2024-12-08 16:19:43,310 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 16:19:43,633 Running on GPU
2024-12-08 16:19:46,591 Found 6 citations for tools or databases
2024-12-08 16:19:46,591 Query 1/1: SYVN1_ABHD14A (length 888)
2024-12-08 16:19:46,863 Sleeping for 6s. Reason: PENDING
2024-12-08 16:19:53,121 Sleeping for 9s. Reason: PENDING
2024-12-08 16:20:02,398 Sleeping for 5s. Reason: RUNNING
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2024-12-08 16:20:45,928 Sleeping for 8s. Reason: RUNNING
2024-12-08 16:20:54,185 Sleeping for 7s. Reason: RUNNING
2024-12-08 16:21:01,440 Sleeping for 8s. Reason: RUNNING
2024-12-08 16:21:09,701 Sleeping for 5s. Reason: RUNNING
2024-12-08 16:21:14,957 Sleeping for 9s. Reason: RUNNING
2024-12-08 16:21:24,213 Sleeping for 7s. Reason: RUNNING
2024-12-08 16:21:31,476 Sleeping for 8s. Reason: RUNNING
2024-12-08 16:21:39,741 Sleeping for 10s. Reason: RUNNING
2024-12-08 16:21:50,002 Sleeping for 5s. Reason: RUNNING
2024-12-08 16:21:55,257 Sleeping for 7s. Reason: RUNNING
2024-12-08 16:22:02,515 Sleeping for 10s. Reason: RUNNING
2024-12-08 16:22:12,783 Sleeping for 6s. Reason: RUNNING
2024-12-08 16:22:19,042 Sleeping for 10s. Reason: RUNNING
2024-12-08 16:22:29,311 Sleeping for 10s. Reason: RUNNING
2024-12-08 16:22:39,566 Sleeping for 5s. Reason: RUNNING
2024-12-08 16:22:44,819 Sleeping for 9s. Reason: RUNNING
2024-12-08 16:22:54,075 Sleeping for 7s. Reason: RUNNING
2024-12-08 16:23:01,333 Sleeping for 5s. Reason: RUNNING
2024-12-08 16:23:06,587 Sleeping for 10s. Reason: RUNNING
2024-12-08 16:23:18,473 Sleeping for 7s. Reason: PENDING
2024-12-08 16:23:25,729 Sleeping for 10s. Reason: RUNNING
2024-12-08 16:23:35,985 Sleeping for 5s. Reason: RUNNING
2024-12-08 16:23:41,240 Sleeping for 5s. Reason: RUNNING
2024-12-08 16:23:46,500 Sleeping for 7s. Reason: RUNNING
2024-12-08 16:23:53,761 Sleeping for 6s. Reason: RUNNING
2024-12-08 16:24:00,012 Sleeping for 6s. Reason: RUNNING
2024-12-08 16:24:06,269 Sleeping for 6s. Reason: RUNNING
2024-12-08 16:24:12,524 Sleeping for 6s. Reason: RUNNING
2024-12-08 16:24:18,778 Sleeping for 7s. Reason: RUNNING
2024-12-08 16:24:26,038 Sleeping for 10s. Reason: RUNNING
2024-12-08 16:24:36,299 Sleeping for 5s. Reason: RUNNING
2024-12-08 16:24:41,557 Sleeping for 6s. Reason: RUNNING
2024-12-08 16:24:47,809 Sleeping for 10s. Reason: RUNNING
2024-12-08 16:24:58,070 Sleeping for 10s. Reason: RUNNING
2024-12-08 16:25:11,642 Setting max_seq=508, max_extra_seq=2048
2024-12-08 16:27:23,705 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=61.3 pTM=0.373 ipTM=0.147
2024-12-08 16:27:38,766 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=63.7 pTM=0.415 ipTM=0.305 tol=11.7
2024-12-08 16:27:53,887 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=63.3 pTM=0.415 ipTM=0.222 tol=5.74
2024-12-08 16:28:09,045 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=63.5 pTM=0.407 ipTM=0.191 tol=4.92
2024-12-08 16:28:24,191 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=63.3 pTM=0.404 ipTM=0.184 tol=2.76
2024-12-08 16:28:39,358 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=63.1 pTM=0.398 ipTM=0.167 tol=4.18
2024-12-08 16:28:54,597 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=63.2 pTM=0.396 ipTM=0.161 tol=8.57
2024-12-08 16:29:09,792 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=63.2 pTM=0.396 ipTM=0.159 tol=3.58
2024-12-08 16:29:25,021 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=63 pTM=0.394 ipTM=0.158 tol=2.33
2024-12-08 16:29:40,294 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=63.1 pTM=0.395 ipTM=0.156 tol=7.47
2024-12-08 16:29:55,543 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=62.9 pTM=0.393 ipTM=0.153 tol=6.51
2024-12-08 16:30:10,775 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=62.7 pTM=0.391 ipTM=0.151 tol=1.8
2024-12-08 16:30:26,030 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=62.7 pTM=0.392 ipTM=0.151 tol=2.24
2024-12-08 16:30:41,288 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=62.7 pTM=0.391 ipTM=0.149 tol=2.57
2024-12-08 16:30:56,528 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=62.5 pTM=0.389 ipTM=0.148 tol=1.36
2024-12-08 16:31:11,765 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=62.4 pTM=0.389 ipTM=0.149 tol=1.5
2024-12-08 16:31:26,998 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=62.5 pTM=0.389 ipTM=0.149 tol=1.7
2024-12-08 16:31:42,230 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=62.4 pTM=0.388 ipTM=0.148 tol=4.37
2024-12-08 16:31:57,465 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=62.4 pTM=0.389 ipTM=0.149 tol=3.86
2024-12-08 16:32:12,704 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=62.4 pTM=0.389 ipTM=0.148 tol=2.7
2024-12-08 16:32:27,966 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=62.5 pTM=0.39 ipTM=0.152 tol=2.56
2024-12-08 16:32:43,269 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=62.6 pTM=0.387 ipTM=0.147 tol=3.27
2024-12-08 16:32:58,554 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=62.5 pTM=0.391 ipTM=0.152 tol=4.48
2024-12-08 16:33:13,808 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=62.5 pTM=0.391 ipTM=0.154 tol=4.91
2024-12-08 16:33:29,065 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=62.3 pTM=0.392 ipTM=0.158 tol=1.22
2024-12-08 16:33:44,346 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=62.3 pTM=0.39 ipTM=0.155 tol=4.21
2024-12-08 16:33:59,608 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=62.4 pTM=0.39 ipTM=0.154 tol=5.32
2024-12-08 16:34:14,847 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=62.3 pTM=0.39 ipTM=0.155 tol=2.63
2024-12-08 16:34:30,126 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=62.3 pTM=0.389 ipTM=0.157 tol=2.85
2024-12-08 16:34:45,378 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=62.2 pTM=0.389 ipTM=0.156 tol=2.44
2024-12-08 16:35:00,623 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=62.6 pTM=0.392 ipTM=0.156 tol=2.36
2024-12-08 16:35:00,623 alphafold2_multimer_v3_model_1_seed_000 took 583.9s (30 recycles)
2024-12-08 16:35:16,334 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=58.8 pTM=0.37 ipTM=0.144
2024-12-08 16:35:31,553 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=60.7 pTM=0.391 ipTM=0.219 tol=9.77
2024-12-08 16:35:46,780 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=61 pTM=0.389 ipTM=0.22 tol=4.19
2024-12-08 16:36:02,072 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=60.8 pTM=0.382 ipTM=0.198 tol=3.05
2024-12-08 16:36:17,371 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=61.1 pTM=0.385 ipTM=0.21 tol=3.16
2024-12-08 16:36:32,639 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=61.2 pTM=0.386 ipTM=0.219 tol=1.68
2024-12-08 16:36:47,933 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=61.2 pTM=0.385 ipTM=0.212 tol=1.53
2024-12-08 16:37:03,219 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=61.3 pTM=0.386 ipTM=0.218 tol=2.16
2024-12-08 16:37:18,533 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=61.3 pTM=0.384 ipTM=0.218 tol=1.1
2024-12-08 16:37:33,839 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=61.2 pTM=0.381 ipTM=0.215 tol=1.21
2024-12-08 16:37:49,154 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=61.2 pTM=0.382 ipTM=0.222 tol=1.34
2024-12-08 16:38:04,446 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=61.2 pTM=0.382 ipTM=0.215 tol=1.04
2024-12-08 16:38:19,751 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=61.1 pTM=0.381 ipTM=0.212 tol=1.25
2024-12-08 16:38:35,052 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=61.2 pTM=0.382 ipTM=0.209 tol=1.18
2024-12-08 16:38:50,357 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=61.3 pTM=0.384 ipTM=0.213 tol=1.27
2024-12-08 16:39:05,681 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=60.9 pTM=0.38 ipTM=0.204 tol=1.4
2024-12-08 16:39:20,987 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=61.2 pTM=0.383 ipTM=0.212 tol=1.16
2024-12-08 16:39:36,281 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=61.1 pTM=0.381 ipTM=0.209 tol=0.93
2024-12-08 16:39:51,582 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=61 pTM=0.38 ipTM=0.203 tol=1.6
2024-12-08 16:40:06,883 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=61 pTM=0.379 ipTM=0.206 tol=1.81
2024-12-08 16:40:22,187 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=61.1 pTM=0.38 ipTM=0.203 tol=1.18
2024-12-08 16:40:37,503 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=60.9 pTM=0.378 ipTM=0.197 tol=1.23
2024-12-08 16:40:52,775 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=61 pTM=0.38 ipTM=0.188 tol=1.41
2024-12-08 16:41:08,093 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=61.1 pTM=0.38 ipTM=0.189 tol=1.01
2024-12-08 16:41:23,412 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=60.8 pTM=0.376 ipTM=0.182 tol=1.15
2024-12-08 16:41:38,718 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=60.8 pTM=0.378 ipTM=0.189 tol=0.931
2024-12-08 16:41:54,026 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=60.8 pTM=0.378 ipTM=0.194 tol=1.19
2024-12-08 16:42:09,334 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=61.1 pTM=0.381 ipTM=0.204 tol=1.74
2024-12-08 16:42:24,631 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=60.9 pTM=0.38 ipTM=0.205 tol=0.788
2024-12-08 16:42:39,943 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=60.8 pTM=0.378 ipTM=0.192 tol=0.935
2024-12-08 16:42:55,260 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=60.9 pTM=0.378 ipTM=0.197 tol=0.933
2024-12-08 16:42:55,260 alphafold2_multimer_v3_model_2_seed_000 took 474.1s (30 recycles)
2024-12-08 16:43:11,129 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=60.6 pTM=0.375 ipTM=0.126
2024-12-08 16:43:26,407 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=61.3 pTM=0.394 ipTM=0.176 tol=14
2024-12-08 16:43:41,694 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=60.9 pTM=0.389 ipTM=0.166 tol=5.58
2024-12-08 16:43:56,987 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=61 pTM=0.388 ipTM=0.183 tol=3.26
2024-12-08 16:44:12,284 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=61.1 pTM=0.385 ipTM=0.178 tol=4.16
2024-12-08 16:44:27,567 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=61 pTM=0.383 ipTM=0.183 tol=3.1
2024-12-08 16:44:42,857 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=61.1 pTM=0.387 ipTM=0.185 tol=2.55
2024-12-08 16:44:58,127 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=61 pTM=0.385 ipTM=0.189 tol=1.85
2024-12-08 16:45:13,412 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61.3 pTM=0.385 ipTM=0.186 tol=1.74
2024-12-08 16:45:28,745 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=61.2 pTM=0.383 ipTM=0.181 tol=3.26
2024-12-08 16:45:44,077 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=61.3 pTM=0.385 ipTM=0.183 tol=2.47
2024-12-08 16:45:59,409 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=61.2 pTM=0.379 ipTM=0.157 tol=3.35
2024-12-08 16:46:14,734 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=61.1 pTM=0.379 ipTM=0.154 tol=1.62
2024-12-08 16:46:30,052 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=61.2 pTM=0.389 ipTM=0.169 tol=2.18
2024-12-08 16:46:45,375 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=61.1 pTM=0.386 ipTM=0.159 tol=1.85
2024-12-08 16:47:00,685 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=61.2 pTM=0.388 ipTM=0.176 tol=2.2
2024-12-08 16:47:15,996 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=61.3 pTM=0.391 ipTM=0.178 tol=2.98
2024-12-08 16:47:31,322 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61.2 pTM=0.385 ipTM=0.158 tol=2.95
2024-12-08 16:47:46,651 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=61.3 pTM=0.389 ipTM=0.16 tol=1.49
2024-12-08 16:48:01,948 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61.3 pTM=0.392 ipTM=0.17 tol=1.3
2024-12-08 16:48:17,246 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=61.3 pTM=0.397 ipTM=0.18 tol=1.65
2024-12-08 16:48:32,572 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=61.4 pTM=0.395 ipTM=0.174 tol=1.29
2024-12-08 16:48:47,878 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=61.5 pTM=0.4 ipTM=0.176 tol=1.69
2024-12-08 16:49:03,191 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=61.6 pTM=0.401 ipTM=0.179 tol=1.44
2024-12-08 16:49:18,510 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.5 pTM=0.395 ipTM=0.164 tol=1.78
2024-12-08 16:49:33,835 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61.3 pTM=0.391 ipTM=0.153 tol=1.72
2024-12-08 16:49:49,139 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=61.3 pTM=0.393 ipTM=0.158 tol=1.39
2024-12-08 16:50:04,445 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=61.2 pTM=0.395 ipTM=0.167 tol=1.11
2024-12-08 16:50:19,784 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=61.3 pTM=0.395 ipTM=0.162 tol=1.84
2024-12-08 16:50:35,118 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=61.3 pTM=0.393 ipTM=0.157 tol=1.84
2024-12-08 16:50:50,449 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=61.4 pTM=0.399 ipTM=0.173 tol=3.36
2024-12-08 16:50:50,449 alphafold2_multimer_v3_model_3_seed_000 took 474.7s (30 recycles)
2024-12-08 16:51:06,266 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=56.7 pTM=0.343 ipTM=0.13
2024-12-08 16:51:21,545 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=57.2 pTM=0.386 ipTM=0.237 tol=17
2024-12-08 16:51:36,857 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=59.2 pTM=0.384 ipTM=0.202 tol=9.84
2024-12-08 16:51:52,178 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=58.9 pTM=0.391 ipTM=0.22 tol=7.15
2024-12-08 16:52:07,506 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=59.6 pTM=0.395 ipTM=0.226 tol=6.79
2024-12-08 16:52:22,839 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=59.3 pTM=0.393 ipTM=0.219 tol=4.21
2024-12-08 16:52:38,143 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=59.3 pTM=0.395 ipTM=0.218 tol=3.1
2024-12-08 16:52:53,461 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=59.6 pTM=0.394 ipTM=0.211 tol=1.71
2024-12-08 16:53:08,795 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=59.6 pTM=0.395 ipTM=0.211 tol=3.67
2024-12-08 16:53:24,120 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=59.8 pTM=0.393 ipTM=0.208 tol=4.34
2024-12-08 16:53:39,442 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=59.8 pTM=0.396 ipTM=0.216 tol=4.54
2024-12-08 16:53:54,749 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=60.1 pTM=0.397 ipTM=0.218 tol=4.33
2024-12-08 16:54:10,062 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=59.8 pTM=0.402 ipTM=0.233 tol=4.27
2024-12-08 16:54:25,369 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=59.9 pTM=0.396 ipTM=0.214 tol=2.75
2024-12-08 16:54:40,695 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=59.5 pTM=0.396 ipTM=0.217 tol=3.44
2024-12-08 16:54:56,033 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=60.1 pTM=0.396 ipTM=0.215 tol=2.14
2024-12-08 16:55:11,367 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=59.8 pTM=0.397 ipTM=0.22 tol=4.55
2024-12-08 16:55:26,679 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=60 pTM=0.394 ipTM=0.209 tol=5.07
2024-12-08 16:55:42,022 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=59.7 pTM=0.396 ipTM=0.215 tol=4.69
2024-12-08 16:55:57,362 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=60.2 pTM=0.394 ipTM=0.207 tol=2.72
2024-12-08 16:56:12,697 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=59.5 pTM=0.395 ipTM=0.217 tol=2.7
2024-12-08 16:56:28,030 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=59.8 pTM=0.393 ipTM=0.208 tol=4.41
2024-12-08 16:56:43,350 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=59.6 pTM=0.394 ipTM=0.212 tol=4.78
2024-12-08 16:56:58,685 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=60.2 pTM=0.395 ipTM=0.212 tol=4.8
2024-12-08 16:57:14,008 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=60 pTM=0.398 ipTM=0.221 tol=2.4
2024-12-08 16:57:29,343 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60.1 pTM=0.393 ipTM=0.206 tol=3.52
2024-12-08 16:57:44,692 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=59.6 pTM=0.397 ipTM=0.22 tol=3.96
2024-12-08 16:58:00,013 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=59.9 pTM=0.393 ipTM=0.21 tol=3.7
2024-12-08 16:58:15,342 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=59.9 pTM=0.397 ipTM=0.219 tol=5.09
2024-12-08 16:58:30,655 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=60.1 pTM=0.396 ipTM=0.215 tol=4.62
2024-12-08 16:58:45,967 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=59.6 pTM=0.398 ipTM=0.224 tol=3.59
2024-12-08 16:58:45,968 alphafold2_multimer_v3_model_4_seed_000 took 475.0s (30 recycles)
2024-12-08 16:59:01,764 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=58.6 pTM=0.386 ipTM=0.213
2024-12-08 16:59:17,074 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=60.5 pTM=0.394 ipTM=0.187 tol=9.09
2024-12-08 16:59:32,383 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=60.6 pTM=0.391 ipTM=0.168 tol=5.84
2024-12-08 16:59:47,695 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=60.7 pTM=0.391 ipTM=0.17 tol=3.8
2024-12-08 17:00:03,024 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61 pTM=0.392 ipTM=0.166 tol=3.65
2024-12-08 17:00:18,339 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=60.6 pTM=0.389 ipTM=0.167 tol=2.58
2024-12-08 17:00:33,636 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=60.9 pTM=0.391 ipTM=0.166 tol=3.26
2024-12-08 17:00:48,954 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=61.2 pTM=0.396 ipTM=0.175 tol=4.11
2024-12-08 17:01:04,272 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=61.5 pTM=0.397 ipTM=0.177 tol=2.76
2024-12-08 17:01:19,584 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=61.4 pTM=0.401 ipTM=0.187 tol=2.22
2024-12-08 17:01:34,920 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=61.6 pTM=0.398 ipTM=0.183 tol=4.06
2024-12-08 17:01:50,234 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=61.5 pTM=0.401 ipTM=0.188 tol=3.38
2024-12-08 17:02:05,554 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=61.3 pTM=0.403 ipTM=0.19 tol=1.48
2024-12-08 17:02:20,862 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=61.3 pTM=0.402 ipTM=0.191 tol=2.2
2024-12-08 17:02:36,180 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=61.4 pTM=0.401 ipTM=0.188 tol=2.85
2024-12-08 17:02:51,498 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=61.2 pTM=0.402 ipTM=0.191 tol=3.19
2024-12-08 17:03:06,802 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=61.5 pTM=0.405 ipTM=0.191 tol=1.83
2024-12-08 17:03:22,134 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=61.3 pTM=0.402 ipTM=0.19 tol=3.26
2024-12-08 17:03:37,458 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61.3 pTM=0.403 ipTM=0.189 tol=1.88
2024-12-08 17:03:52,774 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61.3 pTM=0.404 ipTM=0.191 tol=2.37
2024-12-08 17:04:08,082 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=61.1 pTM=0.403 ipTM=0.193 tol=2.02
2024-12-08 17:04:23,372 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=61.3 pTM=0.402 ipTM=0.19 tol=1.52
2024-12-08 17:04:38,685 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=61.1 pTM=0.402 ipTM=0.19 tol=1.31
2024-12-08 17:04:53,994 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=61.3 pTM=0.403 ipTM=0.192 tol=1.27
2024-12-08 17:05:09,305 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61.1 pTM=0.401 ipTM=0.19 tol=1.33
2024-12-08 17:05:24,634 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=60.9 pTM=0.402 ipTM=0.193 tol=2.33
2024-12-08 17:05:39,954 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=60.8 pTM=0.399 ipTM=0.188 tol=2.68
2024-12-08 17:05:55,270 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=60.9 pTM=0.399 ipTM=0.191 tol=3.96
2024-12-08 17:06:10,579 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61 pTM=0.399 ipTM=0.189 tol=3.78
2024-12-08 17:06:25,915 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=61 pTM=0.401 ipTM=0.19 tol=1.77
2024-12-08 17:06:41,234 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=61.1 pTM=0.4 ipTM=0.186 tol=1.89
2024-12-08 17:06:41,235 alphafold2_multimer_v3_model_5_seed_000 took 474.8s (30 recycles)
2024-12-08 17:06:41,731 reranking models by 'multimer' metric
2024-12-08 17:06:44,851 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 17:08:09,681 Relaxation took 87.9s
2024-12-08 17:08:09,682 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=59.6 pTM=0.398 ipTM=0.224
2024-12-08 17:09:05,924 Relaxation took 56.2s
2024-12-08 17:09:05,924 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=60.9 pTM=0.378 ipTM=0.197
2024-12-08 17:09:46,725 Relaxation took 40.8s
2024-12-08 17:09:46,725 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=61.1 pTM=0.4 ipTM=0.186
2024-12-08 17:11:03,961 Relaxation took 77.2s
2024-12-08 17:11:03,961 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=61.4 pTM=0.399 ipTM=0.173
2024-12-08 17:12:18,107 Relaxation took 74.1s
2024-12-08 17:12:18,107 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=62.6 pTM=0.392 ipTM=0.156
2024-12-08 17:12:19,714 Done