2024-12-11 13:24:12,968 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-11 13:24:14,486 Running on GPU
2024-12-11 13:24:18,828 Found 6 citations for tools or databases
2024-12-11 13:24:18,828 Query 1/1: SRP9_RAD18 (length 581)
2024-12-11 13:24:19,132 Sleeping for 7s. Reason: PENDING
2024-12-11 13:24:26,390 Sleeping for 6s. Reason: PENDING
2024-12-11 13:24:32,645 Sleeping for 7s. Reason: PENDING
2024-12-11 13:24:39,901 Sleeping for 10s. Reason: PENDING
2024-12-11 13:24:50,158 Sleeping for 8s. Reason: PENDING
2024-12-11 13:24:58,410 Sleeping for 10s. Reason: PENDING
2024-12-11 13:25:08,672 Sleeping for 7s. Reason: PENDING
2024-12-11 13:25:15,934 Sleeping for 6s. Reason: PENDING
2024-12-11 13:25:22,192 Sleeping for 8s. Reason: PENDING
2024-12-11 13:25:30,450 Sleeping for 10s. Reason: PENDING
2024-12-11 13:25:40,712 Sleeping for 8s. Reason: PENDING
2024-12-11 13:25:48,971 Sleeping for 6s. Reason: PENDING
2024-12-11 13:25:55,229 Sleeping for 9s. Reason: PENDING
2024-12-11 13:26:04,487 Sleeping for 7s. Reason: PENDING
2024-12-11 13:26:11,749 Sleeping for 9s. Reason: PENDING
2024-12-11 13:26:21,011 Sleeping for 5s. Reason: RUNNING
2024-12-11 13:26:26,268 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:26:32,524 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:26:38,783 Sleeping for 9s. Reason: RUNNING
2024-12-11 13:26:48,041 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:26:54,301 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:27:00,556 Sleeping for 5s. Reason: RUNNING
2024-12-11 13:27:05,811 Sleeping for 7s. Reason: RUNNING
2024-12-11 13:27:13,066 Sleeping for 9s. Reason: RUNNING
2024-12-11 13:27:22,323 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:27:28,575 Sleeping for 10s. Reason: RUNNING
2024-12-11 13:27:38,836 Sleeping for 8s. Reason: RUNNING
2024-12-11 13:27:47,091 Sleeping for 10s. Reason: RUNNING
2024-12-11 13:27:58,793 Sleeping for 10s. Reason: PENDING
2024-12-11 13:28:09,053 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:28:15,307 Sleeping for 10s. Reason: RUNNING
2024-12-11 13:28:25,565 Sleeping for 9s. Reason: RUNNING
2024-12-11 13:28:34,833 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:28:41,092 Sleeping for 9s. Reason: RUNNING
2024-12-11 13:28:52,578 Setting max_seq=508, max_extra_seq=2048
2024-12-11 13:31:50,307 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=49.7 pTM=0.369 ipTM=0.252
2024-12-11 13:31:57,234 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=49 pTM=0.377 ipTM=0.208 tol=13.6
2024-12-11 13:32:04,172 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=49.6 pTM=0.382 ipTM=0.227 tol=8.55
2024-12-11 13:32:11,114 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=50.1 pTM=0.384 ipTM=0.229 tol=4.91
2024-12-11 13:32:18,069 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=49.9 pTM=0.386 ipTM=0.232 tol=3.07
2024-12-11 13:32:25,024 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=50 pTM=0.392 ipTM=0.26 tol=4.72
2024-12-11 13:32:31,995 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=50.5 pTM=0.386 ipTM=0.23 tol=4.42
2024-12-11 13:32:38,963 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=50.3 pTM=0.389 ipTM=0.257 tol=4.28
2024-12-11 13:32:45,943 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=50.2 pTM=0.383 ipTM=0.217 tol=4
2024-12-11 13:32:52,942 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=51 pTM=0.394 ipTM=0.288 tol=4.41
2024-12-11 13:32:59,933 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=50.2 pTM=0.39 ipTM=0.261 tol=3.98
2024-12-11 13:33:06,922 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=50.8 pTM=0.396 ipTM=0.291 tol=3.64
2024-12-11 13:33:13,917 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=50.2 pTM=0.385 ipTM=0.236 tol=3.48
2024-12-11 13:33:20,904 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=51.1 pTM=0.391 ipTM=0.277 tol=3.11
2024-12-11 13:33:27,910 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=50.4 pTM=0.385 ipTM=0.244 tol=3.62
2024-12-11 13:33:34,913 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=51.5 pTM=0.394 ipTM=0.285 tol=2.46
2024-12-11 13:33:41,919 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=50.8 pTM=0.39 ipTM=0.264 tol=4.71
2024-12-11 13:33:48,917 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=51.2 pTM=0.392 ipTM=0.274 tol=3.14
2024-12-11 13:33:55,920 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=51.4 pTM=0.387 ipTM=0.236 tol=1.6
2024-12-11 13:34:02,931 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=51.4 pTM=0.388 ipTM=0.251 tol=2.58
2024-12-11 13:34:09,940 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=50.8 pTM=0.381 ipTM=0.204 tol=2.45
2024-12-11 13:34:16,953 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=51.2 pTM=0.389 ipTM=0.271 tol=2.82
2024-12-11 13:34:23,974 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=50.8 pTM=0.385 ipTM=0.225 tol=3.21
2024-12-11 13:34:30,990 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=51.4 pTM=0.393 ipTM=0.274 tol=4.53
2024-12-11 13:34:38,000 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=50.4 pTM=0.383 ipTM=0.222 tol=3.42
2024-12-11 13:34:45,008 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=51.4 pTM=0.394 ipTM=0.289 tol=2.26
2024-12-11 13:34:52,012 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=50.2 pTM=0.386 ipTM=0.241 tol=1.87
2024-12-11 13:34:59,021 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=51.6 pTM=0.402 ipTM=0.346 tol=3.14
2024-12-11 13:35:06,043 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=50.3 pTM=0.389 ipTM=0.263 tol=2.72
2024-12-11 13:35:13,051 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=50.9 pTM=0.4 ipTM=0.321 tol=3.29
2024-12-11 13:35:20,063 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=50.4 pTM=0.391 ipTM=0.273 tol=3.56
2024-12-11 13:35:20,064 alphafold2_multimer_v3_model_1_seed_000 took 379.5s (30 recycles)
2024-12-11 13:35:27,291 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=49.7 pTM=0.388 ipTM=0.339
2024-12-11 13:35:34,294 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=51.9 pTM=0.399 ipTM=0.332 tol=9.3
2024-12-11 13:35:41,296 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=51.1 pTM=0.393 ipTM=0.288 tol=4.54
2024-12-11 13:35:48,321 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=51 pTM=0.396 ipTM=0.283 tol=3.91
2024-12-11 13:35:55,334 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=50.9 pTM=0.396 ipTM=0.288 tol=2.91
2024-12-11 13:36:02,347 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=51.2 pTM=0.401 ipTM=0.306 tol=1.54
2024-12-11 13:36:09,373 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=51.4 pTM=0.401 ipTM=0.307 tol=2.51
2024-12-11 13:36:16,412 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=51.6 pTM=0.401 ipTM=0.301 tol=3.22
2024-12-11 13:36:23,451 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=51.6 pTM=0.401 ipTM=0.294 tol=2.33
2024-12-11 13:36:30,489 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=51.8 pTM=0.404 ipTM=0.299 tol=2.06
2024-12-11 13:36:37,540 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=51.4 pTM=0.401 ipTM=0.292 tol=1.26
2024-12-11 13:36:44,587 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=51.8 pTM=0.402 ipTM=0.286 tol=1.57
2024-12-11 13:36:51,616 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=51.5 pTM=0.4 ipTM=0.282 tol=1.1
2024-12-11 13:36:58,643 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=51.7 pTM=0.403 ipTM=0.297 tol=1.27
2024-12-11 13:37:05,695 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=51.6 pTM=0.401 ipTM=0.283 tol=1.58
2024-12-11 13:37:12,723 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=52 pTM=0.403 ipTM=0.283 tol=1.54
2024-12-11 13:37:19,764 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=52 pTM=0.406 ipTM=0.296 tol=2.7
2024-12-11 13:37:26,806 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=51.9 pTM=0.406 ipTM=0.306 tol=1.49
2024-12-11 13:37:33,820 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=52 pTM=0.402 ipTM=0.284 tol=2.89
2024-12-11 13:37:40,849 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=51.8 pTM=0.399 ipTM=0.266 tol=1.55
2024-12-11 13:37:47,880 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=52 pTM=0.401 ipTM=0.274 tol=1.1
2024-12-11 13:37:54,913 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=51.5 pTM=0.399 ipTM=0.269 tol=1.79
2024-12-11 13:38:01,961 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=51.9 pTM=0.404 ipTM=0.28 tol=1.81
2024-12-11 13:38:08,992 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=51.8 pTM=0.403 ipTM=0.271 tol=1.18
2024-12-11 13:38:16,021 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=51.5 pTM=0.399 ipTM=0.267 tol=1.64
2024-12-11 13:38:23,058 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=51.9 pTM=0.401 ipTM=0.265 tol=1.47
2024-12-11 13:38:30,098 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=51.5 pTM=0.401 ipTM=0.272 tol=2
2024-12-11 13:38:37,139 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=51.8 pTM=0.402 ipTM=0.285 tol=1.49
2024-12-11 13:38:44,167 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=51.6 pTM=0.402 ipTM=0.283 tol=2.07
2024-12-11 13:38:51,196 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=51.7 pTM=0.404 ipTM=0.282 tol=1.52
2024-12-11 13:38:58,228 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=51.4 pTM=0.403 ipTM=0.286 tol=1.72
2024-12-11 13:38:58,228 alphafold2_multimer_v3_model_2_seed_000 took 217.9s (30 recycles)
2024-12-11 13:39:05,480 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=48.2 pTM=0.334 ipTM=0.172
2024-12-11 13:39:12,539 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=48.4 pTM=0.312 ipTM=0.153 tol=11.8
2024-12-11 13:39:19,591 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=47.4 pTM=0.321 ipTM=0.174 tol=7.91
2024-12-11 13:39:26,638 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=48.5 pTM=0.323 ipTM=0.221 tol=6.75
2024-12-11 13:39:33,695 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=47.6 pTM=0.338 ipTM=0.23 tol=7.29
2024-12-11 13:39:40,749 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=48.4 pTM=0.339 ipTM=0.24 tol=5.74
2024-12-11 13:39:47,800 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=48.3 pTM=0.345 ipTM=0.236 tol=6.41
2024-12-11 13:39:54,840 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=48.8 pTM=0.347 ipTM=0.255 tol=4.16
2024-12-11 13:40:01,874 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=48.1 pTM=0.351 ipTM=0.24 tol=4.71
2024-12-11 13:40:08,921 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=48.6 pTM=0.347 ipTM=0.244 tol=3.1
2024-12-11 13:40:15,966 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=48.1 pTM=0.348 ipTM=0.219 tol=4.15
2024-12-11 13:40:23,012 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=48.9 pTM=0.349 ipTM=0.241 tol=3.23
2024-12-11 13:40:30,042 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=48.2 pTM=0.348 ipTM=0.224 tol=4.48
2024-12-11 13:40:37,065 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=48.6 pTM=0.343 ipTM=0.239 tol=2.21
2024-12-11 13:40:44,110 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=48.2 pTM=0.341 ipTM=0.21 tol=2.54
2024-12-11 13:40:51,163 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=48.6 pTM=0.345 ipTM=0.229 tol=3.59
2024-12-11 13:40:58,206 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=48.8 pTM=0.358 ipTM=0.265 tol=3.83
2024-12-11 13:41:05,249 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=48.8 pTM=0.349 ipTM=0.222 tol=3.04
2024-12-11 13:41:12,283 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=49.2 pTM=0.348 ipTM=0.213 tol=3.05
2024-12-11 13:41:19,326 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=49.2 pTM=0.343 ipTM=0.203 tol=3.31
2024-12-11 13:41:26,378 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=48.9 pTM=0.345 ipTM=0.199 tol=3.28
2024-12-11 13:41:33,427 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=48.7 pTM=0.345 ipTM=0.222 tol=3.98
2024-12-11 13:41:40,476 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=48.9 pTM=0.353 ipTM=0.228 tol=3.95
2024-12-11 13:41:47,523 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=48.6 pTM=0.347 ipTM=0.22 tol=2.83
2024-12-11 13:41:54,553 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=48.9 pTM=0.345 ipTM=0.213 tol=2.6
2024-12-11 13:42:01,586 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=48.6 pTM=0.343 ipTM=0.226 tol=3.73
2024-12-11 13:42:08,623 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=49 pTM=0.359 ipTM=0.264 tol=4.27
2024-12-11 13:42:15,673 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=48.4 pTM=0.351 ipTM=0.221 tol=2.88
2024-12-11 13:42:22,713 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=48.6 pTM=0.344 ipTM=0.227 tol=2.81
2024-12-11 13:42:29,759 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=48.4 pTM=0.349 ipTM=0.218 tol=2.89
2024-12-11 13:42:36,799 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=48.4 pTM=0.348 ipTM=0.238 tol=2.86
2024-12-11 13:42:36,800 alphafold2_multimer_v3_model_3_seed_000 took 218.3s (30 recycles)
2024-12-11 13:42:44,031 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=48.2 pTM=0.377 ipTM=0.395
2024-12-11 13:42:51,047 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=47.5 pTM=0.376 ipTM=0.303 tol=7.76
2024-12-11 13:42:58,058 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=47.8 pTM=0.384 ipTM=0.314 tol=3.94
2024-12-11 13:43:05,076 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=48.1 pTM=0.385 ipTM=0.284 tol=4.05
2024-12-11 13:43:12,104 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=47.9 pTM=0.389 ipTM=0.295 tol=3.12
2024-12-11 13:43:19,138 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=48.3 pTM=0.393 ipTM=0.303 tol=4.37
2024-12-11 13:43:26,157 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=48.3 pTM=0.394 ipTM=0.306 tol=5.53
2024-12-11 13:43:33,183 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=48.2 pTM=0.393 ipTM=0.306 tol=6.07
2024-12-11 13:43:40,222 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=48.3 pTM=0.391 ipTM=0.296 tol=5.82
2024-12-11 13:43:47,267 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=48.5 pTM=0.392 ipTM=0.299 tol=4.18
2024-12-11 13:43:54,315 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=48.3 pTM=0.394 ipTM=0.3 tol=3.53
2024-12-11 13:44:01,350 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=48.5 pTM=0.397 ipTM=0.304 tol=2.35
2024-12-11 13:44:08,400 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=48.6 pTM=0.397 ipTM=0.313 tol=2.83
2024-12-11 13:44:15,444 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=48.5 pTM=0.393 ipTM=0.295 tol=3.35
2024-12-11 13:44:22,480 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=48.4 pTM=0.395 ipTM=0.306 tol=2.29
2024-12-11 13:44:29,524 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=48.6 pTM=0.394 ipTM=0.292 tol=1.75
2024-12-11 13:44:36,569 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=48.9 pTM=0.394 ipTM=0.3 tol=1.86
2024-12-11 13:44:43,610 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=48.7 pTM=0.393 ipTM=0.295 tol=1.52
2024-12-11 13:44:50,645 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=49 pTM=0.392 ipTM=0.295 tol=2.1
2024-12-11 13:44:57,701 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=49 pTM=0.391 ipTM=0.291 tol=2.98
2024-12-11 13:45:04,746 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=49.1 pTM=0.387 ipTM=0.271 tol=2
2024-12-11 13:45:11,803 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=49 pTM=0.393 ipTM=0.302 tol=2.25
2024-12-11 13:45:18,853 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=48.9 pTM=0.395 ipTM=0.31 tol=2.4
2024-12-11 13:45:25,914 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=48.9 pTM=0.394 ipTM=0.3 tol=1.66
2024-12-11 13:45:32,953 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=48.5 pTM=0.391 ipTM=0.296 tol=2.89
2024-12-11 13:45:39,995 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=48.4 pTM=0.393 ipTM=0.298 tol=4.26
2024-12-11 13:45:47,049 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=48.7 pTM=0.393 ipTM=0.303 tol=4.27
2024-12-11 13:45:54,101 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=48.8 pTM=0.395 ipTM=0.311 tol=4.41
2024-12-11 13:46:01,145 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=48.5 pTM=0.39 ipTM=0.293 tol=4.01
2024-12-11 13:46:08,186 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=48.6 pTM=0.395 ipTM=0.3 tol=5.41
2024-12-11 13:46:15,233 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=48.6 pTM=0.395 ipTM=0.301 tol=6.11
2024-12-11 13:46:15,234 alphafold2_multimer_v3_model_4_seed_000 took 218.2s (30 recycles)
2024-12-11 13:46:22,505 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=49.3 pTM=0.339 ipTM=0.166
2024-12-11 13:46:29,579 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=48.1 pTM=0.339 ipTM=0.15 tol=12.4
2024-12-11 13:46:36,641 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=48.2 pTM=0.349 ipTM=0.145 tol=11
2024-12-11 13:46:43,708 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=48.7 pTM=0.346 ipTM=0.161 tol=8.67
2024-12-11 13:46:50,784 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=48.7 pTM=0.352 ipTM=0.156 tol=8.3
2024-12-11 13:46:57,845 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=48.8 pTM=0.359 ipTM=0.182 tol=3.77
2024-12-11 13:47:04,903 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=48.8 pTM=0.366 ipTM=0.179 tol=6.67
2024-12-11 13:47:11,965 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=49.1 pTM=0.368 ipTM=0.193 tol=6.14
2024-12-11 13:47:19,030 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=49.3 pTM=0.37 ipTM=0.194 tol=3.73
2024-12-11 13:47:26,099 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=49.7 pTM=0.37 ipTM=0.176 tol=3.57
2024-12-11 13:47:33,152 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=49.6 pTM=0.368 ipTM=0.179 tol=4.16
2024-12-11 13:47:40,210 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=49.7 pTM=0.371 ipTM=0.17 tol=5.28
2024-12-11 13:47:47,257 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=49.8 pTM=0.376 ipTM=0.227 tol=4.88
2024-12-11 13:47:54,320 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=50.1 pTM=0.368 ipTM=0.152 tol=4.4
2024-12-11 13:48:01,388 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=49.9 pTM=0.372 ipTM=0.183 tol=6.07
2024-12-11 13:48:08,453 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=49.8 pTM=0.373 ipTM=0.172 tol=5.13
2024-12-11 13:48:15,518 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=49.9 pTM=0.377 ipTM=0.205 tol=5.2
2024-12-11 13:48:22,580 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=49.9 pTM=0.372 ipTM=0.17 tol=4.91
2024-12-11 13:48:29,650 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=50.5 pTM=0.375 ipTM=0.201 tol=3.01
2024-12-11 13:48:36,714 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=50 pTM=0.37 ipTM=0.163 tol=6.16
2024-12-11 13:48:43,790 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=50.3 pTM=0.374 ipTM=0.186 tol=3.67
2024-12-11 13:48:50,856 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=49.8 pTM=0.375 ipTM=0.193 tol=5.31
2024-12-11 13:48:57,925 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=49.8 pTM=0.376 ipTM=0.202 tol=5.54
2024-12-11 13:49:04,997 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=49.7 pTM=0.369 ipTM=0.154 tol=5.63
2024-12-11 13:49:12,063 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=50.2 pTM=0.371 ipTM=0.171 tol=5.91
2024-12-11 13:49:19,135 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=49.9 pTM=0.368 ipTM=0.152 tol=5.64
2024-12-11 13:49:26,199 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=49.9 pTM=0.374 ipTM=0.184 tol=3.31
2024-12-11 13:49:33,272 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=49.5 pTM=0.373 ipTM=0.164 tol=2.74
2024-12-11 13:49:40,341 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=49.8 pTM=0.373 ipTM=0.18 tol=3.33
2024-12-11 13:49:47,417 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=49.3 pTM=0.375 ipTM=0.179 tol=5.31
2024-12-11 13:49:54,478 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=49.4 pTM=0.38 ipTM=0.23 tol=4.42
2024-12-11 13:49:54,479 alphafold2_multimer_v3_model_5_seed_000 took 219.0s (30 recycles)
2024-12-11 13:49:54,705 reranking models by 'multimer' metric
2024-12-11 13:49:59,634 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-11 13:50:26,477 Relaxation took 31.8s
2024-12-11 13:50:26,479 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=48.6 pTM=0.395 ipTM=0.301
2024-12-11 13:50:57,797 Relaxation took 31.3s
2024-12-11 13:50:57,799 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=51.4 pTM=0.403 ipTM=0.286
2024-12-11 13:51:21,072 Relaxation took 23.3s
2024-12-11 13:51:21,073 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=50.4 pTM=0.391 ipTM=0.273
2024-12-11 13:51:54,655 Relaxation took 33.6s
2024-12-11 13:51:54,657 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=49.4 pTM=0.38 ipTM=0.23
2024-12-11 13:52:23,762 Relaxation took 29.1s
2024-12-11 13:52:23,764 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=48.4 pTM=0.348 ipTM=0.238
2024-12-11 13:52:24,844 Done