2024-12-08 17:03:48,841 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 17:03:49,191 Running on GPU
2024-12-08 17:03:51,365 Found 6 citations for tools or databases
2024-12-08 17:03:51,365 Query 1/1: TLE2_RIPPLY1 (length 894)
2024-12-08 17:03:51,627 Sleeping for 7s. Reason: PENDING
2024-12-08 17:03:58,885 Sleeping for 7s. Reason: RUNNING
2024-12-08 17:04:06,146 Sleeping for 6s. Reason: RUNNING
2024-12-08 17:04:12,414 Sleeping for 9s. Reason: RUNNING
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2024-12-08 17:04:31,945 Sleeping for 6s. Reason: RUNNING
2024-12-08 17:04:38,208 Sleeping for 10s. Reason: RUNNING
2024-12-08 17:04:48,479 Sleeping for 7s. Reason: RUNNING
2024-12-08 17:04:55,730 Sleeping for 6s. Reason: RUNNING
2024-12-08 17:05:01,991 Sleeping for 9s. Reason: RUNNING
2024-12-08 17:05:11,250 Sleeping for 8s. Reason: RUNNING
2024-12-08 17:05:19,508 Sleeping for 6s. Reason: RUNNING
2024-12-08 17:05:25,763 Sleeping for 7s. Reason: RUNNING
2024-12-08 17:05:33,018 Sleeping for 7s. Reason: RUNNING
2024-12-08 17:05:40,275 Sleeping for 10s. Reason: RUNNING
2024-12-08 17:05:50,538 Sleeping for 10s. Reason: RUNNING
2024-12-08 17:06:00,803 Sleeping for 9s. Reason: RUNNING
2024-12-08 17:06:10,063 Sleeping for 9s. Reason: RUNNING
2024-12-08 17:06:20,778 Sleeping for 6s. Reason: PENDING
2024-12-08 17:06:27,033 Sleeping for 5s. Reason: PENDING
2024-12-08 17:06:32,299 Sleeping for 5s. Reason: PENDING
2024-12-08 17:06:37,551 Sleeping for 6s. Reason: PENDING
2024-12-08 17:06:43,809 Sleeping for 6s. Reason: PENDING
2024-12-08 17:06:50,068 Sleeping for 7s. Reason: PENDING
2024-12-08 17:06:57,336 Sleeping for 7s. Reason: PENDING
2024-12-08 17:07:04,605 Sleeping for 5s. Reason: PENDING
2024-12-08 17:07:09,858 Sleeping for 6s. Reason: PENDING
2024-12-08 17:07:16,114 Sleeping for 8s. Reason: PENDING
2024-12-08 17:07:24,373 Sleeping for 6s. Reason: RUNNING
2024-12-08 17:07:30,633 Sleeping for 7s. Reason: RUNNING
2024-12-08 17:07:37,896 Sleeping for 8s. Reason: RUNNING
2024-12-08 17:07:46,176 Sleeping for 10s. Reason: RUNNING
2024-12-08 17:07:56,453 Sleeping for 7s. Reason: RUNNING
2024-12-08 17:08:03,710 Sleeping for 9s. Reason: RUNNING
2024-12-08 17:08:12,978 Sleeping for 9s. Reason: RUNNING
2024-12-08 17:08:22,255 Sleeping for 7s. Reason: RUNNING
2024-12-08 17:08:29,508 Sleeping for 10s. Reason: RUNNING
2024-12-08 17:08:39,772 Sleeping for 6s. Reason: RUNNING
2024-12-08 17:08:46,030 Sleeping for 6s. Reason: RUNNING
2024-12-08 17:08:54,736 Setting max_seq=508, max_extra_seq=2048
2024-12-08 17:12:18,277 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=52 pTM=0.467 ipTM=0.399
2024-12-08 17:12:39,274 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=53.3 pTM=0.452 ipTM=0.456 tol=20.7
2024-12-08 17:13:00,251 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=54.3 pTM=0.457 ipTM=0.468 tol=10.5
2024-12-08 17:13:21,254 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=54.2 pTM=0.454 ipTM=0.468 tol=5.48
2024-12-08 17:13:42,277 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=54.6 pTM=0.458 ipTM=0.47 tol=6.54
2024-12-08 17:14:03,331 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=54.2 pTM=0.455 ipTM=0.468 tol=6.37
2024-12-08 17:14:24,405 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=54.5 pTM=0.457 ipTM=0.468 tol=5.28
2024-12-08 17:14:45,477 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=54.5 pTM=0.457 ipTM=0.468 tol=3.34
2024-12-08 17:15:06,566 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=54.8 pTM=0.458 ipTM=0.468 tol=3.59
2024-12-08 17:15:27,660 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=54.8 pTM=0.456 ipTM=0.467 tol=2.82
2024-12-08 17:15:48,767 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=55 pTM=0.458 ipTM=0.467 tol=3.01
2024-12-08 17:16:09,885 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=55 pTM=0.458 ipTM=0.468 tol=2.52
2024-12-08 17:16:31,016 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=54.8 pTM=0.458 ipTM=0.468 tol=2.86
2024-12-08 17:16:52,170 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=55 pTM=0.458 ipTM=0.466 tol=2.16
2024-12-08 17:17:13,349 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=54.9 pTM=0.458 ipTM=0.466 tol=4.19
2024-12-08 17:17:34,546 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=54.9 pTM=0.457 ipTM=0.468 tol=3.9
2024-12-08 17:17:55,757 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=54.8 pTM=0.458 ipTM=0.467 tol=3.22
2024-12-08 17:18:16,917 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=54.8 pTM=0.458 ipTM=0.466 tol=3.28
2024-12-08 17:18:38,064 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=54.6 pTM=0.458 ipTM=0.467 tol=5.57
2024-12-08 17:18:59,202 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=54.7 pTM=0.458 ipTM=0.466 tol=5.32
2024-12-08 17:19:20,349 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=54.6 pTM=0.459 ipTM=0.466 tol=2.83
2024-12-08 17:19:41,525 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=54.6 pTM=0.458 ipTM=0.467 tol=2.03
2024-12-08 17:20:02,660 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=54.8 pTM=0.458 ipTM=0.466 tol=2.63
2024-12-08 17:20:23,779 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=54.6 pTM=0.458 ipTM=0.468 tol=4.93
2024-12-08 17:20:44,916 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=54.7 pTM=0.458 ipTM=0.466 tol=4.55
2024-12-08 17:21:06,043 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=54.6 pTM=0.459 ipTM=0.468 tol=2.74
2024-12-08 17:21:27,158 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=54.7 pTM=0.458 ipTM=0.466 tol=2.59
2024-12-08 17:21:48,283 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=55 pTM=0.458 ipTM=0.467 tol=2.11
2024-12-08 17:22:09,386 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=54.8 pTM=0.458 ipTM=0.466 tol=3.01
2024-12-08 17:22:30,490 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=54.7 pTM=0.459 ipTM=0.467 tol=2.2
2024-12-08 17:22:51,609 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=54.7 pTM=0.459 ipTM=0.467 tol=2.5
2024-12-08 17:22:51,610 alphafold2_multimer_v3_model_1_seed_000 took 830.4s (30 recycles)
2024-12-08 17:23:13,387 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=51.8 pTM=0.455 ipTM=0.433
2024-12-08 17:23:34,557 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=53.3 pTM=0.465 ipTM=0.473 tol=18.2
2024-12-08 17:23:55,720 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=53.5 pTM=0.455 ipTM=0.468 tol=13.5
2024-12-08 17:24:16,892 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=53.5 pTM=0.453 ipTM=0.467 tol=4.64
2024-12-08 17:24:38,059 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=54 pTM=0.453 ipTM=0.468 tol=6.2
2024-12-08 17:24:59,236 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=53.6 pTM=0.453 ipTM=0.468 tol=5.13
2024-12-08 17:25:20,427 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=54.1 pTM=0.454 ipTM=0.467 tol=4.56
2024-12-08 17:25:41,596 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=53.9 pTM=0.454 ipTM=0.468 tol=5.24
2024-12-08 17:26:02,756 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=54.4 pTM=0.456 ipTM=0.469 tol=3.32
2024-12-08 17:26:23,915 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=54.3 pTM=0.455 ipTM=0.469 tol=3.63
2024-12-08 17:26:45,071 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=54.4 pTM=0.455 ipTM=0.469 tol=2.58
2024-12-08 17:27:06,215 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=54.2 pTM=0.456 ipTM=0.469 tol=2.27
2024-12-08 17:27:27,380 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=54.5 pTM=0.456 ipTM=0.468 tol=2.37
2024-12-08 17:27:48,531 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=54.5 pTM=0.457 ipTM=0.47 tol=3.01
2024-12-08 17:28:09,681 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=54.5 pTM=0.457 ipTM=0.469 tol=1.88
2024-12-08 17:28:30,837 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=54.5 pTM=0.455 ipTM=0.469 tol=2.1
2024-12-08 17:28:52,005 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=54.5 pTM=0.457 ipTM=0.468 tol=1.91
2024-12-08 17:29:13,158 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=54.3 pTM=0.456 ipTM=0.467 tol=1.43
2024-12-08 17:29:34,321 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=54.5 pTM=0.456 ipTM=0.468 tol=1.91
2024-12-08 17:29:55,477 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=54.4 pTM=0.456 ipTM=0.468 tol=2.08
2024-12-08 17:30:16,639 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=54.6 pTM=0.457 ipTM=0.468 tol=3.1
2024-12-08 17:30:37,789 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=54.6 pTM=0.458 ipTM=0.47 tol=2.68
2024-12-08 17:30:58,942 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=54.6 pTM=0.458 ipTM=0.468 tol=1.98
2024-12-08 17:31:20,091 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=54.4 pTM=0.458 ipTM=0.47 tol=2.29
2024-12-08 17:31:41,246 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=54.8 pTM=0.46 ipTM=0.471 tol=2.81
2024-12-08 17:32:02,398 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=54.7 pTM=0.461 ipTM=0.472 tol=1.54
2024-12-08 17:32:23,555 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=54.7 pTM=0.46 ipTM=0.471 tol=2.31
2024-12-08 17:32:44,717 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=54.6 pTM=0.46 ipTM=0.472 tol=2.04
2024-12-08 17:33:05,888 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=54.6 pTM=0.46 ipTM=0.472 tol=2.64
2024-12-08 17:33:27,047 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=54.5 pTM=0.461 ipTM=0.472 tol=2.84
2024-12-08 17:33:48,204 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=54.7 pTM=0.461 ipTM=0.472 tol=3.3
2024-12-08 17:33:48,206 alphafold2_multimer_v3_model_2_seed_000 took 656.0s (30 recycles)
2024-12-08 17:34:10,069 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=51.6 pTM=0.451 ipTM=0.256
2024-12-08 17:34:31,315 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=56.1 pTM=0.5 ipTM=0.462 tol=23.3
2024-12-08 17:34:52,520 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=56.7 pTM=0.496 ipTM=0.48 tol=11.7
2024-12-08 17:35:13,746 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=57.5 pTM=0.506 ipTM=0.498 tol=4.07
2024-12-08 17:35:34,985 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=57.8 pTM=0.507 ipTM=0.498 tol=2.39
2024-12-08 17:35:56,232 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=57.5 pTM=0.507 ipTM=0.495 tol=1.87
2024-12-08 17:36:17,522 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=57.8 pTM=0.509 ipTM=0.499 tol=1.37
2024-12-08 17:36:38,827 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=57.6 pTM=0.507 ipTM=0.494 tol=1.21
2024-12-08 17:37:00,092 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=57.9 pTM=0.508 ipTM=0.498 tol=1.07
2024-12-08 17:37:21,377 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=57.7 pTM=0.507 ipTM=0.49 tol=1.13
2024-12-08 17:37:42,648 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=58.1 pTM=0.508 ipTM=0.497 tol=1.34
2024-12-08 17:38:03,922 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=58 pTM=0.508 ipTM=0.498 tol=1.57
2024-12-08 17:38:25,187 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=58.2 pTM=0.508 ipTM=0.499 tol=1.25
2024-12-08 17:38:46,454 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=58.1 pTM=0.507 ipTM=0.491 tol=1.61
2024-12-08 17:39:07,700 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=58.4 pTM=0.51 ipTM=0.502 tol=2.01
2024-12-08 17:39:28,964 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=58.3 pTM=0.51 ipTM=0.498 tol=2.32
2024-12-08 17:39:50,206 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=58.4 pTM=0.51 ipTM=0.505 tol=2
2024-12-08 17:40:11,442 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=58.3 pTM=0.508 ipTM=0.498 tol=1.88
2024-12-08 17:40:32,667 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=58.4 pTM=0.51 ipTM=0.503 tol=1.67
2024-12-08 17:40:53,885 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=58.3 pTM=0.509 ipTM=0.496 tol=1.41
2024-12-08 17:41:15,155 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=58.4 pTM=0.511 ipTM=0.502 tol=1.12
2024-12-08 17:41:36,373 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=58.4 pTM=0.509 ipTM=0.497 tol=1.38
2024-12-08 17:41:57,605 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=58.4 pTM=0.508 ipTM=0.497 tol=1.32
2024-12-08 17:42:18,830 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=58.6 pTM=0.51 ipTM=0.502 tol=0.963
2024-12-08 17:42:40,061 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=58.3 pTM=0.51 ipTM=0.498 tol=1.02
2024-12-08 17:43:01,293 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=58.5 pTM=0.509 ipTM=0.5 tol=0.772
2024-12-08 17:43:22,533 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=58.4 pTM=0.509 ipTM=0.494 tol=1.11
2024-12-08 17:43:43,755 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=58.6 pTM=0.51 ipTM=0.499 tol=1.41
2024-12-08 17:44:04,985 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=58.5 pTM=0.509 ipTM=0.498 tol=1.27
2024-12-08 17:44:26,221 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=58.6 pTM=0.509 ipTM=0.502 tol=0.843
2024-12-08 17:44:47,440 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=58.5 pTM=0.509 ipTM=0.498 tol=1.22
2024-12-08 17:44:47,441 alphafold2_multimer_v3_model_3_seed_000 took 658.6s (30 recycles)
2024-12-08 17:45:09,320 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=52.3 pTM=0.483 ipTM=0.428
2024-12-08 17:45:30,573 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=53.4 pTM=0.478 ipTM=0.48 tol=15.6
2024-12-08 17:45:51,797 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=53.7 pTM=0.485 ipTM=0.483 tol=9.06
2024-12-08 17:46:13,023 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=52.5 pTM=0.465 ipTM=0.479 tol=5.78
2024-12-08 17:46:34,292 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=53.3 pTM=0.47 ipTM=0.48 tol=17.8
2024-12-08 17:46:55,502 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=55.2 pTM=0.5 ipTM=0.488 tol=11.4
2024-12-08 17:47:16,738 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=55.4 pTM=0.5 ipTM=0.505 tol=7.12
2024-12-08 17:47:37,978 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=56.1 pTM=0.501 ipTM=0.513 tol=5.45
2024-12-08 17:47:59,205 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=55.9 pTM=0.501 ipTM=0.509 tol=4.45
2024-12-08 17:48:20,441 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=56.3 pTM=0.502 ipTM=0.513 tol=8.81
2024-12-08 17:48:41,657 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=56.2 pTM=0.502 ipTM=0.509 tol=9.06
2024-12-08 17:49:02,884 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=56.3 pTM=0.504 ipTM=0.513 tol=8.51
2024-12-08 17:49:24,125 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=56.2 pTM=0.503 ipTM=0.511 tol=8.31
2024-12-08 17:49:45,358 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=56.4 pTM=0.503 ipTM=0.517 tol=5.69
2024-12-08 17:50:06,585 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=56.3 pTM=0.503 ipTM=0.52 tol=5.56
2024-12-08 17:50:27,841 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=56.7 pTM=0.503 ipTM=0.52 tol=4.35
2024-12-08 17:50:49,099 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=56.3 pTM=0.504 ipTM=0.521 tol=5.99
2024-12-08 17:51:10,354 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=56.7 pTM=0.503 ipTM=0.521 tol=5.71
2024-12-08 17:51:31,603 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=56.4 pTM=0.503 ipTM=0.521 tol=2.9
2024-12-08 17:51:52,839 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=56.6 pTM=0.503 ipTM=0.523 tol=2.49
2024-12-08 17:52:14,079 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=56.2 pTM=0.504 ipTM=0.521 tol=3.54
2024-12-08 17:52:35,324 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=56.4 pTM=0.503 ipTM=0.521 tol=4.05
2024-12-08 17:52:56,571 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=56.3 pTM=0.504 ipTM=0.52 tol=3.26
2024-12-08 17:53:17,817 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=56.3 pTM=0.503 ipTM=0.522 tol=3.33
2024-12-08 17:53:39,051 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=56.2 pTM=0.504 ipTM=0.52 tol=2.73
2024-12-08 17:54:00,298 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=56.7 pTM=0.504 ipTM=0.528 tol=6.27
2024-12-08 17:54:21,523 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=56.6 pTM=0.504 ipTM=0.522 tol=6.32
2024-12-08 17:54:42,768 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=56.7 pTM=0.504 ipTM=0.525 tol=2.46
2024-12-08 17:55:04,003 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=56.7 pTM=0.505 ipTM=0.524 tol=1.84
2024-12-08 17:55:25,244 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=57 pTM=0.504 ipTM=0.525 tol=2.16
2024-12-08 17:55:46,477 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=56.8 pTM=0.504 ipTM=0.522 tol=2
2024-12-08 17:55:46,478 alphafold2_multimer_v3_model_4_seed_000 took 658.4s (30 recycles)
2024-12-08 17:56:08,349 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=50.6 pTM=0.451 ipTM=0.272
2024-12-08 17:56:29,580 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=54.9 pTM=0.491 ipTM=0.453 tol=18.9
2024-12-08 17:56:50,812 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=55.9 pTM=0.498 ipTM=0.483 tol=11.3
2024-12-08 17:57:12,022 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=56.4 pTM=0.5 ipTM=0.485 tol=5.43
2024-12-08 17:57:33,239 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=56.2 pTM=0.497 ipTM=0.483 tol=5.11
2024-12-08 17:57:54,447 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=56.5 pTM=0.501 ipTM=0.486 tol=5.02
2024-12-08 17:58:15,667 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=56.4 pTM=0.499 ipTM=0.483 tol=3
2024-12-08 17:58:36,875 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=56.7 pTM=0.503 ipTM=0.486 tol=5.13
2024-12-08 17:58:58,090 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=56.6 pTM=0.501 ipTM=0.485 tol=7.05
2024-12-08 17:59:19,300 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=56.7 pTM=0.502 ipTM=0.486 tol=5.39
2024-12-08 17:59:40,505 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=56.6 pTM=0.501 ipTM=0.485 tol=3.17
2024-12-08 18:00:01,711 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=56.5 pTM=0.503 ipTM=0.486 tol=3.5
2024-12-08 18:00:22,914 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=56.5 pTM=0.5 ipTM=0.484 tol=4.38
2024-12-08 18:00:44,116 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=56.6 pTM=0.501 ipTM=0.484 tol=3.87
2024-12-08 18:01:05,325 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=56.4 pTM=0.5 ipTM=0.484 tol=3.72
2024-12-08 18:01:26,530 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=57 pTM=0.504 ipTM=0.486 tol=2.99
2024-12-08 18:01:47,726 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=56.6 pTM=0.501 ipTM=0.483 tol=3.86
2024-12-08 18:02:08,927 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=56.7 pTM=0.5 ipTM=0.483 tol=2.37
2024-12-08 18:02:30,131 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=56.5 pTM=0.501 ipTM=0.484 tol=1.73
2024-12-08 18:02:51,338 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=56.6 pTM=0.5 ipTM=0.484 tol=4.77
2024-12-08 18:03:12,560 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=56.2 pTM=0.5 ipTM=0.483 tol=2.94
2024-12-08 18:03:33,763 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=56.6 pTM=0.501 ipTM=0.485 tol=4.5
2024-12-08 18:03:54,976 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=56.5 pTM=0.499 ipTM=0.485 tol=5.12
2024-12-08 18:04:16,192 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=56.5 pTM=0.501 ipTM=0.486 tol=3.13
2024-12-08 18:04:37,412 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=56.4 pTM=0.501 ipTM=0.485 tol=4.05
2024-12-08 18:04:58,624 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=56.7 pTM=0.503 ipTM=0.487 tol=4.86
2024-12-08 18:05:19,844 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=56.2 pTM=0.498 ipTM=0.484 tol=5.38
2024-12-08 18:05:41,075 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=57 pTM=0.508 ipTM=0.5 tol=4.48
2024-12-08 18:06:02,284 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=56.8 pTM=0.505 ipTM=0.497 tol=5.21
2024-12-08 18:06:23,498 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=57.2 pTM=0.505 ipTM=0.499 tol=8.71
2024-12-08 18:06:44,703 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=57.2 pTM=0.506 ipTM=0.498 tol=6.61
2024-12-08 18:06:44,704 alphafold2_multimer_v3_model_5_seed_000 took 657.6s (30 recycles)
2024-12-08 18:06:45,336 reranking models by 'multimer' metric
2024-12-08 18:06:48,873 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 18:08:02,482 Relaxation took 77.1s
2024-12-08 18:08:02,482 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=56.8 pTM=0.504 ipTM=0.522
2024-12-08 18:09:10,075 Relaxation took 67.6s
2024-12-08 18:09:10,075 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=58.5 pTM=0.509 ipTM=0.498
2024-12-08 18:10:45,149 Relaxation took 95.1s
2024-12-08 18:10:45,149 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=57.2 pTM=0.506 ipTM=0.498
2024-12-08 18:12:12,845 Relaxation took 87.7s
2024-12-08 18:12:12,845 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=54.7 pTM=0.461 ipTM=0.472
2024-12-08 18:13:26,966 Relaxation took 74.1s
2024-12-08 18:13:26,966 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=54.7 pTM=0.459 ipTM=0.467
2024-12-08 18:13:28,947 Done