2024-12-08 12:52:15,962 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 12:52:16,305 Running on GPU
2024-12-08 12:52:19,141 Found 6 citations for tools or databases
2024-12-08 12:52:19,141 Query 1/1: SKP2_SENP1 (length 1068)
2024-12-08 12:52:19,465 Sleeping for 6s. Reason: PENDING
2024-12-08 12:52:25,733 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:52:31,995 Sleeping for 7s. Reason: RUNNING
2024-12-08 12:52:39,249 Sleeping for 5s. Reason: RUNNING
2024-12-08 12:52:44,505 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:52:50,761 Sleeping for 9s. Reason: RUNNING
2024-12-08 12:53:00,021 Sleeping for 8s. Reason: RUNNING
2024-12-08 12:53:08,283 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:53:14,538 Sleeping for 5s. Reason: RUNNING
2024-12-08 12:53:19,791 Sleeping for 9s. Reason: RUNNING
2024-12-08 12:53:29,056 Sleeping for 7s. Reason: RUNNING
2024-12-08 12:53:36,320 Sleeping for 5s. Reason: RUNNING
2024-12-08 12:53:41,572 Sleeping for 9s. Reason: RUNNING
2024-12-08 12:53:50,833 Sleeping for 7s. Reason: RUNNING
2024-12-08 12:53:59,738 Sleeping for 10s. Reason: PENDING
2024-12-08 12:54:10,001 Sleeping for 9s. Reason: RUNNING
2024-12-08 12:54:19,264 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:54:25,536 Sleeping for 10s. Reason: RUNNING
2024-12-08 12:54:35,795 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:54:42,051 Sleeping for 9s. Reason: RUNNING
2024-12-08 12:54:51,306 Sleeping for 9s. Reason: RUNNING
2024-12-08 12:55:00,567 Sleeping for 6s. Reason: RUNNING
2024-12-08 12:55:06,824 Sleeping for 10s. Reason: RUNNING
2024-12-08 12:55:21,099 Setting max_seq=508, max_extra_seq=2048
2024-12-08 12:58:35,211 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=55.5 pTM=0.409 ipTM=0.197
2024-12-08 12:59:05,085 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=56.1 pTM=0.42 ipTM=0.216 tol=15.6
2024-12-08 12:59:35,129 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=56.5 pTM=0.419 ipTM=0.196 tol=12.2
2024-12-08 13:00:05,222 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=56.3 pTM=0.426 ipTM=0.23 tol=8.49
2024-12-08 13:00:35,418 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=56.4 pTM=0.429 ipTM=0.239 tol=7.29
2024-12-08 13:01:05,558 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=56.2 pTM=0.435 ipTM=0.257 tol=5.13
2024-12-08 13:01:35,757 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=56.4 pTM=0.439 ipTM=0.275 tol=4.98
2024-12-08 13:02:06,003 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=56.3 pTM=0.438 ipTM=0.264 tol=4.85
2024-12-08 13:02:36,241 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=56.3 pTM=0.434 ipTM=0.249 tol=4.39
2024-12-08 13:03:06,496 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=56.3 pTM=0.444 ipTM=0.287 tol=4.95
2024-12-08 13:03:36,768 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=57.5 pTM=0.503 ipTM=0.517 tol=5.77
2024-12-08 13:04:07,057 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=57.4 pTM=0.499 ipTM=0.508 tol=6.34
2024-12-08 13:04:37,352 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=57.1 pTM=0.488 ipTM=0.471 tol=4.17
2024-12-08 13:05:07,666 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=56.6 pTM=0.449 ipTM=0.308 tol=5.55
2024-12-08 13:05:37,939 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=56.8 pTM=0.459 ipTM=0.34 tol=5.11
2024-12-08 13:06:08,286 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=58.1 pTM=0.523 ipTM=0.604 tol=4.64
2024-12-08 13:06:38,569 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=57.8 pTM=0.507 ipTM=0.551 tol=3.39
2024-12-08 13:07:08,871 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=57.8 pTM=0.507 ipTM=0.544 tol=3.15
2024-12-08 13:07:39,142 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=57.9 pTM=0.508 ipTM=0.547 tol=4.77
2024-12-08 13:08:09,421 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=57.8 pTM=0.509 ipTM=0.553 tol=3.41
2024-12-08 13:08:39,735 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=57.6 pTM=0.499 ipTM=0.521 tol=4.17
2024-12-08 13:09:10,021 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=57.8 pTM=0.5 ipTM=0.521 tol=3.39
2024-12-08 13:09:40,261 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=57.8 pTM=0.505 ipTM=0.542 tol=3.08
2024-12-08 13:10:10,505 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=58 pTM=0.512 ipTM=0.565 tol=3.82
2024-12-08 13:10:40,736 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=57.8 pTM=0.502 ipTM=0.532 tol=2.89
2024-12-08 13:11:10,937 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=58.3 pTM=0.521 ipTM=0.6 tol=3.33
2024-12-08 13:11:41,160 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=58.1 pTM=0.508 ipTM=0.561 tol=3.03
2024-12-08 13:12:11,381 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=57.8 pTM=0.503 ipTM=0.543 tol=4.1
2024-12-08 13:12:41,651 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=58.1 pTM=0.513 ipTM=0.583 tol=4.39
2024-12-08 13:13:11,887 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=58 pTM=0.525 ipTM=0.583 tol=8.06
2024-12-08 13:13:42,142 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=58.4 pTM=0.526 ipTM=0.59 tol=5.84
2024-12-08 13:13:42,142 alphafold2_multimer_v3_model_1_seed_000 took 1094.0s (30 recycles)
2024-12-08 13:14:13,350 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=54.8 pTM=0.427 ipTM=0.216
2024-12-08 13:14:43,719 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=56.2 pTM=0.437 ipTM=0.231 tol=11.7
2024-12-08 13:15:14,083 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=58.2 pTM=0.535 ipTM=0.641 tol=9.3
2024-12-08 13:15:44,443 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=58.1 pTM=0.529 ipTM=0.628 tol=5.49
2024-12-08 13:16:14,802 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=58.1 pTM=0.523 ipTM=0.597 tol=5.31
2024-12-08 13:16:45,118 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=58.4 pTM=0.531 ipTM=0.56 tol=11.7
2024-12-08 13:17:15,435 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=58.5 pTM=0.533 ipTM=0.561 tol=7.07
2024-12-08 13:17:45,724 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=58.3 pTM=0.518 ipTM=0.503 tol=5
2024-12-08 13:18:15,973 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=58.2 pTM=0.508 ipTM=0.493 tol=4.75
2024-12-08 13:18:46,292 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=58.2 pTM=0.511 ipTM=0.491 tol=2.18
2024-12-08 13:19:16,538 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=58.5 pTM=0.532 ipTM=0.564 tol=2.02
2024-12-08 13:19:46,849 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=58.6 pTM=0.537 ipTM=0.583 tol=1.46
2024-12-08 13:20:17,096 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=58.9 pTM=0.552 ipTM=0.644 tol=2.84
2024-12-08 13:20:47,336 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=59.1 pTM=0.55 ipTM=0.631 tol=5.19
2024-12-08 13:21:17,574 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=59.2 pTM=0.554 ipTM=0.646 tol=5.37
2024-12-08 13:21:47,777 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=59.1 pTM=0.552 ipTM=0.637 tol=2.56
2024-12-08 13:22:17,985 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=59.2 pTM=0.553 ipTM=0.648 tol=1.94
2024-12-08 13:22:48,190 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=59.2 pTM=0.554 ipTM=0.647 tol=1.73
2024-12-08 13:23:18,408 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=59.3 pTM=0.561 ipTM=0.671 tol=1.53
2024-12-08 13:23:48,614 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=59.3 pTM=0.559 ipTM=0.663 tol=1.5
2024-12-08 13:24:18,819 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=59.2 pTM=0.558 ipTM=0.66 tol=1.35
2024-12-08 13:24:49,027 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=59.3 pTM=0.56 ipTM=0.666 tol=1.11
2024-12-08 13:25:19,230 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=59.5 pTM=0.564 ipTM=0.687 tol=1.35
2024-12-08 13:25:49,445 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=59.3 pTM=0.558 ipTM=0.658 tol=1.35
2024-12-08 13:26:19,669 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=59.4 pTM=0.561 ipTM=0.668 tol=1.12
2024-12-08 13:26:49,895 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=59.3 pTM=0.561 ipTM=0.669 tol=1.61
2024-12-08 13:27:20,181 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=59.4 pTM=0.561 ipTM=0.669 tol=1.64
2024-12-08 13:27:50,408 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=59.2 pTM=0.556 ipTM=0.658 tol=1.22
2024-12-08 13:28:20,630 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=59.2 pTM=0.56 ipTM=0.673 tol=1.21
2024-12-08 13:28:50,858 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=59.2 pTM=0.56 ipTM=0.674 tol=1.45
2024-12-08 13:29:21,085 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=59.1 pTM=0.559 ipTM=0.666 tol=1.35
2024-12-08 13:29:21,086 alphafold2_multimer_v3_model_2_seed_000 took 938.1s (30 recycles)
2024-12-08 13:29:52,271 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=54.7 pTM=0.459 ipTM=0.363
2024-12-08 13:30:22,614 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=54.7 pTM=0.451 ipTM=0.349 tol=14.3
2024-12-08 13:30:53,009 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=55.2 pTM=0.411 ipTM=0.194 tol=17.7
2024-12-08 13:31:23,396 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=55 pTM=0.418 ipTM=0.219 tol=12.2
2024-12-08 13:31:53,757 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=55.4 pTM=0.422 ipTM=0.247 tol=11.2
2024-12-08 13:32:24,125 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=55.4 pTM=0.429 ipTM=0.25 tol=12.4
2024-12-08 13:32:54,464 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=56.6 pTM=0.505 ipTM=0.523 tol=8.11
2024-12-08 13:33:24,817 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=56.8 pTM=0.491 ipTM=0.485 tol=4.83
2024-12-08 13:33:55,115 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=55.9 pTM=0.45 ipTM=0.315 tol=8.63
2024-12-08 13:34:25,420 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=56.3 pTM=0.483 ipTM=0.43 tol=5.68
2024-12-08 13:34:55,767 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=57.9 pTM=0.545 ipTM=0.663 tol=4.8
2024-12-08 13:35:26,053 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=58 pTM=0.546 ipTM=0.673 tol=3.78
2024-12-08 13:35:56,358 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=57.9 pTM=0.545 ipTM=0.662 tol=2.61
2024-12-08 13:36:26,686 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=57.8 pTM=0.54 ipTM=0.651 tol=2.43
2024-12-08 13:36:56,998 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=57.8 pTM=0.542 ipTM=0.643 tol=3.75
2024-12-08 13:37:27,329 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=57.8 pTM=0.541 ipTM=0.64 tol=3.82
2024-12-08 13:37:57,639 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=57.5 pTM=0.527 ipTM=0.6 tol=7.19
2024-12-08 13:38:27,942 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=57.6 pTM=0.532 ipTM=0.614 tol=3.34
2024-12-08 13:38:58,235 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=57.7 pTM=0.532 ipTM=0.618 tol=5.82
2024-12-08 13:39:28,548 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=57.9 pTM=0.539 ipTM=0.646 tol=3.43
2024-12-08 13:39:58,908 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=57.8 pTM=0.536 ipTM=0.638 tol=3.17
2024-12-08 13:40:29,231 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=57.5 pTM=0.526 ipTM=0.594 tol=2.85
2024-12-08 13:40:59,545 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=56.8 pTM=0.5 ipTM=0.498 tol=4.98
2024-12-08 13:41:29,894 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=56.9 pTM=0.5 ipTM=0.49 tol=5.01
2024-12-08 13:42:00,207 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=57.3 pTM=0.519 ipTM=0.57 tol=4.06
2024-12-08 13:42:30,523 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=57.9 pTM=0.543 ipTM=0.638 tol=3.8
2024-12-08 13:43:00,838 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=57.7 pTM=0.525 ipTM=0.591 tol=3.76
2024-12-08 13:43:31,147 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=57.3 pTM=0.51 ipTM=0.536 tol=4.23
2024-12-08 13:44:01,464 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=56.7 pTM=0.485 ipTM=0.441 tol=6.69
2024-12-08 13:44:31,793 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=56.9 pTM=0.515 ipTM=0.536 tol=5.08
2024-12-08 13:45:02,129 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=57.4 pTM=0.526 ipTM=0.6 tol=6.97
2024-12-08 13:45:02,130 alphafold2_multimer_v3_model_3_seed_000 took 940.2s (30 recycles)
2024-12-08 13:45:33,370 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=53.7 pTM=0.427 ipTM=0.227
2024-12-08 13:46:03,709 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=55.8 pTM=0.429 ipTM=0.387 tol=17.4
2024-12-08 13:46:34,044 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=55 pTM=0.423 ipTM=0.211 tol=9.45
2024-12-08 13:47:04,368 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=54.9 pTM=0.419 ipTM=0.197 tol=6.43
2024-12-08 13:47:34,682 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=55.4 pTM=0.434 ipTM=0.487 tol=8.56
2024-12-08 13:48:05,014 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=55 pTM=0.433 ipTM=0.328 tol=7.81
2024-12-08 13:48:35,322 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=55.3 pTM=0.433 ipTM=0.418 tol=4.97
2024-12-08 13:49:05,639 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=55.2 pTM=0.431 ipTM=0.336 tol=3.62
2024-12-08 13:49:35,922 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=55.3 pTM=0.431 ipTM=0.377 tol=3.07
2024-12-08 13:50:06,250 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=55.2 pTM=0.431 ipTM=0.302 tol=3.28
2024-12-08 13:50:36,540 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=56.3 pTM=0.484 ipTM=0.43 tol=9.41
2024-12-08 13:51:06,825 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=57.5 pTM=0.523 ipTM=0.566 tol=9.83
2024-12-08 13:51:37,147 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=57.8 pTM=0.54 ipTM=0.638 tol=3.7
2024-12-08 13:52:07,443 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=58.1 pTM=0.542 ipTM=0.643 tol=2.61
2024-12-08 13:52:37,742 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=58.2 pTM=0.55 ipTM=0.687 tol=2.73
2024-12-08 13:53:08,041 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=58.2 pTM=0.551 ipTM=0.674 tol=3.76
2024-12-08 13:53:38,346 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=58.3 pTM=0.552 ipTM=0.686 tol=3.97
2024-12-08 13:54:08,636 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=58.3 pTM=0.551 ipTM=0.677 tol=2.58
2024-12-08 13:54:38,936 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=58.3 pTM=0.553 ipTM=0.697 tol=1.95
2024-12-08 13:55:09,229 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=58.5 pTM=0.557 ipTM=0.7 tol=1.85
2024-12-08 13:55:39,511 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=58.4 pTM=0.557 ipTM=0.702 tol=2.08
2024-12-08 13:56:09,781 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=58.6 pTM=0.561 ipTM=0.709 tol=3.35
2024-12-08 13:56:40,099 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=58.6 pTM=0.561 ipTM=0.717 tol=2.72
2024-12-08 13:57:10,369 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=58.6 pTM=0.559 ipTM=0.709 tol=1.57
2024-12-08 13:57:40,648 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=58.5 pTM=0.558 ipTM=0.714 tol=1.59
2024-12-08 13:58:10,916 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=58.6 pTM=0.559 ipTM=0.718 tol=1.78
2024-12-08 13:58:41,192 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=58.6 pTM=0.558 ipTM=0.714 tol=2.46
2024-12-08 13:59:11,497 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=58.6 pTM=0.558 ipTM=0.712 tol=1.98
2024-12-08 13:59:41,798 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=58.6 pTM=0.558 ipTM=0.716 tol=2.24
2024-12-08 14:00:12,083 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=58.6 pTM=0.561 ipTM=0.721 tol=2.9
2024-12-08 14:00:42,371 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=58.5 pTM=0.56 ipTM=0.722 tol=2.98
2024-12-08 14:00:42,372 alphafold2_multimer_v3_model_4_seed_000 took 939.4s (30 recycles)
2024-12-08 14:01:13,565 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=54.1 pTM=0.473 ipTM=0.423
2024-12-08 14:01:43,911 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=55.3 pTM=0.437 ipTM=0.229 tol=16.4
2024-12-08 14:02:14,321 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=55.4 pTM=0.42 ipTM=0.208 tol=12
2024-12-08 14:02:44,746 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=55.2 pTM=0.43 ipTM=0.23 tol=10.7
2024-12-08 14:03:15,160 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=55.7 pTM=0.435 ipTM=0.526 tol=11.9
2024-12-08 14:03:45,535 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=55.1 pTM=0.453 ipTM=0.429 tol=9.3
2024-12-08 14:04:15,914 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=55.7 pTM=0.445 ipTM=0.428 tol=7.13
2024-12-08 14:04:46,279 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=55.4 pTM=0.459 ipTM=0.395 tol=6.08
2024-12-08 14:05:16,664 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=55.9 pTM=0.453 ipTM=0.397 tol=4.21
2024-12-08 14:05:47,011 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=55.6 pTM=0.449 ipTM=0.385 tol=6.13
2024-12-08 14:06:17,406 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=55.8 pTM=0.449 ipTM=0.421 tol=6.98
2024-12-08 14:06:47,782 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=55.8 pTM=0.449 ipTM=0.349 tol=4.97
2024-12-08 14:07:18,190 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=55.8 pTM=0.454 ipTM=0.422 tol=12.2
2024-12-08 14:07:48,528 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=57.1 pTM=0.513 ipTM=0.521 tol=8.66
2024-12-08 14:08:18,851 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=57.4 pTM=0.526 ipTM=0.573 tol=6.43
2024-12-08 14:08:49,178 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=57.5 pTM=0.536 ipTM=0.609 tol=5.38
2024-12-08 14:09:19,490 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=57.5 pTM=0.53 ipTM=0.59 tol=5.02
2024-12-08 14:09:49,799 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=57.5 pTM=0.53 ipTM=0.59 tol=5.46
2024-12-08 14:10:20,111 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=57.6 pTM=0.531 ipTM=0.589 tol=5.29
2024-12-08 14:10:50,442 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=57.5 pTM=0.536 ipTM=0.618 tol=4.66
2024-12-08 14:11:20,738 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=57.6 pTM=0.533 ipTM=0.597 tol=8.76
2024-12-08 14:11:51,025 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=57.5 pTM=0.529 ipTM=0.584 tol=3.69
2024-12-08 14:12:21,320 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=57.6 pTM=0.528 ipTM=0.576 tol=5.32
2024-12-08 14:12:51,620 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=57.4 pTM=0.526 ipTM=0.572 tol=3.13
2024-12-08 14:13:21,919 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=57.1 pTM=0.515 ipTM=0.536 tol=4.81
2024-12-08 14:13:52,249 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=57.4 pTM=0.53 ipTM=0.598 tol=3.64
2024-12-08 14:14:22,553 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=57.6 pTM=0.527 ipTM=0.572 tol=8.37
2024-12-08 14:14:52,837 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=57.5 pTM=0.529 ipTM=0.589 tol=7.92
2024-12-08 14:15:23,151 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=57.6 pTM=0.524 ipTM=0.562 tol=2.84
2024-12-08 14:15:53,460 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=57.5 pTM=0.529 ipTM=0.59 tol=7.21
2024-12-08 14:16:23,764 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=57 pTM=0.515 ipTM=0.533 tol=3.28
2024-12-08 14:16:23,765 alphafold2_multimer_v3_model_5_seed_000 took 940.5s (30 recycles)
2024-12-08 14:16:24,650 reranking models by 'multimer' metric
2024-12-08 14:16:27,620 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 14:18:20,080 Relaxation took 115.4s
2024-12-08 14:18:20,080 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=58.5 pTM=0.56 ipTM=0.722
2024-12-08 14:20:00,737 Relaxation took 100.7s
2024-12-08 14:20:00,737 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=59.1 pTM=0.559 ipTM=0.666
2024-12-08 14:21:46,459 Relaxation took 105.7s
2024-12-08 14:21:46,459 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=57.4 pTM=0.526 ipTM=0.6
2024-12-08 14:23:32,774 Relaxation took 106.3s
2024-12-08 14:23:32,774 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=58.4 pTM=0.526 ipTM=0.59
2024-12-08 14:25:17,167 Relaxation took 104.4s
2024-12-08 14:25:17,167 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=57 pTM=0.515 ipTM=0.533
2024-12-08 14:25:19,519 Done