2024-12-08 16:43:22,688 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 16:43:23,014 Running on GPU
2024-12-08 16:43:25,000 Found 6 citations for tools or databases
2024-12-08 16:43:25,000 Query 1/1: TLE2_CCT3 (length 1288)
2024-12-08 16:43:25,273 Sleeping for 5s. Reason: PENDING
2024-12-08 16:43:30,531 Sleeping for 7s. Reason: RUNNING
2024-12-08 16:43:37,793 Sleeping for 8s. Reason: RUNNING
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2024-12-08 16:44:16,092 Sleeping for 9s. Reason: RUNNING
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2024-12-08 16:44:33,609 Sleeping for 6s. Reason: RUNNING
2024-12-08 16:44:39,872 Sleeping for 7s. Reason: RUNNING
2024-12-08 16:44:47,157 Sleeping for 9s. Reason: RUNNING
2024-12-08 16:44:56,428 Sleeping for 6s. Reason: RUNNING
2024-12-08 16:45:02,680 Sleeping for 8s. Reason: RUNNING
2024-12-08 16:45:10,937 Sleeping for 6s. Reason: RUNNING
2024-12-08 16:45:17,194 Sleeping for 8s. Reason: RUNNING
2024-12-08 16:45:25,452 Sleeping for 10s. Reason: RUNNING
2024-12-08 16:45:35,714 Sleeping for 6s. Reason: RUNNING
2024-12-08 16:45:41,968 Sleeping for 6s. Reason: RUNNING
2024-12-08 16:45:48,220 Sleeping for 7s. Reason: RUNNING
2024-12-08 16:45:55,476 Sleeping for 7s. Reason: RUNNING
2024-12-08 16:46:02,737 Sleeping for 9s. Reason: RUNNING
2024-12-08 16:46:12,002 Sleeping for 7s. Reason: RUNNING
2024-12-08 16:46:19,269 Sleeping for 10s. Reason: RUNNING
2024-12-08 16:46:29,540 Sleeping for 10s. Reason: RUNNING
2024-12-08 16:46:41,609 Sleeping for 8s. Reason: PENDING
2024-12-08 16:46:49,875 Sleeping for 7s. Reason: PENDING
2024-12-08 16:46:57,135 Sleeping for 9s. Reason: RUNNING
2024-12-08 16:47:06,388 Sleeping for 5s. Reason: RUNNING
2024-12-08 16:47:11,638 Sleeping for 7s. Reason: RUNNING
2024-12-08 16:47:18,895 Sleeping for 10s. Reason: RUNNING
2024-12-08 16:47:29,151 Sleeping for 6s. Reason: RUNNING
2024-12-08 16:47:35,405 Sleeping for 8s. Reason: RUNNING
2024-12-08 16:47:43,669 Sleeping for 6s. Reason: RUNNING
2024-12-08 16:47:49,928 Sleeping for 10s. Reason: RUNNING
2024-12-08 16:48:00,186 Sleeping for 9s. Reason: RUNNING
2024-12-08 16:48:09,454 Sleeping for 6s. Reason: RUNNING
2024-12-08 16:48:15,709 Sleeping for 9s. Reason: RUNNING
2024-12-08 16:48:24,971 Sleeping for 5s. Reason: RUNNING
2024-12-08 16:48:30,221 Sleeping for 8s. Reason: RUNNING
2024-12-08 16:48:38,479 Sleeping for 8s. Reason: RUNNING
2024-12-08 16:48:46,745 Sleeping for 5s. Reason: RUNNING
2024-12-08 16:48:52,013 Sleeping for 8s. Reason: RUNNING
2024-12-08 16:49:00,276 Sleeping for 8s. Reason: RUNNING
2024-12-08 16:49:08,536 Sleeping for 9s. Reason: RUNNING
2024-12-08 16:49:22,729 Setting max_seq=508, max_extra_seq=2048
2024-12-08 16:51:57,077 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=63.8 pTM=0.417 ipTM=0.154
2024-12-08 16:52:37,830 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=63.4 pTM=0.421 ipTM=0.162 tol=9.66
2024-12-08 16:53:18,657 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=63.6 pTM=0.42 ipTM=0.164 tol=8.16
2024-12-08 16:53:59,530 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=64.3 pTM=0.425 ipTM=0.164 tol=4.55
2024-12-08 16:54:40,419 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=64.3 pTM=0.427 ipTM=0.171 tol=3.31
2024-12-08 16:55:21,327 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=64.4 pTM=0.427 ipTM=0.169 tol=3.66
2024-12-08 16:56:02,254 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=64.2 pTM=0.424 ipTM=0.174 tol=2.92
2024-12-08 16:56:43,176 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=64.4 pTM=0.428 ipTM=0.171 tol=5.03
2024-12-08 16:57:24,083 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64.1 pTM=0.425 ipTM=0.17 tol=3.68
2024-12-08 16:58:05,021 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64.3 pTM=0.427 ipTM=0.169 tol=4.29
2024-12-08 16:58:45,977 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=64.9 pTM=0.431 ipTM=0.169 tol=4.2
2024-12-08 16:59:26,917 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=64.6 pTM=0.429 ipTM=0.168 tol=3.49
2024-12-08 17:00:07,860 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=64.4 pTM=0.427 ipTM=0.168 tol=3.54
2024-12-08 17:00:48,815 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=64.6 pTM=0.428 ipTM=0.169 tol=4.01
2024-12-08 17:01:29,762 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=64.5 pTM=0.428 ipTM=0.171 tol=3.73
2024-12-08 17:02:10,704 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=64.6 pTM=0.429 ipTM=0.173 tol=4.92
2024-12-08 17:02:51,640 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=64.8 pTM=0.43 ipTM=0.171 tol=4.21
2024-12-08 17:03:32,566 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=64.8 pTM=0.429 ipTM=0.171 tol=4.53
2024-12-08 17:04:13,473 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.9 pTM=0.43 ipTM=0.17 tol=3.2
2024-12-08 17:04:54,376 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=64.9 pTM=0.43 ipTM=0.171 tol=4.1
2024-12-08 17:05:35,306 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=64.7 pTM=0.427 ipTM=0.17 tol=4.27
2024-12-08 17:06:16,229 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64.7 pTM=0.426 ipTM=0.171 tol=3.84
2024-12-08 17:06:57,157 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64.8 pTM=0.427 ipTM=0.172 tol=4.8
2024-12-08 17:07:38,077 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=64.9 pTM=0.43 ipTM=0.171 tol=5.03
2024-12-08 17:08:18,984 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=64.7 pTM=0.428 ipTM=0.172 tol=3.56
2024-12-08 17:08:59,906 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.6 pTM=0.428 ipTM=0.171 tol=3.39
2024-12-08 17:09:40,832 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=64.4 pTM=0.426 ipTM=0.169 tol=4.39
2024-12-08 17:10:21,770 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=64.3 pTM=0.426 ipTM=0.172 tol=2.74
2024-12-08 17:11:02,693 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=64.6 pTM=0.428 ipTM=0.171 tol=3.75
2024-12-08 17:11:43,611 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=64.8 pTM=0.429 ipTM=0.172 tol=5.84
2024-12-08 17:12:24,548 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=64.5 pTM=0.427 ipTM=0.169 tol=4.21
2024-12-08 17:12:24,549 alphafold2_multimer_v3_model_1_seed_000 took 1377.1s (30 recycles)
2024-12-08 17:13:06,491 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=62.7 pTM=0.412 ipTM=0.17
2024-12-08 17:13:47,462 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=63.8 pTM=0.417 ipTM=0.166 tol=14
2024-12-08 17:14:28,437 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=64.5 pTM=0.422 ipTM=0.176 tol=8.41
2024-12-08 17:15:09,410 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=65.1 pTM=0.427 ipTM=0.192 tol=8.61
2024-12-08 17:15:50,425 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=65.3 pTM=0.429 ipTM=0.193 tol=8.01
2024-12-08 17:16:31,447 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=65.4 pTM=0.429 ipTM=0.19 tol=5.34
2024-12-08 17:17:12,481 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=65.4 pTM=0.426 ipTM=0.19 tol=6.04
2024-12-08 17:17:53,489 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=65.8 pTM=0.429 ipTM=0.176 tol=5.68
2024-12-08 17:18:34,501 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=65.5 pTM=0.427 ipTM=0.174 tol=4.04
2024-12-08 17:19:15,485 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=65.4 pTM=0.426 ipTM=0.173 tol=2.73
2024-12-08 17:19:56,484 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=65.6 pTM=0.427 ipTM=0.18 tol=2.38
2024-12-08 17:20:37,489 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=65.5 pTM=0.425 ipTM=0.188 tol=2.08
2024-12-08 17:21:18,490 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=65.4 pTM=0.425 ipTM=0.184 tol=2.21
2024-12-08 17:21:59,490 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=65.5 pTM=0.429 ipTM=0.179 tol=2.13
2024-12-08 17:22:40,453 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=65.3 pTM=0.424 ipTM=0.178 tol=1.86
2024-12-08 17:23:21,425 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=65.4 pTM=0.424 ipTM=0.175 tol=1.77
2024-12-08 17:24:02,412 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=65.5 pTM=0.425 ipTM=0.173 tol=1.81
2024-12-08 17:24:43,398 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=65.4 pTM=0.426 ipTM=0.181 tol=1.77
2024-12-08 17:25:24,401 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=65.6 pTM=0.428 ipTM=0.182 tol=1.94
2024-12-08 17:26:05,402 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=65.4 pTM=0.426 ipTM=0.176 tol=2.06
2024-12-08 17:26:46,412 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=65.5 pTM=0.427 ipTM=0.175 tol=2.04
2024-12-08 17:27:27,429 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=65.7 pTM=0.427 ipTM=0.18 tol=1.94
2024-12-08 17:28:08,413 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=65.4 pTM=0.425 ipTM=0.183 tol=1.73
2024-12-08 17:28:49,404 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=65.6 pTM=0.427 ipTM=0.187 tol=2
2024-12-08 17:29:30,418 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=65.8 pTM=0.429 ipTM=0.184 tol=1.99
2024-12-08 17:30:11,404 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=65.5 pTM=0.426 ipTM=0.171 tol=1.84
2024-12-08 17:30:52,420 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=65.2 pTM=0.423 ipTM=0.171 tol=1.62
2024-12-08 17:31:33,444 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=65.2 pTM=0.423 ipTM=0.17 tol=2.04
2024-12-08 17:32:14,442 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=65.4 pTM=0.427 ipTM=0.172 tol=2.8
2024-12-08 17:32:55,430 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=65.5 pTM=0.426 ipTM=0.176 tol=2.75
2024-12-08 17:33:36,431 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=65.3 pTM=0.428 ipTM=0.184 tol=4.51
2024-12-08 17:33:36,432 alphafold2_multimer_v3_model_2_seed_000 took 1270.9s (30 recycles)
2024-12-08 17:34:18,550 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=65.4 pTM=0.433 ipTM=0.155
2024-12-08 17:34:59,635 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=65.5 pTM=0.419 ipTM=0.197 tol=10.9
2024-12-08 17:35:40,708 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=65.9 pTM=0.421 ipTM=0.196 tol=8.74
2024-12-08 17:36:21,735 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=66 pTM=0.424 ipTM=0.173 tol=9.23
2024-12-08 17:37:02,774 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=65.6 pTM=0.42 ipTM=0.155 tol=9.66
2024-12-08 17:37:43,812 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=65.8 pTM=0.422 ipTM=0.172 tol=6.03
2024-12-08 17:38:24,833 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=65.6 pTM=0.421 ipTM=0.185 tol=3.41
2024-12-08 17:39:05,880 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=65.7 pTM=0.423 ipTM=0.177 tol=2.99
2024-12-08 17:39:46,932 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=65.7 pTM=0.421 ipTM=0.174 tol=5.54
2024-12-08 17:40:27,984 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=65.8 pTM=0.422 ipTM=0.158 tol=4.47
2024-12-08 17:41:09,038 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=65.9 pTM=0.422 ipTM=0.174 tol=4.59
2024-12-08 17:41:50,103 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=65.9 pTM=0.423 ipTM=0.175 tol=4.66
2024-12-08 17:42:31,162 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=65.7 pTM=0.421 ipTM=0.165 tol=3.71
2024-12-08 17:43:12,214 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=65.7 pTM=0.421 ipTM=0.162 tol=3.58
2024-12-08 17:43:53,278 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=65.6 pTM=0.419 ipTM=0.164 tol=3.19
2024-12-08 17:44:34,342 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=65.6 pTM=0.42 ipTM=0.17 tol=3.02
2024-12-08 17:45:15,412 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=65.6 pTM=0.42 ipTM=0.165 tol=4.94
2024-12-08 17:45:56,475 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=65.6 pTM=0.42 ipTM=0.176 tol=3.25
2024-12-08 17:46:37,540 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=65.6 pTM=0.419 ipTM=0.169 tol=2.97
2024-12-08 17:47:18,600 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=65.4 pTM=0.419 ipTM=0.155 tol=3.91
2024-12-08 17:47:59,627 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=65.4 pTM=0.42 ipTM=0.173 tol=5.02
2024-12-08 17:48:40,659 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=65.4 pTM=0.421 ipTM=0.18 tol=6.48
2024-12-08 17:49:21,700 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=65.4 pTM=0.422 ipTM=0.182 tol=5.66
2024-12-08 17:50:02,763 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=65.4 pTM=0.423 ipTM=0.179 tol=3.71
2024-12-08 17:50:43,797 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=65.6 pTM=0.423 ipTM=0.184 tol=3.6
2024-12-08 17:51:24,830 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=65.3 pTM=0.419 ipTM=0.162 tol=4.54
2024-12-08 17:52:05,878 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=65.4 pTM=0.42 ipTM=0.154 tol=3.48
2024-12-08 17:52:46,959 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=65.4 pTM=0.419 ipTM=0.153 tol=3.33
2024-12-08 17:53:28,032 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=65.3 pTM=0.421 ipTM=0.171 tol=4.84
2024-12-08 17:54:09,092 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=65.4 pTM=0.422 ipTM=0.183 tol=6.79
2024-12-08 17:54:50,161 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=65.4 pTM=0.419 ipTM=0.174 tol=5.32
2024-12-08 17:54:50,162 alphafold2_multimer_v3_model_3_seed_000 took 1272.7s (30 recycles)
2024-12-08 17:55:32,158 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=61.2 pTM=0.432 ipTM=0.201
2024-12-08 17:56:13,212 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=62.5 pTM=0.414 ipTM=0.152 tol=12.2
2024-12-08 17:56:54,240 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=63.4 pTM=0.431 ipTM=0.17 tol=14.4
2024-12-08 17:57:35,244 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=63.6 pTM=0.437 ipTM=0.176 tol=10.4
2024-12-08 17:58:16,221 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=63.3 pTM=0.435 ipTM=0.191 tol=9.01
2024-12-08 17:58:57,205 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=63.6 pTM=0.438 ipTM=0.172 tol=3.83
2024-12-08 17:59:38,236 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=63.8 pTM=0.437 ipTM=0.171 tol=3.8
2024-12-08 18:00:19,286 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=63.7 pTM=0.438 ipTM=0.172 tol=4.77
2024-12-08 18:01:00,324 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=63.8 pTM=0.439 ipTM=0.175 tol=6.86
2024-12-08 18:01:41,313 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=63.6 pTM=0.439 ipTM=0.171 tol=5.91
2024-12-08 18:02:22,323 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=63.6 pTM=0.441 ipTM=0.173 tol=5.36
2024-12-08 18:03:03,310 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=63.5 pTM=0.442 ipTM=0.174 tol=7.29
2024-12-08 18:03:44,301 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=63.6 pTM=0.444 ipTM=0.171 tol=6.16
2024-12-08 18:04:25,292 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=63.4 pTM=0.442 ipTM=0.171 tol=6.91
2024-12-08 18:05:06,279 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=63.6 pTM=0.44 ipTM=0.165 tol=6.46
2024-12-08 18:05:47,274 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=63.6 pTM=0.441 ipTM=0.17 tol=10.1
2024-12-08 18:06:28,281 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=64 pTM=0.442 ipTM=0.174 tol=7.16
2024-12-08 18:07:09,265 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=63.8 pTM=0.447 ipTM=0.183 tol=4.5
2024-12-08 18:07:50,259 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=63.6 pTM=0.444 ipTM=0.172 tol=5.1
2024-12-08 18:08:31,208 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=63.4 pTM=0.442 ipTM=0.17 tol=4.2
2024-12-08 18:09:12,178 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=63.4 pTM=0.44 ipTM=0.166 tol=4.82
2024-12-08 18:09:53,138 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=63.6 pTM=0.444 ipTM=0.173 tol=8.27
2024-12-08 18:10:34,107 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=63.7 pTM=0.444 ipTM=0.17 tol=6.56
2024-12-08 18:11:15,099 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=63.7 pTM=0.447 ipTM=0.172 tol=5
2024-12-08 18:11:56,062 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=63.6 pTM=0.446 ipTM=0.171 tol=5.89
2024-12-08 18:12:37,035 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=63.2 pTM=0.444 ipTM=0.169 tol=9.34
2024-12-08 18:13:18,012 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=63.3 pTM=0.444 ipTM=0.172 tol=10.8
2024-12-08 18:13:58,990 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=63.4 pTM=0.442 ipTM=0.168 tol=10.4
2024-12-08 18:14:39,970 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=63.3 pTM=0.444 ipTM=0.169 tol=8.01
2024-12-08 18:15:20,958 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=63.6 pTM=0.443 ipTM=0.168 tol=6.74
2024-12-08 18:16:01,937 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=63.5 pTM=0.442 ipTM=0.167 tol=3.12
2024-12-08 18:16:01,938 alphafold2_multimer_v3_model_4_seed_000 took 1270.8s (30 recycles)
2024-12-08 18:16:43,964 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=64 pTM=0.43 ipTM=0.168
2024-12-08 18:17:25,098 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=64.6 pTM=0.415 ipTM=0.22 tol=17.8
2024-12-08 18:18:06,183 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=65.4 pTM=0.425 ipTM=0.218 tol=8.8
2024-12-08 18:18:47,262 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=65.5 pTM=0.426 ipTM=0.208 tol=7.32
2024-12-08 18:19:28,334 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=65.4 pTM=0.426 ipTM=0.215 tol=8.48
2024-12-08 18:20:09,401 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=65.5 pTM=0.427 ipTM=0.218 tol=6.56
2024-12-08 18:20:50,460 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=65.4 pTM=0.424 ipTM=0.222 tol=3.44
2024-12-08 18:21:31,532 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=65.5 pTM=0.426 ipTM=0.209 tol=3.04
2024-12-08 18:22:12,595 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=65.4 pTM=0.425 ipTM=0.207 tol=3.84
2024-12-08 18:22:53,659 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=65.6 pTM=0.426 ipTM=0.202 tol=2.49
2024-12-08 18:23:34,722 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=65.5 pTM=0.425 ipTM=0.208 tol=3.39
2024-12-08 18:24:15,800 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=65.6 pTM=0.426 ipTM=0.211 tol=2.4
2024-12-08 18:24:56,855 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=65.4 pTM=0.425 ipTM=0.208 tol=4.96
2024-12-08 18:25:37,904 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=65.4 pTM=0.427 ipTM=0.21 tol=4.93
2024-12-08 18:26:18,964 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=65.5 pTM=0.427 ipTM=0.211 tol=4.64
2024-12-08 18:26:59,994 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=65.5 pTM=0.427 ipTM=0.215 tol=5.52
2024-12-08 18:27:41,007 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=65.6 pTM=0.427 ipTM=0.212 tol=6.96
2024-12-08 18:28:22,015 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=65.6 pTM=0.425 ipTM=0.213 tol=7.2
2024-12-08 18:29:03,031 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=65.5 pTM=0.426 ipTM=0.205 tol=3.68
2024-12-08 18:29:44,065 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=65.4 pTM=0.426 ipTM=0.204 tol=2.44
2024-12-08 18:30:25,143 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=65.4 pTM=0.425 ipTM=0.207 tol=4.67
2024-12-08 18:31:06,211 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=65.5 pTM=0.426 ipTM=0.207 tol=4.71
2024-12-08 18:31:47,265 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=65.6 pTM=0.426 ipTM=0.214 tol=4.92
2024-12-08 18:32:28,290 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=65.7 pTM=0.427 ipTM=0.215 tol=2.55
2024-12-08 18:33:09,322 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=65.7 pTM=0.427 ipTM=0.211 tol=3.94
2024-12-08 18:33:50,339 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=65.3 pTM=0.424 ipTM=0.2 tol=6.34
2024-12-08 18:34:31,378 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=65.3 pTM=0.424 ipTM=0.197 tol=2.83
2024-12-08 18:35:12,409 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=65.2 pTM=0.425 ipTM=0.204 tol=4.29
2024-12-08 18:35:53,454 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=65.4 pTM=0.425 ipTM=0.219 tol=6.89
2024-12-08 18:36:34,502 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=65.4 pTM=0.426 ipTM=0.215 tol=3.67
2024-12-08 18:37:15,556 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=65.4 pTM=0.425 ipTM=0.209 tol=5.14
2024-12-08 18:37:15,557 alphafold2_multimer_v3_model_5_seed_000 took 1272.6s (30 recycles)
2024-12-08 18:37:16,554 reranking models by 'multimer' metric
2024-12-08 18:37:20,236 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 18:39:03,377 Relaxation took 106.8s
2024-12-08 18:39:03,377 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=65.4 pTM=0.425 ipTM=0.209
2024-12-08 18:40:51,721 Relaxation took 108.3s
2024-12-08 18:40:51,722 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=65.3 pTM=0.428 ipTM=0.184
2024-12-08 18:43:13,119 Relaxation took 141.4s
2024-12-08 18:43:13,119 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=65.4 pTM=0.419 ipTM=0.174
2024-12-08 18:45:30,448 Relaxation took 137.3s
2024-12-08 18:45:30,448 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=63.5 pTM=0.442 ipTM=0.167
2024-12-08 18:48:12,644 Relaxation took 162.2s
2024-12-08 18:48:12,644 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=64.5 pTM=0.427 ipTM=0.169
2024-12-08 18:48:15,451 Done