2024-12-08 15:22:59,578 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 15:22:59,933 Running on GPU
2024-12-08 15:23:01,138 Found 6 citations for tools or databases
2024-12-08 15:23:01,138 Query 1/1: SPSB4_PCDHGC4 (length 1211)
2024-12-08 15:23:01,402 Sleeping for 5s. Reason: PENDING
2024-12-08 15:23:06,655 Sleeping for 10s. Reason: PENDING
2024-12-08 15:23:16,916 Sleeping for 9s. Reason: PENDING
2024-12-08 15:23:26,177 Sleeping for 9s. Reason: RUNNING
2024-12-08 15:23:35,434 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:23:40,687 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:23:46,944 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:23:52,198 Sleeping for 9s. Reason: RUNNING
2024-12-08 15:24:01,469 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:24:07,723 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:24:12,980 Sleeping for 10s. Reason: RUNNING
2024-12-08 15:24:23,248 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:24:28,511 Sleeping for 7s. Reason: RUNNING
2024-12-08 15:24:35,768 Sleeping for 8s. Reason: RUNNING
2024-12-08 15:24:44,026 Sleeping for 8s. Reason: RUNNING
2024-12-08 15:24:52,285 Sleeping for 9s. Reason: RUNNING
2024-12-08 15:25:01,545 Sleeping for 8s. Reason: RUNNING
2024-12-08 15:25:09,805 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:25:16,057 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:25:21,313 Sleeping for 8s. Reason: RUNNING
2024-12-08 15:25:29,567 Sleeping for 7s. Reason: RUNNING
2024-12-08 15:25:36,827 Sleeping for 8s. Reason: RUNNING
2024-12-08 15:25:45,087 Sleeping for 10s. Reason: RUNNING
2024-12-08 15:25:55,342 Sleeping for 10s. Reason: RUNNING
2024-12-08 15:26:05,604 Sleeping for 8s. Reason: RUNNING
2024-12-08 15:26:13,866 Sleeping for 9s. Reason: RUNNING
2024-12-08 15:26:23,124 Sleeping for 10s. Reason: RUNNING
2024-12-08 15:26:33,380 Sleeping for 10s. Reason: RUNNING
2024-12-08 15:26:43,657 Sleeping for 9s. Reason: RUNNING
2024-12-08 15:26:52,915 Sleeping for 7s. Reason: RUNNING
2024-12-08 15:27:00,181 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:27:06,445 Sleeping for 9s. Reason: RUNNING
2024-12-08 15:27:15,702 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:27:20,968 Sleeping for 10s. Reason: RUNNING
2024-12-08 15:27:31,233 Sleeping for 10s. Reason: RUNNING
2024-12-08 15:27:41,489 Sleeping for 10s. Reason: RUNNING
2024-12-08 15:27:51,751 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:27:57,013 Sleeping for 9s. Reason: RUNNING
2024-12-08 15:28:08,330 Sleeping for 5s. Reason: PENDING
2024-12-08 15:28:13,586 Sleeping for 10s. Reason: RUNNING
2024-12-08 15:28:23,847 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:28:30,110 Sleeping for 7s. Reason: RUNNING
2024-12-08 15:28:37,366 Sleeping for 7s. Reason: RUNNING
2024-12-08 15:28:44,630 Sleeping for 8s. Reason: RUNNING
2024-12-08 15:28:52,888 Sleeping for 8s. Reason: RUNNING
2024-12-08 15:29:01,145 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:29:06,412 Sleeping for 10s. Reason: RUNNING
2024-12-08 15:29:16,670 Sleeping for 9s. Reason: RUNNING
2024-12-08 15:29:25,927 Sleeping for 7s. Reason: RUNNING
2024-12-08 15:29:33,199 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:29:38,455 Sleeping for 7s. Reason: RUNNING
2024-12-08 15:29:45,715 Sleeping for 7s. Reason: RUNNING
2024-12-08 15:29:52,975 Sleeping for 10s. Reason: RUNNING
2024-12-08 15:30:03,237 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:30:09,494 Sleeping for 8s. Reason: RUNNING
2024-12-08 15:30:17,748 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:30:23,002 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:30:29,260 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:30:35,516 Sleeping for 8s. Reason: RUNNING
2024-12-08 15:30:43,773 Sleeping for 10s. Reason: RUNNING
2024-12-08 15:30:59,916 Setting max_seq=508, max_extra_seq=2048
2024-12-08 15:34:57,965 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=69.2 pTM=0.373 ipTM=0.153
2024-12-08 15:35:36,744 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=69.4 pTM=0.382 ipTM=0.153 tol=17.7
2024-12-08 15:36:15,703 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=69.2 pTM=0.378 ipTM=0.154 tol=6.52
2024-12-08 15:36:54,748 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=69.3 pTM=0.381 ipTM=0.153 tol=7.1
2024-12-08 15:37:33,838 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=69.4 pTM=0.383 ipTM=0.156 tol=5.05
2024-12-08 15:38:12,965 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=69.2 pTM=0.374 ipTM=0.154 tol=5.85
2024-12-08 15:38:52,146 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=69.3 pTM=0.373 ipTM=0.154 tol=2.91
2024-12-08 15:39:31,683 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=69.3 pTM=0.373 ipTM=0.155 tol=4.73
2024-12-08 15:40:11,287 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=69.4 pTM=0.375 ipTM=0.154 tol=4.8
2024-12-08 15:40:50,726 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=69.2 pTM=0.369 ipTM=0.152 tol=1.93
2024-12-08 15:41:30,016 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=69.5 pTM=0.378 ipTM=0.152 tol=1.36
2024-12-08 15:42:09,212 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=69.3 pTM=0.375 ipTM=0.154 tol=2.96
2024-12-08 15:42:48,366 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=69.2 pTM=0.373 ipTM=0.155 tol=2.14
2024-12-08 15:43:27,525 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=69.2 pTM=0.374 ipTM=0.155 tol=1.62
2024-12-08 15:44:06,652 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=69.3 pTM=0.375 ipTM=0.154 tol=2.09
2024-12-08 15:44:45,792 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=69.2 pTM=0.376 ipTM=0.154 tol=2.03
2024-12-08 15:45:24,950 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=69.3 pTM=0.376 ipTM=0.152 tol=2.46
2024-12-08 15:46:04,105 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=69.3 pTM=0.376 ipTM=0.152 tol=2.11
2024-12-08 15:46:43,249 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=69.4 pTM=0.375 ipTM=0.152 tol=2.53
2024-12-08 15:47:22,402 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=69.4 pTM=0.375 ipTM=0.153 tol=1.65
2024-12-08 15:48:01,520 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=69.3 pTM=0.375 ipTM=0.155 tol=4.18
2024-12-08 15:48:40,662 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=69.4 pTM=0.379 ipTM=0.154 tol=2.22
2024-12-08 15:49:19,828 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=69.2 pTM=0.372 ipTM=0.153 tol=5.52
2024-12-08 15:49:58,990 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=69.2 pTM=0.374 ipTM=0.156 tol=4.7
2024-12-08 15:50:38,181 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=69.4 pTM=0.376 ipTM=0.156 tol=5.83
2024-12-08 15:51:17,396 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=69.2 pTM=0.373 ipTM=0.154 tol=6.02
2024-12-08 15:51:56,591 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=69.3 pTM=0.372 ipTM=0.153 tol=5.39
2024-12-08 15:52:35,801 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=69.5 pTM=0.376 ipTM=0.153 tol=2.92
2024-12-08 15:53:15,001 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=69.4 pTM=0.376 ipTM=0.155 tol=2.88
2024-12-08 15:53:54,214 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=69.4 pTM=0.374 ipTM=0.153 tol=2.98
2024-12-08 15:54:33,428 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=69.3 pTM=0.374 ipTM=0.156 tol=4.67
2024-12-08 15:54:33,429 alphafold2_multimer_v3_model_1_seed_000 took 1406.8s (30 recycles)
2024-12-08 15:55:13,755 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=67.4 pTM=0.375 ipTM=0.147
2024-12-08 15:55:53,009 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=68 pTM=0.388 ipTM=0.177 tol=14.9
2024-12-08 15:56:32,268 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=68.3 pTM=0.386 ipTM=0.195 tol=7.77
2024-12-08 15:57:11,547 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=69.1 pTM=0.394 ipTM=0.192 tol=4.97
2024-12-08 15:57:50,856 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=69.2 pTM=0.393 ipTM=0.188 tol=3.67
2024-12-08 15:58:30,154 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=69 pTM=0.384 ipTM=0.188 tol=3.49
2024-12-08 15:59:09,580 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=68.9 pTM=0.379 ipTM=0.182 tol=3.24
2024-12-08 15:59:48,912 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=68.8 pTM=0.383 ipTM=0.186 tol=1.69
2024-12-08 16:00:28,320 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=69.1 pTM=0.386 ipTM=0.185 tol=2.88
2024-12-08 16:01:07,667 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=69 pTM=0.38 ipTM=0.184 tol=1.76
2024-12-08 16:01:47,029 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=69.1 pTM=0.385 ipTM=0.186 tol=1.71
2024-12-08 16:02:26,373 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=69.1 pTM=0.385 ipTM=0.185 tol=2.04
2024-12-08 16:03:05,707 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=69.1 pTM=0.387 ipTM=0.187 tol=2.37
2024-12-08 16:03:45,063 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=68.9 pTM=0.384 ipTM=0.18 tol=3.59
2024-12-08 16:04:24,427 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=68.9 pTM=0.385 ipTM=0.178 tol=2.51
2024-12-08 16:05:03,908 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=69.1 pTM=0.387 ipTM=0.177 tol=4.84
2024-12-08 16:05:43,370 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=69 pTM=0.385 ipTM=0.177 tol=2.87
2024-12-08 16:06:22,805 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=69.1 pTM=0.388 ipTM=0.175 tol=3.76
2024-12-08 16:07:02,201 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=68.9 pTM=0.381 ipTM=0.181 tol=8.2
2024-12-08 16:07:41,592 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=68.9 pTM=0.383 ipTM=0.189 tol=4.64
2024-12-08 16:08:21,016 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=69.1 pTM=0.385 ipTM=0.18 tol=3.27
2024-12-08 16:09:00,366 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=69.1 pTM=0.383 ipTM=0.174 tol=4.95
2024-12-08 16:09:39,750 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=68.8 pTM=0.378 ipTM=0.173 tol=4.7
2024-12-08 16:10:19,173 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=68.9 pTM=0.38 ipTM=0.169 tol=2.18
2024-12-08 16:10:58,564 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=68.8 pTM=0.381 ipTM=0.177 tol=2.65
2024-12-08 16:11:37,910 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=68.8 pTM=0.38 ipTM=0.173 tol=3.37
2024-12-08 16:12:17,289 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=69 pTM=0.383 ipTM=0.173 tol=5.41
2024-12-08 16:12:56,648 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=69.1 pTM=0.386 ipTM=0.176 tol=6.02
2024-12-08 16:13:35,994 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=69.1 pTM=0.383 ipTM=0.174 tol=6.52
2024-12-08 16:14:15,370 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=68.9 pTM=0.381 ipTM=0.177 tol=9.41
2024-12-08 16:14:54,760 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=68.9 pTM=0.377 ipTM=0.177 tol=6.91
2024-12-08 16:14:54,761 alphafold2_multimer_v3_model_2_seed_000 took 1220.2s (30 recycles)
2024-12-08 16:15:35,220 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=67.4 pTM=0.383 ipTM=0.18
2024-12-08 16:16:14,610 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=67.8 pTM=0.396 ipTM=0.176 tol=12.8
2024-12-08 16:16:54,002 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=67.6 pTM=0.395 ipTM=0.178 tol=6.72
2024-12-08 16:17:33,386 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=67.4 pTM=0.39 ipTM=0.171 tol=10.9
2024-12-08 16:18:12,722 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=66.9 pTM=0.399 ipTM=0.187 tol=16.7
2024-12-08 16:18:52,044 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=67.1 pTM=0.394 ipTM=0.196 tol=7.07
2024-12-08 16:19:31,366 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=67 pTM=0.394 ipTM=0.203 tol=3.41
2024-12-08 16:20:10,676 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=67.1 pTM=0.395 ipTM=0.207 tol=3.38
2024-12-08 16:20:50,002 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=67 pTM=0.397 ipTM=0.212 tol=2.22
2024-12-08 16:21:29,319 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=66.9 pTM=0.395 ipTM=0.209 tol=2.32
2024-12-08 16:22:08,629 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=66.9 pTM=0.398 ipTM=0.215 tol=1.63
2024-12-08 16:22:47,932 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=66.9 pTM=0.396 ipTM=0.214 tol=2.25
2024-12-08 16:23:27,234 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=66.8 pTM=0.399 ipTM=0.216 tol=2.24
2024-12-08 16:24:06,544 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=66.9 pTM=0.397 ipTM=0.219 tol=1.86
2024-12-08 16:24:45,855 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=66.9 pTM=0.398 ipTM=0.214 tol=2.62
2024-12-08 16:25:25,152 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=66.9 pTM=0.4 ipTM=0.216 tol=1.78
2024-12-08 16:26:04,472 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=67 pTM=0.402 ipTM=0.216 tol=1.34
2024-12-08 16:26:43,790 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=66.8 pTM=0.399 ipTM=0.218 tol=1.86
2024-12-08 16:27:23,096 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=66.9 pTM=0.398 ipTM=0.215 tol=1.65
2024-12-08 16:28:02,419 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=66.9 pTM=0.396 ipTM=0.214 tol=1.95
2024-12-08 16:28:41,731 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=66.9 pTM=0.399 ipTM=0.22 tol=1.98
2024-12-08 16:29:21,040 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.1 pTM=0.399 ipTM=0.34 tol=2.7
2024-12-08 16:30:00,340 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=67.1 pTM=0.397 ipTM=0.525 tol=4.79
2024-12-08 16:30:39,622 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.1 pTM=0.4 ipTM=0.459 tol=2.65
2024-12-08 16:31:18,919 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=67.1 pTM=0.398 ipTM=0.464 tol=4.18
2024-12-08 16:31:58,197 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67.1 pTM=0.397 ipTM=0.517 tol=4.63
2024-12-08 16:32:37,482 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=67.1 pTM=0.396 ipTM=0.485 tol=1.98
2024-12-08 16:33:16,764 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.2 pTM=0.4 ipTM=0.499 tol=2.01
2024-12-08 16:33:56,056 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=67.1 pTM=0.399 ipTM=0.494 tol=1.87
2024-12-08 16:34:35,333 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.2 pTM=0.4 ipTM=0.508 tol=2.24
2024-12-08 16:35:14,603 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.1 pTM=0.401 ipTM=0.475 tol=2.36
2024-12-08 16:35:14,604 alphafold2_multimer_v3_model_3_seed_000 took 1218.7s (30 recycles)
2024-12-08 16:35:54,909 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=65.8 pTM=0.396 ipTM=0.243
2024-12-08 16:36:34,179 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=67.2 pTM=0.404 ipTM=0.191 tol=30.1
2024-12-08 16:37:13,576 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=67.2 pTM=0.395 ipTM=0.149 tol=14.2
2024-12-08 16:37:52,939 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=67.2 pTM=0.401 ipTM=0.17 tol=12.7
2024-12-08 16:38:32,267 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=67.3 pTM=0.415 ipTM=0.196 tol=9.05
2024-12-08 16:39:11,588 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=67.2 pTM=0.414 ipTM=0.208 tol=5.29
2024-12-08 16:39:50,956 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=67.2 pTM=0.412 ipTM=0.196 tol=5.9
2024-12-08 16:40:30,327 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=67.1 pTM=0.413 ipTM=0.21 tol=5.41
2024-12-08 16:41:09,718 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=67.2 pTM=0.413 ipTM=0.199 tol=4.49
2024-12-08 16:41:49,091 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=67.1 pTM=0.411 ipTM=0.205 tol=5.45
2024-12-08 16:42:28,431 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=67.4 pTM=0.416 ipTM=0.2 tol=4.69
2024-12-08 16:43:07,751 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=67.3 pTM=0.416 ipTM=0.213 tol=5.49
2024-12-08 16:43:47,097 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=67.2 pTM=0.416 ipTM=0.204 tol=2.8
2024-12-08 16:44:26,449 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=67.4 pTM=0.413 ipTM=0.205 tol=3.74
2024-12-08 16:45:05,797 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=67.4 pTM=0.417 ipTM=0.207 tol=3.13
2024-12-08 16:45:45,133 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=67.4 pTM=0.421 ipTM=0.207 tol=2.57
2024-12-08 16:46:24,453 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=67.4 pTM=0.42 ipTM=0.201 tol=3.11
2024-12-08 16:47:03,766 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=67.6 pTM=0.424 ipTM=0.212 tol=4.65
2024-12-08 16:47:43,098 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=67.2 pTM=0.416 ipTM=0.205 tol=6.1
2024-12-08 16:48:22,436 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=67.2 pTM=0.412 ipTM=0.197 tol=5.34
2024-12-08 16:49:01,801 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=67.4 pTM=0.415 ipTM=0.199 tol=3.92
2024-12-08 16:49:41,152 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=67.6 pTM=0.42 ipTM=0.212 tol=5.2
2024-12-08 16:50:20,536 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=67.1 pTM=0.413 ipTM=0.201 tol=5.97
2024-12-08 16:50:59,897 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=67.2 pTM=0.417 ipTM=0.21 tol=4.38
2024-12-08 16:51:39,243 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=67 pTM=0.414 ipTM=0.208 tol=1.64
2024-12-08 16:52:18,612 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=67.1 pTM=0.413 ipTM=0.204 tol=3.15
2024-12-08 16:52:57,982 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=67.1 pTM=0.411 ipTM=0.204 tol=3.13
2024-12-08 16:53:37,346 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=67.4 pTM=0.416 ipTM=0.203 tol=3.27
2024-12-08 16:54:16,697 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=66.6 pTM=0.416 ipTM=0.209 tol=6.12
2024-12-08 16:54:56,046 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=67.2 pTM=0.415 ipTM=0.202 tol=6.48
2024-12-08 16:55:35,382 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=67.2 pTM=0.418 ipTM=0.214 tol=6.2
2024-12-08 16:55:35,383 alphafold2_multimer_v3_model_4_seed_000 took 1219.7s (30 recycles)
2024-12-08 16:56:15,846 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=65.8 pTM=0.37 ipTM=0.158
2024-12-08 16:56:55,209 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=67.1 pTM=0.386 ipTM=0.168 tol=13.1
2024-12-08 16:57:34,586 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=67.5 pTM=0.393 ipTM=0.164 tol=7.36
2024-12-08 16:58:13,983 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=67.7 pTM=0.388 ipTM=0.162 tol=5.13
2024-12-08 16:58:53,390 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=67.9 pTM=0.387 ipTM=0.156 tol=4.96
2024-12-08 16:59:32,775 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=67.8 pTM=0.387 ipTM=0.155 tol=3.39
2024-12-08 17:00:12,160 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=67.8 pTM=0.381 ipTM=0.152 tol=3.65
2024-12-08 17:00:51,558 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=67.9 pTM=0.382 ipTM=0.153 tol=4.5
2024-12-08 17:01:30,876 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=67.8 pTM=0.381 ipTM=0.15 tol=6.48
2024-12-08 17:02:10,149 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67.8 pTM=0.379 ipTM=0.147 tol=4.11
2024-12-08 17:02:49,496 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=67.9 pTM=0.381 ipTM=0.146 tol=5.25
2024-12-08 17:03:28,767 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67.9 pTM=0.38 ipTM=0.148 tol=4.59
2024-12-08 17:04:08,038 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=67.8 pTM=0.383 ipTM=0.151 tol=5.53
2024-12-08 17:04:47,297 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=67.8 pTM=0.381 ipTM=0.151 tol=5.1
2024-12-08 17:05:26,570 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=67.8 pTM=0.383 ipTM=0.156 tol=6
2024-12-08 17:06:05,854 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.9 pTM=0.384 ipTM=0.155 tol=3.29
2024-12-08 17:06:45,169 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67.8 pTM=0.383 ipTM=0.154 tol=4.71
2024-12-08 17:07:24,502 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=67.8 pTM=0.382 ipTM=0.154 tol=3.14
2024-12-08 17:08:03,834 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=67.8 pTM=0.381 ipTM=0.156 tol=6.07
2024-12-08 17:08:43,176 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=67.8 pTM=0.382 ipTM=0.155 tol=1.53
2024-12-08 17:09:22,541 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=67.9 pTM=0.384 ipTM=0.157 tol=5.26
2024-12-08 17:10:01,940 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=67.9 pTM=0.387 ipTM=0.158 tol=3.31
2024-12-08 17:10:41,355 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=67.6 pTM=0.38 ipTM=0.154 tol=6.92
2024-12-08 17:11:20,759 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=67.9 pTM=0.386 ipTM=0.159 tol=5.11
2024-12-08 17:12:00,151 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=67.8 pTM=0.387 ipTM=0.162 tol=5.44
2024-12-08 17:12:39,560 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=67.6 pTM=0.384 ipTM=0.159 tol=3.52
2024-12-08 17:13:18,958 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=67.9 pTM=0.385 ipTM=0.157 tol=5.04
2024-12-08 17:13:58,346 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=68 pTM=0.385 ipTM=0.156 tol=3.22
2024-12-08 17:14:37,760 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=67.9 pTM=0.384 ipTM=0.156 tol=1.88
2024-12-08 17:15:17,162 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=67.9 pTM=0.386 ipTM=0.156 tol=1.96
2024-12-08 17:15:56,568 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=67.9 pTM=0.387 ipTM=0.159 tol=2.32
2024-12-08 17:15:56,569 alphafold2_multimer_v3_model_5_seed_000 took 1220.1s (30 recycles)
2024-12-08 17:15:57,692 reranking models by 'multimer' metric
2024-12-08 17:16:00,440 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 17:17:58,367 Relaxation took 120.7s
2024-12-08 17:17:58,367 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.1 pTM=0.401 ipTM=0.475
2024-12-08 17:19:47,301 Relaxation took 108.9s
2024-12-08 17:19:47,301 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=67.2 pTM=0.418 ipTM=0.214
2024-12-08 17:22:28,166 Relaxation took 160.9s
2024-12-08 17:22:28,166 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=68.9 pTM=0.377 ipTM=0.177
2024-12-08 17:23:44,689 Relaxation took 76.5s
2024-12-08 17:23:44,689 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67.9 pTM=0.387 ipTM=0.159
2024-12-08 17:25:20,463 Relaxation took 95.8s
2024-12-08 17:25:20,463 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=69.3 pTM=0.374 ipTM=0.156
2024-12-08 17:25:23,303 Done