2024-12-08 16:35:40,053 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-08 16:35:40,348 Running on GPU 2024-12-08 16:35:43,750 Found 6 citations for tools or databases 2024-12-08 16:35:43,750 Query 1/1: TBL1XR1_CYP2J2 (length 1016) 2024-12-08 16:35:44,041 Sleeping for 8s. Reason: PENDING 2024-12-08 16:35:52,297 Sleeping for 8s. Reason: RUNNING 2024-12-08 16:36:00,553 Sleeping for 7s. Reason: RUNNING 2024-12-08 16:36:07,807 Sleeping for 5s. Reason: RUNNING 2024-12-08 16:36:13,068 Sleeping for 6s. Reason: RUNNING 2024-12-08 16:36:19,327 Sleeping for 10s. Reason: RUNNING 2024-12-08 16:36:29,586 Sleeping for 5s. Reason: RUNNING 2024-12-08 16:36:34,843 Sleeping for 8s. Reason: RUNNING 2024-12-08 16:36:43,100 Sleeping for 9s. Reason: RUNNING 2024-12-08 16:36:52,362 Sleeping for 9s. Reason: RUNNING 2024-12-08 16:37:01,628 Sleeping for 8s. Reason: RUNNING 2024-12-08 16:37:09,897 Sleeping for 8s. Reason: RUNNING 2024-12-08 16:37:18,160 Sleeping for 5s. Reason: RUNNING 2024-12-08 16:37:23,415 Sleeping for 7s. Reason: RUNNING 2024-12-08 16:37:30,681 Sleeping for 9s. Reason: RUNNING 2024-12-08 16:37:39,939 Sleeping for 10s. Reason: RUNNING 2024-12-08 16:37:50,205 Sleeping for 8s. Reason: RUNNING 2024-12-08 16:37:58,463 Sleeping for 6s. Reason: RUNNING 2024-12-08 16:38:04,716 Sleeping for 6s. Reason: RUNNING 2024-12-08 16:38:10,974 Sleeping for 7s. Reason: RUNNING 2024-12-08 16:38:18,235 Sleeping for 9s. Reason: RUNNING 2024-12-08 16:38:27,491 Sleeping for 8s. Reason: RUNNING 2024-12-08 16:38:35,750 Sleeping for 10s. Reason: RUNNING 2024-12-08 16:38:46,009 Sleeping for 10s. Reason: RUNNING 2024-12-08 16:38:56,272 Sleeping for 6s. Reason: RUNNING 2024-12-08 16:39:02,528 Sleeping for 9s. Reason: RUNNING 2024-12-08 16:39:11,789 Sleeping for 7s. Reason: RUNNING 2024-12-08 16:39:19,044 Sleeping for 9s. Reason: RUNNING 2024-12-08 16:39:28,304 Sleeping for 6s. Reason: RUNNING 2024-12-08 16:39:34,557 Sleeping for 9s. Reason: RUNNING 2024-12-08 16:39:43,815 Sleeping for 7s. Reason: RUNNING 2024-12-08 16:39:51,070 Sleeping for 5s. Reason: RUNNING 2024-12-08 16:39:56,327 Sleeping for 6s. Reason: RUNNING 2024-12-08 16:40:04,537 Sleeping for 5s. Reason: PENDING 2024-12-08 16:40:09,796 Sleeping for 9s. Reason: RUNNING 2024-12-08 16:40:19,060 Sleeping for 6s. Reason: RUNNING 2024-12-08 16:40:25,319 Sleeping for 6s. Reason: RUNNING 2024-12-08 16:40:31,570 Sleeping for 5s. Reason: RUNNING 2024-12-08 16:40:36,829 Sleeping for 5s. Reason: RUNNING 2024-12-08 16:40:42,088 Sleeping for 8s. Reason: RUNNING 2024-12-08 16:40:50,341 Sleeping for 7s. Reason: RUNNING 2024-12-08 16:40:57,596 Sleeping for 7s. Reason: RUNNING 2024-12-08 16:41:05,011 Sleeping for 8s. Reason: RUNNING 2024-12-08 16:41:13,270 Sleeping for 10s. Reason: RUNNING 2024-12-08 16:41:23,541 Sleeping for 6s. Reason: RUNNING 2024-12-08 16:41:29,795 Sleeping for 5s. Reason: RUNNING 2024-12-08 16:41:35,050 Sleeping for 7s. Reason: RUNNING 2024-12-08 16:41:42,310 Sleeping for 8s. Reason: RUNNING 2024-12-08 16:41:50,567 Sleeping for 8s. Reason: RUNNING 2024-12-08 16:41:58,825 Sleeping for 8s. Reason: RUNNING 2024-12-08 16:42:07,086 Sleeping for 7s. Reason: RUNNING 2024-12-08 16:42:14,350 Sleeping for 5s. Reason: RUNNING 2024-12-08 16:42:19,602 Sleeping for 6s. Reason: RUNNING 2024-12-08 16:42:25,870 Sleeping for 10s. Reason: RUNNING 2024-12-08 16:42:36,132 Sleeping for 6s. Reason: RUNNING 2024-12-08 16:42:42,390 Sleeping for 7s. Reason: RUNNING 2024-12-08 16:42:49,650 Sleeping for 9s. Reason: RUNNING 2024-12-08 16:42:58,913 Sleeping for 10s. Reason: RUNNING 2024-12-08 16:43:14,627 Setting max_seq=508, max_extra_seq=2048 2024-12-08 16:45:28,226 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=83.3 pTM=0.551 ipTM=0.201 2024-12-08 16:45:49,000 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=84.1 pTM=0.558 ipTM=0.201 tol=2.73 2024-12-08 16:46:09,781 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=83.5 pTM=0.562 ipTM=0.207 tol=3.54 2024-12-08 16:46:30,627 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=84 pTM=0.556 ipTM=0.197 tol=1.93 2024-12-08 16:46:51,481 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=83.8 pTM=0.557 ipTM=0.195 tol=1.92 2024-12-08 16:47:12,369 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=83.9 pTM=0.555 ipTM=0.199 tol=1.69 2024-12-08 16:47:33,266 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=83.9 pTM=0.558 ipTM=0.197 tol=2.39 2024-12-08 16:47:54,202 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=84 pTM=0.553 ipTM=0.194 tol=1.61 2024-12-08 16:48:15,120 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=83.9 pTM=0.556 ipTM=0.193 tol=1.19 2024-12-08 16:48:36,035 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=84.1 pTM=0.554 ipTM=0.195 tol=1.28 2024-12-08 16:48:56,960 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=84 pTM=0.557 ipTM=0.195 tol=2.15 2024-12-08 16:49:17,917 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=84.2 pTM=0.55 ipTM=0.189 tol=1.31 2024-12-08 16:49:38,844 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=83.9 pTM=0.555 ipTM=0.191 tol=1.51 2024-12-08 16:49:59,789 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=83.9 pTM=0.55 ipTM=0.19 tol=1.54 2024-12-08 16:50:20,758 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=83.8 pTM=0.557 ipTM=0.196 tol=1.55 2024-12-08 16:50:41,740 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=83.9 pTM=0.551 ipTM=0.191 tol=1.48 2024-12-08 16:51:02,701 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=83.8 pTM=0.558 ipTM=0.199 tol=1.32 2024-12-08 16:51:23,658 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=83.9 pTM=0.555 ipTM=0.199 tol=1.77 2024-12-08 16:51:44,647 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=83.7 pTM=0.562 ipTM=0.205 tol=1.75 2024-12-08 16:52:05,665 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=83.7 pTM=0.552 ipTM=0.192 tol=1.7 2024-12-08 16:52:26,629 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=83.6 pTM=0.559 ipTM=0.202 tol=1.99 2024-12-08 16:52:47,612 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=83.9 pTM=0.551 ipTM=0.192 tol=1.92 2024-12-08 16:53:08,599 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=83.5 pTM=0.557 ipTM=0.2 tol=1.77 2024-12-08 16:53:29,584 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=83.9 pTM=0.553 ipTM=0.196 tol=1.65 2024-12-08 16:53:50,538 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=83.4 pTM=0.562 ipTM=0.205 tol=1.58 2024-12-08 16:54:11,500 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=83.8 pTM=0.552 ipTM=0.193 tol=1.83 2024-12-08 16:54:32,483 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=83.6 pTM=0.558 ipTM=0.2 tol=2 2024-12-08 16:54:53,504 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=83.8 pTM=0.551 ipTM=0.191 tol=1.77 2024-12-08 16:55:14,478 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=83.5 pTM=0.56 ipTM=0.202 tol=1.81 2024-12-08 16:55:35,478 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=83.6 pTM=0.553 ipTM=0.195 tol=1.79 2024-12-08 16:55:56,483 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=83.6 pTM=0.561 ipTM=0.204 tol=2.04 2024-12-08 16:55:56,484 alphafold2_multimer_v3_model_1_seed_000 took 756.9s (30 recycles) 2024-12-08 16:56:18,119 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=82.7 pTM=0.534 ipTM=0.165 2024-12-08 16:56:39,128 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=83.4 pTM=0.533 ipTM=0.16 tol=6.53 2024-12-08 16:57:00,094 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=83.1 pTM=0.524 ipTM=0.154 tol=3.42 2024-12-08 16:57:21,067 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=83.3 pTM=0.524 ipTM=0.161 tol=1.09 2024-12-08 16:57:42,089 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=83.2 pTM=0.521 ipTM=0.158 tol=2.42 2024-12-08 16:58:03,058 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=83.2 pTM=0.525 ipTM=0.166 tol=1.78 2024-12-08 16:58:24,018 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=83.1 pTM=0.521 ipTM=0.161 tol=1.88 2024-12-08 16:58:44,984 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=83.1 pTM=0.523 ipTM=0.168 tol=1.77 2024-12-08 16:59:05,951 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=83.2 pTM=0.521 ipTM=0.167 tol=2.7 2024-12-08 16:59:26,912 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=83.1 pTM=0.521 ipTM=0.164 tol=1.52 2024-12-08 16:59:47,877 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=83.2 pTM=0.521 ipTM=0.165 tol=1.77 2024-12-08 17:00:08,831 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=83.1 pTM=0.522 ipTM=0.171 tol=1.42 2024-12-08 17:00:29,792 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=83.2 pTM=0.521 ipTM=0.168 tol=2.7 2024-12-08 17:00:50,735 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=83 pTM=0.523 ipTM=0.175 tol=3.17 2024-12-08 17:01:11,709 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=83.2 pTM=0.521 ipTM=0.169 tol=0.99 2024-12-08 17:01:32,653 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=83 pTM=0.521 ipTM=0.166 tol=0.824 2024-12-08 17:01:53,585 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=83.1 pTM=0.521 ipTM=0.168 tol=1.31 2024-12-08 17:02:14,549 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=83.3 pTM=0.523 ipTM=0.165 tol=2.71 2024-12-08 17:02:35,535 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=83.1 pTM=0.522 ipTM=0.17 tol=1.69 2024-12-08 17:02:56,458 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=83.2 pTM=0.524 ipTM=0.168 tol=1.59 2024-12-08 17:03:17,411 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=83.3 pTM=0.524 ipTM=0.171 tol=0.907 2024-12-08 17:03:38,368 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=83.2 pTM=0.521 ipTM=0.164 tol=0.727 2024-12-08 17:03:59,344 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=83.2 pTM=0.522 ipTM=0.166 tol=1.89 2024-12-08 17:04:20,293 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=83.4 pTM=0.522 ipTM=0.163 tol=2.2 2024-12-08 17:04:41,253 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=83.2 pTM=0.522 ipTM=0.164 tol=1.25 2024-12-08 17:05:02,216 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=83.1 pTM=0.521 ipTM=0.167 tol=0.56 2024-12-08 17:05:23,195 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=83.2 pTM=0.521 ipTM=0.171 tol=0.96 2024-12-08 17:05:44,117 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=83.1 pTM=0.522 ipTM=0.168 tol=1.79 2024-12-08 17:06:05,092 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=83.2 pTM=0.523 ipTM=0.17 tol=0.808 2024-12-08 17:06:26,045 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=83.2 pTM=0.521 ipTM=0.163 tol=0.97 2024-12-08 17:06:46,972 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=83.1 pTM=0.523 ipTM=0.169 tol=1.07 2024-12-08 17:06:46,973 alphafold2_multimer_v3_model_2_seed_000 took 649.8s (30 recycles) 2024-12-08 17:07:08,501 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=81.9 pTM=0.569 ipTM=0.261 2024-12-08 17:07:29,438 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=83.6 pTM=0.558 ipTM=0.215 tol=5.75 2024-12-08 17:07:50,366 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=83.4 pTM=0.583 ipTM=0.295 tol=3.18 2024-12-08 17:08:11,350 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=83.8 pTM=0.562 ipTM=0.216 tol=4.07 2024-12-08 17:08:32,350 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=83.6 pTM=0.565 ipTM=0.235 tol=2.83 2024-12-08 17:08:53,326 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=83.4 pTM=0.565 ipTM=0.225 tol=0.823 2024-12-08 17:09:14,323 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=83.3 pTM=0.567 ipTM=0.229 tol=0.754 2024-12-08 17:09:35,314 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=83.3 pTM=0.56 ipTM=0.213 tol=1.56 2024-12-08 17:09:56,304 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=83.2 pTM=0.562 ipTM=0.22 tol=1.17 2024-12-08 17:10:17,241 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=83.2 pTM=0.556 ipTM=0.206 tol=0.825 2024-12-08 17:10:38,201 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=83 pTM=0.554 ipTM=0.204 tol=0.65 2024-12-08 17:10:59,167 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=83.1 pTM=0.553 ipTM=0.201 tol=0.465 2024-12-08 17:10:59,168 alphafold2_multimer_v3_model_3_seed_000 took 251.6s (11 recycles) 2024-12-08 17:11:20,675 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=81.9 pTM=0.569 ipTM=0.27 2024-12-08 17:11:41,597 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=83.4 pTM=0.54 ipTM=0.198 tol=3.68 2024-12-08 17:12:02,526 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=82.9 pTM=0.538 ipTM=0.2 tol=6.31 2024-12-08 17:12:23,515 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=83.8 pTM=0.524 ipTM=0.165 tol=2.09 2024-12-08 17:12:44,486 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=83.2 pTM=0.521 ipTM=0.177 tol=4.89 2024-12-08 17:13:05,520 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=83.8 pTM=0.526 ipTM=0.176 tol=4.57 2024-12-08 17:13:26,571 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=83.4 pTM=0.527 ipTM=0.179 tol=1.24 2024-12-08 17:13:47,618 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=83.7 pTM=0.524 ipTM=0.181 tol=3.51 2024-12-08 17:14:08,661 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=83.2 pTM=0.526 ipTM=0.187 tol=1.84 2024-12-08 17:14:29,719 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=83.9 pTM=0.524 ipTM=0.175 tol=1.96 2024-12-08 17:14:50,757 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=83.1 pTM=0.531 ipTM=0.191 tol=3.27 2024-12-08 17:15:11,803 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=84 pTM=0.526 ipTM=0.174 tol=1.9 2024-12-08 17:15:32,870 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=83.4 pTM=0.525 ipTM=0.184 tol=3.38 2024-12-08 17:15:53,907 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=83.6 pTM=0.526 ipTM=0.18 tol=2.05 2024-12-08 17:16:14,928 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=83.4 pTM=0.532 ipTM=0.197 tol=3.45 2024-12-08 17:16:35,968 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=83.9 pTM=0.528 ipTM=0.173 tol=2.57 2024-12-08 17:16:56,987 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=83.1 pTM=0.531 ipTM=0.19 tol=1.81 2024-12-08 17:17:18,013 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=84 pTM=0.527 ipTM=0.172 tol=1.51 2024-12-08 17:17:38,966 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=83.1 pTM=0.529 ipTM=0.187 tol=1.79 2024-12-08 17:17:59,975 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=83.9 pTM=0.527 ipTM=0.176 tol=1.51 2024-12-08 17:18:20,955 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=83.1 pTM=0.53 ipTM=0.19 tol=1.71 2024-12-08 17:18:41,975 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=84 pTM=0.526 ipTM=0.17 tol=1.89 2024-12-08 17:19:02,936 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=83.2 pTM=0.528 ipTM=0.187 tol=1.88 2024-12-08 17:19:23,962 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=84 pTM=0.528 ipTM=0.172 tol=2.38 2024-12-08 17:19:44,969 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=83.2 pTM=0.527 ipTM=0.185 tol=2.94 2024-12-08 17:20:05,968 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=83.7 pTM=0.526 ipTM=0.182 tol=1.78 2024-12-08 17:20:26,926 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=83.1 pTM=0.527 ipTM=0.187 tol=1.59 2024-12-08 17:20:47,928 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=83.8 pTM=0.528 ipTM=0.18 tol=2.13 2024-12-08 17:21:08,917 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=83.2 pTM=0.531 ipTM=0.192 tol=1.4 2024-12-08 17:21:29,909 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=83.7 pTM=0.528 ipTM=0.18 tol=1.89 2024-12-08 17:21:50,874 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=83.2 pTM=0.528 ipTM=0.187 tol=2.17 2024-12-08 17:21:50,875 alphafold2_multimer_v3_model_4_seed_000 took 651.1s (30 recycles) 2024-12-08 17:22:12,450 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=80.8 pTM=0.566 ipTM=0.267 2024-12-08 17:22:33,463 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=83.1 pTM=0.557 ipTM=0.223 tol=5.36 2024-12-08 17:22:54,486 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=83.7 pTM=0.552 ipTM=0.194 tol=2.08 2024-12-08 17:23:15,535 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=84 pTM=0.553 ipTM=0.198 tol=2.33 2024-12-08 17:23:36,615 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=84.2 pTM=0.547 ipTM=0.182 tol=1.45 2024-12-08 17:23:57,695 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=83.9 pTM=0.552 ipTM=0.195 tol=2.63 2024-12-08 17:24:18,786 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=84.2 pTM=0.547 ipTM=0.183 tol=1.91 2024-12-08 17:24:39,868 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=83.9 pTM=0.55 ipTM=0.19 tol=1.67 2024-12-08 17:25:00,981 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=84.1 pTM=0.549 ipTM=0.19 tol=1.75 2024-12-08 17:25:22,069 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=84.2 pTM=0.544 ipTM=0.179 tol=0.957 2024-12-08 17:25:43,152 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=84.2 pTM=0.543 ipTM=0.182 tol=0.825 2024-12-08 17:26:04,243 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=84.2 pTM=0.54 ipTM=0.17 tol=1.19 2024-12-08 17:26:25,338 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=84.2 pTM=0.539 ipTM=0.174 tol=1.08 2024-12-08 17:26:46,426 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=83.9 pTM=0.537 ipTM=0.167 tol=1.2 2024-12-08 17:27:07,547 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=84.5 pTM=0.539 ipTM=0.173 tol=0.973 2024-12-08 17:27:28,645 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=84.1 pTM=0.533 ipTM=0.162 tol=1.3 2024-12-08 17:27:49,719 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=84.1 pTM=0.532 ipTM=0.166 tol=1.33 2024-12-08 17:28:10,808 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=84.2 pTM=0.534 ipTM=0.165 tol=1.14 2024-12-08 17:28:31,905 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=84.1 pTM=0.533 ipTM=0.167 tol=0.634 2024-12-08 17:28:53,002 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=84.1 pTM=0.535 ipTM=0.166 tol=0.704 2024-12-08 17:29:14,069 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=84.2 pTM=0.535 ipTM=0.168 tol=0.877 2024-12-08 17:29:35,192 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=84.3 pTM=0.532 ipTM=0.159 tol=0.471 2024-12-08 17:29:35,193 alphafold2_multimer_v3_model_5_seed_000 took 463.7s (21 recycles) 2024-12-08 17:29:35,828 reranking models by 'multimer' metric 2024-12-08 17:29:39,220 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-08 17:30:48,813 Relaxation took 73.0s 2024-12-08 17:30:48,813 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=83.6 pTM=0.561 ipTM=0.204 2024-12-08 17:41:45,431 Relaxation took 656.6s 2024-12-08 17:41:45,431 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=83.1 pTM=0.553 ipTM=0.201 2024-12-08 17:42:52,162 Relaxation took 66.7s 2024-12-08 17:42:52,162 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=83.2 pTM=0.528 ipTM=0.187 2024-12-08 17:44:16,335 Relaxation took 84.2s 2024-12-08 17:44:16,335 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=83.1 pTM=0.523 ipTM=0.169 2024-12-08 17:44:51,370 Relaxation took 35.0s 2024-12-08 17:44:51,370 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=84.3 pTM=0.532 ipTM=0.159 2024-12-08 17:44:53,282 Done