2024-12-08 17:09:24,798 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 17:09:25,084 Running on GPU
2024-12-08 17:09:27,390 Found 6 citations for tools or databases
2024-12-08 17:09:27,390 Query 1/1: TLE3_ACTA1 (length 1149)
2024-12-08 17:09:27,679 Sleeping for 6s. Reason: PENDING
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2024-12-08 17:10:01,124 Sleeping for 5s. Reason: RUNNING
2024-12-08 17:10:06,380 Sleeping for 9s. Reason: RUNNING
2024-12-08 17:10:15,637 Sleeping for 7s. Reason: RUNNING
2024-12-08 17:10:22,895 Sleeping for 5s. Reason: RUNNING
2024-12-08 17:10:28,151 Sleeping for 6s. Reason: RUNNING
2024-12-08 17:10:34,406 Sleeping for 6s. Reason: RUNNING
2024-12-08 17:10:40,662 Sleeping for 10s. Reason: RUNNING
2024-12-08 17:10:50,924 Sleeping for 10s. Reason: RUNNING
2024-12-08 17:11:01,183 Sleeping for 7s. Reason: RUNNING
2024-12-08 17:11:08,450 Sleeping for 10s. Reason: RUNNING
2024-12-08 17:11:18,707 Sleeping for 6s. Reason: RUNNING
2024-12-08 17:11:24,959 Sleeping for 9s. Reason: RUNNING
2024-12-08 17:11:34,223 Sleeping for 10s. Reason: RUNNING
2024-12-08 17:11:44,490 Sleeping for 9s. Reason: RUNNING
2024-12-08 17:11:53,752 Sleeping for 9s. Reason: RUNNING
2024-12-08 17:12:03,006 Sleeping for 9s. Reason: RUNNING
2024-12-08 17:12:12,267 Sleeping for 10s. Reason: RUNNING
2024-12-08 17:12:24,535 Sleeping for 9s. Reason: PENDING
2024-12-08 17:12:33,797 Sleeping for 10s. Reason: RUNNING
2024-12-08 17:12:44,067 Sleeping for 10s. Reason: RUNNING
2024-12-08 17:12:54,477 Sleeping for 8s. Reason: RUNNING
2024-12-08 17:13:02,738 Sleeping for 8s. Reason: RUNNING
2024-12-08 17:13:10,994 Sleeping for 9s. Reason: RUNNING
2024-12-08 17:13:20,251 Sleeping for 8s. Reason: RUNNING
2024-12-08 17:13:28,512 Sleeping for 5s. Reason: RUNNING
2024-12-08 17:13:33,765 Sleeping for 6s. Reason: RUNNING
2024-12-08 17:13:40,022 Sleeping for 7s. Reason: RUNNING
2024-12-08 17:13:47,427 Sleeping for 9s. Reason: RUNNING
2024-12-08 17:13:56,683 Sleeping for 8s. Reason: RUNNING
2024-12-08 17:14:04,940 Sleeping for 5s. Reason: RUNNING
2024-12-08 17:14:10,199 Sleeping for 10s. Reason: RUNNING
2024-12-08 17:14:20,458 Sleeping for 8s. Reason: RUNNING
2024-12-08 17:14:28,717 Sleeping for 5s. Reason: RUNNING
2024-12-08 17:14:33,974 Sleeping for 6s. Reason: RUNNING
2024-12-08 17:14:45,415 Setting max_seq=508, max_extra_seq=2048
2024-12-08 17:18:00,614 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=64 pTM=0.431 ipTM=0.24
2024-12-08 17:18:31,155 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=66.3 pTM=0.469 ipTM=0.448 tol=19.8
2024-12-08 17:19:01,783 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=66.5 pTM=0.479 ipTM=0.45 tol=8.34
2024-12-08 17:19:32,440 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=66.8 pTM=0.468 ipTM=0.623 tol=5.42
2024-12-08 17:20:03,154 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=66.7 pTM=0.469 ipTM=0.619 tol=3.49
2024-12-08 17:20:33,914 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=66.9 pTM=0.462 ipTM=0.664 tol=4.08
2024-12-08 17:21:04,759 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=66.4 pTM=0.461 ipTM=0.617 tol=3.65
2024-12-08 17:21:35,607 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=67 pTM=0.468 ipTM=0.646 tol=6.46
2024-12-08 17:22:06,486 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=66.4 pTM=0.453 ipTM=0.596 tol=5.2
2024-12-08 17:22:37,311 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=67.1 pTM=0.47 ipTM=0.683 tol=2.98
2024-12-08 17:23:08,159 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=66.8 pTM=0.464 ipTM=0.637 tol=4.8
2024-12-08 17:23:39,052 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=67.1 pTM=0.469 ipTM=0.679 tol=3.74
2024-12-08 17:24:09,921 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=66.6 pTM=0.456 ipTM=0.61 tol=4.73
2024-12-08 17:24:40,792 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=66.8 pTM=0.458 ipTM=0.629 tol=2.49
2024-12-08 17:25:11,671 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=66.3 pTM=0.448 ipTM=0.569 tol=2.78
2024-12-08 17:25:42,543 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=66.7 pTM=0.464 ipTM=0.618 tol=4.55
2024-12-08 17:26:13,399 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=66.4 pTM=0.452 ipTM=0.581 tol=5.89
2024-12-08 17:26:44,291 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=66.7 pTM=0.46 ipTM=0.603 tol=5.75
2024-12-08 17:27:15,156 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=66.4 pTM=0.46 ipTM=0.468 tol=4.74
2024-12-08 17:27:46,056 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=66.2 pTM=0.452 ipTM=0.402 tol=4.91
2024-12-08 17:28:16,955 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=66.1 pTM=0.467 ipTM=0.421 tol=5.37
2024-12-08 17:28:47,871 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=66.1 pTM=0.467 ipTM=0.351 tol=5.17
2024-12-08 17:29:18,775 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=65.9 pTM=0.451 ipTM=0.348 tol=6.88
2024-12-08 17:29:49,690 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=66.1 pTM=0.456 ipTM=0.338 tol=2.89
2024-12-08 17:30:20,607 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=66.3 pTM=0.47 ipTM=0.327 tol=6.18
2024-12-08 17:30:51,559 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=66.1 pTM=0.462 ipTM=0.373 tol=4.64
2024-12-08 17:31:22,559 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=65.8 pTM=0.454 ipTM=0.304 tol=5.27
2024-12-08 17:31:53,479 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=65.9 pTM=0.464 ipTM=0.33 tol=6.7
2024-12-08 17:32:24,401 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=66.1 pTM=0.456 ipTM=0.448 tol=5.38
2024-12-08 17:32:55,340 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66.4 pTM=0.469 ipTM=0.559 tol=3.91
2024-12-08 17:33:26,238 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=67.1 pTM=0.483 ipTM=0.638 tol=6.23
2024-12-08 17:33:26,239 alphafold2_multimer_v3_model_1_seed_000 took 1116.1s (30 recycles)
2024-12-08 17:33:57,966 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=63.3 pTM=0.428 ipTM=0.325
2024-12-08 17:34:28,954 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=65.7 pTM=0.455 ipTM=0.276 tol=17.2
2024-12-08 17:34:59,943 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.1 pTM=0.47 ipTM=0.311 tol=8.85
2024-12-08 17:35:30,940 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=65.6 pTM=0.441 ipTM=0.268 tol=7.55
2024-12-08 17:36:01,973 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=66.1 pTM=0.452 ipTM=0.28 tol=9.93
2024-12-08 17:36:33,002 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=67.1 pTM=0.498 ipTM=0.379 tol=10.8
2024-12-08 17:37:03,967 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=67.1 pTM=0.499 ipTM=0.471 tol=5.92
2024-12-08 17:37:34,974 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=66.7 pTM=0.475 ipTM=0.304 tol=7.49
2024-12-08 17:38:05,973 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=66.8 pTM=0.505 ipTM=0.383 tol=6.93
2024-12-08 17:38:36,981 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=66.8 pTM=0.467 ipTM=0.333 tol=5.8
2024-12-08 17:39:07,969 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=66.6 pTM=0.463 ipTM=0.335 tol=5.38
2024-12-08 17:39:38,978 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=66.8 pTM=0.483 ipTM=0.338 tol=6.95
2024-12-08 17:40:09,996 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=66.9 pTM=0.471 ipTM=0.385 tol=6.19
2024-12-08 17:40:41,004 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=66.5 pTM=0.452 ipTM=0.335 tol=4.14
2024-12-08 17:41:12,006 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=66.8 pTM=0.481 ipTM=0.35 tol=6.95
2024-12-08 17:41:42,954 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=66.6 pTM=0.458 ipTM=0.306 tol=6.92
2024-12-08 17:42:13,933 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=66.6 pTM=0.458 ipTM=0.458 tol=7.19
2024-12-08 17:42:44,919 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=67.7 pTM=0.496 ipTM=0.668 tol=6.92
2024-12-08 17:43:15,876 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=67.1 pTM=0.474 ipTM=0.516 tol=7.29
2024-12-08 17:43:46,881 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=67 pTM=0.465 ipTM=0.553 tol=4.07
2024-12-08 17:44:17,907 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=67.2 pTM=0.477 ipTM=0.573 tol=5.04
2024-12-08 17:44:48,882 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=67.9 pTM=0.499 ipTM=0.692 tol=4.62
2024-12-08 17:45:19,898 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=67.8 pTM=0.496 ipTM=0.609 tol=3.06
2024-12-08 17:45:50,900 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=67.8 pTM=0.493 ipTM=0.67 tol=1.85
2024-12-08 17:46:21,848 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=67.1 pTM=0.467 ipTM=0.604 tol=1.73
2024-12-08 17:46:52,878 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=67.9 pTM=0.503 ipTM=0.692 tol=7.41
2024-12-08 17:47:23,876 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=67.5 pTM=0.481 ipTM=0.62 tol=7.34
2024-12-08 17:47:54,886 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=67.4 pTM=0.473 ipTM=0.685 tol=2.59
2024-12-08 17:48:25,936 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=67.3 pTM=0.476 ipTM=0.659 tol=5.68
2024-12-08 17:48:56,933 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=68.1 pTM=0.509 ipTM=0.71 tol=4.3
2024-12-08 17:49:27,936 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=67.7 pTM=0.495 ipTM=0.667 tol=2.73
2024-12-08 17:49:27,937 alphafold2_multimer_v3_model_2_seed_000 took 960.9s (30 recycles)
2024-12-08 17:49:59,856 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=64.9 pTM=0.469 ipTM=0.293
2024-12-08 17:50:31,002 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.2 pTM=0.495 ipTM=0.36 tol=15.6
2024-12-08 17:51:02,113 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=66.6 pTM=0.498 ipTM=0.395 tol=16.6
2024-12-08 17:51:33,264 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=67.2 pTM=0.488 ipTM=0.342 tol=10.3
2024-12-08 17:52:04,401 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=66.8 pTM=0.464 ipTM=0.288 tol=5.81
2024-12-08 17:52:35,540 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=66.6 pTM=0.444 ipTM=0.253 tol=6.13
2024-12-08 17:53:06,651 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=67 pTM=0.49 ipTM=0.359 tol=6.82
2024-12-08 17:53:37,763 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=67.2 pTM=0.479 ipTM=0.329 tol=3.51
2024-12-08 17:54:08,877 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=66.9 pTM=0.472 ipTM=0.334 tol=3.71
2024-12-08 17:54:39,991 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=67.2 pTM=0.484 ipTM=0.345 tol=3.47
2024-12-08 17:55:11,104 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=67.1 pTM=0.473 ipTM=0.317 tol=2.71
2024-12-08 17:55:42,256 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=67.1 pTM=0.461 ipTM=0.297 tol=5.75
2024-12-08 17:56:13,421 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=67.1 pTM=0.488 ipTM=0.364 tol=4.26
2024-12-08 17:56:44,628 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=66.9 pTM=0.448 ipTM=0.272 tol=3.21
2024-12-08 17:57:15,722 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=66.8 pTM=0.461 ipTM=0.31 tol=2.23
2024-12-08 17:57:46,823 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=67.2 pTM=0.482 ipTM=0.344 tol=3.76
2024-12-08 17:58:17,932 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=67.1 pTM=0.464 ipTM=0.299 tol=2.98
2024-12-08 17:58:49,076 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=66.9 pTM=0.448 ipTM=0.27 tol=4.38
2024-12-08 17:59:20,174 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=67.2 pTM=0.484 ipTM=0.346 tol=4.88
2024-12-08 17:59:51,350 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=66.9 pTM=0.454 ipTM=0.277 tol=3.46
2024-12-08 18:00:22,539 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=66.8 pTM=0.458 ipTM=0.3 tol=3.9
2024-12-08 18:00:53,660 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.3 pTM=0.484 ipTM=0.35 tol=5.09
2024-12-08 18:01:24,808 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=66.9 pTM=0.459 ipTM=0.291 tol=2.49
2024-12-08 18:01:55,969 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=66.6 pTM=0.445 ipTM=0.269 tol=4.93
2024-12-08 18:02:27,068 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=67.2 pTM=0.483 ipTM=0.35 tol=6.41
2024-12-08 18:02:58,195 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67.1 pTM=0.472 ipTM=0.315 tol=3.5
2024-12-08 18:03:29,387 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=67 pTM=0.458 ipTM=0.292 tol=4.28
2024-12-08 18:04:00,477 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.4 pTM=0.5 ipTM=0.385 tol=4.9
2024-12-08 18:04:31,592 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=67.1 pTM=0.465 ipTM=0.294 tol=3.43
2024-12-08 18:05:02,780 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=66.9 pTM=0.465 ipTM=0.316 tol=3.46
2024-12-08 18:05:33,917 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.3 pTM=0.486 ipTM=0.349 tol=3.98
2024-12-08 18:05:33,919 alphafold2_multimer_v3_model_3_seed_000 took 965.2s (30 recycles)
2024-12-08 18:06:05,865 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=63.1 pTM=0.461 ipTM=0.297
2024-12-08 18:06:36,907 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=66.7 pTM=0.52 ipTM=0.729 tol=15
2024-12-08 18:07:07,988 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65.8 pTM=0.474 ipTM=0.603 tol=10.7
2024-12-08 18:07:39,066 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=67.1 pTM=0.539 ipTM=0.665 tol=6.17
2024-12-08 18:08:10,107 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=66.2 pTM=0.515 ipTM=0.537 tol=4.34
2024-12-08 18:08:41,208 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=66.1 pTM=0.48 ipTM=0.588 tol=6.65
2024-12-08 18:09:12,291 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=65.8 pTM=0.506 ipTM=0.434 tol=8.45
2024-12-08 18:09:43,367 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=66.1 pTM=0.514 ipTM=0.429 tol=5.78
2024-12-08 18:10:14,509 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=66.2 pTM=0.537 ipTM=0.51 tol=4.91
2024-12-08 18:10:45,649 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=66.2 pTM=0.531 ipTM=0.489 tol=3.34
2024-12-08 18:11:16,767 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=66.1 pTM=0.543 ipTM=0.542 tol=5.66
2024-12-08 18:11:47,869 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=66 pTM=0.526 ipTM=0.491 tol=6.17
2024-12-08 18:12:18,971 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=66.2 pTM=0.532 ipTM=0.498 tol=6.02
2024-12-08 18:12:50,033 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=66.1 pTM=0.521 ipTM=0.466 tol=6.63
2024-12-08 18:13:21,141 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=66.1 pTM=0.532 ipTM=0.499 tol=1.75
2024-12-08 18:13:52,247 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=65.9 pTM=0.521 ipTM=0.469 tol=5.52
2024-12-08 18:14:23,341 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=66.1 pTM=0.529 ipTM=0.483 tol=7.26
2024-12-08 18:14:54,473 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=65.9 pTM=0.519 ipTM=0.472 tol=6.76
2024-12-08 18:15:25,563 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=66.1 pTM=0.536 ipTM=0.516 tol=5.01
2024-12-08 18:15:56,682 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=66.1 pTM=0.529 ipTM=0.504 tol=1.88
2024-12-08 18:16:27,743 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=66.2 pTM=0.547 ipTM=0.56 tol=5
2024-12-08 18:16:58,853 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=66.2 pTM=0.535 ipTM=0.525 tol=6.59
2024-12-08 18:17:29,955 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=66.6 pTM=0.567 ipTM=0.618 tol=2.38
2024-12-08 18:18:01,076 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=66.2 pTM=0.546 ipTM=0.563 tol=5.67
2024-12-08 18:18:32,195 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=66.3 pTM=0.563 ipTM=0.613 tol=5.82
2024-12-08 18:19:03,344 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=66.2 pTM=0.552 ipTM=0.587 tol=3.02
2024-12-08 18:19:34,470 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=66.4 pTM=0.569 ipTM=0.642 tol=6.29
2024-12-08 18:20:05,590 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=66.4 pTM=0.571 ipTM=0.65 tol=6.09
2024-12-08 18:20:36,726 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=66.5 pTM=0.563 ipTM=0.605 tol=2.24
2024-12-08 18:21:07,882 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=66.2 pTM=0.549 ipTM=0.565 tol=3.33
2024-12-08 18:21:38,985 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=66.3 pTM=0.559 ipTM=0.602 tol=3.41
2024-12-08 18:21:38,986 alphafold2_multimer_v3_model_4_seed_000 took 964.3s (30 recycles)
2024-12-08 18:22:10,857 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=63.5 pTM=0.491 ipTM=0.369
2024-12-08 18:22:41,997 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=65.5 pTM=0.458 ipTM=0.292 tol=14.9
2024-12-08 18:23:13,096 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=65.9 pTM=0.476 ipTM=0.352 tol=8.81
2024-12-08 18:23:44,281 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=65.7 pTM=0.449 ipTM=0.281 tol=7.75
2024-12-08 18:24:15,504 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=65.7 pTM=0.439 ipTM=0.263 tol=9.02
2024-12-08 18:24:46,682 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=65.6 pTM=0.443 ipTM=0.271 tol=3.46
2024-12-08 18:25:17,885 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=65.5 pTM=0.437 ipTM=0.266 tol=3.28
2024-12-08 18:25:49,025 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=66.4 pTM=0.467 ipTM=0.336 tol=5.53
2024-12-08 18:26:20,175 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=65.9 pTM=0.456 ipTM=0.304 tol=6.41
2024-12-08 18:26:51,353 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=66 pTM=0.442 ipTM=0.274 tol=3.59
2024-12-08 18:27:22,536 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=65.9 pTM=0.453 ipTM=0.301 tol=4.69
2024-12-08 18:27:53,698 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=66 pTM=0.44 ipTM=0.269 tol=3.77
2024-12-08 18:28:24,865 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=66.1 pTM=0.461 ipTM=0.315 tol=5.48
2024-12-08 18:28:56,014 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=66.1 pTM=0.446 ipTM=0.287 tol=3.36
2024-12-08 18:29:27,248 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=65.8 pTM=0.444 ipTM=0.288 tol=5.39
2024-12-08 18:29:58,446 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=66 pTM=0.454 ipTM=0.304 tol=3.18
2024-12-08 18:30:29,637 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=66.1 pTM=0.449 ipTM=0.294 tol=4.96
2024-12-08 18:31:00,828 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=66.1 pTM=0.445 ipTM=0.283 tol=3.05
2024-12-08 18:31:32,057 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=65.9 pTM=0.432 ipTM=0.262 tol=2.67
2024-12-08 18:32:03,311 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=66.1 pTM=0.443 ipTM=0.285 tol=5.89
2024-12-08 18:32:34,512 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=66.5 pTM=0.468 ipTM=0.33 tol=6.02
2024-12-08 18:33:05,693 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=66.2 pTM=0.46 ipTM=0.325 tol=3.52
2024-12-08 18:33:36,931 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=66 pTM=0.455 ipTM=0.321 tol=6.29
2024-12-08 18:34:08,099 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=66.2 pTM=0.469 ipTM=0.338 tol=5.2
2024-12-08 18:34:39,275 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=66.2 pTM=0.45 ipTM=0.3 tol=4.62
2024-12-08 18:35:10,369 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=66.1 pTM=0.459 ipTM=0.317 tol=4.11
2024-12-08 18:35:41,492 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=66.1 pTM=0.453 ipTM=0.308 tol=3.84
2024-12-08 18:36:12,601 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=65.8 pTM=0.443 ipTM=0.284 tol=2.39
2024-12-08 18:36:43,690 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=66 pTM=0.454 ipTM=0.313 tol=2.04
2024-12-08 18:37:14,814 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=66.1 pTM=0.453 ipTM=0.301 tol=5.22
2024-12-08 18:37:45,931 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=66 pTM=0.445 ipTM=0.285 tol=2.08
2024-12-08 18:37:45,932 alphafold2_multimer_v3_model_5_seed_000 took 966.1s (30 recycles)
2024-12-08 18:37:46,731 reranking models by 'multimer' metric
2024-12-08 18:37:48,224 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 18:39:27,666 Relaxation took 100.9s
2024-12-08 18:39:27,666 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=67.7 pTM=0.495 ipTM=0.667
2024-12-08 18:41:00,163 Relaxation took 92.5s
2024-12-08 18:41:00,163 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=67.1 pTM=0.483 ipTM=0.638
2024-12-08 18:43:08,640 Relaxation took 128.5s
2024-12-08 18:43:08,640 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=66.3 pTM=0.559 ipTM=0.602
2024-12-08 18:44:44,034 Relaxation took 95.4s
2024-12-08 18:44:44,035 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.3 pTM=0.486 ipTM=0.349
2024-12-08 18:46:24,242 Relaxation took 100.2s
2024-12-08 18:46:24,242 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=66 pTM=0.445 ipTM=0.285
2024-12-08 18:46:26,343 Done