2024-12-08 17:22:43,974 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 17:22:44,323 Running on GPU
2024-12-08 17:22:45,298 Found 6 citations for tools or databases
2024-12-08 17:22:45,299 Query 1/1: TMF1_BAG2 (length 1304)
2024-12-08 17:22:45,563 Sleeping for 10s. Reason: PENDING
2024-12-08 17:22:55,823 Sleeping for 9s. Reason: RUNNING
2024-12-08 17:23:05,090 Sleeping for 5s. Reason: RUNNING
2024-12-08 17:23:10,344 Sleeping for 7s. Reason: RUNNING
2024-12-08 17:23:17,606 Sleeping for 6s. Reason: RUNNING
2024-12-08 17:23:23,860 Sleeping for 8s. Reason: RUNNING
2024-12-08 17:23:32,119 Sleeping for 9s. Reason: RUNNING
2024-12-08 17:23:42,647 Sleeping for 10s. Reason: PENDING
2024-12-08 17:23:52,907 Sleeping for 6s. Reason: RUNNING
2024-12-08 17:23:59,164 Sleeping for 6s. Reason: RUNNING
2024-12-08 17:24:05,428 Sleeping for 8s. Reason: RUNNING
2024-12-08 17:24:13,688 Sleeping for 7s. Reason: RUNNING
2024-12-08 17:24:23,261 Setting max_seq=508, max_extra_seq=2048
2024-12-08 17:27:31,032 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=49 pTM=0.237 ipTM=0.21
2024-12-08 17:28:11,537 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=50.8 pTM=0.235 ipTM=0.193 tol=28.2
2024-12-08 17:28:52,090 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=49.8 pTM=0.234 ipTM=0.186 tol=17.9
2024-12-08 17:29:32,712 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=50 pTM=0.232 ipTM=0.179 tol=14
2024-12-08 17:30:13,390 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=49 pTM=0.229 ipTM=0.178 tol=13.8
2024-12-08 17:30:54,110 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=48.8 pTM=0.23 ipTM=0.186 tol=16
2024-12-08 17:31:34,838 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=49.3 pTM=0.231 ipTM=0.182 tol=11
2024-12-08 17:32:15,584 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=48.5 pTM=0.23 ipTM=0.187 tol=10.2
2024-12-08 17:32:56,348 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=48.1 pTM=0.23 ipTM=0.182 tol=8.48
2024-12-08 17:33:37,127 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=48.5 pTM=0.226 ipTM=0.177 tol=11.7
2024-12-08 17:34:17,868 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=48.6 pTM=0.226 ipTM=0.181 tol=10.1
2024-12-08 17:34:58,632 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=49 pTM=0.229 ipTM=0.179 tol=13.9
2024-12-08 17:35:39,484 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=48.4 pTM=0.229 ipTM=0.2 tol=15.3
2024-12-08 17:36:20,458 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=48.5 pTM=0.241 ipTM=0.309 tol=19.8
2024-12-08 17:37:01,454 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=48 pTM=0.239 ipTM=0.272 tol=13.9
2024-12-08 17:37:42,389 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=47.9 pTM=0.241 ipTM=0.28 tol=13.5
2024-12-08 17:38:23,309 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=47.7 pTM=0.232 ipTM=0.207 tol=9.78
2024-12-08 17:39:04,316 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=48.4 pTM=0.228 ipTM=0.187 tol=12
2024-12-08 17:39:45,211 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=48.8 pTM=0.226 ipTM=0.181 tol=15.8
2024-12-08 17:40:26,066 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=49 pTM=0.228 ipTM=0.182 tol=8.73
2024-12-08 17:41:06,918 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=48.6 pTM=0.227 ipTM=0.176 tol=8.03
2024-12-08 17:41:47,850 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=48.9 pTM=0.227 ipTM=0.186 tol=8.06
2024-12-08 17:42:28,743 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=48.4 pTM=0.226 ipTM=0.182 tol=8.69
2024-12-08 17:43:09,626 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=49.2 pTM=0.227 ipTM=0.193 tol=9.94
2024-12-08 17:43:50,535 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=49.2 pTM=0.226 ipTM=0.191 tol=17.2
2024-12-08 17:44:31,386 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=49.3 pTM=0.227 ipTM=0.188 tol=14.4
2024-12-08 17:45:12,224 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=49 pTM=0.224 ipTM=0.187 tol=14
2024-12-08 17:45:53,032 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=48.9 pTM=0.226 ipTM=0.186 tol=14.8
2024-12-08 17:46:33,815 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=48.3 pTM=0.226 ipTM=0.178 tol=20.3
2024-12-08 17:47:14,558 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=48.5 pTM=0.228 ipTM=0.181 tol=15.5
2024-12-08 17:47:55,309 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=49.2 pTM=0.225 ipTM=0.184 tol=13.9
2024-12-08 17:47:55,311 alphafold2_multimer_v3_model_1_seed_000 took 1404.9s (30 recycles)
2024-12-08 17:48:37,576 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=46 pTM=0.23 ipTM=0.141
2024-12-08 17:49:18,551 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=48.9 pTM=0.229 ipTM=0.137 tol=43.1
2024-12-08 17:49:59,441 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=48.7 pTM=0.231 ipTM=0.14 tol=18.7
2024-12-08 17:50:40,333 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=49.2 pTM=0.229 ipTM=0.148 tol=25
2024-12-08 17:51:21,254 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=49.2 pTM=0.227 ipTM=0.143 tol=14.4
2024-12-08 17:52:02,176 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=49.6 pTM=0.227 ipTM=0.146 tol=16.6
2024-12-08 17:52:43,115 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=50.1 pTM=0.227 ipTM=0.144 tol=18.2
2024-12-08 17:53:24,057 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=50.5 pTM=0.226 ipTM=0.146 tol=10.7
2024-12-08 17:54:04,977 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=49.8 pTM=0.227 ipTM=0.146 tol=8.57
2024-12-08 17:54:45,886 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=49.9 pTM=0.226 ipTM=0.145 tol=7.04
2024-12-08 17:55:26,786 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=50 pTM=0.226 ipTM=0.144 tol=7.29
2024-12-08 17:56:07,714 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=50.2 pTM=0.226 ipTM=0.142 tol=6.35
2024-12-08 17:56:48,648 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=50.6 pTM=0.226 ipTM=0.144 tol=7.3
2024-12-08 17:57:29,565 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=50.3 pTM=0.227 ipTM=0.143 tol=11.8
2024-12-08 17:58:10,482 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=50 pTM=0.226 ipTM=0.141 tol=13
2024-12-08 17:58:51,428 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=50.2 pTM=0.226 ipTM=0.137 tol=11.5
2024-12-08 17:59:32,368 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=50.7 pTM=0.226 ipTM=0.138 tol=8.27
2024-12-08 18:00:13,269 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=50.5 pTM=0.226 ipTM=0.139 tol=10.6
2024-12-08 18:00:54,219 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=50.1 pTM=0.227 ipTM=0.139 tol=11.5
2024-12-08 18:01:35,111 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=50.5 pTM=0.227 ipTM=0.141 tol=8.09
2024-12-08 18:02:16,028 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=50.3 pTM=0.227 ipTM=0.138 tol=6.55
2024-12-08 18:02:56,954 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=50.9 pTM=0.226 ipTM=0.138 tol=4.98
2024-12-08 18:03:37,880 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=49.3 pTM=0.227 ipTM=0.138 tol=10.4
2024-12-08 18:04:18,807 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=50.2 pTM=0.227 ipTM=0.137 tol=10.9
2024-12-08 18:04:59,749 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=50.2 pTM=0.227 ipTM=0.138 tol=7.26
2024-12-08 18:05:40,699 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=50.2 pTM=0.226 ipTM=0.138 tol=11.7
2024-12-08 18:06:21,643 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=49.8 pTM=0.226 ipTM=0.14 tol=12.1
2024-12-08 18:07:02,599 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=49.1 pTM=0.226 ipTM=0.138 tol=9.25
2024-12-08 18:07:43,618 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=49.6 pTM=0.229 ipTM=0.136 tol=12.1
2024-12-08 18:08:24,544 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=49.5 pTM=0.228 ipTM=0.141 tol=10.3
2024-12-08 18:09:05,462 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=50 pTM=0.228 ipTM=0.139 tol=11.8
2024-12-08 18:09:05,464 alphafold2_multimer_v3_model_2_seed_000 took 1268.9s (30 recycles)
2024-12-08 18:09:47,791 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=50.3 pTM=0.24 ipTM=0.167
2024-12-08 18:10:28,729 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=49.9 pTM=0.244 ipTM=0.152 tol=23.5
2024-12-08 18:11:09,591 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=50.1 pTM=0.247 ipTM=0.151 tol=20.4
2024-12-08 18:11:50,495 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=50.9 pTM=0.248 ipTM=0.154 tol=11.3
2024-12-08 18:12:31,329 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=50.5 pTM=0.247 ipTM=0.159 tol=12.3
2024-12-08 18:13:12,172 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=50.7 pTM=0.248 ipTM=0.164 tol=10.9
2024-12-08 18:13:53,041 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=51.4 pTM=0.247 ipTM=0.166 tol=11.6
2024-12-08 18:14:33,918 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=51.3 pTM=0.247 ipTM=0.167 tol=7.35
2024-12-08 18:15:14,756 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=51 pTM=0.247 ipTM=0.168 tol=5.78
2024-12-08 18:15:55,611 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=50.8 pTM=0.248 ipTM=0.17 tol=10.1
2024-12-08 18:16:36,426 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=51 pTM=0.248 ipTM=0.17 tol=4.34
2024-12-08 18:17:17,245 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=51.3 pTM=0.249 ipTM=0.166 tol=9.06
2024-12-08 18:17:58,084 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=50.7 pTM=0.247 ipTM=0.165 tol=4.02
2024-12-08 18:18:38,946 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=51.4 pTM=0.248 ipTM=0.164 tol=3.86
2024-12-08 18:19:19,784 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=51 pTM=0.247 ipTM=0.164 tol=9.92
2024-12-08 18:20:00,655 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=50.9 pTM=0.248 ipTM=0.162 tol=9.66
2024-12-08 18:20:41,536 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=50.5 pTM=0.245 ipTM=0.163 tol=3.77
2024-12-08 18:21:22,369 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=50.7 pTM=0.248 ipTM=0.167 tol=4.89
2024-12-08 18:22:03,195 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=50.8 pTM=0.247 ipTM=0.167 tol=2.92
2024-12-08 18:22:44,052 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=51 pTM=0.248 ipTM=0.165 tol=3.1
2024-12-08 18:23:24,902 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=51.2 pTM=0.248 ipTM=0.168 tol=2.57
2024-12-08 18:24:05,745 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=51.6 pTM=0.248 ipTM=0.165 tol=9.99
2024-12-08 18:24:46,589 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=51.3 pTM=0.247 ipTM=0.165 tol=9.52
2024-12-08 18:25:27,434 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=51.8 pTM=0.249 ipTM=0.164 tol=3.21
2024-12-08 18:26:08,301 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=51.7 pTM=0.246 ipTM=0.16 tol=3.59
2024-12-08 18:26:49,167 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=51.6 pTM=0.248 ipTM=0.161 tol=3.17
2024-12-08 18:27:30,040 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=51.1 pTM=0.247 ipTM=0.161 tol=2.9
2024-12-08 18:28:10,902 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=51 pTM=0.248 ipTM=0.162 tol=2.1
2024-12-08 18:28:51,749 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=51.1 pTM=0.246 ipTM=0.161 tol=2.59
2024-12-08 18:29:32,605 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=51.5 pTM=0.248 ipTM=0.16 tol=3.24
2024-12-08 18:30:13,482 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=51 pTM=0.245 ipTM=0.159 tol=3.76
2024-12-08 18:30:13,483 alphafold2_multimer_v3_model_3_seed_000 took 1266.7s (30 recycles)
2024-12-08 18:30:55,836 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=43.3 pTM=0.235 ipTM=0.136
2024-12-08 18:31:36,841 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=44.6 pTM=0.238 ipTM=0.147 tol=26
2024-12-08 18:32:17,792 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=45.1 pTM=0.237 ipTM=0.144 tol=20.8
2024-12-08 18:32:58,744 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=45.2 pTM=0.239 ipTM=0.146 tol=17.9
2024-12-08 18:33:39,701 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=44.8 pTM=0.236 ipTM=0.145 tol=13.7
2024-12-08 18:34:20,628 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=45 pTM=0.237 ipTM=0.142 tol=17.6
2024-12-08 18:35:01,553 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=45.7 pTM=0.236 ipTM=0.141 tol=15.3
2024-12-08 18:35:42,476 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=45.8 pTM=0.237 ipTM=0.142 tol=9.5
2024-12-08 18:36:23,406 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=45.4 pTM=0.237 ipTM=0.142 tol=8.52
2024-12-08 18:37:04,339 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=45.1 pTM=0.237 ipTM=0.142 tol=9.75
2024-12-08 18:37:45,317 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=45.4 pTM=0.236 ipTM=0.142 tol=8.35
2024-12-08 18:38:26,255 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=45.5 pTM=0.238 ipTM=0.143 tol=10.8
2024-12-08 18:39:07,180 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=45 pTM=0.236 ipTM=0.143 tol=7.38
2024-12-08 18:39:48,109 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=45.2 pTM=0.238 ipTM=0.143 tol=7.46
2024-12-08 18:40:29,021 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=44.5 pTM=0.236 ipTM=0.145 tol=9.16
2024-12-08 18:41:09,936 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=44.8 pTM=0.238 ipTM=0.144 tol=6.81
2024-12-08 18:41:50,895 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=45 pTM=0.236 ipTM=0.143 tol=11.2
2024-12-08 18:42:31,844 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=44.8 pTM=0.237 ipTM=0.142 tol=11.3
2024-12-08 18:43:12,778 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=45.3 pTM=0.236 ipTM=0.14 tol=10.7
2024-12-08 18:43:53,713 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=45.5 pTM=0.237 ipTM=0.141 tol=14
2024-12-08 18:44:34,669 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=45.4 pTM=0.236 ipTM=0.142 tol=12.8
2024-12-08 18:45:15,587 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=45.9 pTM=0.238 ipTM=0.142 tol=9.8
2024-12-08 18:45:56,528 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=45.3 pTM=0.236 ipTM=0.141 tol=7.15
2024-12-08 18:46:37,439 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=45.7 pTM=0.238 ipTM=0.143 tol=6.82
2024-12-08 18:47:18,360 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=45.8 pTM=0.236 ipTM=0.141 tol=12.1
2024-12-08 18:47:59,271 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=45.3 pTM=0.237 ipTM=0.142 tol=9.29
2024-12-08 18:48:40,195 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=44.8 pTM=0.236 ipTM=0.144 tol=9.29
2024-12-08 18:49:21,164 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=45.1 pTM=0.237 ipTM=0.144 tol=7.96
2024-12-08 18:50:02,109 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=45 pTM=0.236 ipTM=0.144 tol=7.17
2024-12-08 18:50:43,055 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=45.2 pTM=0.237 ipTM=0.144 tol=8.56
2024-12-08 18:51:24,040 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=45.4 pTM=0.235 ipTM=0.144 tol=8.54
2024-12-08 18:51:24,041 alphafold2_multimer_v3_model_4_seed_000 took 1269.3s (30 recycles)
2024-12-08 18:52:06,443 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=49.2 pTM=0.236 ipTM=0.159
2024-12-08 18:52:47,477 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=51.6 pTM=0.236 ipTM=0.137 tol=24.7
2024-12-08 18:53:28,349 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=51.6 pTM=0.241 ipTM=0.147 tol=18.6
2024-12-08 18:54:09,237 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=51.7 pTM=0.242 ipTM=0.156 tol=9.66
2024-12-08 18:54:50,109 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=51.4 pTM=0.243 ipTM=0.156 tol=11.8
2024-12-08 18:55:30,991 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=51.6 pTM=0.243 ipTM=0.157 tol=7.53
2024-12-08 18:56:11,880 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=51.7 pTM=0.242 ipTM=0.157 tol=8.26
2024-12-08 18:56:52,785 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=51.3 pTM=0.241 ipTM=0.163 tol=6.96
2024-12-08 18:57:33,660 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=51.1 pTM=0.243 ipTM=0.166 tol=6.35
2024-12-08 18:58:14,564 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=50.8 pTM=0.242 ipTM=0.163 tol=9.84
2024-12-08 18:58:55,464 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=50.8 pTM=0.242 ipTM=0.16 tol=9.61
2024-12-08 18:59:36,389 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=50.7 pTM=0.241 ipTM=0.158 tol=12.4
2024-12-08 19:00:17,305 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=50.9 pTM=0.242 ipTM=0.157 tol=10.2
2024-12-08 19:00:58,223 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=50.8 pTM=0.243 ipTM=0.157 tol=14.2
2024-12-08 19:01:39,093 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=49.9 pTM=0.243 ipTM=0.161 tol=12.1
2024-12-08 19:02:19,986 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=51 pTM=0.243 ipTM=0.158 tol=12.7
2024-12-08 19:03:00,883 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=50.8 pTM=0.243 ipTM=0.161 tol=7
2024-12-08 19:03:41,770 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=50.9 pTM=0.243 ipTM=0.16 tol=4.47
2024-12-08 19:04:22,643 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=51.3 pTM=0.244 ipTM=0.166 tol=4.34
2024-12-08 19:05:03,540 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=50.8 pTM=0.244 ipTM=0.166 tol=4.52
2024-12-08 19:05:44,417 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=50.8 pTM=0.244 ipTM=0.163 tol=4.02
2024-12-08 19:06:25,326 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=51.2 pTM=0.243 ipTM=0.162 tol=5.43
2024-12-08 19:07:06,212 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=50.4 pTM=0.243 ipTM=0.165 tol=7.84
2024-12-08 19:07:47,139 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=50.8 pTM=0.244 ipTM=0.163 tol=5.13
2024-12-08 19:08:28,039 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=51.1 pTM=0.243 ipTM=0.158 tol=6.27
2024-12-08 19:09:08,938 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=50.4 pTM=0.243 ipTM=0.157 tol=9.74
2024-12-08 19:09:49,834 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=50 pTM=0.243 ipTM=0.16 tol=10.8
2024-12-08 19:10:30,686 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=50.2 pTM=0.245 ipTM=0.163 tol=9.28
2024-12-08 19:11:11,553 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=50.8 pTM=0.244 ipTM=0.159 tol=7.3
2024-12-08 19:11:52,385 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=50.7 pTM=0.245 ipTM=0.159 tol=8.55
2024-12-08 19:12:33,293 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=50.8 pTM=0.244 ipTM=0.157 tol=10.5
2024-12-08 19:12:33,294 alphafold2_multimer_v3_model_5_seed_000 took 1267.9s (30 recycles)
2024-12-08 19:12:34,597 reranking models by 'multimer' metric
2024-12-08 19:12:38,501 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 19:15:09,402 Relaxation took 154.8s
2024-12-08 19:15:09,402 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=49.2 pTM=0.225 ipTM=0.184
2024-12-08 19:16:58,110 Relaxation took 108.7s
2024-12-08 19:16:58,110 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=51 pTM=0.245 ipTM=0.159
2024-12-08 19:18:47,119 Relaxation took 109.0s
2024-12-08 19:18:47,119 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=50.8 pTM=0.244 ipTM=0.157
2024-12-08 19:22:16,370 Relaxation took 209.3s
2024-12-08 19:22:16,370 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=45.4 pTM=0.235 ipTM=0.144
2024-12-08 19:24:11,530 Relaxation took 115.2s
2024-12-08 19:24:11,530 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=50 pTM=0.228 ipTM=0.139
2024-12-08 19:24:14,840 Done