2024-12-08 14:45:40,937 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 14:45:41,294 Running on GPU
2024-12-08 14:45:44,849 Found 6 citations for tools or databases
2024-12-08 14:45:44,849 Query 1/1: SPSB4_IMMT (length 1031)
2024-12-08 14:45:45,153 Sleeping for 7s. Reason: PENDING
2024-12-08 14:45:52,416 Sleeping for 6s. Reason: PENDING
2024-12-08 14:45:58,676 Sleeping for 5s. Reason: PENDING
2024-12-08 14:46:03,941 Sleeping for 10s. Reason: PENDING
2024-12-08 14:46:14,204 Sleeping for 9s. Reason: PENDING
2024-12-08 14:46:23,467 Sleeping for 5s. Reason: RUNNING
2024-12-08 14:46:28,719 Sleeping for 9s. Reason: RUNNING
2024-12-08 14:46:37,980 Sleeping for 10s. Reason: RUNNING
2024-12-08 14:46:48,240 Sleeping for 6s. Reason: RUNNING
2024-12-08 14:46:54,499 Sleeping for 5s. Reason: RUNNING
2024-12-08 14:46:59,752 Sleeping for 9s. Reason: RUNNING
2024-12-08 14:47:09,008 Sleeping for 8s. Reason: RUNNING
2024-12-08 14:47:17,262 Sleeping for 7s. Reason: RUNNING
2024-12-08 14:47:24,521 Sleeping for 6s. Reason: RUNNING
2024-12-08 14:47:32,064 Sleeping for 7s. Reason: PENDING
2024-12-08 14:47:39,327 Sleeping for 8s. Reason: RUNNING
2024-12-08 14:47:47,747 Sleeping for 8s. Reason: RUNNING
2024-12-08 14:47:56,012 Sleeping for 5s. Reason: RUNNING
2024-12-08 14:48:01,281 Sleeping for 5s. Reason: RUNNING
2024-12-08 14:48:06,538 Sleeping for 8s. Reason: RUNNING
2024-12-08 14:48:14,798 Sleeping for 8s. Reason: RUNNING
2024-12-08 14:48:23,056 Sleeping for 8s. Reason: RUNNING
2024-12-08 14:48:33,018 Setting max_seq=508, max_extra_seq=2048
2024-12-08 14:52:19,899 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=61.8 pTM=0.385 ipTM=0.414
2024-12-08 14:52:47,423 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=66 pTM=0.329 ipTM=0.241 tol=20.1
2024-12-08 14:53:15,082 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=66.1 pTM=0.311 ipTM=0.167 tol=14.2
2024-12-08 14:53:42,788 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=65.7 pTM=0.304 ipTM=0.137 tol=11.5
2024-12-08 14:54:10,502 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=65.3 pTM=0.304 ipTM=0.134 tol=12.5
2024-12-08 14:54:38,254 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=62.8 pTM=0.31 ipTM=0.18 tol=12.4
2024-12-08 14:55:06,045 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=64.4 pTM=0.305 ipTM=0.143 tol=14.9
2024-12-08 14:55:33,830 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=64.1 pTM=0.309 ipTM=0.15 tol=7.06
2024-12-08 14:56:01,634 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64.3 pTM=0.317 ipTM=0.201 tol=9.54
2024-12-08 14:56:29,465 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64.8 pTM=0.305 ipTM=0.145 tol=9.95
2024-12-08 14:56:57,284 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=64.2 pTM=0.303 ipTM=0.136 tol=7.79
2024-12-08 14:57:25,101 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=63.7 pTM=0.308 ipTM=0.162 tol=9.55
2024-12-08 14:57:52,919 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=64.1 pTM=0.309 ipTM=0.162 tol=6.25
2024-12-08 14:58:20,726 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=64.1 pTM=0.309 ipTM=0.159 tol=5.37
2024-12-08 14:58:48,548 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=64.5 pTM=0.313 ipTM=0.192 tol=6.39
2024-12-08 14:59:16,346 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=64.7 pTM=0.308 ipTM=0.159 tol=11.6
2024-12-08 14:59:44,143 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=64.5 pTM=0.305 ipTM=0.147 tol=6.02
2024-12-08 15:00:11,950 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=63.6 pTM=0.303 ipTM=0.138 tol=7.24
2024-12-08 15:00:39,767 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=63.9 pTM=0.304 ipTM=0.133 tol=4.76
2024-12-08 15:01:07,568 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=64.1 pTM=0.307 ipTM=0.135 tol=4.59
2024-12-08 15:01:35,352 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=63.9 pTM=0.305 ipTM=0.139 tol=5.96
2024-12-08 15:02:03,162 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=63.7 pTM=0.308 ipTM=0.162 tol=5.55
2024-12-08 15:02:30,959 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=63.3 pTM=0.304 ipTM=0.144 tol=8.38
2024-12-08 15:02:58,764 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=63.6 pTM=0.303 ipTM=0.137 tol=6.14
2024-12-08 15:03:26,567 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=64 pTM=0.308 ipTM=0.151 tol=9.25
2024-12-08 15:03:54,345 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64 pTM=0.311 ipTM=0.161 tol=7.69
2024-12-08 15:04:22,106 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=63.8 pTM=0.307 ipTM=0.142 tol=5.49
2024-12-08 15:04:49,891 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=63.4 pTM=0.305 ipTM=0.142 tol=4.36
2024-12-08 15:05:17,676 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=63.2 pTM=0.306 ipTM=0.14 tol=5.26
2024-12-08 15:05:45,483 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=63.4 pTM=0.306 ipTM=0.147 tol=5.86
2024-12-08 15:06:13,289 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=63.3 pTM=0.305 ipTM=0.145 tol=7.04
2024-12-08 15:06:13,290 alphafold2_multimer_v3_model_1_seed_000 took 1053.7s (30 recycles)
2024-12-08 15:06:41,784 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=62.4 pTM=0.315 ipTM=0.186
2024-12-08 15:07:09,506 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=63.8 pTM=0.301 ipTM=0.144 tol=9.56
2024-12-08 15:07:37,266 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=63.7 pTM=0.3 ipTM=0.129 tol=8.7
2024-12-08 15:08:05,052 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=62.9 pTM=0.301 ipTM=0.13 tol=6.68
2024-12-08 15:08:32,836 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=63 pTM=0.3 ipTM=0.134 tol=4.27
2024-12-08 15:09:00,646 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=63.3 pTM=0.3 ipTM=0.132 tol=4
2024-12-08 15:09:28,468 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62.9 pTM=0.3 ipTM=0.13 tol=5.92
2024-12-08 15:09:56,281 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=63.5 pTM=0.302 ipTM=0.136 tol=5.3
2024-12-08 15:10:24,092 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=63.4 pTM=0.303 ipTM=0.134 tol=2.87
2024-12-08 15:10:51,914 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=63.3 pTM=0.3 ipTM=0.133 tol=2.71
2024-12-08 15:11:19,725 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=62.8 pTM=0.301 ipTM=0.131 tol=4.43
2024-12-08 15:11:47,516 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=62.7 pTM=0.301 ipTM=0.132 tol=4.46
2024-12-08 15:12:15,282 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=63.2 pTM=0.304 ipTM=0.134 tol=4.12
2024-12-08 15:12:43,050 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=63 pTM=0.304 ipTM=0.135 tol=4.39
2024-12-08 15:13:10,822 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=63.4 pTM=0.304 ipTM=0.135 tol=4.61
2024-12-08 15:13:38,580 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=63 pTM=0.305 ipTM=0.137 tol=8.49
2024-12-08 15:14:06,348 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=63.1 pTM=0.309 ipTM=0.14 tol=4.27
2024-12-08 15:14:34,124 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62.8 pTM=0.308 ipTM=0.139 tol=3.13
2024-12-08 15:15:01,897 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=63.3 pTM=0.308 ipTM=0.139 tol=3.83
2024-12-08 15:15:29,642 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=63.4 pTM=0.311 ipTM=0.141 tol=2.05
2024-12-08 15:15:57,394 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=63.4 pTM=0.31 ipTM=0.142 tol=4.4
2024-12-08 15:16:25,169 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=63.3 pTM=0.307 ipTM=0.139 tol=2.24
2024-12-08 15:16:52,916 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=63.1 pTM=0.308 ipTM=0.139 tol=2.95
2024-12-08 15:17:20,663 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=63.4 pTM=0.307 ipTM=0.136 tol=5.78
2024-12-08 15:17:48,401 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=63.7 pTM=0.308 ipTM=0.139 tol=6.44
2024-12-08 15:18:16,127 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=63.5 pTM=0.309 ipTM=0.138 tol=2.92
2024-12-08 15:18:43,868 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=63.7 pTM=0.312 ipTM=0.141 tol=2.34
2024-12-08 15:19:11,601 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=63.4 pTM=0.311 ipTM=0.141 tol=4.3
2024-12-08 15:19:39,338 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=63.6 pTM=0.311 ipTM=0.139 tol=4.21
2024-12-08 15:20:07,068 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=63.8 pTM=0.31 ipTM=0.141 tol=3.04
2024-12-08 15:20:34,815 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=63.5 pTM=0.309 ipTM=0.141 tol=2.21
2024-12-08 15:20:34,816 alphafold2_multimer_v3_model_2_seed_000 took 860.7s (30 recycles)
2024-12-08 15:21:03,535 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=63 pTM=0.309 ipTM=0.18
2024-12-08 15:21:31,322 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=63.6 pTM=0.315 ipTM=0.174 tol=23.5
2024-12-08 15:21:59,125 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=62.9 pTM=0.307 ipTM=0.165 tol=9.02
2024-12-08 15:22:26,928 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=62.9 pTM=0.307 ipTM=0.163 tol=5.33
2024-12-08 15:22:54,726 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=62.8 pTM=0.308 ipTM=0.164 tol=9.06
2024-12-08 15:23:22,472 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=62.8 pTM=0.308 ipTM=0.158 tol=8.29
2024-12-08 15:23:50,212 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=62.4 pTM=0.309 ipTM=0.157 tol=6
2024-12-08 15:24:17,925 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=62.6 pTM=0.311 ipTM=0.153 tol=5.46
2024-12-08 15:24:45,651 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=62.5 pTM=0.31 ipTM=0.16 tol=5.15
2024-12-08 15:25:13,356 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=62.8 pTM=0.309 ipTM=0.161 tol=4.12
2024-12-08 15:25:41,060 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=62.6 pTM=0.309 ipTM=0.171 tol=5.23
2024-12-08 15:26:08,749 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=62.6 pTM=0.309 ipTM=0.172 tol=5.68
2024-12-08 15:26:36,441 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=62.6 pTM=0.31 ipTM=0.168 tol=4.23
2024-12-08 15:27:04,124 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=62.6 pTM=0.31 ipTM=0.164 tol=3.98
2024-12-08 15:27:31,793 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=63.1 pTM=0.31 ipTM=0.177 tol=2.89
2024-12-08 15:27:59,475 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=62.6 pTM=0.309 ipTM=0.174 tol=4.07
2024-12-08 15:28:27,161 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=62.3 pTM=0.308 ipTM=0.17 tol=4.33
2024-12-08 15:28:54,838 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=62.5 pTM=0.308 ipTM=0.173 tol=1.44
2024-12-08 15:29:22,494 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=63 pTM=0.309 ipTM=0.181 tol=3.26
2024-12-08 15:29:50,155 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=63 pTM=0.309 ipTM=0.176 tol=3.58
2024-12-08 15:30:17,829 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=62.9 pTM=0.306 ipTM=0.168 tol=3.74
2024-12-08 15:30:45,499 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=63 pTM=0.305 ipTM=0.167 tol=3.03
2024-12-08 15:31:13,194 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=62.1 pTM=0.304 ipTM=0.162 tol=2.85
2024-12-08 15:31:40,914 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=63.2 pTM=0.305 ipTM=0.154 tol=2.89
2024-12-08 15:32:08,629 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=63.2 pTM=0.307 ipTM=0.158 tol=3.89
2024-12-08 15:32:36,347 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=63 pTM=0.307 ipTM=0.16 tol=3
2024-12-08 15:33:04,068 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=63 pTM=0.308 ipTM=0.159 tol=1.65
2024-12-08 15:33:31,793 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=62.8 pTM=0.306 ipTM=0.157 tol=4.55
2024-12-08 15:33:59,507 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=62.4 pTM=0.305 ipTM=0.153 tol=4.25
2024-12-08 15:34:27,220 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=63 pTM=0.305 ipTM=0.152 tol=2.73
2024-12-08 15:34:54,927 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=62.5 pTM=0.305 ipTM=0.156 tol=2.4
2024-12-08 15:34:54,928 alphafold2_multimer_v3_model_3_seed_000 took 859.3s (30 recycles)
2024-12-08 15:35:23,658 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=58.8 pTM=0.29 ipTM=0.13
2024-12-08 15:35:51,502 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=59.5 pTM=0.297 ipTM=0.135 tol=15.9
2024-12-08 15:36:19,349 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=58.9 pTM=0.298 ipTM=0.142 tol=13.7
2024-12-08 15:36:47,184 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=58.5 pTM=0.3 ipTM=0.152 tol=9.94
2024-12-08 15:37:15,051 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=58.4 pTM=0.298 ipTM=0.147 tol=13.2
2024-12-08 15:37:42,898 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=58.8 pTM=0.302 ipTM=0.156 tol=11.9
2024-12-08 15:38:10,750 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=59.2 pTM=0.301 ipTM=0.149 tol=8.95
2024-12-08 15:38:38,598 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=59.8 pTM=0.301 ipTM=0.153 tol=8.7
2024-12-08 15:39:06,565 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=59.4 pTM=0.298 ipTM=0.153 tol=6.95
2024-12-08 15:39:34,627 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=60.3 pTM=0.299 ipTM=0.171 tol=7.11
2024-12-08 15:40:02,679 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=59.7 pTM=0.298 ipTM=0.161 tol=6.37
2024-12-08 15:40:30,685 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=59.9 pTM=0.299 ipTM=0.174 tol=4.15
2024-12-08 15:40:58,636 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=59.8 pTM=0.297 ipTM=0.163 tol=4.39
2024-12-08 15:41:26,559 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=59.8 pTM=0.298 ipTM=0.174 tol=5.62
2024-12-08 15:41:54,475 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=59.8 pTM=0.296 ipTM=0.157 tol=7.75
2024-12-08 15:42:22,349 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=59.4 pTM=0.299 ipTM=0.179 tol=7.77
2024-12-08 15:42:50,233 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=59.6 pTM=0.299 ipTM=0.178 tol=7.34
2024-12-08 15:43:18,130 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=59.3 pTM=0.297 ipTM=0.173 tol=7.59
2024-12-08 15:43:45,965 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=59.9 pTM=0.3 ipTM=0.178 tol=6.38
2024-12-08 15:44:13,924 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=59.9 pTM=0.303 ipTM=0.205 tol=9.71
2024-12-08 15:44:41,767 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=60.5 pTM=0.312 ipTM=0.25 tol=8.52
2024-12-08 15:45:09,593 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=61.9 pTM=0.317 ipTM=0.275 tol=9.78
2024-12-08 15:45:37,498 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=60.7 pTM=0.312 ipTM=0.249 tol=9.83
2024-12-08 15:46:05,354 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=61.9 pTM=0.316 ipTM=0.262 tol=8.64
2024-12-08 15:46:33,218 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=62.2 pTM=0.326 ipTM=0.302 tol=5.82
2024-12-08 15:47:01,041 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=61.9 pTM=0.327 ipTM=0.306 tol=14.3
2024-12-08 15:47:28,872 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=61.8 pTM=0.331 ipTM=0.324 tol=4.91
2024-12-08 15:47:56,673 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=62 pTM=0.33 ipTM=0.326 tol=4.21
2024-12-08 15:48:24,537 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=62.2 pTM=0.334 ipTM=0.338 tol=3.56
2024-12-08 15:48:52,343 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=62.2 pTM=0.327 ipTM=0.319 tol=3.6
2024-12-08 15:49:20,158 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=61.9 pTM=0.326 ipTM=0.31 tol=3.47
2024-12-08 15:49:20,159 alphafold2_multimer_v3_model_4_seed_000 took 864.4s (30 recycles)
2024-12-08 15:49:48,771 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=60.1 pTM=0.312 ipTM=0.186
2024-12-08 15:50:16,554 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=61.5 pTM=0.305 ipTM=0.162 tol=9.41
2024-12-08 15:50:44,339 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=61.1 pTM=0.306 ipTM=0.172 tol=6.31
2024-12-08 15:51:12,111 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61.6 pTM=0.307 ipTM=0.183 tol=4.27
2024-12-08 15:51:39,893 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.8 pTM=0.31 ipTM=0.194 tol=4.47
2024-12-08 15:52:07,672 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=62.5 pTM=0.312 ipTM=0.209 tol=3.2
2024-12-08 15:52:35,468 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=62.6 pTM=0.319 ipTM=0.223 tol=3.09
2024-12-08 15:53:03,242 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=63.2 pTM=0.329 ipTM=0.266 tol=2.73
2024-12-08 15:53:31,018 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=62.6 pTM=0.331 ipTM=0.277 tol=2.5
2024-12-08 15:53:58,775 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=63.1 pTM=0.331 ipTM=0.284 tol=3.62
2024-12-08 15:54:26,563 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=62.4 pTM=0.324 ipTM=0.254 tol=2.74
2024-12-08 15:54:54,349 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=62.2 pTM=0.327 ipTM=0.254 tol=2.43
2024-12-08 15:55:22,143 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=62.2 pTM=0.33 ipTM=0.259 tol=3.94
2024-12-08 15:55:49,969 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=62.1 pTM=0.32 ipTM=0.215 tol=4.07
2024-12-08 15:56:17,818 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=61.3 pTM=0.307 ipTM=0.176 tol=2.83
2024-12-08 15:56:45,659 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=60.8 pTM=0.307 ipTM=0.17 tol=2.15
2024-12-08 15:57:13,516 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=60.8 pTM=0.307 ipTM=0.17 tol=2.37
2024-12-08 15:57:41,363 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=61 pTM=0.307 ipTM=0.172 tol=2.76
2024-12-08 15:58:09,193 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61.4 pTM=0.308 ipTM=0.178 tol=4.71
2024-12-08 15:58:36,981 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61.7 pTM=0.311 ipTM=0.197 tol=2.22
2024-12-08 15:59:04,839 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=61.7 pTM=0.313 ipTM=0.199 tol=3.77
2024-12-08 15:59:32,650 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=61.7 pTM=0.312 ipTM=0.209 tol=2.61
2024-12-08 16:00:00,459 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=61.3 pTM=0.312 ipTM=0.207 tol=3.59
2024-12-08 16:00:28,302 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=62 pTM=0.316 ipTM=0.223 tol=2.16
2024-12-08 16:00:56,107 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=62.2 pTM=0.321 ipTM=0.234 tol=2.26
2024-12-08 16:01:23,956 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=61.6 pTM=0.32 ipTM=0.226 tol=4.2
2024-12-08 16:01:51,767 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=61.8 pTM=0.321 ipTM=0.232 tol=4.21
2024-12-08 16:02:19,555 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=61.8 pTM=0.328 ipTM=0.259 tol=3.84
2024-12-08 16:02:47,367 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61.8 pTM=0.333 ipTM=0.282 tol=1.27
2024-12-08 16:03:15,146 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=62.4 pTM=0.335 ipTM=0.292 tol=2.54
2024-12-08 16:03:42,912 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=62.3 pTM=0.337 ipTM=0.301 tol=2.81
2024-12-08 16:03:42,913 alphafold2_multimer_v3_model_5_seed_000 took 861.9s (30 recycles)
2024-12-08 16:03:43,755 reranking models by 'multimer' metric
2024-12-08 16:03:45,140 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 16:05:04,642 Relaxation took 80.9s
2024-12-08 16:05:04,642 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=61.9 pTM=0.326 ipTM=0.31
2024-12-08 16:06:26,080 Relaxation took 81.4s
2024-12-08 16:06:26,081 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=62.3 pTM=0.337 ipTM=0.301
2024-12-08 16:08:01,624 Relaxation took 95.5s
2024-12-08 16:08:01,624 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=62.5 pTM=0.305 ipTM=0.156
2024-12-08 16:09:33,784 Relaxation took 92.2s
2024-12-08 16:09:33,784 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=63.3 pTM=0.305 ipTM=0.145
2024-12-08 16:11:03,282 Relaxation took 89.5s
2024-12-08 16:11:03,282 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=63.5 pTM=0.309 ipTM=0.141
2024-12-08 16:11:05,625 Done