2024-12-08 15:49:16,850 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 15:49:17,174 Running on GPU
2024-12-08 15:49:20,868 Found 6 citations for tools or databases
2024-12-08 15:49:20,868 Query 1/1: SPSB4_PPP1R13B (length 1363)
2024-12-08 15:49:21,177 Sleeping for 9s. Reason: PENDING
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2024-12-08 15:50:06,471 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:50:12,722 Sleeping for 10s. Reason: RUNNING
2024-12-08 15:50:22,981 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:50:28,234 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:50:33,489 Sleeping for 8s. Reason: RUNNING
2024-12-08 15:50:41,748 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:50:48,005 Sleeping for 9s. Reason: RUNNING
2024-12-08 15:50:57,260 Sleeping for 7s. Reason: RUNNING
2024-12-08 15:51:04,518 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:51:09,770 Sleeping for 8s. Reason: RUNNING
2024-12-08 15:51:18,029 Sleeping for 7s. Reason: RUNNING
2024-12-08 15:51:25,287 Sleeping for 10s. Reason: RUNNING
2024-12-08 15:51:35,556 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:51:41,820 Sleeping for 9s. Reason: RUNNING
2024-12-08 15:51:51,082 Sleeping for 8s. Reason: RUNNING
2024-12-08 15:51:59,339 Sleeping for 7s. Reason: RUNNING
2024-12-08 15:52:06,593 Sleeping for 8s. Reason: RUNNING
2024-12-08 15:52:16,410 Sleeping for 8s. Reason: PENDING
2024-12-08 15:52:24,667 Sleeping for 6s. Reason: PENDING
2024-12-08 15:52:30,925 Sleeping for 9s. Reason: RUNNING
2024-12-08 15:52:40,185 Sleeping for 9s. Reason: RUNNING
2024-12-08 15:52:49,438 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:52:54,695 Sleeping for 7s. Reason: RUNNING
2024-12-08 15:53:01,958 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:53:08,218 Sleeping for 10s. Reason: RUNNING
2024-12-08 15:53:18,482 Sleeping for 8s. Reason: RUNNING
2024-12-08 15:53:26,739 Sleeping for 8s. Reason: RUNNING
2024-12-08 15:53:35,001 Sleeping for 5s. Reason: RUNNING
2024-12-08 15:53:40,254 Sleeping for 8s. Reason: RUNNING
2024-12-08 15:53:48,516 Sleeping for 8s. Reason: RUNNING
2024-12-08 15:53:56,777 Sleeping for 7s. Reason: RUNNING
2024-12-08 15:54:04,029 Sleeping for 10s. Reason: RUNNING
2024-12-08 15:54:14,283 Sleeping for 6s. Reason: RUNNING
2024-12-08 15:54:20,545 Sleeping for 10s. Reason: RUNNING
2024-12-08 15:54:34,445 Setting max_seq=508, max_extra_seq=2048
2024-12-08 15:58:03,548 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=47.4 pTM=0.288 ipTM=0.215
2024-12-08 15:58:53,733 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=46.6 pTM=0.302 ipTM=0.276 tol=22.2
2024-12-08 15:59:44,020 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=46.6 pTM=0.303 ipTM=0.292 tol=9.59
2024-12-08 16:00:34,347 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=47.2 pTM=0.309 ipTM=0.323 tol=6.93
2024-12-08 16:01:24,761 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=46.8 pTM=0.304 ipTM=0.313 tol=6.98
2024-12-08 16:02:15,204 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=47 pTM=0.309 ipTM=0.332 tol=5.86
2024-12-08 16:03:05,706 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=47.3 pTM=0.304 ipTM=0.316 tol=5.87
2024-12-08 16:03:56,197 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=47.5 pTM=0.31 ipTM=0.333 tol=7.43
2024-12-08 16:04:46,713 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=47.5 pTM=0.305 ipTM=0.317 tol=9.17
2024-12-08 16:05:37,215 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=47.7 pTM=0.315 ipTM=0.342 tol=10
2024-12-08 16:06:27,709 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=47.6 pTM=0.31 ipTM=0.324 tol=4.59
2024-12-08 16:07:18,199 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=47.8 pTM=0.312 ipTM=0.337 tol=4.76
2024-12-08 16:08:08,703 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=47.3 pTM=0.309 ipTM=0.326 tol=9.73
2024-12-08 16:08:59,139 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=47.7 pTM=0.315 ipTM=0.345 tol=7.96
2024-12-08 16:09:49,589 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=47.7 pTM=0.309 ipTM=0.323 tol=3.68
2024-12-08 16:10:40,044 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=47.8 pTM=0.315 ipTM=0.349 tol=4.27
2024-12-08 16:11:30,533 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=47.9 pTM=0.31 ipTM=0.322 tol=8.01
2024-12-08 16:12:21,006 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=47.8 pTM=0.312 ipTM=0.334 tol=7.54
2024-12-08 16:13:11,464 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=47.8 pTM=0.309 ipTM=0.319 tol=2.86
2024-12-08 16:14:01,946 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=47.8 pTM=0.314 ipTM=0.343 tol=3.52
2024-12-08 16:14:52,435 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=47.8 pTM=0.311 ipTM=0.324 tol=3.79
2024-12-08 16:15:42,915 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=47.6 pTM=0.314 ipTM=0.342 tol=3.62
2024-12-08 16:16:33,411 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=47.7 pTM=0.31 ipTM=0.321 tol=2.32
2024-12-08 16:17:23,878 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=48 pTM=0.315 ipTM=0.344 tol=5.24
2024-12-08 16:18:14,327 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=47.8 pTM=0.309 ipTM=0.312 tol=4.51
2024-12-08 16:19:04,767 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=47.7 pTM=0.313 ipTM=0.341 tol=4.11
2024-12-08 16:19:55,219 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=47.6 pTM=0.311 ipTM=0.333 tol=3.39
2024-12-08 16:20:45,662 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=47.7 pTM=0.314 ipTM=0.344 tol=4.97
2024-12-08 16:21:36,097 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=47.7 pTM=0.31 ipTM=0.32 tol=10.7
2024-12-08 16:22:26,519 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=47.8 pTM=0.313 ipTM=0.342 tol=9.56
2024-12-08 16:23:16,959 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=47.6 pTM=0.31 ipTM=0.323 tol=8.61
2024-12-08 16:23:16,961 alphafold2_multimer_v3_model_1_seed_000 took 1717.2s (30 recycles)
2024-12-08 16:24:08,481 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=47.5 pTM=0.301 ipTM=0.273
2024-12-08 16:24:58,893 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=48.8 pTM=0.346 ipTM=0.466 tol=19.4
2024-12-08 16:25:49,340 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=48.5 pTM=0.309 ipTM=0.297 tol=11.4
2024-12-08 16:26:39,819 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=48.7 pTM=0.316 ipTM=0.338 tol=7.81
2024-12-08 16:27:30,300 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=48.7 pTM=0.311 ipTM=0.318 tol=9.88
2024-12-08 16:28:20,775 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=48.7 pTM=0.312 ipTM=0.331 tol=7.44
2024-12-08 16:29:11,262 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=49 pTM=0.307 ipTM=0.316 tol=9.23
2024-12-08 16:30:01,727 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=49.1 pTM=0.312 ipTM=0.334 tol=7.99
2024-12-08 16:30:52,246 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=49.1 pTM=0.31 ipTM=0.336 tol=9.48
2024-12-08 16:31:42,755 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=49 pTM=0.311 ipTM=0.34 tol=8.25
2024-12-08 16:32:33,236 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=49.1 pTM=0.314 ipTM=0.329 tol=14.9
2024-12-08 16:33:23,716 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=49 pTM=0.319 ipTM=0.334 tol=9.16
2024-12-08 16:34:14,198 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=49.1 pTM=0.318 ipTM=0.328 tol=8.62
2024-12-08 16:35:04,685 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=49.3 pTM=0.319 ipTM=0.335 tol=8.39
2024-12-08 16:35:55,207 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=48.9 pTM=0.316 ipTM=0.319 tol=8.85
2024-12-08 16:36:45,708 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=49.2 pTM=0.324 ipTM=0.34 tol=7.25
2024-12-08 16:37:36,202 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=49.2 pTM=0.322 ipTM=0.325 tol=8.42
2024-12-08 16:38:26,680 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=49.1 pTM=0.325 ipTM=0.329 tol=7.56
2024-12-08 16:39:17,134 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=49.2 pTM=0.322 ipTM=0.312 tol=8.27
2024-12-08 16:40:07,596 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=49.3 pTM=0.325 ipTM=0.328 tol=7.23
2024-12-08 16:40:58,072 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=49.2 pTM=0.326 ipTM=0.341 tol=7.68
2024-12-08 16:41:48,555 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=49.1 pTM=0.329 ipTM=0.343 tol=10.2
2024-12-08 16:42:39,005 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=49.3 pTM=0.327 ipTM=0.325 tol=9.82
2024-12-08 16:43:29,471 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=49.4 pTM=0.33 ipTM=0.332 tol=6.7
2024-12-08 16:44:19,947 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=49.3 pTM=0.324 ipTM=0.313 tol=4.58
2024-12-08 16:45:10,420 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=49.3 pTM=0.328 ipTM=0.332 tol=9.16
2024-12-08 16:46:00,915 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=49.2 pTM=0.328 ipTM=0.342 tol=9.51
2024-12-08 16:46:51,429 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=49.1 pTM=0.325 ipTM=0.336 tol=7.9
2024-12-08 16:47:41,954 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=49.4 pTM=0.323 ipTM=0.325 tol=7.96
2024-12-08 16:48:32,446 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=49.3 pTM=0.327 ipTM=0.338 tol=6.25
2024-12-08 16:49:22,956 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=49.3 pTM=0.325 ipTM=0.333 tol=6.4
2024-12-08 16:49:22,957 alphafold2_multimer_v3_model_2_seed_000 took 1564.9s (30 recycles)
2024-12-08 16:50:14,732 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=47.8 pTM=0.309 ipTM=0.331
2024-12-08 16:51:05,378 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=47 pTM=0.297 ipTM=0.267 tol=19.4
2024-12-08 16:51:56,053 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=47.4 pTM=0.3 ipTM=0.266 tol=13
2024-12-08 16:52:46,744 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=47.5 pTM=0.294 ipTM=0.24 tol=9.3
2024-12-08 16:53:37,468 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=47.6 pTM=0.298 ipTM=0.249 tol=8.26
2024-12-08 16:54:28,227 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=47.7 pTM=0.301 ipTM=0.281 tol=7.11
2024-12-08 16:55:18,984 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=47.8 pTM=0.298 ipTM=0.261 tol=5.85
2024-12-08 16:56:09,733 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=47.8 pTM=0.296 ipTM=0.249 tol=5.57
2024-12-08 16:57:00,489 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=47.8 pTM=0.301 ipTM=0.273 tol=4.67
2024-12-08 16:57:51,235 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=47.7 pTM=0.296 ipTM=0.253 tol=3.44
2024-12-08 16:58:41,984 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=47.6 pTM=0.297 ipTM=0.246 tol=6.07
2024-12-08 16:59:32,743 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=47.5 pTM=0.298 ipTM=0.256 tol=8.88
2024-12-08 17:00:23,525 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=47.2 pTM=0.299 ipTM=0.26 tol=5.62
2024-12-08 17:01:14,292 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=47.4 pTM=0.302 ipTM=0.282 tol=5.78
2024-12-08 17:02:05,069 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=47.4 pTM=0.296 ipTM=0.247 tol=4.98
2024-12-08 17:02:55,800 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=47.7 pTM=0.301 ipTM=0.26 tol=8.68
2024-12-08 17:03:46,474 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=47.4 pTM=0.303 ipTM=0.263 tol=9.09
2024-12-08 17:04:37,098 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=47.7 pTM=0.302 ipTM=0.253 tol=7.53
2024-12-08 17:05:27,744 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=47.4 pTM=0.298 ipTM=0.233 tol=6
2024-12-08 17:06:18,391 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=47.8 pTM=0.302 ipTM=0.26 tol=5.22
2024-12-08 17:07:09,052 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=47.7 pTM=0.302 ipTM=0.268 tol=4.02
2024-12-08 17:07:59,697 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=47.4 pTM=0.299 ipTM=0.247 tol=3.83
2024-12-08 17:08:50,340 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=47.6 pTM=0.3 ipTM=0.25 tol=3.37
2024-12-08 17:09:41,003 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=47.8 pTM=0.3 ipTM=0.254 tol=2.26
2024-12-08 17:10:31,662 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=47.6 pTM=0.302 ipTM=0.255 tol=2.87
2024-12-08 17:11:22,309 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=47.5 pTM=0.301 ipTM=0.255 tol=6.78
2024-12-08 17:12:12,968 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=47.8 pTM=0.305 ipTM=0.28 tol=4.86
2024-12-08 17:13:03,641 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=47.6 pTM=0.298 ipTM=0.245 tol=4.09
2024-12-08 17:13:54,335 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=47.7 pTM=0.304 ipTM=0.27 tol=3.59
2024-12-08 17:14:45,045 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=47.6 pTM=0.304 ipTM=0.279 tol=3.91
2024-12-08 17:15:35,773 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=47.8 pTM=0.301 ipTM=0.259 tol=3.62
2024-12-08 17:15:35,775 alphafold2_multimer_v3_model_3_seed_000 took 1571.7s (30 recycles)
2024-12-08 17:16:27,469 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=44.8 pTM=0.333 ipTM=0.491
2024-12-08 17:17:18,136 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=44 pTM=0.376 ipTM=0.68 tol=26
2024-12-08 17:18:08,802 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=44.6 pTM=0.304 ipTM=0.303 tol=17
2024-12-08 17:18:59,496 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=44.9 pTM=0.302 ipTM=0.281 tol=12.9
2024-12-08 17:19:50,179 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=45 pTM=0.306 ipTM=0.279 tol=15.1
2024-12-08 17:20:40,813 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=45 pTM=0.311 ipTM=0.29 tol=9.46
2024-12-08 17:21:31,435 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=45.2 pTM=0.312 ipTM=0.277 tol=6.5
2024-12-08 17:22:22,023 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=45.7 pTM=0.318 ipTM=0.272 tol=6.88
2024-12-08 17:23:12,645 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=45.6 pTM=0.32 ipTM=0.288 tol=9.5
2024-12-08 17:24:03,282 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=45.7 pTM=0.318 ipTM=0.271 tol=9.4
2024-12-08 17:24:53,944 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=45.8 pTM=0.317 ipTM=0.269 tol=8.01
2024-12-08 17:25:44,589 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=45.7 pTM=0.325 ipTM=0.294 tol=8.7
2024-12-08 17:26:35,243 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=45.7 pTM=0.321 ipTM=0.284 tol=9.03
2024-12-08 17:27:25,895 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=45.9 pTM=0.322 ipTM=0.288 tol=5.77
2024-12-08 17:28:16,548 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=45.7 pTM=0.323 ipTM=0.285 tol=6.2
2024-12-08 17:29:07,187 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=45.8 pTM=0.324 ipTM=0.29 tol=6.05
2024-12-08 17:29:57,835 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=45.8 pTM=0.32 ipTM=0.277 tol=4.55
2024-12-08 17:30:48,487 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=45.7 pTM=0.322 ipTM=0.283 tol=8.44
2024-12-08 17:31:39,166 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=45.6 pTM=0.322 ipTM=0.28 tol=4.64
2024-12-08 17:32:29,839 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=45.5 pTM=0.323 ipTM=0.29 tol=8.1
2024-12-08 17:33:20,512 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=45.6 pTM=0.322 ipTM=0.286 tol=7.95
2024-12-08 17:34:11,216 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=45.4 pTM=0.322 ipTM=0.285 tol=5.14
2024-12-08 17:35:01,926 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=45.6 pTM=0.319 ipTM=0.281 tol=11.2
2024-12-08 17:35:52,608 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=45.7 pTM=0.323 ipTM=0.291 tol=8.25
2024-12-08 17:36:43,292 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=45.3 pTM=0.318 ipTM=0.281 tol=5.84
2024-12-08 17:37:33,970 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=45.6 pTM=0.321 ipTM=0.288 tol=5.93
2024-12-08 17:38:24,670 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=45.7 pTM=0.321 ipTM=0.287 tol=7.68
2024-12-08 17:39:15,333 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=45.8 pTM=0.322 ipTM=0.294 tol=7.27
2024-12-08 17:40:06,041 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=45.8 pTM=0.319 ipTM=0.281 tol=10.8
2024-12-08 17:40:56,764 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=45.9 pTM=0.321 ipTM=0.29 tol=8.28
2024-12-08 17:41:47,511 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=45.8 pTM=0.321 ipTM=0.292 tol=6.27
2024-12-08 17:41:47,512 alphafold2_multimer_v3_model_4_seed_000 took 1570.6s (30 recycles)
2024-12-08 17:42:39,293 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=46.2 pTM=0.313 ipTM=0.368
2024-12-08 17:43:30,035 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=46.2 pTM=0.297 ipTM=0.276 tol=27.3
2024-12-08 17:44:20,798 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=46.5 pTM=0.307 ipTM=0.283 tol=15.6
2024-12-08 17:45:11,574 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=46.7 pTM=0.309 ipTM=0.299 tol=8.24
2024-12-08 17:46:02,331 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=47 pTM=0.318 ipTM=0.303 tol=8.98
2024-12-08 17:46:53,068 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=47.9 pTM=0.324 ipTM=0.299 tol=7.62
2024-12-08 17:47:43,800 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=47.8 pTM=0.316 ipTM=0.278 tol=9.64
2024-12-08 17:48:34,564 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=48.3 pTM=0.32 ipTM=0.279 tol=8.59
2024-12-08 17:49:25,344 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=48.2 pTM=0.321 ipTM=0.277 tol=7
2024-12-08 17:50:16,154 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=48.4 pTM=0.321 ipTM=0.266 tol=4.75
2024-12-08 17:51:06,922 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=48.1 pTM=0.315 ipTM=0.252 tol=7.16
2024-12-08 17:51:57,692 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=48 pTM=0.321 ipTM=0.273 tol=7.81
2024-12-08 17:52:48,446 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=47.9 pTM=0.322 ipTM=0.279 tol=5.41
2024-12-08 17:53:39,203 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=48.4 pTM=0.329 ipTM=0.304 tol=8.23
2024-12-08 17:54:29,930 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=48 pTM=0.322 ipTM=0.272 tol=6.56
2024-12-08 17:55:20,637 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=48.1 pTM=0.327 ipTM=0.289 tol=3.18
2024-12-08 17:56:11,330 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=48.1 pTM=0.321 ipTM=0.261 tol=3.46
2024-12-08 17:57:01,991 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=48 pTM=0.323 ipTM=0.278 tol=3.48
2024-12-08 17:57:52,673 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=48 pTM=0.318 ipTM=0.253 tol=3.31
2024-12-08 17:58:43,335 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=48.3 pTM=0.324 ipTM=0.281 tol=3.34
2024-12-08 17:59:34,021 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=48.1 pTM=0.319 ipTM=0.26 tol=7.05
2024-12-08 18:00:24,696 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=47.9 pTM=0.323 ipTM=0.283 tol=7.78
2024-12-08 18:01:15,363 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=48.1 pTM=0.322 ipTM=0.271 tol=5.58
2024-12-08 18:02:06,059 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=48.3 pTM=0.324 ipTM=0.295 tol=8.01
2024-12-08 18:02:56,805 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=48.1 pTM=0.316 ipTM=0.253 tol=9.82
2024-12-08 18:03:47,539 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=48.2 pTM=0.32 ipTM=0.27 tol=7.87
2024-12-08 18:04:38,271 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=47.9 pTM=0.323 ipTM=0.282 tol=9.77
2024-12-08 18:05:28,990 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=48 pTM=0.321 ipTM=0.278 tol=11
2024-12-08 18:06:19,751 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=48.1 pTM=0.318 ipTM=0.265 tol=4.98
2024-12-08 18:07:10,516 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=48.1 pTM=0.323 ipTM=0.287 tol=6.05
2024-12-08 18:08:01,270 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=47.8 pTM=0.321 ipTM=0.27 tol=9.17
2024-12-08 18:08:01,271 alphafold2_multimer_v3_model_5_seed_000 took 1572.6s (30 recycles)
2024-12-08 18:08:02,382 reranking models by 'multimer' metric
2024-12-08 18:08:03,707 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 18:09:49,354 Relaxation took 107.0s
2024-12-08 18:09:49,354 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=49.3 pTM=0.325 ipTM=0.333
2024-12-08 18:11:50,231 Relaxation took 120.9s
2024-12-08 18:11:50,231 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=47.6 pTM=0.31 ipTM=0.323
2024-12-08 18:14:16,501 Relaxation took 146.3s
2024-12-08 18:14:16,502 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=45.8 pTM=0.321 ipTM=0.292
2024-12-08 18:17:44,294 Relaxation took 207.8s
2024-12-08 18:17:44,294 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=47.8 pTM=0.321 ipTM=0.27
2024-12-08 18:20:00,648 Relaxation took 136.4s
2024-12-08 18:20:00,648 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=47.8 pTM=0.301 ipTM=0.259
2024-12-08 18:20:03,396 Done