 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=68.1 pTM=0.36 ipTM=0.183 tol=5.24
2024-12-08 12:34:18,245 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=68.2 pTM=0.358 ipTM=0.181 tol=5.34
2024-12-08 12:34:55,323 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=68.4 pTM=0.36 ipTM=0.182 tol=5.79
2024-12-08 12:35:32,423 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=68.1 pTM=0.359 ipTM=0.178 tol=9.5
2024-12-08 12:36:09,506 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=68.1 pTM=0.358 ipTM=0.173 tol=10.2
2024-12-08 12:36:46,634 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=68.3 pTM=0.359 ipTM=0.177 tol=11.6
2024-12-08 12:37:23,718 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=68.4 pTM=0.36 ipTM=0.178 tol=7.16
2024-12-08 12:38:00,824 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=68.4 pTM=0.359 ipTM=0.176 tol=3.41
2024-12-08 12:38:37,889 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=68.1 pTM=0.359 ipTM=0.178 tol=4.5
2024-12-08 12:39:14,990 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=68.1 pTM=0.358 ipTM=0.177 tol=9.54
2024-12-08 12:39:52,066 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=68.1 pTM=0.359 ipTM=0.18 tol=5.56
2024-12-08 12:40:29,149 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=68.1 pTM=0.358 ipTM=0.168 tol=3.16
2024-12-08 12:41:06,215 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=68.2 pTM=0.36 ipTM=0.177 tol=5.2
2024-12-08 12:41:43,323 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=68.2 pTM=0.359 ipTM=0.182 tol=6.17
2024-12-08 12:42:20,398 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=68.1 pTM=0.358 ipTM=0.174 tol=7.13
2024-12-08 12:42:20,399 alphafold2_multimer_v3_model_1_seed_000 took 1380.2s (30 recycles)
2024-12-08 12:42:58,789 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=66.6 pTM=0.37 ipTM=0.155
2024-12-08 12:43:36,018 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=67.8 pTM=0.369 ipTM=0.154 tol=13.9
2024-12-08 12:44:13,228 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=68.4 pTM=0.369 ipTM=0.147 tol=9.7
2024-12-08 12:44:50,420 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=68.6 pTM=0.368 ipTM=0.154 tol=7.18
2024-12-08 12:45:27,654 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=68.8 pTM=0.366 ipTM=0.147 tol=7.13
2024-12-08 12:46:04,848 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=68.7 pTM=0.368 ipTM=0.156 tol=3.78
2024-12-08 12:46:42,054 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=68.9 pTM=0.367 ipTM=0.147 tol=5.34
2024-12-08 12:47:19,244 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=68.9 pTM=0.369 ipTM=0.155 tol=4.44
2024-12-08 12:47:56,474 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=68.9 pTM=0.366 ipTM=0.147 tol=3.3
2024-12-08 12:48:33,658 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=68.8 pTM=0.369 ipTM=0.155 tol=4.97
2024-12-08 12:49:10,874 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=69.1 pTM=0.368 ipTM=0.148 tol=4.61
2024-12-08 12:49:48,090 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=68.9 pTM=0.368 ipTM=0.156 tol=4.87
2024-12-08 12:50:25,317 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=68.9 pTM=0.367 ipTM=0.147 tol=5.21
2024-12-08 12:51:02,523 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=68.7 pTM=0.369 ipTM=0.156 tol=5.6
2024-12-08 12:51:39,769 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=68.8 pTM=0.366 ipTM=0.147 tol=4.3
2024-12-08 12:52:16,984 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=68.8 pTM=0.37 ipTM=0.158 tol=4.19
2024-12-08 12:52:54,220 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=68.8 pTM=0.366 ipTM=0.148 tol=4.58
2024-12-08 12:53:31,454 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=68.8 pTM=0.368 ipTM=0.155 tol=6.55
2024-12-08 12:54:08,709 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=68.9 pTM=0.368 ipTM=0.149 tol=4.56
2024-12-08 12:54:45,924 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=68.9 pTM=0.37 ipTM=0.155 tol=4.79
2024-12-08 12:55:23,155 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=68.8 pTM=0.367 ipTM=0.148 tol=4.99
2024-12-08 12:56:00,334 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=68.8 pTM=0.37 ipTM=0.158 tol=7.64
2024-12-08 12:56:37,529 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=68.9 pTM=0.367 ipTM=0.15 tol=4.43
2024-12-08 12:57:14,716 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=68.9 pTM=0.372 ipTM=0.157 tol=3.42
2024-12-08 12:57:51,941 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=68.9 pTM=0.366 ipTM=0.146 tol=5.36
2024-12-08 12:58:29,143 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=68.8 pTM=0.37 ipTM=0.156 tol=5.94
2024-12-08 12:59:06,369 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=68.9 pTM=0.366 ipTM=0.147 tol=4.31
2024-12-08 12:59:43,565 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=68.7 pTM=0.369 ipTM=0.158 tol=3.87
2024-12-08 13:00:20,791 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=68.8 pTM=0.366 ipTM=0.147 tol=4.83
2024-12-08 13:00:58,016 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=68.8 pTM=0.369 ipTM=0.155 tol=4.15
2024-12-08 13:01:35,250 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=68.8 pTM=0.366 ipTM=0.15 tol=3.66
2024-12-08 13:01:35,251 alphafold2_multimer_v3_model_2_seed_000 took 1153.6s (30 recycles)
2024-12-08 13:02:13,701 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=66.1 pTM=0.364 ipTM=0.148
2024-12-08 13:02:50,949 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.2 pTM=0.373 ipTM=0.177 tol=31
2024-12-08 13:03:28,214 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=66.8 pTM=0.373 ipTM=0.223 tol=8.46
2024-12-08 13:04:05,398 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=66.8 pTM=0.381 ipTM=0.21 tol=6.22
2024-12-08 13:04:42,617 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=67.1 pTM=0.382 ipTM=0.244 tol=4.54
2024-12-08 13:05:19,805 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=67.1 pTM=0.385 ipTM=0.227 tol=4.65
2024-12-08 13:05:57,009 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=67.2 pTM=0.383 ipTM=0.214 tol=6.15
2024-12-08 13:06:34,208 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=67.1 pTM=0.386 ipTM=0.214 tol=2.4
2024-12-08 13:07:11,435 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=67.1 pTM=0.38 ipTM=0.217 tol=2.93
2024-12-08 13:07:48,634 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=67.1 pTM=0.383 ipTM=0.22 tol=3.56
2024-12-08 13:08:25,893 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=67.2 pTM=0.377 ipTM=0.202 tol=2.95
2024-12-08 13:09:03,105 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=67.1 pTM=0.381 ipTM=0.185 tol=2.38
2024-12-08 13:09:40,309 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=67.1 pTM=0.38 ipTM=0.193 tol=3.73
2024-12-08 13:10:17,510 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=66.9 pTM=0.382 ipTM=0.2 tol=3.15
2024-12-08 13:10:54,735 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=67 pTM=0.379 ipTM=0.201 tol=2.46
2024-12-08 13:11:31,937 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=67 pTM=0.381 ipTM=0.204 tol=2.73
2024-12-08 13:12:09,165 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=66.9 pTM=0.378 ipTM=0.195 tol=3.01
2024-12-08 13:12:46,381 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=66.9 pTM=0.382 ipTM=0.197 tol=3.4
2024-12-08 13:13:23,603 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=66.9 pTM=0.382 ipTM=0.204 tol=3.65
2024-12-08 13:14:00,804 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=67 pTM=0.384 ipTM=0.203 tol=2.95
2024-12-08 13:14:38,016 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=66.8 pTM=0.381 ipTM=0.187 tol=2.49
2024-12-08 13:15:15,219 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=66.9 pTM=0.382 ipTM=0.191 tol=2.34
2024-12-08 13:15:52,418 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=66.9 pTM=0.382 ipTM=0.173 tol=4.36
2024-12-08 13:16:29,625 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67 pTM=0.384 ipTM=0.182 tol=2.19
2024-12-08 13:17:06,831 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=66.9 pTM=0.381 ipTM=0.187 tol=1.68
2024-12-08 13:17:44,052 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67 pTM=0.381 ipTM=0.172 tol=2.53
2024-12-08 13:18:21,288 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=66.9 pTM=0.376 ipTM=0.189 tol=2.75
2024-12-08 13:18:58,512 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=66.8 pTM=0.376 ipTM=0.178 tol=2.61
2024-12-08 13:19:35,742 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=66.9 pTM=0.374 ipTM=0.168 tol=2.27
2024-12-08 13:20:12,978 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67 pTM=0.377 ipTM=0.168 tol=3.01
2024-12-08 13:20:50,205 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=66.9 pTM=0.378 ipTM=0.166 tol=2.84
2024-12-08 13:20:50,206 alphafold2_multimer_v3_model_3_seed_000 took 1153.7s (30 recycles)
2024-12-08 13:21:28,668 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=64.9 pTM=0.37 ipTM=0.157
2024-12-08 13:22:06,005 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=66.5 pTM=0.367 ipTM=0.18 tol=21.6
2024-12-08 13:22:43,293 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=66.8 pTM=0.365 ipTM=0.204 tol=13.6
2024-12-08 13:23:20,620 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=66.8 pTM=0.365 ipTM=0.202 tol=6.43
2024-12-08 13:23:57,940 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=67.2 pTM=0.366 ipTM=0.209 tol=7.8
2024-12-08 13:24:35,280 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=67.2 pTM=0.366 ipTM=0.225 tol=5.13
2024-12-08 13:25:12,585 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=67.3 pTM=0.366 ipTM=0.219 tol=6.64
2024-12-08 13:25:49,913 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=67.4 pTM=0.367 ipTM=0.229 tol=5.29
2024-12-08 13:26:27,236 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=67.2 pTM=0.365 ipTM=0.214 tol=5.6
2024-12-08 13:27:04,327 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=66.2 pTM=0.483 ipTM=0.477 tol=24.8
2024-12-08 13:27:41,596 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=67.3 pTM=0.374 ipTM=0.2 tol=8.43
2024-12-08 13:28:18,876 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=67.4 pTM=0.368 ipTM=0.21 tol=5.14
2024-12-08 13:28:56,157 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=67.5 pTM=0.367 ipTM=0.213 tol=4.95
2024-12-08 13:29:33,478 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=67.2 pTM=0.366 ipTM=0.193 tol=5.36
2024-12-08 13:30:10,813 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=67.4 pTM=0.365 ipTM=0.185 tol=4.31
2024-12-08 13:30:48,151 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=67.2 pTM=0.365 ipTM=0.18 tol=6.31
2024-12-08 13:31:25,462 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=67.1 pTM=0.366 ipTM=0.198 tol=7.59
2024-12-08 13:32:02,764 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=67.2 pTM=0.366 ipTM=0.211 tol=8.19
2024-12-08 13:32:40,095 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=67.2 pTM=0.367 ipTM=0.203 tol=3.99
2024-12-08 13:33:17,416 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=67.4 pTM=0.367 ipTM=0.193 tol=3.29
2024-12-08 13:33:54,741 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=67.2 pTM=0.367 ipTM=0.199 tol=4.06
2024-12-08 13:34:32,053 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=67.2 pTM=0.366 ipTM=0.208 tol=5.22
2024-12-08 13:35:09,367 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=67.4 pTM=0.365 ipTM=0.181 tol=5.44
2024-12-08 13:35:46,675 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=67.4 pTM=0.367 ipTM=0.173 tol=2.8
2024-12-08 13:36:23,969 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=67.4 pTM=0.366 ipTM=0.169 tol=2.2
2024-12-08 13:37:01,261 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=67.2 pTM=0.365 ipTM=0.17 tol=1.42
2024-12-08 13:37:38,552 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=67.3 pTM=0.365 ipTM=0.169 tol=3.44
2024-12-08 13:38:15,827 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=67.2 pTM=0.365 ipTM=0.166 tol=2.32
2024-12-08 13:38:53,115 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=67.2 pTM=0.365 ipTM=0.168 tol=1.76
2024-12-08 13:39:30,406 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=67.3 pTM=0.366 ipTM=0.163 tol=3.8
2024-12-08 13:40:07,700 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=67.2 pTM=0.365 ipTM=0.164 tol=3.44
2024-12-08 13:40:07,701 alphafold2_multimer_v3_model_4_seed_000 took 1156.3s (30 recycles)
2024-12-08 13:40:46,212 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=65.7 pTM=0.36 ipTM=0.134
2024-12-08 13:41:23,541 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.1 pTM=0.36 ipTM=0.136 tol=11
2024-12-08 13:42:00,864 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=66.6 pTM=0.362 ipTM=0.159 tol=9.65
2024-12-08 13:42:38,158 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=66.8 pTM=0.364 ipTM=0.169 tol=8.47
2024-12-08 13:43:15,413 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=67 pTM=0.369 ipTM=0.162 tol=5.07
2024-12-08 13:43:52,710 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=67.2 pTM=0.365 ipTM=0.169 tol=5.77
2024-12-08 13:44:29,993 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=67.2 pTM=0.366 ipTM=0.177 tol=2.85
2024-12-08 13:45:07,244 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=67.6 pTM=0.373 ipTM=0.183 tol=2.09
2024-12-08 13:45:44,510 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=67.8 pTM=0.375 ipTM=0.188 tol=2.76
2024-12-08 13:46:21,771 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67.6 pTM=0.375 ipTM=0.211 tol=2.65
2024-12-08 13:46:59,039 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=67.5 pTM=0.373 ipTM=0.226 tol=2.11
2024-12-08 13:47:36,312 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67.4 pTM=0.371 ipTM=0.215 tol=2.94
2024-12-08 13:48:13,571 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=67.4 pTM=0.372 ipTM=0.201 tol=2.38
2024-12-08 13:48:50,829 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=67.3 pTM=0.371 ipTM=0.202 tol=1.7
2024-12-08 13:49:28,082 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=67.3 pTM=0.371 ipTM=0.206 tol=2.82
2024-12-08 13:50:05,351 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.2 pTM=0.37 ipTM=0.204 tol=2.08
2024-12-08 13:50:42,638 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67.4 pTM=0.369 ipTM=0.199 tol=3.33
2024-12-08 13:51:19,895 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=67.2 pTM=0.37 ipTM=0.208 tol=2.65
2024-12-08 13:51:57,162 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=67.2 pTM=0.369 ipTM=0.196 tol=2.57
2024-12-08 13:52:34,516 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=67.4 pTM=0.366 ipTM=0.185 tol=5.77
2024-12-08 13:53:11,815 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=67.1 pTM=0.37 ipTM=0.198 tol=6.61
2024-12-08 13:53:49,086 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=67.4 pTM=0.374 ipTM=0.206 tol=4.39
2024-12-08 13:54:26,381 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=67.6 pTM=0.374 ipTM=0.199 tol=2.41
2024-12-08 13:55:03,669 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=67.5 pTM=0.373 ipTM=0.187 tol=3.47
2024-12-08 13:55:40,946 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=67.3 pTM=0.371 ipTM=0.172 tol=3.44
2024-12-08 13:56:18,285 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=67.5 pTM=0.368 ipTM=0.17 tol=6.27
2024-12-08 13:56:55,584 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=67.3 pTM=0.37 ipTM=0.179 tol=4.55
2024-12-08 13:57:32,886 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=67.1 pTM=0.368 ipTM=0.173 tol=3.34
2024-12-08 13:58:10,187 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=67.2 pTM=0.368 ipTM=0.172 tol=4.91
2024-12-08 13:58:47,505 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=67.4 pTM=0.369 ipTM=0.171 tol=5.73
2024-12-08 13:59:24,817 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=67.2 pTM=0.37 ipTM=0.177 tol=4.07
2024-12-08 13:59:24,818 alphafold2_multimer_v3_model_5_seed_000 took 1155.9s (30 recycles)
2024-12-08 13:59:26,037 reranking models by 'multimer' metric
2024-12-08 13:59:29,449 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 14:01:24,503 Relaxation took 118.5s
2024-12-08 14:01:24,503 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67.2 pTM=0.37 ipTM=0.177
2024-12-08 14:03:24,417 Relaxation took 119.9s
2024-12-08 14:03:24,417 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=68.1 pTM=0.358 ipTM=0.174
2024-12-08 14:05:19,374 Relaxation took 115.0s
2024-12-08 14:05:19,374 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=66.9 pTM=0.378 ipTM=0.166
2024-12-08 14:07:16,501 Relaxation took 117.1s
2024-12-08 14:07:16,501 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=67.2 pTM=0.365 ipTM=0.164
2024-12-08 14:09:07,902 Relaxation took 111.4s
2024-12-08 14:09:07,902 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=68.8 pTM=0.366 ipTM=0.15
2024-12-08 14:09:10,766 Done