2024-12-08 12:46:26,034 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 12:46:26,325 Running on GPU
2024-12-08 12:46:29,872 Found 6 citations for tools or databases
2024-12-08 12:46:29,872 Query 1/1: SKP2_PLEKHG2 (length 1810)
2024-12-08 12:46:30,167 Sleeping for 7s. Reason: PENDING
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2024-12-08 12:47:28,224 Sleeping for 10s. Reason: RUNNING
2024-12-08 12:47:38,484 Sleeping for 5s. Reason: RUNNING
2024-12-08 12:47:43,734 Sleeping for 7s. Reason: RUNNING
2024-12-08 12:47:50,988 Sleeping for 10s. Reason: RUNNING
2024-12-08 12:48:01,248 Sleeping for 9s. Reason: RUNNING
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2024-12-08 12:48:15,755 Sleeping for 8s. Reason: RUNNING
2024-12-08 12:48:24,017 Sleeping for 7s. Reason: RUNNING
2024-12-08 12:48:31,273 Sleeping for 8s. Reason: RUNNING
2024-12-08 12:48:39,533 Sleeping for 9s. Reason: RUNNING
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2024-12-08 12:48:55,055 Sleeping for 5s. Reason: RUNNING
2024-12-08 12:49:01,824 Sleeping for 8s. Reason: PENDING
2024-12-08 12:49:10,090 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:49:16,348 Sleeping for 8s. Reason: RUNNING
2024-12-08 12:49:24,608 Sleeping for 7s. Reason: RUNNING
2024-12-08 12:49:31,862 Sleeping for 9s. Reason: RUNNING
2024-12-08 12:49:41,122 Sleeping for 8s. Reason: RUNNING
2024-12-08 12:49:49,385 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:49:55,641 Sleeping for 10s. Reason: RUNNING
2024-12-08 12:50:05,897 Sleeping for 5s. Reason: RUNNING
2024-12-08 12:50:11,158 Sleeping for 7s. Reason: RUNNING
2024-12-08 12:50:18,419 Sleeping for 5s. Reason: RUNNING
2024-12-08 12:50:23,674 Sleeping for 10s. Reason: RUNNING
2024-12-08 12:50:33,935 Sleeping for 5s. Reason: RUNNING
2024-12-08 12:50:39,186 Sleeping for 8s. Reason: RUNNING
2024-12-08 12:50:47,442 Sleeping for 5s. Reason: RUNNING
2024-12-08 12:50:52,699 Sleeping for 5s. Reason: RUNNING
2024-12-08 12:50:57,952 Sleeping for 5s. Reason: RUNNING
2024-12-08 12:51:03,207 Sleeping for 8s. Reason: RUNNING
2024-12-08 12:51:11,471 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:51:17,726 Sleeping for 9s. Reason: RUNNING
2024-12-08 12:51:30,854 Setting max_seq=508, max_extra_seq=2048
2024-12-08 12:56:03,835 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=40.6 pTM=0.317 ipTM=0.254
2024-12-08 12:58:00,903 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=40.4 pTM=0.313 ipTM=0.218 tol=19.6
2024-12-08 12:59:58,008 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=39.8 pTM=0.315 ipTM=0.239 tol=16.5
2024-12-08 13:01:55,204 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=40 pTM=0.314 ipTM=0.233 tol=14.9
2024-12-08 13:03:52,495 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=40.2 pTM=0.314 ipTM=0.233 tol=13.7
2024-12-08 13:05:49,780 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=40 pTM=0.317 ipTM=0.295 tol=9.16
2024-12-08 13:07:47,062 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=40 pTM=0.317 ipTM=0.341 tol=9.66
2024-12-08 13:09:44,313 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=40.3 pTM=0.317 ipTM=0.386 tol=9.64
2024-12-08 13:11:41,588 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=40.3 pTM=0.316 ipTM=0.343 tol=12.7
2024-12-08 13:13:38,837 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=40.5 pTM=0.315 ipTM=0.316 tol=9.2
2024-12-08 13:15:36,068 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=40.5 pTM=0.316 ipTM=0.355 tol=7.58
2024-12-08 13:17:33,233 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=40.6 pTM=0.317 ipTM=0.393 tol=11.2
2024-12-08 13:19:30,448 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=40.5 pTM=0.319 ipTM=0.371 tol=8.3
2024-12-08 13:21:27,659 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=40.4 pTM=0.319 ipTM=0.411 tol=16.4
2024-12-08 13:23:24,841 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=40.4 pTM=0.32 ipTM=0.372 tol=12.6
2024-12-08 13:25:21,960 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=40.5 pTM=0.319 ipTM=0.378 tol=10.6
2024-12-08 13:27:19,074 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=40.5 pTM=0.319 ipTM=0.395 tol=7.57
2024-12-08 13:29:16,209 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=40.5 pTM=0.319 ipTM=0.431 tol=10.4
2024-12-08 13:31:13,441 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=40.7 pTM=0.32 ipTM=0.444 tol=10.1
2024-12-08 13:33:10,750 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=40.5 pTM=0.321 ipTM=0.481 tol=10.6
2024-12-08 13:35:08,054 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=40.5 pTM=0.321 ipTM=0.471 tol=5.89
2024-12-08 13:37:05,320 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=40.5 pTM=0.321 ipTM=0.49 tol=11.6
2024-12-08 13:39:02,561 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=40.8 pTM=0.321 ipTM=0.479 tol=11.1
2024-12-08 13:40:59,755 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=40.8 pTM=0.324 ipTM=0.505 tol=5.83
2024-12-08 13:42:57,001 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=40.8 pTM=0.323 ipTM=0.495 tol=5.51
2024-12-08 13:44:54,248 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=40.6 pTM=0.324 ipTM=0.503 tol=5.95
2024-12-08 13:46:51,484 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=40.8 pTM=0.325 ipTM=0.519 tol=5.89
2024-12-08 13:48:48,710 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=40.7 pTM=0.324 ipTM=0.513 tol=15.1
2024-12-08 13:50:45,939 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=40.7 pTM=0.325 ipTM=0.525 tol=13.7
2024-12-08 13:52:43,160 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=40.5 pTM=0.325 ipTM=0.528 tol=5.5
2024-12-08 13:54:40,361 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=40.6 pTM=0.327 ipTM=0.525 tol=4.19
2024-12-08 13:54:40,363 alphafold2_multimer_v3_model_1_seed_000 took 3784.4s (30 recycles)
2024-12-08 13:56:39,246 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=41.1 pTM=0.32 ipTM=0.227
2024-12-08 13:58:36,300 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=41.4 pTM=0.318 ipTM=0.299 tol=23.5
2024-12-08 14:00:33,430 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=41.6 pTM=0.322 ipTM=0.309 tol=10.9
2024-12-08 14:02:30,549 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=41.8 pTM=0.321 ipTM=0.307 tol=9.52
2024-12-08 14:04:27,581 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=41.8 pTM=0.325 ipTM=0.429 tol=10.2
2024-12-08 14:06:24,654 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=41.8 pTM=0.326 ipTM=0.4 tol=11.8
2024-12-08 14:08:21,704 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=41.9 pTM=0.327 ipTM=0.337 tol=9.2
2024-12-08 14:10:18,844 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=42 pTM=0.328 ipTM=0.441 tol=8.2
2024-12-08 14:12:15,969 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=41.9 pTM=0.328 ipTM=0.4 tol=7.25
2024-12-08 14:14:13,044 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=41.9 pTM=0.326 ipTM=0.38 tol=7.53
2024-12-08 14:16:10,150 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=42 pTM=0.327 ipTM=0.422 tol=6.29
2024-12-08 14:18:07,190 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=41.9 pTM=0.331 ipTM=0.424 tol=7.25
2024-12-08 14:20:04,276 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=41.9 pTM=0.329 ipTM=0.401 tol=5.79
2024-12-08 14:22:01,335 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=41.9 pTM=0.331 ipTM=0.429 tol=4.47
2024-12-08 14:23:58,348 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=41.9 pTM=0.328 ipTM=0.429 tol=4.92
2024-12-08 14:25:55,381 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=41.9 pTM=0.33 ipTM=0.406 tol=5.5
2024-12-08 14:27:52,427 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=41.8 pTM=0.33 ipTM=0.417 tol=4.8
2024-12-08 14:29:49,462 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=41.9 pTM=0.329 ipTM=0.402 tol=4.95
2024-12-08 14:31:46,483 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=41.9 pTM=0.327 ipTM=0.396 tol=5.73
2024-12-08 14:33:43,507 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=41.8 pTM=0.327 ipTM=0.377 tol=6.83
2024-12-08 14:35:40,546 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=41.8 pTM=0.332 ipTM=0.526 tol=8.24
2024-12-08 14:37:37,634 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=41.9 pTM=0.331 ipTM=0.428 tol=8.8
2024-12-08 14:39:34,817 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=41.9 pTM=0.328 ipTM=0.417 tol=8.87
2024-12-08 14:41:31,891 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=42.1 pTM=0.331 ipTM=0.515 tol=6.66
2024-12-08 14:43:28,962 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=42 pTM=0.331 ipTM=0.46 tol=6.37
2024-12-08 14:45:26,067 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=42.1 pTM=0.33 ipTM=0.498 tol=5.19
2024-12-08 14:47:23,166 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=42 pTM=0.33 ipTM=0.478 tol=4.23
2024-12-08 14:49:20,253 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=41.9 pTM=0.328 ipTM=0.509 tol=6.61
2024-12-08 14:51:17,357 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=42 pTM=0.329 ipTM=0.472 tol=5.95
2024-12-08 14:53:14,421 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=42 pTM=0.33 ipTM=0.541 tol=6.32
2024-12-08 14:55:11,573 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=42 pTM=0.331 ipTM=0.471 tol=4.46
2024-12-08 14:55:11,575 alphafold2_multimer_v3_model_2_seed_000 took 3629.2s (30 recycles)
2024-12-08 14:57:10,987 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=41.6 pTM=0.332 ipTM=0.359
2024-12-08 14:59:08,594 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=41.2 pTM=0.313 ipTM=0.201 tol=26
2024-12-08 15:01:06,292 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=41.1 pTM=0.316 ipTM=0.271 tol=17
2024-12-08 15:03:03,950 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=41.2 pTM=0.318 ipTM=0.248 tol=12.5
2024-12-08 15:05:01,581 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=41.5 pTM=0.319 ipTM=0.288 tol=12.2
2024-12-08 15:06:59,251 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=41.3 pTM=0.321 ipTM=0.322 tol=11.3
2024-12-08 15:08:56,937 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=41.5 pTM=0.32 ipTM=0.323 tol=8.35
2024-12-08 15:10:54,603 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=41.5 pTM=0.321 ipTM=0.303 tol=8.51
2024-12-08 15:12:52,274 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=41.5 pTM=0.321 ipTM=0.388 tol=7.86
2024-12-08 15:14:49,947 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=41.5 pTM=0.322 ipTM=0.409 tol=7.59
2024-12-08 15:16:47,582 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=41.6 pTM=0.323 ipTM=0.407 tol=6.61
2024-12-08 15:18:45,253 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=41.6 pTM=0.322 ipTM=0.388 tol=6.46
2024-12-08 15:20:42,938 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=41.7 pTM=0.323 ipTM=0.421 tol=5.49
2024-12-08 15:22:40,583 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=41.6 pTM=0.324 ipTM=0.469 tol=6.18
2024-12-08 15:24:38,287 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=41.7 pTM=0.323 ipTM=0.436 tol=6.86
2024-12-08 15:26:35,960 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=41.6 pTM=0.325 ipTM=0.452 tol=6.36
2024-12-08 15:28:33,688 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=41.5 pTM=0.323 ipTM=0.435 tol=6.69
2024-12-08 15:30:31,402 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=41.6 pTM=0.322 ipTM=0.456 tol=4.75
2024-12-08 15:32:29,061 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=41.7 pTM=0.322 ipTM=0.453 tol=5.71
2024-12-08 15:34:26,800 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=41.7 pTM=0.323 ipTM=0.465 tol=5.61
2024-12-08 15:36:24,491 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=41.6 pTM=0.322 ipTM=0.462 tol=3.85
2024-12-08 15:38:22,202 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=41.7 pTM=0.321 ipTM=0.462 tol=4.37
2024-12-08 15:40:19,817 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=41.6 pTM=0.322 ipTM=0.444 tol=8.2
2024-12-08 15:42:17,501 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=41.4 pTM=0.325 ipTM=0.454 tol=6.18
2024-12-08 15:44:15,103 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=41.7 pTM=0.324 ipTM=0.448 tol=7.07
2024-12-08 15:46:12,693 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=41.7 pTM=0.325 ipTM=0.458 tol=6.23
2024-12-08 15:48:10,300 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=41.6 pTM=0.324 ipTM=0.448 tol=6.51
2024-12-08 15:50:07,903 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=41.8 pTM=0.322 ipTM=0.472 tol=7.73
2024-12-08 15:52:05,574 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=41.6 pTM=0.322 ipTM=0.446 tol=8
2024-12-08 15:54:03,209 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=41.7 pTM=0.323 ipTM=0.475 tol=8.01
2024-12-08 15:56:00,869 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=41.6 pTM=0.321 ipTM=0.43 tol=8.09
2024-12-08 15:56:00,871 alphafold2_multimer_v3_model_3_seed_000 took 3647.4s (30 recycles)
2024-12-08 15:58:00,134 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=39.1 pTM=0.33 ipTM=0.261
2024-12-08 15:59:57,766 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=39.6 pTM=0.322 ipTM=0.357 tol=21.1
2024-12-08 16:01:55,358 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=39.6 pTM=0.323 ipTM=0.353 tol=16.7
2024-12-08 16:03:53,107 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=39.4 pTM=0.326 ipTM=0.312 tol=15.4
2024-12-08 16:05:50,803 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=39.6 pTM=0.322 ipTM=0.283 tol=13.6
2024-12-08 16:07:48,600 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=39.3 pTM=0.323 ipTM=0.288 tol=12.5
2024-12-08 16:09:46,295 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=39.6 pTM=0.321 ipTM=0.314 tol=9.39
2024-12-08 16:11:44,033 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=39.6 pTM=0.32 ipTM=0.333 tol=10.4
2024-12-08 16:13:41,782 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=39.6 pTM=0.321 ipTM=0.317 tol=7.22
2024-12-08 16:15:39,506 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=39.8 pTM=0.322 ipTM=0.347 tol=9.12
2024-12-08 16:17:37,318 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=39.4 pTM=0.321 ipTM=0.343 tol=15.5
2024-12-08 16:19:35,119 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=39.6 pTM=0.321 ipTM=0.312 tol=15.5
2024-12-08 16:21:32,868 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=39.8 pTM=0.323 ipTM=0.341 tol=15.1
2024-12-08 16:23:30,598 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=39.6 pTM=0.324 ipTM=0.316 tol=12.6
2024-12-08 16:25:28,429 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=39.5 pTM=0.323 ipTM=0.286 tol=13.6
2024-12-08 16:27:26,187 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=39.7 pTM=0.325 ipTM=0.361 tol=11.5
2024-12-08 16:29:23,906 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=39.6 pTM=0.325 ipTM=0.368 tol=10.2
2024-12-08 16:31:21,701 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=39.8 pTM=0.323 ipTM=0.292 tol=9.34
2024-12-08 16:33:19,467 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=39.7 pTM=0.322 ipTM=0.275 tol=9.05
2024-12-08 16:35:17,205 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=39.7 pTM=0.326 ipTM=0.415 tol=10.8
2024-12-08 16:37:14,981 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=39.6 pTM=0.326 ipTM=0.373 tol=8.83
2024-12-08 16:39:12,720 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=39.6 pTM=0.324 ipTM=0.293 tol=10
2024-12-08 16:41:10,340 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=39.7 pTM=0.328 ipTM=0.521 tol=12.2
2024-12-08 16:43:07,989 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=39.7 pTM=0.329 ipTM=0.455 tol=9.98
2024-12-08 16:45:05,663 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=39.8 pTM=0.331 ipTM=0.53 tol=10.5
2024-12-08 16:47:03,358 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=39.8 pTM=0.329 ipTM=0.494 tol=10.2
2024-12-08 16:49:01,053 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=39.6 pTM=0.33 ipTM=0.519 tol=9.44
2024-12-08 16:50:58,700 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=39.8 pTM=0.327 ipTM=0.497 tol=8.48
2024-12-08 16:52:56,441 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=39.8 pTM=0.329 ipTM=0.512 tol=8.1
2024-12-08 16:54:54,178 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=39.7 pTM=0.331 ipTM=0.521 tol=7.42
2024-12-08 16:56:51,929 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=39.6 pTM=0.331 ipTM=0.512 tol=7.1
2024-12-08 16:56:51,931 alphafold2_multimer_v3_model_4_seed_000 took 3649.1s (30 recycles)
2024-12-08 16:58:51,451 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=40.8 pTM=0.308 ipTM=0.197
2024-12-08 17:00:49,055 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=41 pTM=0.312 ipTM=0.206 tol=21.1
2024-12-08 17:02:46,790 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=40.9 pTM=0.311 ipTM=0.214 tol=17.8
2024-12-08 17:04:44,423 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=41 pTM=0.316 ipTM=0.196 tol=20.2
2024-12-08 17:06:42,123 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=41.4 pTM=0.318 ipTM=0.205 tol=14
2024-12-08 17:08:39,804 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=41.3 pTM=0.318 ipTM=0.203 tol=12.9
2024-12-08 17:10:37,455 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=41.5 pTM=0.318 ipTM=0.201 tol=13
2024-12-08 17:12:35,104 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=41.6 pTM=0.317 ipTM=0.196 tol=9.16
2024-12-08 17:14:32,794 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=41.6 pTM=0.319 ipTM=0.2 tol=9.45
2024-12-08 17:16:30,446 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=41.6 pTM=0.319 ipTM=0.199 tol=13.9
2024-12-08 17:18:28,118 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=41.7 pTM=0.321 ipTM=0.203 tol=14.3
2024-12-08 17:20:25,787 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=41.8 pTM=0.322 ipTM=0.197 tol=15.5
2024-12-08 17:22:23,490 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=42 pTM=0.323 ipTM=0.198 tol=11.7
2024-12-08 17:24:21,132 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=41.9 pTM=0.323 ipTM=0.198 tol=12.3
2024-12-08 17:26:18,845 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=41.9 pTM=0.322 ipTM=0.198 tol=15.8
2024-12-08 17:28:16,573 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=41.9 pTM=0.323 ipTM=0.198 tol=9.59
2024-12-08 17:30:14,248 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=42 pTM=0.323 ipTM=0.201 tol=13.6
2024-12-08 17:32:11,967 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=42.1 pTM=0.323 ipTM=0.199 tol=15.4
2024-12-08 17:34:09,645 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=42.2 pTM=0.322 ipTM=0.199 tol=9.78
2024-12-08 17:36:07,339 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=42.1 pTM=0.323 ipTM=0.203 tol=10.1
2024-12-08 17:38:05,038 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=42 pTM=0.322 ipTM=0.201 tol=9.69
2024-12-08 17:40:02,708 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=42.2 pTM=0.321 ipTM=0.196 tol=8.61
2024-12-08 17:42:00,387 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=42.1 pTM=0.322 ipTM=0.197 tol=6.91
2024-12-08 17:43:58,106 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=42.2 pTM=0.321 ipTM=0.198 tol=7.54
2024-12-08 17:45:55,825 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=42.2 pTM=0.321 ipTM=0.198 tol=7.69
2024-12-08 17:47:53,519 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=42.2 pTM=0.321 ipTM=0.2 tol=6.75
2024-12-08 17:49:51,212 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=42 pTM=0.322 ipTM=0.204 tol=7.64
2024-12-08 17:51:48,952 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=42.2 pTM=0.321 ipTM=0.202 tol=16.2
2024-12-08 17:53:46,679 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=42.2 pTM=0.32 ipTM=0.197 tol=12.3
2024-12-08 17:55:44,384 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=42.2 pTM=0.322 ipTM=0.196 tol=14.6
2024-12-08 17:57:42,041 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=42.2 pTM=0.321 ipTM=0.2 tol=9.63
2024-12-08 17:57:42,043 alphafold2_multimer_v3_model_5_seed_000 took 3648.2s (30 recycles)
2024-12-08 17:57:43,954 reranking models by 'multimer' metric
2024-12-08 17:57:48,064 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 18:02:07,360 Relaxation took 263.4s
2024-12-08 18:02:07,360 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=40.6 pTM=0.327 ipTM=0.525
2024-12-08 18:08:03,958 Relaxation took 356.6s
2024-12-08 18:08:03,958 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=39.6 pTM=0.331 ipTM=0.512
2024-12-08 18:12:43,759 Relaxation took 279.8s
2024-12-08 18:12:43,760 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=42 pTM=0.331 ipTM=0.471
2024-12-08 18:17:34,429 Relaxation took 290.7s
2024-12-08 18:17:34,429 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=41.6 pTM=0.321 ipTM=0.43
2024-12-08 18:26:23,113 Relaxation took 528.7s
2024-12-08 18:26:23,113 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=42.2 pTM=0.321 ipTM=0.2
2024-12-08 18:26:27,453 Done