2024-12-08 14:53:27,172 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 14:53:27,497 Running on GPU
2024-12-08 14:53:31,181 Found 6 citations for tools or databases
2024-12-08 14:53:31,181 Query 1/1: SPSB4_KLC2 (length 895)
2024-12-08 14:53:31,476 Sleeping for 5s. Reason: PENDING
2024-12-08 14:53:36,731 Sleeping for 9s. Reason: PENDING
2024-12-08 14:53:45,995 Sleeping for 8s. Reason: PENDING
2024-12-08 14:53:54,253 Sleeping for 7s. Reason: PENDING
2024-12-08 14:54:01,510 Sleeping for 7s. Reason: PENDING
2024-12-08 14:54:08,769 Sleeping for 5s. Reason: PENDING
2024-12-08 14:54:14,018 Sleeping for 8s. Reason: PENDING
2024-12-08 14:54:22,297 Sleeping for 6s. Reason: PENDING
2024-12-08 14:54:28,567 Sleeping for 6s. Reason: PENDING
2024-12-08 14:54:34,820 Sleeping for 10s. Reason: RUNNING
2024-12-08 14:54:45,079 Sleeping for 7s. Reason: RUNNING
2024-12-08 14:54:52,343 Sleeping for 6s. Reason: RUNNING
2024-12-08 14:54:58,592 Sleeping for 5s. Reason: RUNNING
2024-12-08 14:55:03,878 Sleeping for 8s. Reason: RUNNING
2024-12-08 14:55:12,137 Sleeping for 5s. Reason: RUNNING
2024-12-08 14:55:17,400 Sleeping for 8s. Reason: RUNNING
2024-12-08 14:55:25,658 Sleeping for 8s. Reason: RUNNING
2024-12-08 14:55:33,923 Sleeping for 7s. Reason: RUNNING
2024-12-08 14:55:41,186 Sleeping for 9s. Reason: RUNNING
2024-12-08 14:55:50,445 Sleeping for 8s. Reason: RUNNING
2024-12-08 14:55:58,708 Sleeping for 8s. Reason: RUNNING
2024-12-08 14:56:06,970 Sleeping for 6s. Reason: RUNNING
2024-12-08 14:56:13,227 Sleeping for 5s. Reason: RUNNING
2024-12-08 14:56:18,483 Sleeping for 9s. Reason: RUNNING
2024-12-08 14:56:29,053 Sleeping for 8s. Reason: PENDING
2024-12-08 14:56:37,316 Sleeping for 10s. Reason: RUNNING
2024-12-08 14:56:47,576 Sleeping for 6s. Reason: RUNNING
2024-12-08 14:56:53,833 Sleeping for 7s. Reason: RUNNING
2024-12-08 14:57:01,088 Sleeping for 8s. Reason: RUNNING
2024-12-08 14:57:09,347 Sleeping for 9s. Reason: RUNNING
2024-12-08 14:57:18,604 Sleeping for 8s. Reason: RUNNING
2024-12-08 14:57:26,865 Sleeping for 7s. Reason: RUNNING
2024-12-08 14:57:34,126 Sleeping for 7s. Reason: RUNNING
2024-12-08 14:57:41,381 Sleeping for 5s. Reason: RUNNING
2024-12-08 14:57:48,667 Setting max_seq=508, max_extra_seq=2048
2024-12-08 15:00:40,522 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=65.4 pTM=0.409 ipTM=0.256
2024-12-08 15:00:56,822 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=64.5 pTM=0.388 ipTM=0.178 tol=8.48
2024-12-08 15:01:13,163 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=64.9 pTM=0.382 ipTM=0.164 tol=7.3
2024-12-08 15:01:29,555 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=65.1 pTM=0.383 ipTM=0.163 tol=7.93
2024-12-08 15:01:45,973 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=65.2 pTM=0.379 ipTM=0.157 tol=2.68
2024-12-08 15:02:02,384 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=65.5 pTM=0.389 ipTM=0.216 tol=4.07
2024-12-08 15:02:18,831 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=65.8 pTM=0.382 ipTM=0.159 tol=3.91
2024-12-08 15:02:35,281 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=64.9 pTM=0.379 ipTM=0.177 tol=3.27
2024-12-08 15:02:51,747 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=65.7 pTM=0.38 ipTM=0.156 tol=2.74
2024-12-08 15:03:08,216 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=65.4 pTM=0.383 ipTM=0.186 tol=3.14
2024-12-08 15:03:24,703 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=65.5 pTM=0.38 ipTM=0.155 tol=2.33
2024-12-08 15:03:41,179 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=65.3 pTM=0.383 ipTM=0.18 tol=2.59
2024-12-08 15:03:57,657 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=65.6 pTM=0.379 ipTM=0.156 tol=2.66
2024-12-08 15:04:14,137 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=65.6 pTM=0.387 ipTM=0.198 tol=2.72
2024-12-08 15:04:30,627 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=65.8 pTM=0.382 ipTM=0.162 tol=2.53
2024-12-08 15:04:47,122 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=65.5 pTM=0.387 ipTM=0.196 tol=2.49
2024-12-08 15:05:03,617 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=65.6 pTM=0.382 ipTM=0.167 tol=1.81
2024-12-08 15:05:20,084 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=65.5 pTM=0.391 ipTM=0.204 tol=1.3
2024-12-08 15:05:36,573 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=65.6 pTM=0.38 ipTM=0.161 tol=1.79
2024-12-08 15:05:53,049 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=65.5 pTM=0.385 ipTM=0.192 tol=1.34
2024-12-08 15:06:09,548 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=65.6 pTM=0.383 ipTM=0.163 tol=1.98
2024-12-08 15:06:26,029 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=65.6 pTM=0.391 ipTM=0.206 tol=1.92
2024-12-08 15:06:42,534 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=65.6 pTM=0.381 ipTM=0.155 tol=2.44
2024-12-08 15:06:59,012 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=65.4 pTM=0.385 ipTM=0.189 tol=3.04
2024-12-08 15:07:15,503 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=65.6 pTM=0.384 ipTM=0.165 tol=2.6
2024-12-08 15:07:31,981 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=65.4 pTM=0.383 ipTM=0.182 tol=1.95
2024-12-08 15:07:48,475 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=65.4 pTM=0.379 ipTM=0.16 tol=1.99
2024-12-08 15:08:04,954 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=65.4 pTM=0.382 ipTM=0.176 tol=1.82
2024-12-08 15:08:21,454 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=65.6 pTM=0.377 ipTM=0.146 tol=3.04
2024-12-08 15:08:37,942 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=65.4 pTM=0.382 ipTM=0.173 tol=3.56
2024-12-08 15:08:54,450 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=65.7 pTM=0.38 ipTM=0.151 tol=2.5
2024-12-08 15:08:54,451 alphafold2_multimer_v3_model_1_seed_000 took 660.5s (30 recycles)
2024-12-08 15:09:11,458 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=65.9 pTM=0.422 ipTM=0.298
2024-12-08 15:09:27,960 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=65.4 pTM=0.519 ipTM=0.649 tol=10.1
2024-12-08 15:09:44,483 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.4 pTM=0.403 ipTM=0.215 tol=6.83
2024-12-08 15:10:01,006 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=65.9 pTM=0.393 ipTM=0.168 tol=3.87
2024-12-08 15:10:17,558 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=66.1 pTM=0.389 ipTM=0.149 tol=6.04
2024-12-08 15:10:34,085 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=65.9 pTM=0.387 ipTM=0.145 tol=3.16
2024-12-08 15:10:50,622 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=66.1 pTM=0.385 ipTM=0.137 tol=4.13
2024-12-08 15:11:07,146 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=65.4 pTM=0.383 ipTM=0.14 tol=2.35
2024-12-08 15:11:23,687 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=66.1 pTM=0.386 ipTM=0.149 tol=3.18
2024-12-08 15:11:40,223 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=65.8 pTM=0.388 ipTM=0.143 tol=3.08
2024-12-08 15:11:56,761 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=65.5 pTM=0.385 ipTM=0.139 tol=1.85
2024-12-08 15:12:13,302 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=65.7 pTM=0.386 ipTM=0.145 tol=3.85
2024-12-08 15:12:29,838 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=65.5 pTM=0.387 ipTM=0.148 tol=3.71
2024-12-08 15:12:46,374 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=65.6 pTM=0.388 ipTM=0.157 tol=3.96
2024-12-08 15:13:02,913 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=65.8 pTM=0.388 ipTM=0.154 tol=3.72
2024-12-08 15:13:19,452 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=65.7 pTM=0.389 ipTM=0.15 tol=2.9
2024-12-08 15:13:35,990 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=65.8 pTM=0.389 ipTM=0.15 tol=2.85
2024-12-08 15:13:52,521 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=65.7 pTM=0.39 ipTM=0.162 tol=4.36
2024-12-08 15:14:09,056 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=65.7 pTM=0.387 ipTM=0.151 tol=2.98
2024-12-08 15:14:25,581 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=65.7 pTM=0.387 ipTM=0.145 tol=3.2
2024-12-08 15:14:42,113 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=65.4 pTM=0.386 ipTM=0.145 tol=2.48
2024-12-08 15:14:58,641 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=65.8 pTM=0.388 ipTM=0.15 tol=3.47
2024-12-08 15:15:15,166 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=65.4 pTM=0.39 ipTM=0.148 tol=3.47
2024-12-08 15:15:31,701 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=65.5 pTM=0.387 ipTM=0.147 tol=2.88
2024-12-08 15:15:48,222 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=65.6 pTM=0.388 ipTM=0.153 tol=3.44
2024-12-08 15:16:04,752 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=65.6 pTM=0.385 ipTM=0.146 tol=3.61
2024-12-08 15:16:21,277 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=65.6 pTM=0.386 ipTM=0.148 tol=4.45
2024-12-08 15:16:37,803 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=65.6 pTM=0.385 ipTM=0.141 tol=3.65
2024-12-08 15:16:54,326 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=65.6 pTM=0.384 ipTM=0.14 tol=3.28
2024-12-08 15:17:10,856 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=65.6 pTM=0.387 ipTM=0.146 tol=4.18
2024-12-08 15:17:27,390 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=65.6 pTM=0.387 ipTM=0.147 tol=3.61
2024-12-08 15:17:27,391 alphafold2_multimer_v3_model_2_seed_000 took 512.4s (30 recycles)
2024-12-08 15:17:44,476 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=63.4 pTM=0.379 ipTM=0.148
2024-12-08 15:18:01,049 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=64.1 pTM=0.375 ipTM=0.141 tol=9.87
2024-12-08 15:18:17,618 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=64.2 pTM=0.377 ipTM=0.153 tol=6.07
2024-12-08 15:18:34,196 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=64.1 pTM=0.373 ipTM=0.143 tol=6.49
2024-12-08 15:18:50,743 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=64.3 pTM=0.376 ipTM=0.142 tol=10.8
2024-12-08 15:19:07,289 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=64.6 pTM=0.376 ipTM=0.136 tol=10.2
2024-12-08 15:19:23,838 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=65.2 pTM=0.378 ipTM=0.138 tol=7.45
2024-12-08 15:19:40,379 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=65 pTM=0.374 ipTM=0.139 tol=4.28
2024-12-08 15:19:56,935 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=65.2 pTM=0.375 ipTM=0.133 tol=5.66
2024-12-08 15:20:13,478 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=65.1 pTM=0.375 ipTM=0.133 tol=4.51
2024-12-08 15:20:30,023 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=65.3 pTM=0.379 ipTM=0.151 tol=8.93
2024-12-08 15:20:46,559 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=64.9 pTM=0.381 ipTM=0.168 tol=4.48
2024-12-08 15:21:03,083 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=65.1 pTM=0.381 ipTM=0.16 tol=7.09
2024-12-08 15:21:19,613 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=64.9 pTM=0.386 ipTM=0.184 tol=2.88
2024-12-08 15:21:36,138 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=65.1 pTM=0.384 ipTM=0.166 tol=2.22
2024-12-08 15:21:52,669 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=64.8 pTM=0.386 ipTM=0.169 tol=2.03
2024-12-08 15:22:09,213 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=64.8 pTM=0.375 ipTM=0.135 tol=2.46
2024-12-08 15:22:25,756 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=64.6 pTM=0.378 ipTM=0.144 tol=2.15
2024-12-08 15:22:42,303 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=64.8 pTM=0.374 ipTM=0.131 tol=2.79
2024-12-08 15:22:58,855 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=64.8 pTM=0.372 ipTM=0.131 tol=3.86
2024-12-08 15:23:15,408 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=64.9 pTM=0.374 ipTM=0.133 tol=4.2
2024-12-08 15:23:31,962 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=64.4 pTM=0.371 ipTM=0.134 tol=2.91
2024-12-08 15:23:48,532 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=64.6 pTM=0.371 ipTM=0.13 tol=3.96
2024-12-08 15:24:05,107 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=64.6 pTM=0.37 ipTM=0.133 tol=2.79
2024-12-08 15:24:21,675 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=65.1 pTM=0.374 ipTM=0.137 tol=3.61
2024-12-08 15:24:38,246 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=64.4 pTM=0.371 ipTM=0.127 tol=4.21
2024-12-08 15:24:54,813 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=64.6 pTM=0.372 ipTM=0.128 tol=5.16
2024-12-08 15:25:11,395 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=64.7 pTM=0.368 ipTM=0.128 tol=4.18
2024-12-08 15:25:27,969 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=65.1 pTM=0.373 ipTM=0.145 tol=5.62
2024-12-08 15:25:44,535 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=64.9 pTM=0.369 ipTM=0.133 tol=4.23
2024-12-08 15:26:01,115 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=65.2 pTM=0.374 ipTM=0.137 tol=3.77
2024-12-08 15:26:01,116 alphafold2_multimer_v3_model_3_seed_000 took 513.2s (30 recycles)
2024-12-08 15:26:18,198 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=62.7 pTM=0.412 ipTM=0.272
2024-12-08 15:26:34,766 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=62.8 pTM=0.39 ipTM=0.163 tol=20.7
2024-12-08 15:26:51,334 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=63.2 pTM=0.384 ipTM=0.143 tol=12
2024-12-08 15:27:07,915 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=63.2 pTM=0.385 ipTM=0.157 tol=6.98
2024-12-08 15:27:24,499 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=63.7 pTM=0.38 ipTM=0.145 tol=3.3
2024-12-08 15:27:41,060 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=63.5 pTM=0.386 ipTM=0.17 tol=3.14
2024-12-08 15:27:57,645 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=63.8 pTM=0.379 ipTM=0.146 tol=2.9
2024-12-08 15:28:14,200 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=62.9 pTM=0.379 ipTM=0.166 tol=3.32
2024-12-08 15:28:30,773 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=63.4 pTM=0.378 ipTM=0.153 tol=4.32
2024-12-08 15:28:47,326 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=63.2 pTM=0.385 ipTM=0.172 tol=4.38
2024-12-08 15:29:03,892 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=63.3 pTM=0.385 ipTM=0.171 tol=5.48
2024-12-08 15:29:20,457 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=63.6 pTM=0.399 ipTM=0.208 tol=5.27
2024-12-08 15:29:37,003 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=63.5 pTM=0.395 ipTM=0.204 tol=6.72
2024-12-08 15:29:53,571 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=63.8 pTM=0.388 ipTM=0.179 tol=7.35
2024-12-08 15:30:10,150 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=63.5 pTM=0.381 ipTM=0.153 tol=3.77
2024-12-08 15:30:26,737 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=63.4 pTM=0.381 ipTM=0.163 tol=3.59
2024-12-08 15:30:43,300 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=63.8 pTM=0.393 ipTM=0.186 tol=8.33
2024-12-08 15:30:59,873 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=63.8 pTM=0.409 ipTM=0.235 tol=6.26
2024-12-08 15:31:16,433 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=63.8 pTM=0.395 ipTM=0.189 tol=4.71
2024-12-08 15:31:33,008 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=63.8 pTM=0.391 ipTM=0.186 tol=5.13
2024-12-08 15:31:49,590 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=63.9 pTM=0.384 ipTM=0.157 tol=6.77
2024-12-08 15:32:06,163 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=63.3 pTM=0.385 ipTM=0.174 tol=6.48
2024-12-08 15:32:22,723 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=63.3 pTM=0.386 ipTM=0.172 tol=5.61
2024-12-08 15:32:39,286 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=63.7 pTM=0.393 ipTM=0.19 tol=6.86
2024-12-08 15:32:55,855 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=63.6 pTM=0.388 ipTM=0.172 tol=7.69
2024-12-08 15:33:12,425 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=63.5 pTM=0.388 ipTM=0.176 tol=6.76
2024-12-08 15:33:28,996 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=63.3 pTM=0.378 ipTM=0.146 tol=3.43
2024-12-08 15:33:45,561 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=63.6 pTM=0.384 ipTM=0.169 tol=4.25
2024-12-08 15:34:02,136 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=63.8 pTM=0.375 ipTM=0.139 tol=8.2
2024-12-08 15:34:18,696 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=63.3 pTM=0.383 ipTM=0.163 tol=6.76
2024-12-08 15:34:35,281 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=63.7 pTM=0.381 ipTM=0.148 tol=5.95
2024-12-08 15:34:35,282 alphafold2_multimer_v3_model_4_seed_000 took 513.7s (30 recycles)
2024-12-08 15:34:52,348 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=63 pTM=0.403 ipTM=0.2
2024-12-08 15:35:08,933 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=62.8 pTM=0.389 ipTM=0.153 tol=22.2
2024-12-08 15:35:25,493 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=64.2 pTM=0.392 ipTM=0.179 tol=9.65
2024-12-08 15:35:42,008 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=65.4 pTM=0.441 ipTM=0.443 tol=6.41
2024-12-08 15:35:58,512 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=67.1 pTM=0.518 ipTM=0.645 tol=6.7
2024-12-08 15:36:15,024 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=67.1 pTM=0.512 ipTM=0.617 tol=3.34
2024-12-08 15:36:31,531 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=67.3 pTM=0.524 ipTM=0.652 tol=2.17
2024-12-08 15:36:48,030 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=66.9 pTM=0.513 ipTM=0.628 tol=2.95
2024-12-08 15:37:04,543 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=67.5 pTM=0.532 ipTM=0.671 tol=0.912
2024-12-08 15:37:21,062 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67.4 pTM=0.525 ipTM=0.657 tol=1.41
2024-12-08 15:37:37,569 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=67.4 pTM=0.533 ipTM=0.679 tol=1.92
2024-12-08 15:37:54,079 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67.2 pTM=0.527 ipTM=0.66 tol=2.56
2024-12-08 15:38:10,580 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=67.2 pTM=0.532 ipTM=0.676 tol=3.02
2024-12-08 15:38:27,086 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=67.6 pTM=0.529 ipTM=0.666 tol=2.12
2024-12-08 15:38:43,584 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=67.6 pTM=0.535 ipTM=0.676 tol=3.31
2024-12-08 15:39:00,085 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.5 pTM=0.531 ipTM=0.669 tol=2.97
2024-12-08 15:39:16,581 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67.6 pTM=0.53 ipTM=0.667 tol=1.23
2024-12-08 15:39:33,095 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=67.6 pTM=0.533 ipTM=0.672 tol=1.57
2024-12-08 15:39:49,582 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=67.2 pTM=0.53 ipTM=0.667 tol=4.9
2024-12-08 15:40:06,081 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=67.4 pTM=0.53 ipTM=0.669 tol=1.45
2024-12-08 15:40:22,586 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=67.5 pTM=0.529 ipTM=0.666 tol=2.15
2024-12-08 15:40:39,088 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=67.4 pTM=0.529 ipTM=0.661 tol=2.4
2024-12-08 15:40:55,590 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=67.5 pTM=0.534 ipTM=0.667 tol=6.3
2024-12-08 15:41:12,096 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=67.5 pTM=0.531 ipTM=0.661 tol=2.62
2024-12-08 15:41:28,590 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=67.5 pTM=0.529 ipTM=0.654 tol=2.41
2024-12-08 15:41:45,080 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=67.3 pTM=0.531 ipTM=0.664 tol=2.97
2024-12-08 15:42:01,582 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=67.6 pTM=0.535 ipTM=0.668 tol=2.91
2024-12-08 15:42:18,068 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=67.6 pTM=0.532 ipTM=0.661 tol=2
2024-12-08 15:42:34,574 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=67.6 pTM=0.531 ipTM=0.664 tol=1.99
2024-12-08 15:42:51,070 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=67.7 pTM=0.533 ipTM=0.663 tol=1.37
2024-12-08 15:43:07,560 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=67.8 pTM=0.538 ipTM=0.672 tol=1.33
2024-12-08 15:43:07,560 alphafold2_multimer_v3_model_5_seed_000 took 511.8s (30 recycles)
2024-12-08 15:43:08,060 reranking models by 'multimer' metric
2024-12-08 15:43:11,349 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 15:44:03,932 Relaxation took 55.9s
2024-12-08 15:44:03,933 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67.8 pTM=0.538 ipTM=0.672
2024-12-08 15:45:14,865 Relaxation took 70.9s
2024-12-08 15:45:14,865 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=65.7 pTM=0.38 ipTM=0.151
2024-12-08 15:46:32,733 Relaxation took 77.9s
2024-12-08 15:46:32,734 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=65.6 pTM=0.387 ipTM=0.147
2024-12-08 15:47:39,370 Relaxation took 66.6s
2024-12-08 15:47:39,370 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=63.7 pTM=0.381 ipTM=0.148
2024-12-08 15:48:38,392 Relaxation took 59.0s
2024-12-08 15:48:38,393 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=65.2 pTM=0.374 ipTM=0.137
2024-12-08 15:48:39,944 Done