2024-12-08 14:38:05,337 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 14:38:05,642 Running on GPU
2024-12-08 14:38:06,418 Found 6 citations for tools or databases
2024-12-08 14:38:06,418 Query 1/1: SPSB4_DSG2 (length 1391)
2024-12-08 14:38:06,690 Sleeping for 10s. Reason: PENDING
2024-12-08 14:38:16,951 Sleeping for 6s. Reason: PENDING
2024-12-08 14:38:23,201 Sleeping for 5s. Reason: PENDING
2024-12-08 14:38:28,459 Sleeping for 10s. Reason: PENDING
2024-12-08 14:38:38,722 Sleeping for 8s. Reason: PENDING
2024-12-08 14:38:46,986 Sleeping for 7s. Reason: PENDING
2024-12-08 14:38:54,242 Sleeping for 5s. Reason: PENDING
2024-12-08 14:38:59,502 Sleeping for 8s. Reason: PENDING
2024-12-08 14:39:07,758 Sleeping for 5s. Reason: PENDING
2024-12-08 14:39:13,162 Sleeping for 8s. Reason: PENDING
2024-12-08 14:39:21,426 Sleeping for 6s. Reason: PENDING
2024-12-08 14:39:27,690 Sleeping for 7s. Reason: PENDING
2024-12-08 14:39:34,943 Sleeping for 6s. Reason: PENDING
2024-12-08 14:39:41,200 Sleeping for 9s. Reason: PENDING
2024-12-08 14:39:50,473 Sleeping for 5s. Reason: PENDING
2024-12-08 14:39:55,726 Sleeping for 9s. Reason: PENDING
2024-12-08 14:40:04,989 Sleeping for 6s. Reason: RUNNING
2024-12-08 14:40:11,249 Sleeping for 8s. Reason: RUNNING
2024-12-08 14:40:19,510 Sleeping for 7s. Reason: RUNNING
2024-12-08 14:40:26,766 Sleeping for 8s. Reason: RUNNING
2024-12-08 14:40:35,027 Sleeping for 8s. Reason: RUNNING
2024-12-08 14:40:43,288 Sleeping for 8s. Reason: RUNNING
2024-12-08 14:40:51,553 Sleeping for 10s. Reason: RUNNING
2024-12-08 14:41:01,814 Sleeping for 9s. Reason: RUNNING
2024-12-08 14:41:11,089 Sleeping for 6s. Reason: RUNNING
2024-12-08 14:41:17,351 Sleeping for 10s. Reason: RUNNING
2024-12-08 14:41:27,616 Sleeping for 5s. Reason: RUNNING
2024-12-08 14:41:32,878 Sleeping for 5s. Reason: RUNNING
2024-12-08 14:41:38,128 Sleeping for 6s. Reason: RUNNING
2024-12-08 14:41:44,385 Sleeping for 10s. Reason: RUNNING
2024-12-08 14:41:54,642 Sleeping for 8s. Reason: RUNNING
2024-12-08 14:42:02,904 Sleeping for 10s. Reason: RUNNING
2024-12-08 14:42:13,163 Sleeping for 10s. Reason: RUNNING
2024-12-08 14:42:23,423 Sleeping for 5s. Reason: RUNNING
2024-12-08 14:42:28,681 Sleeping for 6s. Reason: RUNNING
2024-12-08 14:42:34,941 Sleeping for 10s. Reason: RUNNING
2024-12-08 14:42:45,211 Sleeping for 10s. Reason: RUNNING
2024-12-08 14:42:55,476 Sleeping for 6s. Reason: RUNNING
2024-12-08 14:43:01,731 Sleeping for 8s. Reason: RUNNING
2024-12-08 14:43:09,999 Sleeping for 5s. Reason: RUNNING
2024-12-08 14:43:15,258 Sleeping for 10s. Reason: RUNNING
2024-12-08 14:43:25,516 Sleeping for 6s. Reason: RUNNING
2024-12-08 14:43:31,776 Sleeping for 6s. Reason: RUNNING
2024-12-08 14:43:38,030 Sleeping for 6s. Reason: RUNNING
2024-12-08 14:43:44,287 Sleeping for 7s. Reason: RUNNING
2024-12-08 14:43:51,540 Sleeping for 10s. Reason: RUNNING
2024-12-08 14:44:01,798 Sleeping for 5s. Reason: RUNNING
2024-12-08 14:44:07,053 Sleeping for 10s. Reason: RUNNING
2024-12-08 14:44:17,320 Sleeping for 6s. Reason: RUNNING
2024-12-08 14:44:23,583 Sleeping for 6s. Reason: RUNNING
2024-12-08 14:44:29,843 Sleeping for 6s. Reason: RUNNING
2024-12-08 14:44:37,553 Sleeping for 6s. Reason: PENDING
2024-12-08 14:44:43,805 Sleeping for 9s. Reason: RUNNING
2024-12-08 14:44:53,068 Sleeping for 7s. Reason: RUNNING
2024-12-08 14:45:00,325 Sleeping for 5s. Reason: RUNNING
2024-12-08 14:45:05,585 Sleeping for 10s. Reason: RUNNING
2024-12-08 14:45:15,848 Sleeping for 7s. Reason: RUNNING
2024-12-08 14:45:23,116 Sleeping for 8s. Reason: RUNNING
2024-12-08 14:45:31,371 Sleeping for 10s. Reason: RUNNING
2024-12-08 14:45:41,631 Sleeping for 5s. Reason: RUNNING
2024-12-08 14:45:46,889 Sleeping for 8s. Reason: RUNNING
2024-12-08 14:45:55,141 Sleeping for 5s. Reason: RUNNING
2024-12-08 14:46:00,392 Sleeping for 10s. Reason: RUNNING
2024-12-08 14:46:10,643 Sleeping for 7s. Reason: RUNNING
2024-12-08 14:46:17,902 Sleeping for 8s. Reason: RUNNING
2024-12-08 14:46:26,167 Sleeping for 8s. Reason: RUNNING
2024-12-08 14:46:34,422 Sleeping for 8s. Reason: RUNNING
2024-12-08 14:46:42,691 Sleeping for 6s. Reason: RUNNING
2024-12-08 14:46:48,940 Sleeping for 9s. Reason: RUNNING
2024-12-08 14:47:01,262 Setting max_seq=508, max_extra_seq=2048
2024-12-08 14:50:31,244 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=57.5 pTM=0.34 ipTM=0.176
2024-12-08 14:51:24,153 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=57.2 pTM=0.35 ipTM=0.194 tol=13.4
2024-12-08 14:52:17,244 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=57.1 pTM=0.347 ipTM=0.197 tol=8.59
2024-12-08 14:53:10,463 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=57 pTM=0.348 ipTM=0.199 tol=10.5
2024-12-08 14:54:03,713 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=57 pTM=0.348 ipTM=0.194 tol=8.09
2024-12-08 14:54:56,997 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=56.9 pTM=0.344 ipTM=0.208 tol=8.96
2024-12-08 14:55:50,274 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=56.8 pTM=0.344 ipTM=0.212 tol=6.61
2024-12-08 14:56:43,560 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=56.9 pTM=0.344 ipTM=0.211 tol=11.1
2024-12-08 14:57:36,863 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=57.1 pTM=0.346 ipTM=0.212 tol=9.93
2024-12-08 14:58:30,173 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=56.9 pTM=0.345 ipTM=0.215 tol=13.5
2024-12-08 14:59:23,506 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=57 pTM=0.345 ipTM=0.209 tol=11.4
2024-12-08 15:00:16,843 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=57 pTM=0.35 ipTM=0.209 tol=6.7
2024-12-08 15:01:10,133 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=57 pTM=0.349 ipTM=0.209 tol=11.3
2024-12-08 15:02:03,418 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=56.8 pTM=0.343 ipTM=0.212 tol=10.5
2024-12-08 15:02:56,709 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=57.2 pTM=0.347 ipTM=0.208 tol=4.12
2024-12-08 15:03:50,014 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=57.2 pTM=0.347 ipTM=0.206 tol=6
2024-12-08 15:04:43,341 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=57 pTM=0.346 ipTM=0.208 tol=10.4
2024-12-08 15:05:36,685 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=57.1 pTM=0.347 ipTM=0.208 tol=7.83
2024-12-08 15:06:30,041 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=56.9 pTM=0.342 ipTM=0.212 tol=6.17
2024-12-08 15:07:23,377 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=57.1 pTM=0.345 ipTM=0.213 tol=7.5
2024-12-08 15:08:16,710 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=57.3 pTM=0.347 ipTM=0.207 tol=8.52
2024-12-08 15:09:10,077 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=57.1 pTM=0.347 ipTM=0.197 tol=7.01
2024-12-08 15:10:03,418 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=57 pTM=0.343 ipTM=0.208 tol=7.27
2024-12-08 15:10:56,769 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=57.3 pTM=0.347 ipTM=0.208 tol=2.88
2024-12-08 15:11:50,116 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=57.2 pTM=0.348 ipTM=0.211 tol=2.62
2024-12-08 15:12:43,430 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=56.9 pTM=0.347 ipTM=0.214 tol=11.6
2024-12-08 15:13:36,778 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=56.8 pTM=0.347 ipTM=0.218 tol=6.92
2024-12-08 15:14:30,163 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=57 pTM=0.345 ipTM=0.221 tol=8.91
2024-12-08 15:15:23,561 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=56.9 pTM=0.343 ipTM=0.214 tol=6.51
2024-12-08 15:16:16,931 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=57.2 pTM=0.346 ipTM=0.21 tol=6.94
2024-12-08 15:17:10,282 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=57.1 pTM=0.347 ipTM=0.208 tol=3.46
2024-12-08 15:17:10,283 alphafold2_multimer_v3_model_1_seed_000 took 1805.5s (30 recycles)
2024-12-08 15:18:04,731 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=56 pTM=0.361 ipTM=0.193
2024-12-08 15:18:58,044 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=56.7 pTM=0.372 ipTM=0.199 tol=15
2024-12-08 15:19:51,366 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=57 pTM=0.369 ipTM=0.203 tol=11.1
2024-12-08 15:20:44,712 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=57.2 pTM=0.375 ipTM=0.225 tol=13.3
2024-12-08 15:21:38,062 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=57.2 pTM=0.373 ipTM=0.222 tol=12.4
2024-12-08 15:22:31,392 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=57.2 pTM=0.369 ipTM=0.223 tol=9.79
2024-12-08 15:23:24,806 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=57.1 pTM=0.366 ipTM=0.213 tol=7.7
2024-12-08 15:24:18,142 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=57.4 pTM=0.37 ipTM=0.209 tol=6.97
2024-12-08 15:25:11,480 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=57.3 pTM=0.366 ipTM=0.203 tol=3.68
2024-12-08 15:26:04,804 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=57.3 pTM=0.366 ipTM=0.206 tol=7.33
2024-12-08 15:26:58,130 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=57.3 pTM=0.367 ipTM=0.205 tol=4.38
2024-12-08 15:27:51,427 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=57.5 pTM=0.369 ipTM=0.201 tol=8.05
2024-12-08 15:28:44,706 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=57.5 pTM=0.369 ipTM=0.198 tol=6.59
2024-12-08 15:29:38,012 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=57.2 pTM=0.366 ipTM=0.207 tol=6.23
2024-12-08 15:30:31,415 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=57.3 pTM=0.368 ipTM=0.205 tol=8.95
2024-12-08 15:31:24,800 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=57.2 pTM=0.367 ipTM=0.204 tol=7.2
2024-12-08 15:32:18,230 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=57.2 pTM=0.365 ipTM=0.204 tol=6.09
2024-12-08 15:33:11,638 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=57.5 pTM=0.371 ipTM=0.205 tol=3.68
2024-12-08 15:34:05,018 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=57.2 pTM=0.368 ipTM=0.199 tol=7.07
2024-12-08 15:34:58,353 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=57.4 pTM=0.369 ipTM=0.199 tol=5.16
2024-12-08 15:35:51,743 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=57.4 pTM=0.371 ipTM=0.211 tol=6.55
2024-12-08 15:36:45,083 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=57.3 pTM=0.368 ipTM=0.204 tol=6.2
2024-12-08 15:37:38,389 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=57.3 pTM=0.366 ipTM=0.199 tol=9.88
2024-12-08 15:38:31,739 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=57.3 pTM=0.367 ipTM=0.197 tol=4.58
2024-12-08 15:39:25,138 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=57.2 pTM=0.367 ipTM=0.205 tol=6.67
2024-12-08 15:40:18,570 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=57.2 pTM=0.367 ipTM=0.204 tol=5.88
2024-12-08 15:41:11,963 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=57.5 pTM=0.373 ipTM=0.203 tol=8.27
2024-12-08 15:42:05,352 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=57.5 pTM=0.369 ipTM=0.199 tol=3.88
2024-12-08 15:42:58,720 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=57.2 pTM=0.367 ipTM=0.209 tol=6.36
2024-12-08 15:43:52,113 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=57.4 pTM=0.372 ipTM=0.212 tol=5.07
2024-12-08 15:44:45,492 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=57.5 pTM=0.372 ipTM=0.218 tol=3.69
2024-12-08 15:44:45,493 alphafold2_multimer_v3_model_2_seed_000 took 1654.0s (30 recycles)
2024-12-08 15:45:40,092 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=55.8 pTM=0.349 ipTM=0.174
2024-12-08 15:46:33,512 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=56.4 pTM=0.361 ipTM=0.168 tol=18.6
2024-12-08 15:47:26,882 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=56.5 pTM=0.359 ipTM=0.176 tol=9.2
2024-12-08 15:48:20,273 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=56.5 pTM=0.358 ipTM=0.173 tol=8.02
2024-12-08 15:49:13,685 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=56.4 pTM=0.359 ipTM=0.166 tol=9.17
2024-12-08 15:50:07,095 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=56.5 pTM=0.356 ipTM=0.166 tol=8.38
2024-12-08 15:51:00,512 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=56.5 pTM=0.356 ipTM=0.256 tol=10.2
2024-12-08 15:51:53,926 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=56.7 pTM=0.359 ipTM=0.366 tol=10.5
2024-12-08 15:52:47,375 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=56.7 pTM=0.36 ipTM=0.463 tol=10.1
2024-12-08 15:53:40,776 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=56.6 pTM=0.36 ipTM=0.485 tol=11.2
2024-12-08 15:54:34,203 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=56.8 pTM=0.359 ipTM=0.459 tol=8.9
2024-12-08 15:55:27,578 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=56.7 pTM=0.364 ipTM=0.463 tol=8.97
2024-12-08 15:56:21,004 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=56.8 pTM=0.361 ipTM=0.423 tol=8.54
2024-12-08 15:57:14,385 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=56.5 pTM=0.362 ipTM=0.432 tol=9.2
2024-12-08 15:58:07,794 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=56.7 pTM=0.361 ipTM=0.436 tol=8.56
2024-12-08 15:59:01,172 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=56.5 pTM=0.363 ipTM=0.399 tol=7.17
2024-12-08 15:59:54,613 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=56.7 pTM=0.362 ipTM=0.417 tol=5.66
2024-12-08 16:00:48,019 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=56.8 pTM=0.367 ipTM=0.47 tol=7.55
2024-12-08 16:01:41,461 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=56.9 pTM=0.361 ipTM=0.481 tol=7.34
2024-12-08 16:02:34,893 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=56.8 pTM=0.361 ipTM=0.482 tol=7.62
2024-12-08 16:03:28,313 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=56.8 pTM=0.362 ipTM=0.499 tol=12.6
2024-12-08 16:04:21,700 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=56.8 pTM=0.366 ipTM=0.509 tol=8.29
2024-12-08 16:05:15,090 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=56.8 pTM=0.361 ipTM=0.477 tol=6.47
2024-12-08 16:06:08,510 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=56.8 pTM=0.361 ipTM=0.494 tol=5.88
2024-12-08 16:07:01,977 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=56.9 pTM=0.361 ipTM=0.497 tol=5.32
2024-12-08 16:07:55,426 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=56.8 pTM=0.361 ipTM=0.492 tol=6.33
2024-12-08 16:08:48,859 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=56.9 pTM=0.358 ipTM=0.494 tol=5.04
2024-12-08 16:09:42,269 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=56.9 pTM=0.36 ipTM=0.471 tol=5.52
2024-12-08 16:10:35,702 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=56.8 pTM=0.359 ipTM=0.482 tol=5.92
2024-12-08 16:11:29,128 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=56.8 pTM=0.361 ipTM=0.48 tol=4.44
2024-12-08 16:12:22,598 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=56.9 pTM=0.363 ipTM=0.488 tol=5.93
2024-12-08 16:12:22,599 alphafold2_multimer_v3_model_3_seed_000 took 1655.9s (30 recycles)
2024-12-08 16:13:17,236 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=54.7 pTM=0.355 ipTM=0.17
2024-12-08 16:14:10,704 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=55.4 pTM=0.365 ipTM=0.195 tol=23.9
2024-12-08 16:15:04,177 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=55.4 pTM=0.359 ipTM=0.206 tol=8.72
2024-12-08 16:15:57,651 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=55.5 pTM=0.365 ipTM=0.219 tol=8.65
2024-12-08 16:16:51,132 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=55.6 pTM=0.363 ipTM=0.223 tol=5.39
2024-12-08 16:17:44,591 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=55.5 pTM=0.363 ipTM=0.229 tol=6.73
2024-12-08 16:18:37,965 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=55.6 pTM=0.365 ipTM=0.237 tol=4.11
2024-12-08 16:19:31,330 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=55.6 pTM=0.365 ipTM=0.243 tol=3.44
2024-12-08 16:20:24,706 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=55.6 pTM=0.366 ipTM=0.244 tol=3.06
2024-12-08 16:21:18,077 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=55.7 pTM=0.365 ipTM=0.238 tol=2.87
2024-12-08 16:22:11,488 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=55.7 pTM=0.365 ipTM=0.24 tol=5.7
2024-12-08 16:23:04,930 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=55.6 pTM=0.366 ipTM=0.237 tol=6.91
2024-12-08 16:23:58,354 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=55.6 pTM=0.368 ipTM=0.236 tol=4.44
2024-12-08 16:24:51,778 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=55.4 pTM=0.365 ipTM=0.24 tol=6.25
2024-12-08 16:25:45,179 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=55.7 pTM=0.367 ipTM=0.231 tol=5.54
2024-12-08 16:26:38,611 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=55.4 pTM=0.363 ipTM=0.233 tol=8.29
2024-12-08 16:27:32,005 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=55.7 pTM=0.367 ipTM=0.239 tol=5.14
2024-12-08 16:28:25,395 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=56 pTM=0.371 ipTM=0.242 tol=2.83
2024-12-08 16:29:18,819 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=55.6 pTM=0.366 ipTM=0.242 tol=2.95
2024-12-08 16:30:12,250 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=55.7 pTM=0.369 ipTM=0.245 tol=3.45
2024-12-08 16:31:05,665 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=55.8 pTM=0.369 ipTM=0.241 tol=2.75
2024-12-08 16:31:59,038 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=56 pTM=0.369 ipTM=0.238 tol=2.5
2024-12-08 16:32:52,387 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=55.6 pTM=0.366 ipTM=0.244 tol=2.85
2024-12-08 16:33:45,709 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=55.7 pTM=0.369 ipTM=0.246 tol=2.77
2024-12-08 16:34:39,050 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=55.8 pTM=0.369 ipTM=0.24 tol=3.3
2024-12-08 16:35:32,413 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=55.7 pTM=0.368 ipTM=0.243 tol=2.75
2024-12-08 16:36:25,811 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=55.7 pTM=0.365 ipTM=0.24 tol=2.78
2024-12-08 16:37:19,222 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=55.9 pTM=0.367 ipTM=0.239 tol=2.34
2024-12-08 16:38:12,633 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=55.6 pTM=0.364 ipTM=0.24 tol=2.83
2024-12-08 16:39:05,974 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=55.8 pTM=0.368 ipTM=0.237 tol=3.01
2024-12-08 16:39:59,326 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=55.8 pTM=0.368 ipTM=0.235 tol=2.93
2024-12-08 16:39:59,327 alphafold2_multimer_v3_model_4_seed_000 took 1655.6s (30 recycles)
2024-12-08 16:40:53,892 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=54.7 pTM=0.351 ipTM=0.18
2024-12-08 16:41:47,404 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=55.4 pTM=0.352 ipTM=0.151 tol=18
2024-12-08 16:42:40,885 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=55.8 pTM=0.35 ipTM=0.161 tol=14.9
2024-12-08 16:43:34,321 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=56.4 pTM=0.35 ipTM=0.164 tol=8.26
2024-12-08 16:44:27,710 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=56.4 pTM=0.354 ipTM=0.165 tol=6.25
2024-12-08 16:45:21,083 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=56.4 pTM=0.352 ipTM=0.252 tol=6.24
2024-12-08 16:46:14,461 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=56.7 pTM=0.351 ipTM=0.32 tol=6.48
2024-12-08 16:47:07,848 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=56.8 pTM=0.352 ipTM=0.297 tol=4.91
2024-12-08 16:48:01,236 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=56.8 pTM=0.351 ipTM=0.271 tol=4.05
2024-12-08 16:48:54,608 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=56.9 pTM=0.353 ipTM=0.345 tol=7.11
2024-12-08 16:49:47,992 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=56.6 pTM=0.352 ipTM=0.321 tol=9.33
2024-12-08 16:50:41,388 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=57 pTM=0.354 ipTM=0.325 tol=9.32
2024-12-08 16:51:34,758 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=56.8 pTM=0.352 ipTM=0.329 tol=7.81
2024-12-08 16:52:28,200 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=56.8 pTM=0.35 ipTM=0.344 tol=6.18
2024-12-08 16:53:21,644 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=57 pTM=0.355 ipTM=0.363 tol=4.1
2024-12-08 16:54:15,080 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=56.6 pTM=0.349 ipTM=0.275 tol=3.38
2024-12-08 16:55:08,563 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=56.7 pTM=0.353 ipTM=0.314 tol=6.98
2024-12-08 16:56:02,026 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=56.8 pTM=0.354 ipTM=0.365 tol=5.52
2024-12-08 16:56:55,447 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=56.8 pTM=0.351 ipTM=0.365 tol=5.2
2024-12-08 16:57:48,792 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=56.6 pTM=0.349 ipTM=0.327 tol=8
2024-12-08 16:58:42,204 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=56.8 pTM=0.351 ipTM=0.35 tol=7.66
2024-12-08 16:59:35,613 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=57 pTM=0.353 ipTM=0.348 tol=6.55
2024-12-08 17:00:29,002 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=56.7 pTM=0.349 ipTM=0.316 tol=4.37
2024-12-08 17:01:22,392 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=56.8 pTM=0.35 ipTM=0.34 tol=3.15
2024-12-08 17:02:15,788 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=56.9 pTM=0.351 ipTM=0.331 tol=3.58
2024-12-08 17:03:09,158 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=56.7 pTM=0.349 ipTM=0.344 tol=3.81
2024-12-08 17:04:02,586 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=56.7 pTM=0.351 ipTM=0.331 tol=6.49
2024-12-08 17:04:55,995 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=56.8 pTM=0.35 ipTM=0.336 tol=5.05
2024-12-08 17:05:49,435 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=56.5 pTM=0.344 ipTM=0.331 tol=4
2024-12-08 17:06:42,887 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=56.7 pTM=0.351 ipTM=0.349 tol=3.54
2024-12-08 17:07:36,305 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=56.7 pTM=0.351 ipTM=0.371 tol=3.79
2024-12-08 17:07:36,306 alphafold2_multimer_v3_model_5_seed_000 took 1655.8s (30 recycles)
2024-12-08 17:07:37,478 reranking models by 'multimer' metric
2024-12-08 17:07:40,287 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 17:10:06,182 Relaxation took 148.7s
2024-12-08 17:10:06,182 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=56.9 pTM=0.363 ipTM=0.488
2024-12-08 17:11:52,303 Relaxation took 106.1s
2024-12-08 17:11:52,303 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=56.7 pTM=0.351 ipTM=0.371
2024-12-08 17:14:34,764 Relaxation took 162.5s
2024-12-08 17:14:34,765 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=55.8 pTM=0.368 ipTM=0.235
2024-12-08 17:16:37,751 Relaxation took 123.0s
2024-12-08 17:16:37,751 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=57.5 pTM=0.372 ipTM=0.218
2024-12-08 17:18:31,865 Relaxation took 114.1s
2024-12-08 17:18:31,865 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=57.1 pTM=0.347 ipTM=0.208
2024-12-08 17:18:34,828 Done