2024-12-08 13:20:12,294 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 13:20:12,639 Running on GPU
2024-12-08 13:20:13,472 Found 6 citations for tools or databases
2024-12-08 13:20:13,472 Query 1/1: SNRNP40_CD2BP2 (length 698)
2024-12-08 13:20:14,651 Sleeping for 5s. Reason: PENDING
2024-12-08 13:20:19,904 Sleeping for 6s. Reason: PENDING
2024-12-08 13:20:26,161 Sleeping for 6s. Reason: PENDING
2024-12-08 13:20:32,414 Sleeping for 5s. Reason: RUNNING
2024-12-08 13:20:37,668 Sleeping for 7s. Reason: RUNNING
2024-12-08 13:20:44,920 Sleeping for 7s. Reason: RUNNING
2024-12-08 13:20:52,179 Sleeping for 8s. Reason: RUNNING
2024-12-08 13:21:00,438 Sleeping for 5s. Reason: RUNNING
2024-12-08 13:21:05,693 Sleeping for 9s. Reason: RUNNING
2024-12-08 13:21:14,955 Sleeping for 10s. Reason: RUNNING
2024-12-08 13:21:25,210 Sleeping for 6s. Reason: RUNNING
2024-12-08 13:21:31,464 Sleeping for 7s. Reason: RUNNING
2024-12-08 13:21:38,720 Sleeping for 8s. Reason: RUNNING
2024-12-08 13:21:46,981 Sleeping for 6s. Reason: RUNNING
2024-12-08 13:21:55,948 Setting max_seq=508, max_extra_seq=2048
2024-12-08 13:25:13,758 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=60.2 pTM=0.511 ipTM=0.29
2024-12-08 13:25:26,622 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=60.4 pTM=0.509 ipTM=0.183 tol=7.65
2024-12-08 13:25:39,488 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=60.6 pTM=0.513 ipTM=0.231 tol=6.49
2024-12-08 13:25:52,372 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=60.6 pTM=0.514 ipTM=0.236 tol=3.9
2024-12-08 13:26:05,261 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=60.9 pTM=0.511 ipTM=0.233 tol=2.85
2024-12-08 13:26:18,132 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=61 pTM=0.512 ipTM=0.264 tol=3.09
2024-12-08 13:26:31,010 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=61 pTM=0.511 ipTM=0.233 tol=2.52
2024-12-08 13:26:43,895 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=61.2 pTM=0.519 ipTM=0.284 tol=4.79
2024-12-08 13:26:56,791 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=61.3 pTM=0.515 ipTM=0.258 tol=3.08
2024-12-08 13:27:09,676 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=61.3 pTM=0.519 ipTM=0.338 tol=2.21
2024-12-08 13:27:22,583 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=61.2 pTM=0.515 ipTM=0.258 tol=1.35
2024-12-08 13:27:35,494 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=62.1 pTM=0.518 ipTM=0.301 tol=1.71
2024-12-08 13:27:48,396 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=61.3 pTM=0.514 ipTM=0.26 tol=1.24
2024-12-08 13:28:01,330 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=61 pTM=0.52 ipTM=0.291 tol=3.09
2024-12-08 13:28:14,195 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60.8 pTM=0.516 ipTM=0.255 tol=2.63
2024-12-08 13:28:27,097 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=61.5 pTM=0.523 ipTM=0.286 tol=2.56
2024-12-08 13:28:39,998 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=61.4 pTM=0.517 ipTM=0.246 tol=1.48
2024-12-08 13:28:52,915 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=61.4 pTM=0.523 ipTM=0.301 tol=1.75
2024-12-08 13:29:05,829 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=61.3 pTM=0.518 ipTM=0.251 tol=1.43
2024-12-08 13:29:18,737 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=61.2 pTM=0.519 ipTM=0.27 tol=2.79
2024-12-08 13:29:31,639 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=61.3 pTM=0.516 ipTM=0.232 tol=2.31
2024-12-08 13:29:44,538 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=61.5 pTM=0.52 ipTM=0.313 tol=1.7
2024-12-08 13:29:57,454 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=61.2 pTM=0.518 ipTM=0.248 tol=1.32
2024-12-08 13:30:10,349 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=61.1 pTM=0.52 ipTM=0.281 tol=2.79
2024-12-08 13:30:23,242 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=61.1 pTM=0.519 ipTM=0.259 tol=1.39
2024-12-08 13:30:36,185 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=61.6 pTM=0.521 ipTM=0.296 tol=1.54
2024-12-08 13:30:49,101 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=61.7 pTM=0.523 ipTM=0.25 tol=3.15
2024-12-08 13:31:02,015 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=61.1 pTM=0.522 ipTM=0.324 tol=4.85
2024-12-08 13:31:14,942 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=61.2 pTM=0.517 ipTM=0.245 tol=1.75
2024-12-08 13:31:27,840 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=61.2 pTM=0.523 ipTM=0.321 tol=1.4
2024-12-08 13:31:40,765 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=61.3 pTM=0.52 ipTM=0.244 tol=1.79
2024-12-08 13:31:40,766 alphafold2_multimer_v3_model_1_seed_000 took 577.9s (30 recycles)
2024-12-08 13:31:54,107 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=60.9 pTM=0.5 ipTM=0.152
2024-12-08 13:32:07,072 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=62 pTM=0.495 ipTM=0.169 tol=9.14
2024-12-08 13:32:20,065 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=62.1 pTM=0.501 ipTM=0.186 tol=6.15
2024-12-08 13:32:33,061 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=62.3 pTM=0.501 ipTM=0.235 tol=5.3
2024-12-08 13:32:46,068 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=62 pTM=0.507 ipTM=0.384 tol=5.55
2024-12-08 13:32:59,046 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=62.2 pTM=0.502 ipTM=0.221 tol=3.55
2024-12-08 13:33:12,033 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62.2 pTM=0.502 ipTM=0.22 tol=3.21
2024-12-08 13:33:25,008 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=62.3 pTM=0.505 ipTM=0.248 tol=2.56
2024-12-08 13:33:38,007 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=62 pTM=0.501 ipTM=0.209 tol=2.43
2024-12-08 13:33:50,977 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=62.6 pTM=0.504 ipTM=0.284 tol=2.47
2024-12-08 13:34:03,943 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=62 pTM=0.499 ipTM=0.196 tol=2.54
2024-12-08 13:34:16,934 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=62.7 pTM=0.504 ipTM=0.258 tol=3.03
2024-12-08 13:34:29,900 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=61.8 pTM=0.499 ipTM=0.203 tol=2.55
2024-12-08 13:34:42,877 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=62.1 pTM=0.503 ipTM=0.197 tol=2.17
2024-12-08 13:34:55,876 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=62.1 pTM=0.504 ipTM=0.211 tol=2.38
2024-12-08 13:35:08,863 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=62.9 pTM=0.504 ipTM=0.214 tol=4.25
2024-12-08 13:35:21,835 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=62.2 pTM=0.503 ipTM=0.222 tol=2.34
2024-12-08 13:35:34,822 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62.6 pTM=0.504 ipTM=0.202 tol=2.32
2024-12-08 13:35:47,786 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=62 pTM=0.503 ipTM=0.203 tol=3.39
2024-12-08 13:36:00,786 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=62.5 pTM=0.504 ipTM=0.211 tol=2.67
2024-12-08 13:36:13,743 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=62.1 pTM=0.503 ipTM=0.203 tol=3.58
2024-12-08 13:36:26,731 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=62.2 pTM=0.504 ipTM=0.182 tol=3.17
2024-12-08 13:36:39,723 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=62.1 pTM=0.507 ipTM=0.19 tol=2.54
2024-12-08 13:36:52,694 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.3 pTM=0.506 ipTM=0.21 tol=4.54
2024-12-08 13:37:05,662 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=62.2 pTM=0.507 ipTM=0.214 tol=2.75
2024-12-08 13:37:18,642 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=62.5 pTM=0.507 ipTM=0.229 tol=3.3
2024-12-08 13:37:31,618 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=62.2 pTM=0.509 ipTM=0.209 tol=2.94
2024-12-08 13:37:44,599 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.5 pTM=0.506 ipTM=0.186 tol=2.65
2024-12-08 13:37:57,581 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=62.2 pTM=0.506 ipTM=0.214 tol=2.26
2024-12-08 13:38:10,573 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=62.2 pTM=0.508 ipTM=0.241 tol=2.44
2024-12-08 13:38:23,532 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=62 pTM=0.505 ipTM=0.224 tol=3.15
2024-12-08 13:38:23,533 alphafold2_multimer_v3_model_2_seed_000 took 402.4s (30 recycles)
2024-12-08 13:38:36,873 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=61.3 pTM=0.526 ipTM=0.236
2024-12-08 13:38:49,908 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=62.8 pTM=0.499 ipTM=0.169 tol=13.5
2024-12-08 13:39:02,899 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=62.7 pTM=0.504 ipTM=0.167 tol=9.35
2024-12-08 13:39:15,891 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=61.7 pTM=0.505 ipTM=0.141 tol=6.02
2024-12-08 13:39:28,886 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=61.9 pTM=0.506 ipTM=0.21 tol=5.68
2024-12-08 13:39:41,887 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=61.7 pTM=0.502 ipTM=0.153 tol=6.75
2024-12-08 13:39:54,891 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=62.1 pTM=0.507 ipTM=0.169 tol=7.95
2024-12-08 13:40:07,892 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=62.3 pTM=0.511 ipTM=0.204 tol=6.2
2024-12-08 13:40:20,867 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61.7 pTM=0.508 ipTM=0.177 tol=9.34
2024-12-08 13:40:33,875 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=61.6 pTM=0.502 ipTM=0.165 tol=8.05
2024-12-08 13:40:46,888 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=61.9 pTM=0.505 ipTM=0.173 tol=4.1
2024-12-08 13:40:59,932 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=62.2 pTM=0.503 ipTM=0.182 tol=9.95
2024-12-08 13:41:12,988 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=61.5 pTM=0.502 ipTM=0.178 tol=10.2
2024-12-08 13:41:26,011 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=61.6 pTM=0.502 ipTM=0.163 tol=12.4
2024-12-08 13:41:39,049 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=61.6 pTM=0.503 ipTM=0.17 tol=9.17
2024-12-08 13:41:52,066 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=61.8 pTM=0.503 ipTM=0.154 tol=7.12
2024-12-08 13:42:05,082 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=61.4 pTM=0.511 ipTM=0.165 tol=5.73
2024-12-08 13:42:18,107 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61.3 pTM=0.507 ipTM=0.165 tol=6.51
2024-12-08 13:42:31,116 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=61.5 pTM=0.507 ipTM=0.162 tol=7.38
2024-12-08 13:42:44,114 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61.4 pTM=0.518 ipTM=0.19 tol=4.07
2024-12-08 13:42:57,116 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=61.9 pTM=0.506 ipTM=0.168 tol=3.98
2024-12-08 13:43:10,110 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=61.2 pTM=0.518 ipTM=0.187 tol=3.45
2024-12-08 13:43:23,114 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=62.2 pTM=0.517 ipTM=0.223 tol=7.88
2024-12-08 13:43:36,124 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=61.9 pTM=0.52 ipTM=0.185 tol=4.09
2024-12-08 13:43:49,117 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.8 pTM=0.513 ipTM=0.184 tol=2.96
2024-12-08 13:44:02,120 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61.9 pTM=0.522 ipTM=0.188 tol=3.34
2024-12-08 13:44:15,144 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=62 pTM=0.511 ipTM=0.188 tol=8.32
2024-12-08 13:44:28,135 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=62 pTM=0.516 ipTM=0.208 tol=10
2024-12-08 13:44:41,141 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=61.8 pTM=0.512 ipTM=0.176 tol=9.29
2024-12-08 13:44:54,174 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=62.3 pTM=0.507 ipTM=0.175 tol=4.72
2024-12-08 13:45:07,177 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=61.7 pTM=0.511 ipTM=0.175 tol=4.08
2024-12-08 13:45:07,177 alphafold2_multimer_v3_model_3_seed_000 took 403.2s (30 recycles)
2024-12-08 13:45:20,499 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=60.1 pTM=0.509 ipTM=0.288
2024-12-08 13:45:33,517 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=60.4 pTM=0.496 ipTM=0.175 tol=7.14
2024-12-08 13:45:46,488 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=60.1 pTM=0.497 ipTM=0.171 tol=5.1
2024-12-08 13:45:59,471 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=59.7 pTM=0.5 ipTM=0.15 tol=5.7
2024-12-08 13:46:12,470 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=59.7 pTM=0.5 ipTM=0.139 tol=4.16
2024-12-08 13:46:25,442 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=59.5 pTM=0.496 ipTM=0.134 tol=4.98
2024-12-08 13:46:38,405 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=59.7 pTM=0.503 ipTM=0.169 tol=7.2
2024-12-08 13:46:51,366 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=60.1 pTM=0.5 ipTM=0.44 tol=12.2
2024-12-08 13:47:04,325 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=59.8 pTM=0.499 ipTM=0.138 tol=6.63
2024-12-08 13:47:17,292 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=59.8 pTM=0.496 ipTM=0.144 tol=7.21
2024-12-08 13:47:30,271 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=59.7 pTM=0.498 ipTM=0.141 tol=5.71
2024-12-08 13:47:43,234 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=60.1 pTM=0.501 ipTM=0.141 tol=8.03
2024-12-08 13:47:56,180 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=59.6 pTM=0.504 ipTM=0.189 tol=4.67
2024-12-08 13:48:09,148 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=59.7 pTM=0.503 ipTM=0.237 tol=4.21
2024-12-08 13:48:22,108 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=59.8 pTM=0.502 ipTM=0.164 tol=5.48
2024-12-08 13:48:35,078 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=60.1 pTM=0.494 ipTM=0.138 tol=5.19
2024-12-08 13:48:48,066 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=59.9 pTM=0.498 ipTM=0.143 tol=4.69
2024-12-08 13:49:01,054 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=59.6 pTM=0.499 ipTM=0.143 tol=6.72
2024-12-08 13:49:14,045 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=59.8 pTM=0.502 ipTM=0.146 tol=5.49
2024-12-08 13:49:27,032 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=59.7 pTM=0.499 ipTM=0.135 tol=6.63
2024-12-08 13:49:39,993 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=59.7 pTM=0.507 ipTM=0.183 tol=6.93
2024-12-08 13:49:52,980 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=59.9 pTM=0.503 ipTM=0.188 tol=8.16
2024-12-08 13:50:05,976 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=60.2 pTM=0.512 ipTM=0.223 tol=6.04
2024-12-08 13:50:18,953 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=60.1 pTM=0.508 ipTM=0.193 tol=6.69
2024-12-08 13:50:31,921 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=60 pTM=0.509 ipTM=0.173 tol=7.39
2024-12-08 13:50:44,897 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60.8 pTM=0.511 ipTM=0.193 tol=6.29
2024-12-08 13:50:57,875 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=60.7 pTM=0.511 ipTM=0.171 tol=4.72
2024-12-08 13:51:10,832 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=60.3 pTM=0.51 ipTM=0.182 tol=4.88
2024-12-08 13:51:23,803 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=60.4 pTM=0.515 ipTM=0.179 tol=2.36
2024-12-08 13:51:36,785 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=60.6 pTM=0.514 ipTM=0.181 tol=3.39
2024-12-08 13:51:49,754 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=60.4 pTM=0.519 ipTM=0.188 tol=3.37
2024-12-08 13:51:49,754 alphafold2_multimer_v3_model_4_seed_000 took 402.2s (30 recycles)
2024-12-08 13:52:03,143 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=61.5 pTM=0.495 ipTM=0.179
2024-12-08 13:52:16,139 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=62.2 pTM=0.496 ipTM=0.134 tol=7.17
2024-12-08 13:52:29,159 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=62.1 pTM=0.491 ipTM=0.157 tol=8.33
2024-12-08 13:52:42,192 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=62.3 pTM=0.491 ipTM=0.142 tol=6.6
2024-12-08 13:52:55,207 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=62.6 pTM=0.492 ipTM=0.151 tol=6.98
2024-12-08 13:53:08,208 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=62.4 pTM=0.494 ipTM=0.159 tol=4.09
2024-12-08 13:53:21,212 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=62.3 pTM=0.496 ipTM=0.164 tol=4.53
2024-12-08 13:53:34,203 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=62.5 pTM=0.494 ipTM=0.176 tol=2.6
2024-12-08 13:53:47,196 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=62.2 pTM=0.494 ipTM=0.197 tol=3.29
2024-12-08 13:54:00,194 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=62.2 pTM=0.492 ipTM=0.174 tol=3.54
2024-12-08 13:54:13,205 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=62.3 pTM=0.494 ipTM=0.155 tol=2.26
2024-12-08 13:54:26,200 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=62.7 pTM=0.494 ipTM=0.166 tol=2.42
2024-12-08 13:54:39,217 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=62.3 pTM=0.495 ipTM=0.169 tol=3.06
2024-12-08 13:54:52,236 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=62.4 pTM=0.492 ipTM=0.161 tol=1.68
2024-12-08 13:55:05,251 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=62.1 pTM=0.493 ipTM=0.171 tol=2.69
2024-12-08 13:55:18,281 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=62.9 pTM=0.495 ipTM=0.173 tol=2.95
2024-12-08 13:55:31,292 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=62.4 pTM=0.498 ipTM=0.292 tol=2.4
2024-12-08 13:55:44,302 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=62.2 pTM=0.492 ipTM=0.203 tol=3.22
2024-12-08 13:55:57,312 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=62.4 pTM=0.491 ipTM=0.169 tol=3.63
2024-12-08 13:56:10,307 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=62.2 pTM=0.493 ipTM=0.199 tol=2.76
2024-12-08 13:56:23,291 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=62.3 pTM=0.5 ipTM=0.283 tol=2.44
2024-12-08 13:56:36,288 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=62.2 pTM=0.492 ipTM=0.187 tol=2.34
2024-12-08 13:56:49,299 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=62.3 pTM=0.493 ipTM=0.154 tol=4.2
2024-12-08 13:57:02,301 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=62.4 pTM=0.498 ipTM=0.189 tol=3.66
2024-12-08 13:57:15,294 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=62.4 pTM=0.5 ipTM=0.273 tol=3.06
2024-12-08 13:57:28,305 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=62.4 pTM=0.493 ipTM=0.177 tol=3.35
2024-12-08 13:57:41,303 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=62.2 pTM=0.496 ipTM=0.166 tol=3.46
2024-12-08 13:57:54,300 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=62.4 pTM=0.495 ipTM=0.186 tol=2.58
2024-12-08 13:58:07,309 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=62.2 pTM=0.494 ipTM=0.161 tol=2.99
2024-12-08 13:58:20,304 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=62.2 pTM=0.493 ipTM=0.183 tol=1.96
2024-12-08 13:58:33,301 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=62.2 pTM=0.496 ipTM=0.189 tol=2.66
2024-12-08 13:58:33,302 alphafold2_multimer_v3_model_5_seed_000 took 403.2s (30 recycles)
2024-12-08 13:58:33,697 reranking models by 'multimer' metric
2024-12-08 13:58:36,646 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 13:59:34,026 Relaxation took 60.3s
2024-12-08 13:59:34,026 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=61.3 pTM=0.52 ipTM=0.244
2024-12-08 14:00:21,141 Relaxation took 47.1s
2024-12-08 14:00:21,141 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=62 pTM=0.505 ipTM=0.224
2024-12-08 14:01:28,625 Relaxation took 67.5s
2024-12-08 14:01:28,625 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=60.4 pTM=0.519 ipTM=0.188
2024-12-08 14:01:46,732 Relaxation took 18.1s
2024-12-08 14:01:46,732 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=62.2 pTM=0.496 ipTM=0.189
2024-12-08 14:02:26,394 Relaxation took 39.7s
2024-12-08 14:02:26,394 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=61.7 pTM=0.511 ipTM=0.175
2024-12-08 14:02:27,989 Done