2024-12-08 13:25:01,697 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 13:25:01,994 Running on GPU
2024-12-08 13:25:04,211 Found 6 citations for tools or databases
2024-12-08 13:25:04,212 Query 1/1: SOCS3_PLS1 (length 854)
2024-12-08 13:25:04,486 Sleeping for 6s. Reason: PENDING
2024-12-08 13:25:10,741 Sleeping for 10s. Reason: RUNNING
2024-12-08 13:25:20,995 Sleeping for 6s. Reason: RUNNING
2024-12-08 13:25:27,246 Sleeping for 9s. Reason: RUNNING
2024-12-08 13:25:36,511 Sleeping for 5s. Reason: RUNNING
2024-12-08 13:25:41,766 Sleeping for 6s. Reason: RUNNING
2024-12-08 13:25:48,036 Sleeping for 10s. Reason: RUNNING
2024-12-08 13:25:58,291 Sleeping for 6s. Reason: RUNNING
2024-12-08 13:26:04,546 Sleeping for 6s. Reason: RUNNING
2024-12-08 13:26:10,798 Sleeping for 5s. Reason: RUNNING
2024-12-08 13:26:16,049 Sleeping for 10s. Reason: RUNNING
2024-12-08 13:26:26,311 Sleeping for 9s. Reason: RUNNING
2024-12-08 13:26:35,565 Sleeping for 9s. Reason: RUNNING
2024-12-08 13:26:44,825 Sleeping for 8s. Reason: RUNNING
2024-12-08 13:26:53,086 Sleeping for 10s. Reason: RUNNING
2024-12-08 13:27:03,354 Sleeping for 5s. Reason: RUNNING
2024-12-08 13:27:08,611 Sleeping for 10s. Reason: RUNNING
2024-12-08 13:27:18,873 Sleeping for 8s. Reason: RUNNING
2024-12-08 13:27:27,135 Sleeping for 5s. Reason: RUNNING
2024-12-08 13:27:34,007 Sleeping for 10s. Reason: PENDING
2024-12-08 13:27:44,270 Sleeping for 7s. Reason: PENDING
2024-12-08 13:27:51,527 Sleeping for 10s. Reason: PENDING
2024-12-08 13:28:01,788 Sleeping for 6s. Reason: PENDING
2024-12-08 13:28:08,051 Sleeping for 5s. Reason: PENDING
2024-12-08 13:28:13,301 Sleeping for 6s. Reason: PENDING
2024-12-08 13:28:19,558 Sleeping for 7s. Reason: PENDING
2024-12-08 13:28:26,814 Sleeping for 5s. Reason: PENDING
2024-12-08 13:28:32,233 Sleeping for 7s. Reason: RUNNING
2024-12-08 13:28:39,496 Sleeping for 6s. Reason: RUNNING
2024-12-08 13:28:45,753 Sleeping for 5s. Reason: RUNNING
2024-12-08 13:28:51,009 Sleeping for 9s. Reason: RUNNING
2024-12-08 13:29:00,271 Sleeping for 10s. Reason: RUNNING
2024-12-08 13:29:10,530 Sleeping for 7s. Reason: RUNNING
2024-12-08 13:29:17,785 Sleeping for 7s. Reason: RUNNING
2024-12-08 13:29:25,034 Sleeping for 10s. Reason: RUNNING
2024-12-08 13:29:35,292 Sleeping for 8s. Reason: RUNNING
2024-12-08 13:29:43,546 Sleeping for 10s. Reason: RUNNING
2024-12-08 13:29:53,805 Sleeping for 7s. Reason: RUNNING
2024-12-08 13:30:01,066 Sleeping for 5s. Reason: RUNNING
2024-12-08 13:30:09,192 Setting max_seq=508, max_extra_seq=2048
2024-12-08 13:32:52,529 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=72 pTM=0.613 ipTM=0.161
2024-12-08 13:33:08,939 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=72 pTM=0.611 ipTM=0.151 tol=7.71
2024-12-08 13:33:25,386 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=71.6 pTM=0.609 ipTM=0.155 tol=5.45
2024-12-08 13:33:41,898 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=71.2 pTM=0.606 ipTM=0.159 tol=3.28
2024-12-08 13:33:58,414 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=71.2 pTM=0.605 ipTM=0.313 tol=6.72
2024-12-08 13:34:14,932 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=70.6 pTM=0.602 ipTM=0.163 tol=2.73
2024-12-08 13:34:31,491 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=70.3 pTM=0.605 ipTM=0.149 tol=5.46
2024-12-08 13:34:48,054 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=70.3 pTM=0.604 ipTM=0.156 tol=3.19
2024-12-08 13:35:04,607 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=70.6 pTM=0.604 ipTM=0.153 tol=2.95
2024-12-08 13:35:21,163 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=71.2 pTM=0.605 ipTM=0.155 tol=2.88
2024-12-08 13:35:37,757 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=70.9 pTM=0.607 ipTM=0.159 tol=2.43
2024-12-08 13:35:54,332 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=70.9 pTM=0.604 ipTM=0.258 tol=4.52
2024-12-08 13:36:10,904 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=71.2 pTM=0.606 ipTM=0.154 tol=1.65
2024-12-08 13:36:27,489 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=70.6 pTM=0.605 ipTM=0.164 tol=3.55
2024-12-08 13:36:44,069 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=71 pTM=0.604 ipTM=0.157 tol=1.38
2024-12-08 13:37:00,653 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=71.4 pTM=0.605 ipTM=0.284 tol=2.75
2024-12-08 13:37:17,232 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=71.4 pTM=0.607 ipTM=0.156 tol=1.98
2024-12-08 13:37:33,820 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=70.4 pTM=0.604 ipTM=0.157 tol=2.59
2024-12-08 13:37:50,387 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=71.2 pTM=0.607 ipTM=0.163 tol=1.17
2024-12-08 13:38:06,994 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=70.6 pTM=0.604 ipTM=0.166 tol=1.42
2024-12-08 13:38:23,602 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=70.6 pTM=0.603 ipTM=0.161 tol=1.03
2024-12-08 13:38:40,192 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=70.5 pTM=0.604 ipTM=0.172 tol=1.53
2024-12-08 13:38:56,804 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=70.8 pTM=0.605 ipTM=0.173 tol=2.63
2024-12-08 13:39:13,414 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=70.8 pTM=0.608 ipTM=0.153 tol=1.31
2024-12-08 13:39:30,024 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=70.9 pTM=0.606 ipTM=0.16 tol=1.25
2024-12-08 13:39:46,600 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=70.4 pTM=0.604 ipTM=0.16 tol=1.53
2024-12-08 13:40:03,218 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=71.2 pTM=0.607 ipTM=0.158 tol=1.77
2024-12-08 13:40:19,841 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=70.7 pTM=0.607 ipTM=0.161 tol=1.55
2024-12-08 13:40:36,431 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=70.7 pTM=0.608 ipTM=0.165 tol=0.946
2024-12-08 13:40:53,028 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=70.6 pTM=0.606 ipTM=0.16 tol=1.11
2024-12-08 13:41:09,637 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=70.7 pTM=0.607 ipTM=0.176 tol=1.04
2024-12-08 13:41:09,638 alphafold2_multimer_v3_model_1_seed_000 took 654.7s (30 recycles)
2024-12-08 13:41:26,674 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=72.9 pTM=0.633 ipTM=0.225
2024-12-08 13:41:43,349 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=72.5 pTM=0.612 ipTM=0.146 tol=7.74
2024-12-08 13:42:00,010 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=73.1 pTM=0.609 ipTM=0.146 tol=5.48
2024-12-08 13:42:16,657 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=72.8 pTM=0.606 ipTM=0.172 tol=2.67
2024-12-08 13:42:33,297 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=73.6 pTM=0.61 ipTM=0.174 tol=3.47
2024-12-08 13:42:49,940 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=72.8 pTM=0.608 ipTM=0.157 tol=1.33
2024-12-08 13:43:06,581 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=73.4 pTM=0.609 ipTM=0.16 tol=0.785
2024-12-08 13:43:23,201 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=73.1 pTM=0.608 ipTM=0.158 tol=1.33
2024-12-08 13:43:39,837 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=73.2 pTM=0.609 ipTM=0.154 tol=2.05
2024-12-08 13:43:56,475 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=74.5 pTM=0.611 ipTM=0.315 tol=2.56
2024-12-08 13:44:13,145 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=74.1 pTM=0.613 ipTM=0.21 tol=1.17
2024-12-08 13:44:29,806 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=73.4 pTM=0.611 ipTM=0.178 tol=1.56
2024-12-08 13:44:46,467 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=73.4 pTM=0.61 ipTM=0.179 tol=1.06
2024-12-08 13:45:03,114 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=73.4 pTM=0.61 ipTM=0.191 tol=1.23
2024-12-08 13:45:19,739 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=73.4 pTM=0.609 ipTM=0.19 tol=1.44
2024-12-08 13:45:36,382 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=73.3 pTM=0.611 ipTM=0.159 tol=1.95
2024-12-08 13:45:53,028 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=73.3 pTM=0.611 ipTM=0.166 tol=1.37
2024-12-08 13:46:09,676 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=73.1 pTM=0.609 ipTM=0.162 tol=0.979
2024-12-08 13:46:26,327 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=73.3 pTM=0.61 ipTM=0.23 tol=1.81
2024-12-08 13:46:42,933 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=73.2 pTM=0.61 ipTM=0.19 tol=1.1
2024-12-08 13:46:59,547 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=72.8 pTM=0.605 ipTM=0.221 tol=0.94
2024-12-08 13:47:16,193 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=73.2 pTM=0.609 ipTM=0.203 tol=0.723
2024-12-08 13:47:32,836 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=72.9 pTM=0.609 ipTM=0.181 tol=0.818
2024-12-08 13:47:49,461 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=73.1 pTM=0.61 ipTM=0.174 tol=0.571
2024-12-08 13:48:06,107 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=72.8 pTM=0.606 ipTM=0.155 tol=1.2
2024-12-08 13:48:22,720 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=73.1 pTM=0.608 ipTM=0.187 tol=0.998
2024-12-08 13:48:39,361 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=72.9 pTM=0.606 ipTM=0.164 tol=0.997
2024-12-08 13:48:55,992 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=72.8 pTM=0.608 ipTM=0.158 tol=1.08
2024-12-08 13:49:12,619 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=73.3 pTM=0.608 ipTM=0.186 tol=1.25
2024-12-08 13:49:29,253 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=73.6 pTM=0.61 ipTM=0.196 tol=0.713
2024-12-08 13:49:45,883 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=73.3 pTM=0.608 ipTM=0.173 tol=1.03
2024-12-08 13:49:45,884 alphafold2_multimer_v3_model_2_seed_000 took 515.8s (30 recycles)
2024-12-08 13:50:03,016 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=73.2 pTM=0.614 ipTM=0.149
2024-12-08 13:50:19,761 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=72.2 pTM=0.615 ipTM=0.139 tol=11.6
2024-12-08 13:50:36,467 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=70.9 pTM=0.614 ipTM=0.145 tol=5.09
2024-12-08 13:50:53,165 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=71 pTM=0.614 ipTM=0.148 tol=2.83
2024-12-08 13:51:09,878 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=71.3 pTM=0.615 ipTM=0.15 tol=2.55
2024-12-08 13:51:26,564 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=70.8 pTM=0.611 ipTM=0.136 tol=3.3
2024-12-08 13:51:43,281 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=71.8 pTM=0.614 ipTM=0.141 tol=1.57
2024-12-08 13:51:59,992 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=72 pTM=0.617 ipTM=0.149 tol=2.54
2024-12-08 13:52:16,670 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=71.4 pTM=0.616 ipTM=0.153 tol=3.68
2024-12-08 13:52:33,360 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=71.7 pTM=0.612 ipTM=0.143 tol=3.2
2024-12-08 13:52:50,027 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=71.8 pTM=0.613 ipTM=0.149 tol=2.27
2024-12-08 13:53:06,690 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=71.2 pTM=0.609 ipTM=0.143 tol=1.8
2024-12-08 13:53:23,408 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=71.6 pTM=0.616 ipTM=0.153 tol=2.23
2024-12-08 13:53:40,068 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=71.2 pTM=0.614 ipTM=0.158 tol=3.27
2024-12-08 13:53:56,725 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=71.6 pTM=0.61 ipTM=0.141 tol=3.23
2024-12-08 13:54:13,405 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=71.5 pTM=0.611 ipTM=0.139 tol=1.62
2024-12-08 13:54:30,057 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=71.4 pTM=0.614 ipTM=0.152 tol=2.61
2024-12-08 13:54:46,686 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=70.9 pTM=0.607 ipTM=0.142 tol=2.39
2024-12-08 13:55:03,346 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=71.4 pTM=0.615 ipTM=0.16 tol=3.23
2024-12-08 13:55:20,041 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=71.6 pTM=0.613 ipTM=0.151 tol=5.23
2024-12-08 13:55:36,673 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=71.1 pTM=0.61 ipTM=0.155 tol=6.46
2024-12-08 13:55:53,297 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=71 pTM=0.609 ipTM=0.15 tol=5.71
2024-12-08 13:56:09,953 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=71.3 pTM=0.614 ipTM=0.156 tol=1.98
2024-12-08 13:56:26,620 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=71.3 pTM=0.614 ipTM=0.151 tol=1.25
2024-12-08 13:56:43,275 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=71.1 pTM=0.613 ipTM=0.155 tol=2.29
2024-12-08 13:56:59,911 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=71.2 pTM=0.611 ipTM=0.153 tol=1.83
2024-12-08 13:57:16,572 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=71.3 pTM=0.609 ipTM=0.139 tol=3.02
2024-12-08 13:57:33,271 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=71.4 pTM=0.612 ipTM=0.147 tol=1.57
2024-12-08 13:57:49,940 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=71.2 pTM=0.612 ipTM=0.149 tol=2.2
2024-12-08 13:58:06,581 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=71.6 pTM=0.61 ipTM=0.143 tol=1.64
2024-12-08 13:58:23,204 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=71.3 pTM=0.616 ipTM=0.167 tol=1.37
2024-12-08 13:58:23,205 alphafold2_multimer_v3_model_3_seed_000 took 516.9s (30 recycles)
2024-12-08 13:58:40,236 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=70.6 pTM=0.602 ipTM=0.157
2024-12-08 13:58:56,800 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=70.1 pTM=0.606 ipTM=0.206 tol=11.2
2024-12-08 13:59:13,389 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=71.7 pTM=0.605 ipTM=0.329 tol=7.14
2024-12-08 13:59:29,969 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=69.6 pTM=0.606 ipTM=0.165 tol=4.54
2024-12-08 13:59:46,551 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=69.6 pTM=0.606 ipTM=0.191 tol=3.62
2024-12-08 14:00:03,083 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=69.5 pTM=0.607 ipTM=0.161 tol=2.39
2024-12-08 14:00:19,638 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=69.4 pTM=0.608 ipTM=0.167 tol=3.81
2024-12-08 14:00:36,207 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=70.9 pTM=0.606 ipTM=0.308 tol=4.8
2024-12-08 14:00:52,768 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=70.1 pTM=0.611 ipTM=0.174 tol=2.29
2024-12-08 14:01:09,349 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=69.3 pTM=0.606 ipTM=0.164 tol=4.27
2024-12-08 14:01:25,919 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=69.2 pTM=0.606 ipTM=0.157 tol=2.85
2024-12-08 14:01:42,476 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=70.4 pTM=0.606 ipTM=0.219 tol=3.19
2024-12-08 14:01:59,025 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=69.9 pTM=0.607 ipTM=0.161 tol=2.01
2024-12-08 14:02:15,599 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=69.3 pTM=0.609 ipTM=0.163 tol=3.41
2024-12-08 14:02:32,133 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=70.2 pTM=0.609 ipTM=0.159 tol=2.12
2024-12-08 14:02:48,708 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=69.4 pTM=0.609 ipTM=0.164 tol=1.96
2024-12-08 14:03:05,273 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=69.4 pTM=0.607 ipTM=0.158 tol=2.51
2024-12-08 14:03:21,799 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=68.9 pTM=0.607 ipTM=0.162 tol=1.59
2024-12-08 14:03:38,341 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=69.1 pTM=0.606 ipTM=0.159 tol=1.75
2024-12-08 14:03:54,894 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=69.6 pTM=0.61 ipTM=0.167 tol=2.52
2024-12-08 14:04:11,467 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=69.8 pTM=0.608 ipTM=0.161 tol=1.9
2024-12-08 14:04:27,998 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=69.3 pTM=0.606 ipTM=0.162 tol=1.69
2024-12-08 14:04:44,507 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=69.1 pTM=0.605 ipTM=0.159 tol=2.74
2024-12-08 14:05:01,041 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=69.9 pTM=0.609 ipTM=0.16 tol=2.89
2024-12-08 14:05:17,535 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=69.8 pTM=0.608 ipTM=0.161 tol=2.74
2024-12-08 14:05:34,014 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=69.7 pTM=0.609 ipTM=0.169 tol=2.5
2024-12-08 14:05:50,519 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=69.5 pTM=0.608 ipTM=0.157 tol=2.32
2024-12-08 14:06:07,057 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=69.9 pTM=0.61 ipTM=0.165 tol=2.9
2024-12-08 14:06:23,547 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=70.1 pTM=0.612 ipTM=0.164 tol=2.92
2024-12-08 14:06:40,042 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=69.6 pTM=0.608 ipTM=0.164 tol=2.91
2024-12-08 14:06:56,579 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=69.9 pTM=0.611 ipTM=0.163 tol=2.62
2024-12-08 14:06:56,580 alphafold2_multimer_v3_model_4_seed_000 took 512.9s (30 recycles)
2024-12-08 14:07:13,617 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=73.8 pTM=0.617 ipTM=0.164
2024-12-08 14:07:30,301 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=72.6 pTM=0.616 ipTM=0.137 tol=13.1
2024-12-08 14:07:46,983 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=74.3 pTM=0.619 ipTM=0.308 tol=6.38
2024-12-08 14:08:03,649 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=73.6 pTM=0.622 ipTM=0.181 tol=3.68
2024-12-08 14:08:20,329 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=73.1 pTM=0.622 ipTM=0.154 tol=2.69
2024-12-08 14:08:37,023 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=72.6 pTM=0.62 ipTM=0.148 tol=1.93
2024-12-08 14:08:53,684 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=72.8 pTM=0.621 ipTM=0.151 tol=2.48
2024-12-08 14:09:10,349 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=73 pTM=0.623 ipTM=0.151 tol=1.62
2024-12-08 14:09:27,028 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=73.1 pTM=0.623 ipTM=0.152 tol=1.23
2024-12-08 14:09:43,698 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=73.1 pTM=0.622 ipTM=0.146 tol=1.24
2024-12-08 14:10:00,362 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=73.2 pTM=0.622 ipTM=0.146 tol=1.27
2024-12-08 14:10:16,998 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=73.1 pTM=0.621 ipTM=0.145 tol=1.08
2024-12-08 14:10:33,694 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=73.2 pTM=0.622 ipTM=0.146 tol=1.56
2024-12-08 14:10:50,336 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=72.9 pTM=0.62 ipTM=0.144 tol=1.64
2024-12-08 14:11:07,020 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=73.3 pTM=0.622 ipTM=0.145 tol=2.35
2024-12-08 14:11:23,687 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=73 pTM=0.621 ipTM=0.14 tol=1.56
2024-12-08 14:11:40,351 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=73.1 pTM=0.62 ipTM=0.145 tol=0.884
2024-12-08 14:11:57,003 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=72.6 pTM=0.618 ipTM=0.137 tol=0.896
2024-12-08 14:12:13,701 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=73.1 pTM=0.619 ipTM=0.143 tol=1.63
2024-12-08 14:12:30,482 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=73.4 pTM=0.621 ipTM=0.138 tol=1.96
2024-12-08 14:12:47,158 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=73.4 pTM=0.62 ipTM=0.147 tol=1.11
2024-12-08 14:13:03,823 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=72.8 pTM=0.619 ipTM=0.142 tol=1
2024-12-08 14:13:20,584 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=72.8 pTM=0.62 ipTM=0.146 tol=1.47
2024-12-08 14:13:37,296 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=72.9 pTM=0.619 ipTM=0.133 tol=1.84
2024-12-08 14:13:53,984 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=72.9 pTM=0.62 ipTM=0.141 tol=1.03
2024-12-08 14:14:10,705 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=72.4 pTM=0.618 ipTM=0.14 tol=1.94
2024-12-08 14:14:27,379 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=72.9 pTM=0.618 ipTM=0.135 tol=2.42
2024-12-08 14:14:44,058 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=72.9 pTM=0.62 ipTM=0.14 tol=1.78
2024-12-08 14:15:00,782 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=73.1 pTM=0.622 ipTM=0.147 tol=1.16
2024-12-08 14:15:17,440 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=72.8 pTM=0.619 ipTM=0.141 tol=1.15
2024-12-08 14:15:34,101 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=72.7 pTM=0.617 ipTM=0.139 tol=2.39
2024-12-08 14:15:34,102 alphafold2_multimer_v3_model_5_seed_000 took 517.1s (30 recycles)
2024-12-08 14:15:34,558 reranking models by 'multimer' metric
2024-12-08 14:15:35,656 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 14:16:29,737 Relaxation took 55.2s
2024-12-08 14:16:29,738 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=70.7 pTM=0.607 ipTM=0.176
2024-12-08 14:17:23,270 Relaxation took 53.5s
2024-12-08 14:17:23,270 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=73.3 pTM=0.608 ipTM=0.173
2024-12-08 14:17:48,879 Relaxation took 25.6s
2024-12-08 14:17:48,879 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=71.3 pTM=0.616 ipTM=0.167
2024-12-08 14:18:56,921 Relaxation took 68.0s
2024-12-08 14:18:56,921 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=69.9 pTM=0.611 ipTM=0.163
2024-12-08 14:19:53,546 Relaxation took 56.6s
2024-12-08 14:19:53,546 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=72.7 pTM=0.617 ipTM=0.139
2024-12-08 14:19:55,074 Done