2024-12-08 15:22:29,754 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 15:22:30,073 Running on GPU
2024-12-08 15:22:33,888 Found 6 citations for tools or databases
2024-12-08 15:22:33,888 Query 1/1: SPSB4_PCDH9 (length 1510)
2024-12-08 15:22:34,182 Sleeping for 10s. Reason: PENDING
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2024-12-08 15:25:51,393 Sleeping for 7s. Reason: RUNNING
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2024-12-08 15:27:02,713 Sleeping for 5s. Reason: RUNNING
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2024-12-08 15:28:43,320 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:28:51,777 Sleeping for 7s. Reason: PENDING
2024-12-08 15:28:59,196 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:29:04,454 Sleeping for 8s. Reason: RUNNING
2024-12-08 15:29:12,710 Sleeping for 7s. Reason: RUNNING
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2024-12-08 15:29:31,482 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:29:36,737 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:29:42,995 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:29:49,253 Sleeping for 5s. Reason: RUNNING
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2024-12-08 15:30:46,314 Sleeping for 10s. Reason: RUNNING
2024-12-08 15:30:56,569 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:31:02,827 Sleeping for 8s. Reason: RUNNING
2024-12-08 15:31:11,082 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:31:17,339 Sleeping for 8s. Reason: RUNNING
2024-12-08 15:31:25,604 Sleeping for 9s. Reason: RUNNING
2024-12-08 15:31:34,862 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:31:41,129 Sleeping for 7s. Reason: RUNNING
2024-12-08 15:31:48,382 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:31:53,642 Sleeping for 9s. Reason: RUNNING
2024-12-08 15:32:07,809 Setting max_seq=508, max_extra_seq=2048
2024-12-08 15:35:44,464 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=64 pTM=0.357 ipTM=0.249
2024-12-08 15:36:50,744 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=64.3 pTM=0.358 ipTM=0.261 tol=11.8
2024-12-08 15:37:57,129 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=64.2 pTM=0.361 ipTM=0.275 tol=11.5
2024-12-08 15:39:03,615 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=64.2 pTM=0.36 ipTM=0.253 tol=7.95
2024-12-08 15:40:10,161 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=64.6 pTM=0.362 ipTM=0.252 tol=7.63
2024-12-08 15:41:16,741 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=64.4 pTM=0.359 ipTM=0.253 tol=5.5
2024-12-08 15:42:23,321 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=64.6 pTM=0.357 ipTM=0.26 tol=6.73
2024-12-08 15:43:29,897 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=64.5 pTM=0.356 ipTM=0.251 tol=6.7
2024-12-08 15:44:36,454 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64.9 pTM=0.363 ipTM=0.245 tol=6.9
2024-12-08 15:45:43,027 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64.4 pTM=0.356 ipTM=0.237 tol=6.32
2024-12-08 15:46:49,615 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=64.7 pTM=0.361 ipTM=0.249 tol=7.19
2024-12-08 15:47:56,161 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=64.6 pTM=0.362 ipTM=0.245 tol=7.96
2024-12-08 15:49:02,714 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=64.6 pTM=0.358 ipTM=0.246 tol=4.71
2024-12-08 15:50:09,291 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=64.6 pTM=0.356 ipTM=0.238 tol=8.09
2024-12-08 15:51:15,854 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=64.8 pTM=0.361 ipTM=0.243 tol=5.12
2024-12-08 15:52:22,432 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=64.6 pTM=0.363 ipTM=0.236 tol=4.48
2024-12-08 15:53:29,013 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=64.7 pTM=0.361 ipTM=0.232 tol=3.93
2024-12-08 15:54:35,577 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=64.6 pTM=0.36 ipTM=0.229 tol=5.79
2024-12-08 15:55:42,144 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.5 pTM=0.356 ipTM=0.239 tol=6.52
2024-12-08 15:56:48,705 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=64.5 pTM=0.358 ipTM=0.235 tol=7.78
2024-12-08 15:57:55,255 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=64.6 pTM=0.357 ipTM=0.243 tol=2.95
2024-12-08 15:59:01,835 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64.6 pTM=0.36 ipTM=0.243 tol=5.54
2024-12-08 16:00:08,410 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64.4 pTM=0.355 ipTM=0.236 tol=5.16
2024-12-08 16:01:14,982 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=64.4 pTM=0.354 ipTM=0.232 tol=10.8
2024-12-08 16:02:21,561 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=64.4 pTM=0.356 ipTM=0.232 tol=7.8
2024-12-08 16:03:28,121 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.6 pTM=0.359 ipTM=0.229 tol=4.82
2024-12-08 16:04:34,671 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=64.5 pTM=0.357 ipTM=0.24 tol=5.43
2024-12-08 16:05:41,235 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=64.6 pTM=0.357 ipTM=0.239 tol=6.34
2024-12-08 16:06:47,848 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=64.7 pTM=0.36 ipTM=0.237 tol=4.24
2024-12-08 16:07:54,433 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=64.7 pTM=0.361 ipTM=0.236 tol=4.89
2024-12-08 16:09:00,993 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=64.5 pTM=0.36 ipTM=0.245 tol=5.08
2024-12-08 16:09:00,994 alphafold2_multimer_v3_model_1_seed_000 took 2208.4s (30 recycles)
2024-12-08 16:10:08,844 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=63.8 pTM=0.389 ipTM=0.257
2024-12-08 16:11:15,488 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=64 pTM=0.377 ipTM=0.198 tol=15.7
2024-12-08 16:12:22,218 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=64.4 pTM=0.362 ipTM=0.19 tol=19.7
2024-12-08 16:13:28,972 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=64.8 pTM=0.379 ipTM=0.196 tol=16.6
2024-12-08 16:14:35,714 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=64.8 pTM=0.38 ipTM=0.2 tol=7.56
2024-12-08 16:15:42,474 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=64.8 pTM=0.379 ipTM=0.201 tol=6.46
2024-12-08 16:16:49,245 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=64.6 pTM=0.372 ipTM=0.198 tol=3.67
2024-12-08 16:17:55,995 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=64.8 pTM=0.369 ipTM=0.195 tol=7.19
2024-12-08 16:19:02,705 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=64.8 pTM=0.374 ipTM=0.194 tol=5.24
2024-12-08 16:20:09,417 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=64.8 pTM=0.371 ipTM=0.196 tol=7.34
2024-12-08 16:21:16,090 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=64.7 pTM=0.377 ipTM=0.197 tol=7.17
2024-12-08 16:22:22,825 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=64.5 pTM=0.373 ipTM=0.197 tol=5.28
2024-12-08 16:23:29,584 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=64.6 pTM=0.372 ipTM=0.194 tol=9.41
2024-12-08 16:24:36,371 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=64.8 pTM=0.365 ipTM=0.198 tol=7.46
2024-12-08 16:25:43,133 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=64.8 pTM=0.374 ipTM=0.195 tol=8.05
2024-12-08 16:26:49,876 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=64.8 pTM=0.373 ipTM=0.197 tol=5.75
2024-12-08 16:27:56,577 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=65 pTM=0.377 ipTM=0.2 tol=2.43
2024-12-08 16:29:03,330 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=64.9 pTM=0.381 ipTM=0.198 tol=6.03
2024-12-08 16:30:10,042 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=64.6 pTM=0.373 ipTM=0.195 tol=6.9
2024-12-08 16:31:16,716 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=64.6 pTM=0.372 ipTM=0.194 tol=3.62
2024-12-08 16:32:23,384 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=64.8 pTM=0.371 ipTM=0.198 tol=7.38
2024-12-08 16:33:30,008 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=64.7 pTM=0.374 ipTM=0.195 tol=7.01
2024-12-08 16:34:36,635 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=64.4 pTM=0.372 ipTM=0.197 tol=3.5
2024-12-08 16:35:43,275 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=64.4 pTM=0.371 ipTM=0.198 tol=6.03
2024-12-08 16:36:49,948 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=64.5 pTM=0.372 ipTM=0.198 tol=6.17
2024-12-08 16:37:56,639 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=64.6 pTM=0.378 ipTM=0.192 tol=5.34
2024-12-08 16:39:03,274 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=64.7 pTM=0.374 ipTM=0.194 tol=6.73
2024-12-08 16:40:09,887 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=64.9 pTM=0.372 ipTM=0.201 tol=8.1
2024-12-08 16:41:16,590 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=64.8 pTM=0.377 ipTM=0.195 tol=9.27
2024-12-08 16:42:23,343 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=64.8 pTM=0.372 ipTM=0.203 tol=8.34
2024-12-08 16:43:30,042 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=64.6 pTM=0.375 ipTM=0.199 tol=14.6
2024-12-08 16:43:30,044 alphafold2_multimer_v3_model_2_seed_000 took 2067.7s (30 recycles)
2024-12-08 16:44:38,177 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=62.5 pTM=0.348 ipTM=0.261
2024-12-08 16:45:44,896 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=62.9 pTM=0.371 ipTM=0.288 tol=19.8
2024-12-08 16:46:51,646 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=63.1 pTM=0.374 ipTM=0.293 tol=8.05
2024-12-08 16:47:58,384 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=63.2 pTM=0.374 ipTM=0.272 tol=5.12
2024-12-08 16:49:05,113 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=63.3 pTM=0.375 ipTM=0.269 tol=4.05
2024-12-08 16:50:11,888 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=63.2 pTM=0.373 ipTM=0.273 tol=3.54
2024-12-08 16:51:18,649 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=63.2 pTM=0.374 ipTM=0.278 tol=2.9
2024-12-08 16:52:25,452 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=63.3 pTM=0.373 ipTM=0.273 tol=8.13
2024-12-08 16:53:32,266 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=63.4 pTM=0.376 ipTM=0.267 tol=8.9
2024-12-08 16:54:39,099 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=63.3 pTM=0.373 ipTM=0.28 tol=2.77
2024-12-08 16:55:45,953 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=63.2 pTM=0.374 ipTM=0.284 tol=6.39
2024-12-08 16:56:52,745 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=63.3 pTM=0.373 ipTM=0.267 tol=6.04
2024-12-08 16:57:59,507 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=63.2 pTM=0.375 ipTM=0.262 tol=3.47
2024-12-08 16:59:06,323 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=63.3 pTM=0.373 ipTM=0.27 tol=2.58
2024-12-08 17:00:13,102 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=63.2 pTM=0.375 ipTM=0.269 tol=2.1
2024-12-08 17:01:19,880 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=63.2 pTM=0.379 ipTM=0.251 tol=2.5
2024-12-08 17:02:26,664 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=63.4 pTM=0.378 ipTM=0.259 tol=2.35
2024-12-08 17:03:33,456 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=63.2 pTM=0.376 ipTM=0.272 tol=2.38
2024-12-08 17:04:40,269 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=63.3 pTM=0.373 ipTM=0.26 tol=2.95
2024-12-08 17:05:47,076 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=63.2 pTM=0.371 ipTM=0.267 tol=2.26
2024-12-08 17:06:53,907 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=63.3 pTM=0.372 ipTM=0.264 tol=8.99
2024-12-08 17:08:00,698 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=63.2 pTM=0.371 ipTM=0.257 tol=8.19
2024-12-08 17:09:07,483 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=63.2 pTM=0.371 ipTM=0.258 tol=3.16
2024-12-08 17:10:14,273 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=63.3 pTM=0.373 ipTM=0.251 tol=2.2
2024-12-08 17:11:21,078 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=63.3 pTM=0.373 ipTM=0.247 tol=2.52
2024-12-08 17:12:27,912 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=63.5 pTM=0.372 ipTM=0.273 tol=2.74
2024-12-08 17:13:34,789 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=63.5 pTM=0.373 ipTM=0.273 tol=3.09
2024-12-08 17:14:41,673 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=63.5 pTM=0.372 ipTM=0.259 tol=2.14
2024-12-08 17:15:48,561 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=63.5 pTM=0.37 ipTM=0.265 tol=3.06
2024-12-08 17:16:55,424 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=63.5 pTM=0.371 ipTM=0.257 tol=3.59
2024-12-08 17:18:02,271 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=63.6 pTM=0.375 ipTM=0.264 tol=3.64
2024-12-08 17:18:02,272 alphafold2_multimer_v3_model_3_seed_000 took 2070.9s (30 recycles)
2024-12-08 17:19:10,356 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=61.9 pTM=0.344 ipTM=0.203
2024-12-08 17:20:17,093 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=62.3 pTM=0.37 ipTM=0.265 tol=23.1
2024-12-08 17:21:23,902 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=62.8 pTM=0.36 ipTM=0.252 tol=25.5
2024-12-08 17:22:30,726 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=63.5 pTM=0.362 ipTM=0.264 tol=9.75
2024-12-08 17:23:37,556 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=63.1 pTM=0.365 ipTM=0.271 tol=16.8
2024-12-08 17:24:44,256 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=63.4 pTM=0.369 ipTM=0.259 tol=33.4
2024-12-08 17:25:51,031 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=63.6 pTM=0.363 ipTM=0.299 tol=14.1
2024-12-08 17:26:57,883 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=63.1 pTM=0.359 ipTM=0.284 tol=23.6
2024-12-08 17:28:04,708 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=63.1 pTM=0.367 ipTM=0.269 tol=10.4
2024-12-08 17:29:11,522 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=62.8 pTM=0.368 ipTM=0.251 tol=8.71
2024-12-08 17:30:18,292 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=63.4 pTM=0.359 ipTM=0.253 tol=33.8
2024-12-08 17:31:25,089 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=63.3 pTM=0.361 ipTM=0.288 tol=10
2024-12-08 17:32:31,889 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=63.2 pTM=0.366 ipTM=0.264 tol=18.8
2024-12-08 17:33:38,707 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=63.1 pTM=0.366 ipTM=0.26 tol=10.4
2024-12-08 17:34:45,562 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=63.1 pTM=0.37 ipTM=0.254 tol=5.7
2024-12-08 17:35:52,390 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=63.7 pTM=0.365 ipTM=0.252 tol=23.6
2024-12-08 17:36:59,217 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=63.7 pTM=0.371 ipTM=0.325 tol=18.4
2024-12-08 17:38:06,033 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=63.3 pTM=0.368 ipTM=0.291 tol=10.2
2024-12-08 17:39:12,820 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=63.1 pTM=0.365 ipTM=0.286 tol=13.2
2024-12-08 17:40:19,562 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=63.1 pTM=0.368 ipTM=0.288 tol=11.3
2024-12-08 17:41:26,317 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=63 pTM=0.37 ipTM=0.271 tol=6.21
2024-12-08 17:42:33,044 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=63.2 pTM=0.36 ipTM=0.26 tol=33.4
2024-12-08 17:43:39,797 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=63.3 pTM=0.361 ipTM=0.263 tol=10.2
2024-12-08 17:44:46,577 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=63.1 pTM=0.364 ipTM=0.263 tol=14
2024-12-08 17:45:53,362 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=63.1 pTM=0.361 ipTM=0.254 tol=11.7
2024-12-08 17:47:00,186 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=63.2 pTM=0.364 ipTM=0.306 tol=6.53
2024-12-08 17:48:06,959 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=63 pTM=0.363 ipTM=0.294 tol=27
2024-12-08 17:49:13,734 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=63.3 pTM=0.365 ipTM=0.27 tol=6.54
2024-12-08 17:50:20,541 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=63.2 pTM=0.364 ipTM=0.279 tol=12
2024-12-08 17:51:27,340 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=63.2 pTM=0.364 ipTM=0.268 tol=12.9
2024-12-08 17:52:34,080 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=63.5 pTM=0.362 ipTM=0.295 tol=20.1
2024-12-08 17:52:34,081 alphafold2_multimer_v3_model_4_seed_000 took 2070.4s (30 recycles)
2024-12-08 17:53:42,071 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=61.7 pTM=0.348 ipTM=0.295
2024-12-08 17:54:48,715 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=62.7 pTM=0.352 ipTM=0.367 tol=13.8
2024-12-08 17:55:55,430 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=63 pTM=0.351 ipTM=0.217 tol=13.6
2024-12-08 17:57:02,115 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=63.2 pTM=0.357 ipTM=0.205 tol=9.91
2024-12-08 17:58:08,807 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=63.5 pTM=0.359 ipTM=0.199 tol=6.56
2024-12-08 17:59:15,467 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=63.2 pTM=0.363 ipTM=0.237 tol=26.8
2024-12-08 18:00:22,157 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=63 pTM=0.37 ipTM=0.245 tol=6.23
2024-12-08 18:01:28,835 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=62.9 pTM=0.364 ipTM=0.227 tol=5.3
2024-12-08 18:02:35,555 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=63.3 pTM=0.362 ipTM=0.23 tol=7.74
2024-12-08 18:03:42,281 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=63.4 pTM=0.355 ipTM=0.224 tol=13
2024-12-08 18:04:49,017 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=63.5 pTM=0.357 ipTM=0.228 tol=6.07
2024-12-08 18:05:55,732 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=63.7 pTM=0.358 ipTM=0.232 tol=7.61
2024-12-08 18:07:02,453 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=63.6 pTM=0.356 ipTM=0.232 tol=9.25
2024-12-08 18:08:09,172 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=63.6 pTM=0.355 ipTM=0.248 tol=6.87
2024-12-08 18:09:15,872 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=63.6 pTM=0.358 ipTM=0.248 tol=3.43
2024-12-08 18:10:22,594 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=63.7 pTM=0.361 ipTM=0.224 tol=2.63
2024-12-08 18:11:29,336 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=63.8 pTM=0.36 ipTM=0.223 tol=7.06
2024-12-08 18:12:36,064 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=63.8 pTM=0.358 ipTM=0.228 tol=5.49
2024-12-08 18:13:42,776 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=63.8 pTM=0.358 ipTM=0.229 tol=4.02
2024-12-08 18:14:49,509 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=63.7 pTM=0.356 ipTM=0.226 tol=4.07
2024-12-08 18:15:56,259 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=63.7 pTM=0.359 ipTM=0.217 tol=3.22
2024-12-08 18:17:02,984 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=63.6 pTM=0.356 ipTM=0.215 tol=5.4
2024-12-08 18:18:09,663 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=63.6 pTM=0.359 ipTM=0.21 tol=5.88
2024-12-08 18:19:16,305 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=63.7 pTM=0.358 ipTM=0.206 tol=2.18
2024-12-08 18:20:22,933 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=63.2 pTM=0.366 ipTM=0.267 tol=24.2
2024-12-08 18:21:29,548 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=63.1 pTM=0.371 ipTM=0.264 tol=5.17
2024-12-08 18:22:36,215 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=63 pTM=0.371 ipTM=0.246 tol=5.14
2024-12-08 18:23:42,875 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=63.1 pTM=0.368 ipTM=0.233 tol=3.74
2024-12-08 18:24:49,544 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=62.9 pTM=0.364 ipTM=0.214 tol=6.8
2024-12-08 18:25:56,226 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=63.2 pTM=0.362 ipTM=0.223 tol=5.15
2024-12-08 18:27:02,955 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=63.5 pTM=0.363 ipTM=0.231 tol=9.35
2024-12-08 18:27:02,957 alphafold2_multimer_v3_model_5_seed_000 took 2067.5s (30 recycles)
2024-12-08 18:27:04,309 reranking models by 'multimer' metric
2024-12-08 18:27:07,765 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 18:29:34,580 Relaxation took 150.3s
2024-12-08 18:29:34,580 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=63.5 pTM=0.362 ipTM=0.295
2024-12-08 18:32:10,043 Relaxation took 155.5s
2024-12-08 18:32:10,043 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=63.6 pTM=0.375 ipTM=0.264
2024-12-08 18:34:28,776 Relaxation took 138.7s
2024-12-08 18:34:28,776 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=64.5 pTM=0.36 ipTM=0.245
2024-12-08 18:37:22,139 Relaxation took 173.4s
2024-12-08 18:37:22,140 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=63.5 pTM=0.363 ipTM=0.231
2024-12-08 18:39:52,210 Relaxation took 150.1s
2024-12-08 18:39:52,210 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=64.6 pTM=0.375 ipTM=0.199
2024-12-08 18:39:55,556 Done