2024-12-08 15:11:39,993 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 15:11:40,343 Running on GPU
2024-12-08 15:11:44,163 Found 6 citations for tools or databases
2024-12-08 15:11:44,164 Query 1/1: SPSB4_PCDH20 (length 1224)
2024-12-08 15:11:44,450 Sleeping for 5s. Reason: PENDING
2024-12-08 15:11:49,712 Sleeping for 10s. Reason: RUNNING
2024-12-08 15:11:59,968 Sleeping for 9s. Reason: RUNNING
2024-12-08 15:12:09,237 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:12:15,499 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:12:21,763 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:12:27,020 Sleeping for 10s. Reason: RUNNING
2024-12-08 15:12:37,289 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:12:43,545 Sleeping for 9s. Reason: RUNNING
2024-12-08 15:12:52,805 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:12:58,069 Sleeping for 7s. Reason: RUNNING
2024-12-08 15:13:05,328 Sleeping for 9s. Reason: RUNNING
2024-12-08 15:13:14,588 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:13:20,840 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:13:26,096 Sleeping for 8s. Reason: RUNNING
2024-12-08 15:13:34,354 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:13:39,618 Sleeping for 7s. Reason: RUNNING
2024-12-08 15:13:46,874 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:13:53,129 Sleeping for 10s. Reason: RUNNING
2024-12-08 15:14:03,390 Sleeping for 7s. Reason: RUNNING
2024-12-08 15:14:10,650 Sleeping for 9s. Reason: RUNNING
2024-12-08 15:14:19,909 Sleeping for 8s. Reason: RUNNING
2024-12-08 15:14:28,184 Sleeping for 8s. Reason: RUNNING
2024-12-08 15:14:36,440 Sleeping for 7s. Reason: RUNNING
2024-12-08 15:14:43,701 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:14:49,966 Sleeping for 9s. Reason: RUNNING
2024-12-08 15:14:59,223 Sleeping for 7s. Reason: RUNNING
2024-12-08 15:15:06,481 Sleeping for 7s. Reason: RUNNING
2024-12-08 15:15:13,746 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:15:20,012 Sleeping for 9s. Reason: RUNNING
2024-12-08 15:15:29,276 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:15:35,530 Sleeping for 8s. Reason: RUNNING
2024-12-08 15:15:43,786 Sleeping for 8s. Reason: RUNNING
2024-12-08 15:15:52,043 Sleeping for 7s. Reason: RUNNING
2024-12-08 15:15:59,307 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:16:04,570 Sleeping for 10s. Reason: RUNNING
2024-12-08 15:16:14,830 Sleeping for 7s. Reason: RUNNING
2024-12-08 15:16:22,087 Sleeping for 10s. Reason: RUNNING
2024-12-08 15:16:34,186 Sleeping for 9s. Reason: PENDING
2024-12-08 15:16:43,444 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:16:49,705 Sleeping for 10s. Reason: RUNNING
2024-12-08 15:16:59,974 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:17:05,230 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:17:11,482 Sleeping for 7s. Reason: RUNNING
2024-12-08 15:17:18,745 Sleeping for 7s. Reason: RUNNING
2024-12-08 15:17:26,001 Sleeping for 8s. Reason: RUNNING
2024-12-08 15:17:34,263 Sleeping for 10s. Reason: RUNNING
2024-12-08 15:17:44,527 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:17:49,785 Sleeping for 9s. Reason: RUNNING
2024-12-08 15:17:59,045 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:18:05,307 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:18:11,571 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:18:16,824 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:18:22,085 Sleeping for 10s. Reason: RUNNING
2024-12-08 15:18:32,349 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:18:37,608 Sleeping for 7s. Reason: RUNNING
2024-12-08 15:18:44,875 Sleeping for 7s. Reason: RUNNING
2024-12-08 15:18:52,136 Sleeping for 7s. Reason: RUNNING
2024-12-08 15:18:59,388 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:19:04,652 Sleeping for 8s. Reason: RUNNING
2024-12-08 15:19:17,779 Setting max_seq=508, max_extra_seq=2048
2024-12-08 15:22:18,799 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=71.6 pTM=0.337 ipTM=0.173
2024-12-08 15:22:53,944 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=71.9 pTM=0.331 ipTM=0.156 tol=68.8
2024-12-08 15:23:29,094 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=71.3 pTM=0.329 ipTM=0.169 tol=12.7
2024-12-08 15:24:04,272 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=71.8 pTM=0.329 ipTM=0.167 tol=4.09
2024-12-08 15:24:39,449 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=72.1 pTM=0.33 ipTM=0.164 tol=5.83
2024-12-08 15:25:14,650 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=72.2 pTM=0.328 ipTM=0.162 tol=4.73
2024-12-08 15:25:49,797 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=72 pTM=0.331 ipTM=0.176 tol=3.2
2024-12-08 15:26:24,939 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=72 pTM=0.333 ipTM=0.184 tol=4.64
2024-12-08 15:27:00,066 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=72 pTM=0.336 ipTM=0.191 tol=4.84
2024-12-08 15:27:35,192 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=71.9 pTM=0.336 ipTM=0.198 tol=4.15
2024-12-08 15:28:10,316 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=71.8 pTM=0.338 ipTM=0.199 tol=5.34
2024-12-08 15:28:45,437 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=71.4 pTM=0.337 ipTM=0.203 tol=4.84
2024-12-08 15:29:20,556 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=71.7 pTM=0.342 ipTM=0.202 tol=3.78
2024-12-08 15:29:55,698 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=71.3 pTM=0.335 ipTM=0.197 tol=3.26
2024-12-08 15:30:30,840 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=71.5 pTM=0.338 ipTM=0.195 tol=3.07
2024-12-08 15:31:06,027 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=71.5 pTM=0.338 ipTM=0.192 tol=3.45
2024-12-08 15:31:41,212 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=71.9 pTM=0.339 ipTM=0.19 tol=5.01
2024-12-08 15:32:16,355 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=71.8 pTM=0.341 ipTM=0.197 tol=3.52
2024-12-08 15:32:51,480 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=71.6 pTM=0.339 ipTM=0.198 tol=2.9
2024-12-08 15:33:26,620 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=71.4 pTM=0.338 ipTM=0.192 tol=1.81
2024-12-08 15:34:01,759 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=71.6 pTM=0.341 ipTM=0.198 tol=5.44
2024-12-08 15:34:36,879 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=71.6 pTM=0.339 ipTM=0.192 tol=4.53
2024-12-08 15:35:12,001 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=71.8 pTM=0.338 ipTM=0.191 tol=2.84
2024-12-08 15:35:47,133 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=71.6 pTM=0.337 ipTM=0.188 tol=1.21
2024-12-08 15:36:22,267 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=71.8 pTM=0.336 ipTM=0.186 tol=4.2
2024-12-08 15:36:57,404 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=71.8 pTM=0.336 ipTM=0.196 tol=3.47
2024-12-08 15:37:32,545 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=71.8 pTM=0.336 ipTM=0.185 tol=3.76
2024-12-08 15:38:07,702 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=72 pTM=0.34 ipTM=0.191 tol=3.39
2024-12-08 15:38:42,859 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=71.7 pTM=0.337 ipTM=0.187 tol=4.49
2024-12-08 15:39:18,189 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=71.9 pTM=0.34 ipTM=0.189 tol=5.39
2024-12-08 15:39:53,607 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=71.7 pTM=0.338 ipTM=0.185 tol=11.2
2024-12-08 15:39:53,608 alphafold2_multimer_v3_model_1_seed_000 took 1229.2s (30 recycles)
2024-12-08 15:40:30,181 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=71.4 pTM=0.34 ipTM=0.183
2024-12-08 15:41:05,616 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=72 pTM=0.343 ipTM=0.181 tol=19.5
2024-12-08 15:41:41,135 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=71.9 pTM=0.335 ipTM=0.169 tol=24.5
2024-12-08 15:42:16,618 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=72.6 pTM=0.341 ipTM=0.179 tol=17.4
2024-12-08 15:42:52,101 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=72.5 pTM=0.342 ipTM=0.179 tol=13.3
2024-12-08 15:43:27,568 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=72.6 pTM=0.342 ipTM=0.181 tol=11.4
2024-12-08 15:44:02,934 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=72.3 pTM=0.343 ipTM=0.181 tol=6.92
2024-12-08 15:44:38,276 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=72.4 pTM=0.337 ipTM=0.166 tol=5.71
2024-12-08 15:45:13,637 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=72.6 pTM=0.335 ipTM=0.157 tol=4.49
2024-12-08 15:45:49,024 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=72.3 pTM=0.331 ipTM=0.16 tol=4.08
2024-12-08 15:46:24,358 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=72.2 pTM=0.329 ipTM=0.147 tol=8.92
2024-12-08 15:46:59,768 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=72.1 pTM=0.327 ipTM=0.146 tol=6.58
2024-12-08 15:47:35,158 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=71.8 pTM=0.328 ipTM=0.146 tol=6
2024-12-08 15:48:10,515 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=71.9 pTM=0.327 ipTM=0.149 tol=4.07
2024-12-08 15:48:45,881 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=72.2 pTM=0.334 ipTM=0.157 tol=5.46
2024-12-08 15:49:21,253 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=72.4 pTM=0.333 ipTM=0.158 tol=4.21
2024-12-08 15:49:56,610 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=72.4 pTM=0.331 ipTM=0.153 tol=2.77
2024-12-08 15:50:31,958 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=72.8 pTM=0.335 ipTM=0.153 tol=3.71
2024-12-08 15:51:07,300 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=72.4 pTM=0.336 ipTM=0.163 tol=3.11
2024-12-08 15:51:42,633 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=72.2 pTM=0.333 ipTM=0.158 tol=3.96
2024-12-08 15:52:17,958 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=72.1 pTM=0.336 ipTM=0.161 tol=4.8
2024-12-08 15:52:53,266 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=71.9 pTM=0.338 ipTM=0.169 tol=6.07
2024-12-08 15:53:28,577 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=71.8 pTM=0.335 ipTM=0.164 tol=4.27
2024-12-08 15:54:03,869 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=71.9 pTM=0.334 ipTM=0.165 tol=2.27
2024-12-08 15:54:39,216 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=71.6 pTM=0.33 ipTM=0.151 tol=6.32
2024-12-08 15:55:14,555 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=71.2 pTM=0.327 ipTM=0.145 tol=7.68
2024-12-08 15:55:49,982 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=71.2 pTM=0.329 ipTM=0.144 tol=11.3
2024-12-08 15:56:25,435 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=71.8 pTM=0.33 ipTM=0.148 tol=18.9
2024-12-08 15:57:00,881 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=71.6 pTM=0.33 ipTM=0.153 tol=6.07
2024-12-08 15:57:36,285 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=72 pTM=0.338 ipTM=0.161 tol=11.2
2024-12-08 15:58:11,661 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=72.2 pTM=0.332 ipTM=0.153 tol=7.45
2024-12-08 15:58:11,662 alphafold2_multimer_v3_model_2_seed_000 took 1096.9s (30 recycles)
2024-12-08 15:58:48,153 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=71 pTM=0.365 ipTM=0.213
2024-12-08 15:59:23,557 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=71.4 pTM=0.353 ipTM=0.169 tol=71.2
2024-12-08 15:59:58,851 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=71.9 pTM=0.364 ipTM=0.181 tol=11.7
2024-12-08 16:00:34,212 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=72.2 pTM=0.363 ipTM=0.181 tol=5.43
2024-12-08 16:01:09,508 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=72.1 pTM=0.365 ipTM=0.189 tol=3.63
2024-12-08 16:01:44,822 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=71.9 pTM=0.361 ipTM=0.187 tol=3.92
2024-12-08 16:02:20,129 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=71.9 pTM=0.363 ipTM=0.192 tol=2.05
2024-12-08 16:02:55,441 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=71.8 pTM=0.362 ipTM=0.191 tol=1.6
2024-12-08 16:03:30,743 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=71.8 pTM=0.364 ipTM=0.199 tol=2.99
2024-12-08 16:04:06,051 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=71.9 pTM=0.366 ipTM=0.2 tol=2.07
2024-12-08 16:04:41,424 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=71.9 pTM=0.366 ipTM=0.203 tol=2.26
2024-12-08 16:05:16,749 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=71.8 pTM=0.366 ipTM=0.2 tol=2.02
2024-12-08 16:05:52,063 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=71.7 pTM=0.367 ipTM=0.205 tol=2.17
2024-12-08 16:06:27,371 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=71.6 pTM=0.363 ipTM=0.2 tol=1.63
2024-12-08 16:07:02,683 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=71.6 pTM=0.366 ipTM=0.204 tol=1.18
2024-12-08 16:07:38,080 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=71.7 pTM=0.366 ipTM=0.202 tol=1.26
2024-12-08 16:08:13,420 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=71.8 pTM=0.367 ipTM=0.204 tol=1.28
2024-12-08 16:08:48,800 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=71.8 pTM=0.37 ipTM=0.208 tol=1.13
2024-12-08 16:09:24,102 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=71.7 pTM=0.368 ipTM=0.207 tol=1.89
2024-12-08 16:09:59,444 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=71.6 pTM=0.367 ipTM=0.202 tol=1.78
2024-12-08 16:10:34,754 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=71.6 pTM=0.366 ipTM=0.205 tol=1.6
2024-12-08 16:11:10,122 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=71.6 pTM=0.364 ipTM=0.201 tol=1.5
2024-12-08 16:11:45,415 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=71.4 pTM=0.366 ipTM=0.205 tol=1.85
2024-12-08 16:12:20,780 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=71.5 pTM=0.365 ipTM=0.199 tol=2.08
2024-12-08 16:12:56,097 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=71.4 pTM=0.362 ipTM=0.196 tol=3.02
2024-12-08 16:13:31,388 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=71.6 pTM=0.362 ipTM=0.199 tol=2.55
2024-12-08 16:14:06,668 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=71.6 pTM=0.363 ipTM=0.199 tol=1.36
2024-12-08 16:14:41,965 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=71.8 pTM=0.366 ipTM=0.203 tol=1.39
2024-12-08 16:15:17,254 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=71.6 pTM=0.366 ipTM=0.203 tol=1.97
2024-12-08 16:15:52,544 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=71.6 pTM=0.366 ipTM=0.205 tol=1.25
2024-12-08 16:16:27,836 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=71.9 pTM=0.37 ipTM=0.206 tol=2.39
2024-12-08 16:16:27,837 alphafold2_multimer_v3_model_3_seed_000 took 1095.0s (30 recycles)
2024-12-08 16:17:04,436 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=70.5 pTM=0.35 ipTM=0.186
2024-12-08 16:17:39,793 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=71.1 pTM=0.343 ipTM=0.167 tol=51.1
2024-12-08 16:18:15,081 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=71.2 pTM=0.343 ipTM=0.168 tol=17.3
2024-12-08 16:18:50,348 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=71.1 pTM=0.36 ipTM=0.194 tol=12.4
2024-12-08 16:19:25,631 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=70.8 pTM=0.362 ipTM=0.198 tol=7.09
2024-12-08 16:20:00,917 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=70.7 pTM=0.363 ipTM=0.202 tol=4.56
2024-12-08 16:20:36,223 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=71 pTM=0.353 ipTM=0.18 tol=6.17
2024-12-08 16:21:11,540 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=70.9 pTM=0.359 ipTM=0.19 tol=6.27
2024-12-08 16:21:46,847 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=71.2 pTM=0.352 ipTM=0.162 tol=10.6
2024-12-08 16:22:22,163 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=71.6 pTM=0.359 ipTM=0.176 tol=13.9
2024-12-08 16:22:57,457 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=71.1 pTM=0.366 ipTM=0.212 tol=12.1
2024-12-08 16:23:32,775 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=70.6 pTM=0.363 ipTM=0.202 tol=11.4
2024-12-08 16:24:08,086 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=71.2 pTM=0.365 ipTM=0.195 tol=5.66
2024-12-08 16:24:43,377 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=71.1 pTM=0.361 ipTM=0.195 tol=3.74
2024-12-08 16:25:18,666 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=70.9 pTM=0.364 ipTM=0.2 tol=3.82
2024-12-08 16:25:53,938 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=71.3 pTM=0.364 ipTM=0.192 tol=3.65
2024-12-08 16:26:29,252 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=71.3 pTM=0.363 ipTM=0.197 tol=3.5
2024-12-08 16:27:04,549 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=71.6 pTM=0.367 ipTM=0.197 tol=3.13
2024-12-08 16:27:39,837 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=71.4 pTM=0.365 ipTM=0.202 tol=2.72
2024-12-08 16:28:15,134 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=71 pTM=0.359 ipTM=0.193 tol=2.49
2024-12-08 16:28:50,439 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=71.2 pTM=0.359 ipTM=0.189 tol=2.23
2024-12-08 16:29:25,751 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=71.1 pTM=0.361 ipTM=0.198 tol=2.66
2024-12-08 16:30:01,065 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=71 pTM=0.361 ipTM=0.198 tol=5.05
2024-12-08 16:30:36,351 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=71.2 pTM=0.361 ipTM=0.198 tol=3.35
2024-12-08 16:31:11,657 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=71 pTM=0.362 ipTM=0.193 tol=3.13
2024-12-08 16:31:46,955 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=70.9 pTM=0.359 ipTM=0.19 tol=4.38
2024-12-08 16:32:22,252 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=71.1 pTM=0.362 ipTM=0.192 tol=6.52
2024-12-08 16:32:57,532 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=71.7 pTM=0.365 ipTM=0.204 tol=5.5
2024-12-08 16:33:32,832 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=71.1 pTM=0.362 ipTM=0.195 tol=5.17
2024-12-08 16:34:08,125 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=71.6 pTM=0.365 ipTM=0.199 tol=5.14
2024-12-08 16:34:43,422 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=71.4 pTM=0.365 ipTM=0.194 tol=4.88
2024-12-08 16:34:43,424 alphafold2_multimer_v3_model_4_seed_000 took 1094.4s (30 recycles)
2024-12-08 16:35:20,041 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=70.2 pTM=0.323 ipTM=0.131
2024-12-08 16:35:55,283 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=71.1 pTM=0.349 ipTM=0.239 tol=40
2024-12-08 16:36:30,480 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=71.2 pTM=0.356 ipTM=0.246 tol=6.22
2024-12-08 16:37:05,680 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=71.4 pTM=0.35 ipTM=0.195 tol=6.4
2024-12-08 16:37:40,914 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=71.7 pTM=0.349 ipTM=0.209 tol=5.79
2024-12-08 16:38:16,117 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=71.6 pTM=0.353 ipTM=0.18 tol=4.23
2024-12-08 16:38:51,351 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=71.4 pTM=0.345 ipTM=0.179 tol=3.86
2024-12-08 16:39:26,609 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=71.3 pTM=0.343 ipTM=0.164 tol=2.84
2024-12-08 16:40:01,879 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=71.4 pTM=0.344 ipTM=0.16 tol=4.11
2024-12-08 16:40:37,161 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=71.8 pTM=0.344 ipTM=0.169 tol=4.41
2024-12-08 16:41:12,382 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=71.6 pTM=0.35 ipTM=0.19 tol=3.01
2024-12-08 16:41:47,625 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=71.2 pTM=0.347 ipTM=0.166 tol=5.07
2024-12-08 16:42:22,915 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=70.4 pTM=0.348 ipTM=0.149 tol=11
2024-12-08 16:42:58,191 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=71.6 pTM=0.345 ipTM=0.164 tol=5.61
2024-12-08 16:43:33,445 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=71.3 pTM=0.349 ipTM=0.161 tol=2.95
2024-12-08 16:44:08,716 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=71.2 pTM=0.348 ipTM=0.161 tol=3.89
2024-12-08 16:44:43,985 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=71.4 pTM=0.349 ipTM=0.16 tol=2.32
2024-12-08 16:45:19,263 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=71.6 pTM=0.349 ipTM=0.165 tol=2.14
2024-12-08 16:45:54,526 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=71.4 pTM=0.348 ipTM=0.162 tol=3.24
2024-12-08 16:46:29,789 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=71.3 pTM=0.348 ipTM=0.165 tol=3.19
2024-12-08 16:47:05,050 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=71.2 pTM=0.352 ipTM=0.169 tol=8.4
2024-12-08 16:47:40,309 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=71.4 pTM=0.349 ipTM=0.157 tol=7.61
2024-12-08 16:48:15,550 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=71.4 pTM=0.351 ipTM=0.164 tol=5.02
2024-12-08 16:48:50,799 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=71.3 pTM=0.348 ipTM=0.17 tol=4.77
2024-12-08 16:49:26,063 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=71.5 pTM=0.348 ipTM=0.158 tol=4.24
2024-12-08 16:50:01,311 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=71.4 pTM=0.347 ipTM=0.16 tol=2.26
2024-12-08 16:50:36,562 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=71.6 pTM=0.347 ipTM=0.177 tol=4.16
2024-12-08 16:51:11,816 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=71.7 pTM=0.346 ipTM=0.165 tol=2.69
2024-12-08 16:51:47,059 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=71.4 pTM=0.349 ipTM=0.17 tol=2.7
2024-12-08 16:52:22,337 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=71.7 pTM=0.347 ipTM=0.172 tol=3.65
2024-12-08 16:52:57,585 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=71.6 pTM=0.346 ipTM=0.177 tol=2.51
2024-12-08 16:52:57,586 alphafold2_multimer_v3_model_5_seed_000 took 1093.0s (30 recycles)
2024-12-08 16:52:58,752 reranking models by 'multimer' metric
2024-12-08 16:53:02,456 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 16:54:23,955 Relaxation took 85.2s
2024-12-08 16:54:23,956 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=71.9 pTM=0.37 ipTM=0.206
2024-12-08 16:57:09,877 Relaxation took 165.9s
2024-12-08 16:57:09,877 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=71.4 pTM=0.365 ipTM=0.194
2024-12-08 16:59:02,841 Relaxation took 113.0s
2024-12-08 16:59:02,841 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=71.7 pTM=0.338 ipTM=0.185
2024-12-08 17:00:57,910 Relaxation took 115.1s
2024-12-08 17:00:57,910 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=71.6 pTM=0.346 ipTM=0.177
2024-12-08 17:03:22,850 Relaxation took 144.9s
2024-12-08 17:03:22,850 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=72.2 pTM=0.332 ipTM=0.153
2024-12-08 17:03:25,979 Done