2024-12-08 14:22:18,183 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 14:22:18,499 Running on GPU
2024-12-08 14:22:20,735 Found 6 citations for tools or databases
2024-12-08 14:22:20,735 Query 1/1: SPSB2_EPHB2 (length 1318)
2024-12-08 14:22:21,013 Sleeping for 5s. Reason: PENDING
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2024-12-08 14:26:54,349 Sleeping for 10s. Reason: RUNNING
2024-12-08 14:27:04,609 Sleeping for 8s. Reason: RUNNING
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2024-12-08 14:28:01,587 Sleeping for 8s. Reason: RUNNING
2024-12-08 14:28:11,756 Sleeping for 6s. Reason: PENDING
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2024-12-08 14:28:53,301 Sleeping for 7s. Reason: RUNNING
2024-12-08 14:29:00,566 Sleeping for 10s. Reason: RUNNING
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2024-12-08 14:29:30,341 Sleeping for 9s. Reason: RUNNING
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2024-12-08 14:31:39,482 Sleeping for 9s. Reason: RUNNING
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2024-12-08 14:32:04,280 Sleeping for 10s. Reason: RUNNING
2024-12-08 14:32:14,544 Sleeping for 5s. Reason: RUNNING
2024-12-08 14:32:19,805 Sleeping for 10s. Reason: RUNNING
2024-12-08 14:32:30,070 Sleeping for 8s. Reason: RUNNING
2024-12-08 14:32:38,325 Sleeping for 8s. Reason: RUNNING
2024-12-08 14:32:46,583 Sleeping for 9s. Reason: RUNNING
2024-12-08 14:32:55,847 Sleeping for 6s. Reason: RUNNING
2024-12-08 14:33:02,110 Sleeping for 9s. Reason: RUNNING
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2024-12-08 14:33:16,627 Sleeping for 6s. Reason: RUNNING
2024-12-08 14:33:28,479 Setting max_seq=508, max_extra_seq=2048
2024-12-08 14:36:41,694 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=73.5 pTM=0.348 ipTM=0.186
2024-12-08 14:37:27,073 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=73.1 pTM=0.342 ipTM=0.162 tol=15.4
2024-12-08 14:38:12,643 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=73.3 pTM=0.345 ipTM=0.169 tol=7.75
2024-12-08 14:38:58,388 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=73.4 pTM=0.344 ipTM=0.167 tol=7.45
2024-12-08 14:39:44,123 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=73.2 pTM=0.341 ipTM=0.164 tol=5.7
2024-12-08 14:40:29,814 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=73.1 pTM=0.339 ipTM=0.164 tol=3.92
2024-12-08 14:41:15,512 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=73.1 pTM=0.342 ipTM=0.245 tol=7.58
2024-12-08 14:42:01,223 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=73.5 pTM=0.342 ipTM=0.196 tol=7.89
2024-12-08 14:42:46,904 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=73.3 pTM=0.341 ipTM=0.173 tol=4.8
2024-12-08 14:43:32,616 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=73.2 pTM=0.341 ipTM=0.161 tol=3.56
2024-12-08 14:44:18,349 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=73.1 pTM=0.345 ipTM=0.169 tol=2.51
2024-12-08 14:45:04,066 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=73.2 pTM=0.345 ipTM=0.175 tol=6.48
2024-12-08 14:45:49,791 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=73.3 pTM=0.344 ipTM=0.174 tol=3.71
2024-12-08 14:46:35,544 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=73.5 pTM=0.34 ipTM=0.17 tol=2.76
2024-12-08 14:47:21,304 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=73.3 pTM=0.341 ipTM=0.17 tol=3.36
2024-12-08 14:48:07,074 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=73.4 pTM=0.339 ipTM=0.163 tol=4.89
2024-12-08 14:48:52,810 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=73.1 pTM=0.34 ipTM=0.166 tol=3.61
2024-12-08 14:49:38,545 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=73.2 pTM=0.34 ipTM=0.16 tol=4.77
2024-12-08 14:50:24,273 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=73.3 pTM=0.341 ipTM=0.178 tol=6
2024-12-08 14:51:09,984 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=73.8 pTM=0.339 ipTM=0.185 tol=3.99
2024-12-08 14:51:55,696 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=73.6 pTM=0.343 ipTM=0.178 tol=3.22
2024-12-08 14:52:41,425 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=73.8 pTM=0.34 ipTM=0.193 tol=2.54
2024-12-08 14:53:27,132 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=74 pTM=0.356 ipTM=0.324 tol=2.78
2024-12-08 14:54:12,914 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=74.2 pTM=0.361 ipTM=0.372 tol=3.4
2024-12-08 14:54:58,723 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=74.1 pTM=0.36 ipTM=0.364 tol=2.18
2024-12-08 14:55:44,541 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=74.3 pTM=0.353 ipTM=0.278 tol=2.33
2024-12-08 14:56:30,336 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=73.8 pTM=0.346 ipTM=0.224 tol=3.74
2024-12-08 14:57:16,118 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=73.6 pTM=0.343 ipTM=0.204 tol=2.78
2024-12-08 14:58:01,850 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=73.2 pTM=0.341 ipTM=0.184 tol=2.82
2024-12-08 14:58:47,561 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=73.4 pTM=0.342 ipTM=0.181 tol=2.92
2024-12-08 14:59:33,252 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=73.4 pTM=0.341 ipTM=0.183 tol=1.4
2024-12-08 14:59:33,253 alphafold2_multimer_v3_model_1_seed_000 took 1559.8s (30 recycles)
2024-12-08 15:00:20,055 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=72.6 pTM=0.342 ipTM=0.164
2024-12-08 15:01:05,918 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=72.8 pTM=0.343 ipTM=0.162 tol=28.1
2024-12-08 15:01:51,758 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=73 pTM=0.353 ipTM=0.164 tol=10.7
2024-12-08 15:02:37,667 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=73.6 pTM=0.352 ipTM=0.162 tol=6.95
2024-12-08 15:03:23,567 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=73.9 pTM=0.353 ipTM=0.162 tol=6.84
2024-12-08 15:04:09,414 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=73.8 pTM=0.352 ipTM=0.162 tol=3.96
2024-12-08 15:04:55,262 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=73.9 pTM=0.352 ipTM=0.162 tol=4.38
2024-12-08 15:05:41,079 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=74.1 pTM=0.352 ipTM=0.163 tol=5.64
2024-12-08 15:06:26,940 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=74.1 pTM=0.354 ipTM=0.162 tol=4.87
2024-12-08 15:07:12,790 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=74.2 pTM=0.351 ipTM=0.163 tol=6.26
2024-12-08 15:07:58,647 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=74.2 pTM=0.353 ipTM=0.161 tol=5.5
2024-12-08 15:08:44,526 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=74 pTM=0.347 ipTM=0.161 tol=9.09
2024-12-08 15:09:30,387 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=74 pTM=0.349 ipTM=0.161 tol=1.97
2024-12-08 15:10:16,285 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=74.1 pTM=0.348 ipTM=0.161 tol=3.56
2024-12-08 15:11:02,140 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=74.1 pTM=0.347 ipTM=0.162 tol=2.75
2024-12-08 15:11:48,024 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=74.2 pTM=0.349 ipTM=0.164 tol=3.26
2024-12-08 15:12:33,952 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=74.1 pTM=0.349 ipTM=0.164 tol=2.06
2024-12-08 15:13:19,812 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=74.2 pTM=0.349 ipTM=0.166 tol=1.79
2024-12-08 15:14:05,704 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=74 pTM=0.349 ipTM=0.166 tol=1.03
2024-12-08 15:14:51,575 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=74.1 pTM=0.347 ipTM=0.164 tol=1.63
2024-12-08 15:15:37,446 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=73.9 pTM=0.35 ipTM=0.163 tol=3.05
2024-12-08 15:16:23,353 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=74.1 pTM=0.348 ipTM=0.162 tol=1.56
2024-12-08 15:17:09,236 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=74 pTM=0.348 ipTM=0.161 tol=3.43
2024-12-08 15:17:55,134 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=74.1 pTM=0.349 ipTM=0.161 tol=3.03
2024-12-08 15:18:41,000 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=73.8 pTM=0.35 ipTM=0.161 tol=2.13
2024-12-08 15:19:26,868 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=73.9 pTM=0.352 ipTM=0.16 tol=4.38
2024-12-08 15:20:12,748 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=73.8 pTM=0.349 ipTM=0.162 tol=3.64
2024-12-08 15:20:58,597 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=73.9 pTM=0.35 ipTM=0.16 tol=2.15
2024-12-08 15:21:44,461 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=73.7 pTM=0.349 ipTM=0.162 tol=2.71
2024-12-08 15:22:30,311 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=73.9 pTM=0.353 ipTM=0.163 tol=3.79
2024-12-08 15:23:16,149 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=73.8 pTM=0.348 ipTM=0.162 tol=5.14
2024-12-08 15:23:16,150 alphafold2_multimer_v3_model_2_seed_000 took 1421.8s (30 recycles)
2024-12-08 15:24:03,062 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=72.4 pTM=0.374 ipTM=0.338
2024-12-08 15:24:48,947 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=73.3 pTM=0.345 ipTM=0.159 tol=8.5
2024-12-08 15:25:34,830 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=73.1 pTM=0.347 ipTM=0.183 tol=12.9
2024-12-08 15:26:20,696 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=73 pTM=0.343 ipTM=0.207 tol=4.14
2024-12-08 15:27:06,576 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=73.2 pTM=0.346 ipTM=0.169 tol=4.69
2024-12-08 15:27:52,463 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=73.1 pTM=0.347 ipTM=0.179 tol=4.11
2024-12-08 15:28:38,312 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=73.2 pTM=0.346 ipTM=0.175 tol=4.45
2024-12-08 15:29:24,160 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=73.2 pTM=0.349 ipTM=0.187 tol=2.63
2024-12-08 15:30:10,024 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=73.4 pTM=0.35 ipTM=0.169 tol=2.03
2024-12-08 15:30:55,942 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=73.4 pTM=0.347 ipTM=0.156 tol=8.3
2024-12-08 15:31:41,829 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=73.2 pTM=0.349 ipTM=0.169 tol=7.85
2024-12-08 15:32:27,710 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=73.1 pTM=0.347 ipTM=0.173 tol=3.33
2024-12-08 15:33:13,584 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=73.3 pTM=0.348 ipTM=0.178 tol=4.52
2024-12-08 15:33:59,476 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=73.2 pTM=0.349 ipTM=0.177 tol=2.09
2024-12-08 15:34:45,324 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=73.4 pTM=0.347 ipTM=0.179 tol=2.4
2024-12-08 15:35:31,226 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=73.1 pTM=0.346 ipTM=0.154 tol=9.49
2024-12-08 15:36:17,095 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=73.2 pTM=0.349 ipTM=0.166 tol=8.62
2024-12-08 15:37:03,028 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=73.2 pTM=0.345 ipTM=0.156 tol=9.37
2024-12-08 15:37:48,890 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=73.1 pTM=0.351 ipTM=0.167 tol=9.07
2024-12-08 15:38:34,801 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=73.1 pTM=0.346 ipTM=0.153 tol=5.66
2024-12-08 15:39:20,641 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=73.1 pTM=0.349 ipTM=0.168 tol=7.17
2024-12-08 15:40:06,554 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=72.9 pTM=0.347 ipTM=0.154 tol=5.16
2024-12-08 15:40:52,372 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=73.3 pTM=0.35 ipTM=0.181 tol=4.98
2024-12-08 15:41:38,204 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=73.2 pTM=0.35 ipTM=0.198 tol=1.91
2024-12-08 15:42:24,031 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=73.1 pTM=0.348 ipTM=0.172 tol=2.89
2024-12-08 15:43:09,886 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=73.3 pTM=0.351 ipTM=0.177 tol=2.35
2024-12-08 15:43:55,694 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=73.3 pTM=0.349 ipTM=0.164 tol=2.55
2024-12-08 15:44:41,574 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=73.2 pTM=0.349 ipTM=0.155 tol=5.86
2024-12-08 15:45:27,406 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=73.3 pTM=0.349 ipTM=0.168 tol=5.65
2024-12-08 15:46:13,232 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=73.2 pTM=0.349 ipTM=0.172 tol=1.54
2024-12-08 15:46:59,089 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=73.3 pTM=0.347 ipTM=0.164 tol=1.66
2024-12-08 15:46:59,090 alphafold2_multimer_v3_model_3_seed_000 took 1421.9s (30 recycles)
2024-12-08 15:47:46,060 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=70.8 pTM=0.343 ipTM=0.176
2024-12-08 15:48:31,937 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=71.3 pTM=0.336 ipTM=0.175 tol=10.4
2024-12-08 15:49:17,754 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=71.3 pTM=0.336 ipTM=0.166 tol=12.2
2024-12-08 15:50:03,621 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=71.2 pTM=0.338 ipTM=0.165 tol=4.78
2024-12-08 15:50:49,450 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=71.4 pTM=0.344 ipTM=0.162 tol=4.85
2024-12-08 15:51:35,286 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=71.3 pTM=0.344 ipTM=0.176 tol=6.14
2024-12-08 15:52:21,135 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=71.4 pTM=0.348 ipTM=0.167 tol=5.12
2024-12-08 15:53:06,991 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=71.4 pTM=0.347 ipTM=0.168 tol=4.59
2024-12-08 15:53:52,794 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=71.8 pTM=0.35 ipTM=0.176 tol=6.31
2024-12-08 15:54:38,585 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=71.5 pTM=0.346 ipTM=0.172 tol=5.51
2024-12-08 15:55:24,379 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=71.6 pTM=0.348 ipTM=0.185 tol=5.19
2024-12-08 15:56:10,148 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=71.9 pTM=0.35 ipTM=0.18 tol=4.54
2024-12-08 15:56:55,923 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=71.6 pTM=0.349 ipTM=0.186 tol=3.66
2024-12-08 15:57:41,680 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=71.7 pTM=0.349 ipTM=0.181 tol=4.94
2024-12-08 15:58:27,430 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=71.3 pTM=0.345 ipTM=0.19 tol=4.88
2024-12-08 15:59:13,218 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=71.7 pTM=0.349 ipTM=0.19 tol=4.04
2024-12-08 15:59:58,955 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=71.6 pTM=0.349 ipTM=0.182 tol=5.4
2024-12-08 16:00:44,697 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=71.3 pTM=0.351 ipTM=0.187 tol=5.32
2024-12-08 16:01:30,467 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=72.1 pTM=0.379 ipTM=0.19 tol=7.84
2024-12-08 16:02:16,214 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=71.6 pTM=0.379 ipTM=0.188 tol=5.15
2024-12-08 16:03:02,026 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=72.1 pTM=0.385 ipTM=0.179 tol=6.97
2024-12-08 16:03:47,789 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=71.5 pTM=0.39 ipTM=0.183 tol=3.72
2024-12-08 16:04:33,566 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=71.6 pTM=0.373 ipTM=0.181 tol=3.43
2024-12-08 16:05:19,365 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=71.5 pTM=0.375 ipTM=0.194 tol=3.35
2024-12-08 16:06:05,144 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=71.6 pTM=0.374 ipTM=0.183 tol=4.14
2024-12-08 16:06:50,909 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=71.8 pTM=0.386 ipTM=0.187 tol=3.59
2024-12-08 16:07:36,687 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=71.6 pTM=0.37 ipTM=0.188 tol=4.68
2024-12-08 16:08:22,430 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=71.5 pTM=0.376 ipTM=0.191 tol=3.7
2024-12-08 16:09:08,190 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=71.9 pTM=0.371 ipTM=0.192 tol=5.31
2024-12-08 16:09:53,925 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=71.7 pTM=0.379 ipTM=0.202 tol=4.6
2024-12-08 16:10:39,705 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=71.6 pTM=0.367 ipTM=0.193 tol=4.53
2024-12-08 16:10:39,706 alphafold2_multimer_v3_model_4_seed_000 took 1419.6s (30 recycles)
2024-12-08 16:11:26,683 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=71.1 pTM=0.343 ipTM=0.166
2024-12-08 16:12:12,586 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=72.8 pTM=0.34 ipTM=0.173 tol=8.3
2024-12-08 16:12:58,512 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=73 pTM=0.342 ipTM=0.152 tol=7.16
2024-12-08 16:13:44,335 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=72.9 pTM=0.349 ipTM=0.169 tol=8.29
2024-12-08 16:14:30,177 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=73 pTM=0.347 ipTM=0.159 tol=8.49
2024-12-08 16:15:16,043 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=73.1 pTM=0.35 ipTM=0.166 tol=6.08
2024-12-08 16:16:01,900 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=73.1 pTM=0.349 ipTM=0.168 tol=9.05
2024-12-08 16:16:47,685 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=73.6 pTM=0.398 ipTM=0.475 tol=5.18
2024-12-08 16:17:33,465 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=74.6 pTM=0.425 ipTM=0.605 tol=5.63
2024-12-08 16:18:19,242 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=74.7 pTM=0.423 ipTM=0.597 tol=4.32
2024-12-08 16:19:05,002 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=74.8 pTM=0.427 ipTM=0.616 tol=4.46
2024-12-08 16:19:50,783 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=74.6 pTM=0.425 ipTM=0.599 tol=2.59
2024-12-08 16:20:36,548 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=74.8 pTM=0.43 ipTM=0.634 tol=2.94
2024-12-08 16:21:22,270 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=74.7 pTM=0.425 ipTM=0.604 tol=2.84
2024-12-08 16:22:07,981 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=74.6 pTM=0.428 ipTM=0.62 tol=3.45
2024-12-08 16:22:53,732 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=74.7 pTM=0.428 ipTM=0.612 tol=2.67
2024-12-08 16:23:39,473 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=74.4 pTM=0.422 ipTM=0.594 tol=3.12
2024-12-08 16:24:25,277 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=74.7 pTM=0.426 ipTM=0.607 tol=4.54
2024-12-08 16:25:11,044 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=74.2 pTM=0.418 ipTM=0.563 tol=4.62
2024-12-08 16:25:56,823 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=74.2 pTM=0.419 ipTM=0.573 tol=4.61
2024-12-08 16:26:42,605 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=74.3 pTM=0.411 ipTM=0.535 tol=6.7
2024-12-08 16:27:28,365 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=74.5 pTM=0.423 ipTM=0.598 tol=3.45
2024-12-08 16:28:14,138 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=74.7 pTM=0.422 ipTM=0.591 tol=2.04
2024-12-08 16:28:59,886 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=74.6 pTM=0.424 ipTM=0.603 tol=2.38
2024-12-08 16:29:45,611 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=74.5 pTM=0.42 ipTM=0.583 tol=1.54
2024-12-08 16:30:31,357 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=74.4 pTM=0.418 ipTM=0.576 tol=2.29
2024-12-08 16:31:17,137 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=74.5 pTM=0.424 ipTM=0.602 tol=1.66
2024-12-08 16:32:02,883 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=74.4 pTM=0.417 ipTM=0.571 tol=1.8
2024-12-08 16:32:48,610 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=74.5 pTM=0.423 ipTM=0.598 tol=1.58
2024-12-08 16:33:34,350 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=74.4 pTM=0.417 ipTM=0.565 tol=1.94
2024-12-08 16:34:20,115 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=74.2 pTM=0.415 ipTM=0.56 tol=2.72
2024-12-08 16:34:20,116 alphafold2_multimer_v3_model_5_seed_000 took 1419.4s (30 recycles)
2024-12-08 16:34:21,159 reranking models by 'multimer' metric
2024-12-08 16:34:24,438 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 16:36:24,668 Relaxation took 123.5s
2024-12-08 16:36:24,668 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=74.2 pTM=0.415 ipTM=0.56
2024-12-08 16:38:17,898 Relaxation took 113.2s
2024-12-08 16:38:17,898 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=71.6 pTM=0.367 ipTM=0.193
2024-12-08 16:39:57,878 Relaxation took 100.0s
2024-12-08 16:39:57,879 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=73.4 pTM=0.341 ipTM=0.183
2024-12-08 16:41:23,969 Relaxation took 86.1s
2024-12-08 16:41:23,969 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=73.3 pTM=0.347 ipTM=0.164
2024-12-08 16:42:57,580 Relaxation took 93.6s
2024-12-08 16:42:57,580 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=73.8 pTM=0.348 ipTM=0.162
2024-12-08 16:43:00,263 Done