2024-12-08 12:16:35,177 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 12:16:35,489 Running on GPU
2024-12-08 12:16:39,040 Found 6 citations for tools or databases
2024-12-08 12:16:39,040 Query 1/1: SKP2_LGI1 (length 981)
2024-12-08 12:16:43,408 Setting max_seq=508, max_extra_seq=2048
2024-12-08 12:19:48,851 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=78.3 pTM=0.472 ipTM=0.193
2024-12-08 12:20:09,686 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=79.6 pTM=0.47 ipTM=0.188 tol=7.9
2024-12-08 12:20:30,619 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=80.2 pTM=0.494 ipTM=0.218 tol=8.42
2024-12-08 12:20:51,593 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=80.3 pTM=0.488 ipTM=0.214 tol=4.76
2024-12-08 12:21:12,609 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=80.8 pTM=0.516 ipTM=0.268 tol=1.74
2024-12-08 12:21:33,639 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=80.5 pTM=0.5 ipTM=0.242 tol=1.5
2024-12-08 12:21:54,711 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=80.4 pTM=0.492 ipTM=0.222 tol=2.02
2024-12-08 12:22:15,827 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=80.6 pTM=0.479 ipTM=0.194 tol=2.18
2024-12-08 12:22:36,935 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=80.5 pTM=0.489 ipTM=0.215 tol=2.35
2024-12-08 12:22:58,073 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=80.4 pTM=0.483 ipTM=0.198 tol=1.74
2024-12-08 12:23:19,216 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=80.3 pTM=0.476 ipTM=0.194 tol=2.02
2024-12-08 12:23:40,371 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=80.5 pTM=0.48 ipTM=0.197 tol=1.85
2024-12-08 12:24:01,496 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=80.7 pTM=0.511 ipTM=0.273 tol=2.2
2024-12-08 12:24:22,604 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=80.4 pTM=0.499 ipTM=0.25 tol=1.93
2024-12-08 12:24:43,727 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=80.4 pTM=0.496 ipTM=0.243 tol=2.05
2024-12-08 12:25:04,889 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=80.3 pTM=0.478 ipTM=0.286 tol=6.84
2024-12-08 12:25:26,029 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=80.4 pTM=0.484 ipTM=0.215 tol=3.15
2024-12-08 12:25:47,169 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=80.4 pTM=0.48 ipTM=0.198 tol=3.27
2024-12-08 12:26:08,323 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=80.3 pTM=0.48 ipTM=0.196 tol=3.74
2024-12-08 12:26:29,465 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=80.2 pTM=0.48 ipTM=0.196 tol=1.86
2024-12-08 12:26:50,602 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=80.3 pTM=0.491 ipTM=0.216 tol=1.67
2024-12-08 12:27:11,767 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=80.2 pTM=0.478 ipTM=0.188 tol=2.08
2024-12-08 12:27:32,920 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=80.3 pTM=0.476 ipTM=0.192 tol=2.4
2024-12-08 12:27:54,085 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=80.4 pTM=0.478 ipTM=0.184 tol=2.25
2024-12-08 12:28:15,210 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=80.2 pTM=0.472 ipTM=0.177 tol=2.21
2024-12-08 12:28:36,378 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=80.3 pTM=0.47 ipTM=0.171 tol=1.79
2024-12-08 12:28:57,510 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=80.6 pTM=0.488 ipTM=0.212 tol=1.95
2024-12-08 12:29:18,653 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=80.3 pTM=0.477 ipTM=0.185 tol=2.81
2024-12-08 12:29:39,807 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=80.3 pTM=0.477 ipTM=0.187 tol=2.56
2024-12-08 12:30:00,971 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=80.3 pTM=0.474 ipTM=0.176 tol=1.92
2024-12-08 12:30:22,096 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=80.4 pTM=0.484 ipTM=0.206 tol=2.87
2024-12-08 12:30:22,096 alphafold2_multimer_v3_model_1_seed_000 took 813.5s (30 recycles)
2024-12-08 12:30:43,729 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=78.9 pTM=0.514 ipTM=0.261
2024-12-08 12:31:04,849 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=79.9 pTM=0.481 ipTM=0.188 tol=6.58
2024-12-08 12:31:25,935 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=80.3 pTM=0.481 ipTM=0.174 tol=4.12
2024-12-08 12:31:47,038 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=80.6 pTM=0.482 ipTM=0.17 tol=5.15
2024-12-08 12:32:08,092 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=80.8 pTM=0.494 ipTM=0.233 tol=4.58
2024-12-08 12:32:29,187 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=80.7 pTM=0.488 ipTM=0.169 tol=3.23
2024-12-08 12:32:50,251 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=80.8 pTM=0.492 ipTM=0.185 tol=4.3
2024-12-08 12:33:11,344 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=81 pTM=0.489 ipTM=0.199 tol=1.65
2024-12-08 12:33:32,398 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=81 pTM=0.494 ipTM=0.202 tol=1.8
2024-12-08 12:33:53,494 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=81.1 pTM=0.489 ipTM=0.196 tol=1.89
2024-12-08 12:34:14,556 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=80.9 pTM=0.492 ipTM=0.188 tol=1.58
2024-12-08 12:34:35,672 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=81.1 pTM=0.485 ipTM=0.173 tol=1.43
2024-12-08 12:34:56,738 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=80.8 pTM=0.488 ipTM=0.2 tol=1.01
2024-12-08 12:35:17,824 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=80.9 pTM=0.483 ipTM=0.17 tol=1.75
2024-12-08 12:35:38,892 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=80.9 pTM=0.489 ipTM=0.173 tol=3.05
2024-12-08 12:35:59,958 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=81 pTM=0.485 ipTM=0.191 tol=3.23
2024-12-08 12:36:21,004 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=80.8 pTM=0.483 ipTM=0.169 tol=2.03
2024-12-08 12:36:42,078 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=81 pTM=0.484 ipTM=0.165 tol=2.12
2024-12-08 12:37:03,120 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=80.9 pTM=0.489 ipTM=0.204 tol=2.39
2024-12-08 12:37:24,175 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=80.9 pTM=0.484 ipTM=0.193 tol=3.16
2024-12-08 12:37:45,218 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=80.8 pTM=0.484 ipTM=0.165 tol=3.19
2024-12-08 12:38:06,280 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=80.8 pTM=0.482 ipTM=0.166 tol=2.92
2024-12-08 12:38:27,328 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=80.9 pTM=0.486 ipTM=0.174 tol=3.4
2024-12-08 12:38:48,397 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=80.9 pTM=0.482 ipTM=0.166 tol=3.31
2024-12-08 12:39:09,450 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=80.9 pTM=0.488 ipTM=0.19 tol=3.05
2024-12-08 12:39:30,523 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=80.9 pTM=0.484 ipTM=0.2 tol=2.11
2024-12-08 12:39:51,591 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=80.9 pTM=0.486 ipTM=0.165 tol=2.7
2024-12-08 12:40:12,671 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=80.9 pTM=0.484 ipTM=0.165 tol=2.51
2024-12-08 12:40:33,712 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=81 pTM=0.492 ipTM=0.193 tol=3.05
2024-12-08 12:40:54,789 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=81 pTM=0.488 ipTM=0.191 tol=1.4
2024-12-08 12:41:15,861 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=80.8 pTM=0.485 ipTM=0.171 tol=2.54
2024-12-08 12:41:15,862 alphafold2_multimer_v3_model_2_seed_000 took 653.2s (30 recycles)
2024-12-08 12:41:37,452 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=78.5 pTM=0.542 ipTM=0.306
2024-12-08 12:41:58,461 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=78.8 pTM=0.492 ipTM=0.209 tol=11.5
2024-12-08 12:42:19,474 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=79.5 pTM=0.495 ipTM=0.202 tol=10.2
2024-12-08 12:42:40,497 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=79.1 pTM=0.495 ipTM=0.193 tol=7.43
2024-12-08 12:43:01,546 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=79.6 pTM=0.493 ipTM=0.188 tol=7.58
2024-12-08 12:43:22,564 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=79.4 pTM=0.49 ipTM=0.184 tol=3.94
2024-12-08 12:43:43,571 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=79.5 pTM=0.502 ipTM=0.224 tol=6.58
2024-12-08 12:44:04,608 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=79.7 pTM=0.483 ipTM=0.166 tol=4.27
2024-12-08 12:44:25,625 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=79.8 pTM=0.509 ipTM=0.24 tol=5.51
2024-12-08 12:44:46,656 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=79.8 pTM=0.49 ipTM=0.181 tol=3.46
2024-12-08 12:45:07,680 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=79.8 pTM=0.52 ipTM=0.266 tol=3.45
2024-12-08 12:45:28,710 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=79.7 pTM=0.486 ipTM=0.168 tol=6.21
2024-12-08 12:45:49,722 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=79.6 pTM=0.5 ipTM=0.221 tol=4.73
2024-12-08 12:46:10,740 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=79.3 pTM=0.48 ipTM=0.163 tol=4.98
2024-12-08 12:46:31,777 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=79.4 pTM=0.492 ipTM=0.194 tol=5.86
2024-12-08 12:46:52,830 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=79.4 pTM=0.487 ipTM=0.179 tol=4.75
2024-12-08 12:47:13,872 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=79.5 pTM=0.499 ipTM=0.221 tol=5.3
2024-12-08 12:47:34,907 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=79.4 pTM=0.485 ipTM=0.172 tol=4.83
2024-12-08 12:47:55,954 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=79.5 pTM=0.494 ipTM=0.195 tol=4.2
2024-12-08 12:48:16,984 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=79.3 pTM=0.482 ipTM=0.169 tol=3.67
2024-12-08 12:48:38,036 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=79.3 pTM=0.49 ipTM=0.185 tol=3.45
2024-12-08 12:48:59,088 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=79.2 pTM=0.484 ipTM=0.176 tol=5.85
2024-12-08 12:49:20,156 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=79.4 pTM=0.486 ipTM=0.184 tol=6.1
2024-12-08 12:49:41,228 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=79.5 pTM=0.49 ipTM=0.179 tol=5.32
2024-12-08 12:50:02,278 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=79.4 pTM=0.486 ipTM=0.181 tol=5.21
2024-12-08 12:50:23,335 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=79.5 pTM=0.488 ipTM=0.176 tol=2.88
2024-12-08 12:50:44,370 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=79.5 pTM=0.493 ipTM=0.199 tol=3.51
2024-12-08 12:51:05,438 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=79.6 pTM=0.489 ipTM=0.177 tol=6.65
2024-12-08 12:51:26,493 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=79.4 pTM=0.484 ipTM=0.172 tol=5.24
2024-12-08 12:51:47,528 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=79.4 pTM=0.488 ipTM=0.18 tol=1.58
2024-12-08 12:52:08,540 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=79.6 pTM=0.5 ipTM=0.219 tol=2.9
2024-12-08 12:52:08,541 alphafold2_multimer_v3_model_3_seed_000 took 652.1s (30 recycles)
2024-12-08 12:52:30,173 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=78.3 pTM=0.543 ipTM=0.321
2024-12-08 12:52:51,232 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=79.3 pTM=0.492 ipTM=0.181 tol=14.4
2024-12-08 12:53:12,288 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=79.7 pTM=0.491 ipTM=0.173 tol=3.28
2024-12-08 12:53:33,355 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=79.6 pTM=0.486 ipTM=0.167 tol=2.66
2024-12-08 12:53:54,391 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=79.9 pTM=0.494 ipTM=0.341 tol=5.23
2024-12-08 12:54:15,443 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=79.6 pTM=0.491 ipTM=0.196 tol=4.09
2024-12-08 12:54:36,531 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=79.8 pTM=0.488 ipTM=0.168 tol=5.45
2024-12-08 12:54:57,606 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=79.4 pTM=0.489 ipTM=0.173 tol=5.11
2024-12-08 12:55:18,707 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=80 pTM=0.485 ipTM=0.169 tol=5.67
2024-12-08 12:55:39,804 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=79.6 pTM=0.484 ipTM=0.172 tol=6.03
2024-12-08 12:56:00,877 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=79.9 pTM=0.495 ipTM=0.195 tol=3.97
2024-12-08 12:56:21,996 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=79.8 pTM=0.485 ipTM=0.171 tol=6.21
2024-12-08 12:56:43,102 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=80.1 pTM=0.49 ipTM=0.172 tol=5.41
2024-12-08 12:57:04,206 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=79.5 pTM=0.482 ipTM=0.176 tol=5.63
2024-12-08 12:57:25,268 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=79.8 pTM=0.493 ipTM=0.207 tol=4.4
2024-12-08 12:57:46,360 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=79.4 pTM=0.486 ipTM=0.209 tol=5.89
2024-12-08 12:58:07,466 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=79.8 pTM=0.482 ipTM=0.169 tol=4.28
2024-12-08 12:58:28,568 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=79.8 pTM=0.486 ipTM=0.171 tol=7.36
2024-12-08 12:58:49,662 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=79.9 pTM=0.488 ipTM=0.181 tol=4.54
2024-12-08 12:59:10,761 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=79.9 pTM=0.486 ipTM=0.179 tol=4.82
2024-12-08 12:59:31,841 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=80.1 pTM=0.499 ipTM=0.353 tol=7.2
2024-12-08 12:59:52,892 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=79.5 pTM=0.496 ipTM=0.206 tol=5.99
2024-12-08 13:00:13,979 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=79.9 pTM=0.486 ipTM=0.179 tol=7.36
2024-12-08 13:00:35,100 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=79.8 pTM=0.484 ipTM=0.177 tol=7.79
2024-12-08 13:00:56,178 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=79.8 pTM=0.492 ipTM=0.243 tol=7.75
2024-12-08 13:01:17,270 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=79.7 pTM=0.489 ipTM=0.21 tol=5.14
2024-12-08 13:01:38,378 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=80 pTM=0.488 ipTM=0.181 tol=4.79
2024-12-08 13:01:59,496 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=79.6 pTM=0.487 ipTM=0.176 tol=7.9
2024-12-08 13:02:20,577 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=80 pTM=0.491 ipTM=0.306 tol=7.56
2024-12-08 13:02:41,652 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=79.4 pTM=0.49 ipTM=0.189 tol=4.39
2024-12-08 13:03:02,764 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=80 pTM=0.484 ipTM=0.176 tol=5.7
2024-12-08 13:03:02,765 alphafold2_multimer_v3_model_4_seed_000 took 653.6s (30 recycles)
2024-12-08 13:03:24,440 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=77.4 pTM=0.534 ipTM=0.307
2024-12-08 13:03:45,616 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=78.4 pTM=0.487 ipTM=0.209 tol=8.55
2024-12-08 13:04:06,734 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=79.1 pTM=0.494 ipTM=0.244 tol=9.66
2024-12-08 13:04:27,845 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=79.2 pTM=0.498 ipTM=0.225 tol=6.65
2024-12-08 13:04:48,974 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=79.2 pTM=0.485 ipTM=0.185 tol=3.38
2024-12-08 13:05:10,100 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=79.2 pTM=0.497 ipTM=0.225 tol=3.12
2024-12-08 13:05:31,216 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=79.5 pTM=0.488 ipTM=0.201 tol=3
2024-12-08 13:05:52,342 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=79.6 pTM=0.494 ipTM=0.216 tol=4.45
2024-12-08 13:06:13,509 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=79.4 pTM=0.473 ipTM=0.17 tol=2.37
2024-12-08 13:06:34,673 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=79.4 pTM=0.489 ipTM=0.203 tol=2.44
2024-12-08 13:06:55,824 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=79.4 pTM=0.472 ipTM=0.17 tol=3.16
2024-12-08 13:07:16,983 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=79.4 pTM=0.487 ipTM=0.199 tol=2.2
2024-12-08 13:07:38,129 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=79.4 pTM=0.481 ipTM=0.186 tol=1.8
2024-12-08 13:07:59,255 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=79.2 pTM=0.49 ipTM=0.21 tol=1.65
2024-12-08 13:08:20,429 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=79.2 pTM=0.473 ipTM=0.175 tol=2.66
2024-12-08 13:08:41,589 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=79.2 pTM=0.485 ipTM=0.205 tol=2.47
2024-12-08 13:09:02,732 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=79.4 pTM=0.474 ipTM=0.182 tol=1.99
2024-12-08 13:09:23,885 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=79.2 pTM=0.484 ipTM=0.198 tol=1.7
2024-12-08 13:09:45,024 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=79.2 pTM=0.472 ipTM=0.179 tol=1.46
2024-12-08 13:10:06,176 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=79.3 pTM=0.485 ipTM=0.208 tol=1.98
2024-12-08 13:10:27,339 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=79.2 pTM=0.469 ipTM=0.174 tol=2.78
2024-12-08 13:10:48,486 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=79.1 pTM=0.476 ipTM=0.189 tol=1.93
2024-12-08 13:11:09,625 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=79.3 pTM=0.471 ipTM=0.179 tol=2.17
2024-12-08 13:11:30,777 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=79.5 pTM=0.488 ipTM=0.2 tol=2.63
2024-12-08 13:11:51,920 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=79.2 pTM=0.47 ipTM=0.172 tol=3.19
2024-12-08 13:12:13,081 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=79.2 pTM=0.476 ipTM=0.176 tol=3.08
2024-12-08 13:12:34,228 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=79.2 pTM=0.474 ipTM=0.185 tol=2.83
2024-12-08 13:12:55,399 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=79.3 pTM=0.478 ipTM=0.187 tol=2.14
2024-12-08 13:13:16,557 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=79.3 pTM=0.476 ipTM=0.186 tol=1.99
2024-12-08 13:13:37,731 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=79.2 pTM=0.479 ipTM=0.19 tol=2.08
2024-12-08 13:13:58,899 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=79.3 pTM=0.475 ipTM=0.185 tol=1.41
2024-12-08 13:13:58,900 alphafold2_multimer_v3_model_5_seed_000 took 655.5s (30 recycles)
2024-12-08 13:13:59,495 reranking models by 'multimer' metric
2024-12-08 13:14:02,891 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 13:15:14,590 Relaxation took 75.1s
2024-12-08 13:15:14,590 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=79.6 pTM=0.5 ipTM=0.219
2024-12-08 13:16:17,515 Relaxation took 62.9s
2024-12-08 13:16:17,515 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=80.4 pTM=0.484 ipTM=0.206
2024-12-08 13:17:17,002 Relaxation took 59.5s
2024-12-08 13:17:17,002 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=79.3 pTM=0.475 ipTM=0.185
2024-12-08 13:18:47,621 Relaxation took 90.6s
2024-12-08 13:18:47,621 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=80 pTM=0.484 ipTM=0.176
2024-12-08 13:19:33,027 Relaxation took 45.4s
2024-12-08 13:19:33,027 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=80.8 pTM=0.485 ipTM=0.171
2024-12-08 13:19:35,055 Done