2024-12-08 17:25:47,140 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 17:25:47,481 Running on GPU
2024-12-08 17:25:49,899 Found 6 citations for tools or databases
2024-12-08 17:25:49,899 Query 1/1: TNFAIP3_SHKBP1 (length 1497)
2024-12-08 17:25:50,174 Sleeping for 10s. Reason: PENDING
2024-12-08 17:26:00,443 Sleeping for 6s. Reason: PENDING
2024-12-08 17:26:06,703 Sleeping for 10s. Reason: PENDING
2024-12-08 17:26:16,961 Sleeping for 6s. Reason: PENDING
2024-12-08 17:26:23,224 Sleeping for 5s. Reason: PENDING
2024-12-08 17:26:28,482 Sleeping for 10s. Reason: PENDING
2024-12-08 17:26:38,764 Sleeping for 9s. Reason: PENDING
2024-12-08 17:26:48,026 Sleeping for 6s. Reason: PENDING
2024-12-08 17:26:54,290 Sleeping for 9s. Reason: PENDING
2024-12-08 17:27:03,549 Sleeping for 6s. Reason: PENDING
2024-12-08 17:27:09,801 Sleeping for 9s. Reason: PENDING
2024-12-08 17:27:19,060 Sleeping for 9s. Reason: PENDING
2024-12-08 17:27:28,316 Sleeping for 8s. Reason: PENDING
2024-12-08 17:27:36,574 Sleeping for 8s. Reason: PENDING
2024-12-08 17:27:44,829 Sleeping for 5s. Reason: PENDING
2024-12-08 17:27:50,087 Sleeping for 10s. Reason: PENDING
2024-12-08 17:28:00,347 Sleeping for 8s. Reason: PENDING
2024-12-08 17:28:08,614 Sleeping for 9s. Reason: PENDING
2024-12-08 17:28:17,880 Sleeping for 10s. Reason: PENDING
2024-12-08 17:28:28,140 Sleeping for 5s. Reason: PENDING
2024-12-08 17:28:33,400 Sleeping for 7s. Reason: PENDING
2024-12-08 17:28:40,663 Sleeping for 7s. Reason: PENDING
2024-12-08 17:28:47,925 Sleeping for 6s. Reason: PENDING
2024-12-08 17:28:54,179 Sleeping for 10s. Reason: PENDING
2024-12-08 17:29:04,438 Sleeping for 6s. Reason: PENDING
2024-12-08 17:29:10,698 Sleeping for 8s. Reason: PENDING
2024-12-08 17:29:18,955 Sleeping for 5s. Reason: PENDING
2024-12-08 17:29:24,206 Sleeping for 9s. Reason: PENDING
2024-12-08 17:29:33,467 Sleeping for 6s. Reason: PENDING
2024-12-08 17:29:39,723 Sleeping for 5s. Reason: PENDING
2024-12-08 17:29:44,984 Sleeping for 5s. Reason: PENDING
2024-12-08 17:29:50,236 Sleeping for 6s. Reason: PENDING
2024-12-08 17:29:56,497 Sleeping for 8s. Reason: PENDING
2024-12-08 17:30:04,763 Sleeping for 6s. Reason: PENDING
2024-12-08 17:30:11,017 Sleeping for 7s. Reason: PENDING
2024-12-08 17:30:18,275 Sleeping for 8s. Reason: PENDING
2024-12-08 17:30:26,536 Sleeping for 9s. Reason: PENDING
2024-12-08 17:30:35,804 Sleeping for 5s. Reason: PENDING
2024-12-08 17:30:41,064 Sleeping for 10s. Reason: PENDING
2024-12-08 17:30:51,325 Sleeping for 6s. Reason: PENDING
2024-12-08 17:30:57,586 Sleeping for 8s. Reason: PENDING
2024-12-08 17:31:05,852 Sleeping for 5s. Reason: PENDING
2024-12-08 17:31:11,113 Sleeping for 5s. Reason: PENDING
2024-12-08 17:31:16,368 Sleeping for 5s. Reason: PENDING
2024-12-08 17:31:21,620 Sleeping for 8s. Reason: PENDING
2024-12-08 17:31:29,888 Sleeping for 10s. Reason: PENDING
2024-12-08 17:31:40,148 Sleeping for 5s. Reason: PENDING
2024-12-08 17:31:45,408 Sleeping for 8s. Reason: PENDING
2024-12-08 17:31:53,678 Sleeping for 6s. Reason: PENDING
2024-12-08 17:31:59,943 Sleeping for 10s. Reason: PENDING
2024-12-08 17:32:10,212 Sleeping for 9s. Reason: PENDING
2024-12-08 17:32:19,477 Sleeping for 9s. Reason: PENDING
2024-12-08 17:32:28,735 Sleeping for 6s. Reason: RUNNING
2024-12-08 17:32:34,996 Sleeping for 6s. Reason: RUNNING
2024-12-08 17:32:41,256 Sleeping for 7s. Reason: RUNNING
2024-12-08 17:32:48,515 Sleeping for 6s. Reason: RUNNING
2024-12-08 17:32:54,776 Sleeping for 10s. Reason: RUNNING
2024-12-08 17:33:05,037 Sleeping for 10s. Reason: RUNNING
2024-12-08 17:33:15,301 Sleeping for 7s. Reason: RUNNING
2024-12-08 17:33:22,562 Sleeping for 10s. Reason: RUNNING
2024-12-08 17:33:32,828 Sleeping for 7s. Reason: RUNNING
2024-12-08 17:33:40,085 Sleeping for 5s. Reason: RUNNING
2024-12-08 17:33:45,344 Sleeping for 6s. Reason: RUNNING
2024-12-08 17:33:51,602 Sleeping for 8s. Reason: RUNNING
2024-12-08 17:33:59,872 Sleeping for 9s. Reason: RUNNING
2024-12-08 17:34:09,134 Sleeping for 7s. Reason: RUNNING
2024-12-08 17:34:16,391 Sleeping for 10s. Reason: RUNNING
2024-12-08 17:34:26,650 Sleeping for 8s. Reason: RUNNING
2024-12-08 17:34:34,912 Sleeping for 6s. Reason: RUNNING
2024-12-08 17:34:42,711 Sleeping for 10s. Reason: PENDING
2024-12-08 17:34:52,974 Sleeping for 8s. Reason: RUNNING
2024-12-08 17:35:01,228 Sleeping for 8s. Reason: RUNNING
2024-12-08 17:35:09,488 Sleeping for 8s. Reason: RUNNING
2024-12-08 17:35:17,756 Sleeping for 6s. Reason: RUNNING
2024-12-08 17:35:24,021 Sleeping for 5s. Reason: RUNNING
2024-12-08 17:35:29,278 Sleeping for 6s. Reason: RUNNING
2024-12-08 17:35:35,545 Sleeping for 10s. Reason: RUNNING
2024-12-08 17:35:45,808 Sleeping for 9s. Reason: RUNNING
2024-12-08 17:35:55,066 Sleeping for 7s. Reason: RUNNING
2024-12-08 17:36:02,330 Sleeping for 10s. Reason: RUNNING
2024-12-08 17:36:16,517 Setting max_seq=508, max_extra_seq=2048
2024-12-08 17:40:59,168 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=56.8 pTM=0.397 ipTM=0.22
2024-12-08 17:42:01,812 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=58.8 pTM=0.389 ipTM=0.189 tol=18.5
2024-12-08 17:43:04,740 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=61.2 pTM=0.424 ipTM=0.281 tol=12.5
2024-12-08 17:44:07,861 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=60.3 pTM=0.402 ipTM=0.2 tol=6.32
2024-12-08 17:45:11,014 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=60.3 pTM=0.405 ipTM=0.22 tol=5.09
2024-12-08 17:46:14,116 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=60.1 pTM=0.4 ipTM=0.193 tol=3.99
2024-12-08 17:47:17,070 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=60.4 pTM=0.403 ipTM=0.214 tol=3.87
2024-12-08 17:48:19,958 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=60.1 pTM=0.4 ipTM=0.197 tol=2.97
2024-12-08 17:49:22,793 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=60.4 pTM=0.406 ipTM=0.222 tol=3.78
2024-12-08 17:50:25,673 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=60.5 pTM=0.404 ipTM=0.195 tol=3.57
2024-12-08 17:51:28,504 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=60.4 pTM=0.406 ipTM=0.208 tol=2.7
2024-12-08 17:52:31,336 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=60.3 pTM=0.403 ipTM=0.197 tol=2.73
2024-12-08 17:53:34,179 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=60.6 pTM=0.407 ipTM=0.222 tol=3.56
2024-12-08 17:54:37,031 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=60.4 pTM=0.403 ipTM=0.202 tol=2.04
2024-12-08 17:55:39,900 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60.6 pTM=0.405 ipTM=0.209 tol=2.2
2024-12-08 17:56:42,813 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60.3 pTM=0.402 ipTM=0.193 tol=2.43
2024-12-08 17:57:45,729 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60.5 pTM=0.404 ipTM=0.207 tol=3.35
2024-12-08 17:58:48,718 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=60.2 pTM=0.401 ipTM=0.191 tol=2.56
2024-12-08 17:59:51,637 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=60.3 pTM=0.403 ipTM=0.209 tol=2.53
2024-12-08 18:00:54,610 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=60.2 pTM=0.399 ipTM=0.19 tol=2.29
2024-12-08 18:01:57,518 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=60.4 pTM=0.404 ipTM=0.205 tol=2.5
2024-12-08 18:03:00,451 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=60.4 pTM=0.402 ipTM=0.189 tol=2.39
2024-12-08 18:04:03,355 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60.7 pTM=0.406 ipTM=0.217 tol=2.5
2024-12-08 18:05:06,335 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60.2 pTM=0.4 ipTM=0.19 tol=2.04
2024-12-08 18:06:09,220 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=60.5 pTM=0.405 ipTM=0.206 tol=1.71
2024-12-08 18:07:12,122 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60.3 pTM=0.403 ipTM=0.187 tol=1.42
2024-12-08 18:08:15,063 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60.4 pTM=0.404 ipTM=0.209 tol=1.94
2024-12-08 18:09:17,985 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=60.3 pTM=0.4 ipTM=0.187 tol=2.73
2024-12-08 18:10:20,903 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=60.4 pTM=0.403 ipTM=0.202 tol=2.48
2024-12-08 18:11:23,846 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=60.2 pTM=0.4 ipTM=0.188 tol=2.54
2024-12-08 18:12:26,799 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=60.7 pTM=0.405 ipTM=0.214 tol=2.84
2024-12-08 18:12:26,801 alphafold2_multimer_v3_model_1_seed_000 took 2163.4s (30 recycles)
2024-12-08 18:13:31,499 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=57.9 pTM=0.402 ipTM=0.205
2024-12-08 18:14:34,719 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=61.2 pTM=0.417 ipTM=0.211 tol=15.2
2024-12-08 18:15:38,002 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=62.6 pTM=0.412 ipTM=0.192 tol=11.4
2024-12-08 18:16:41,234 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=62.7 pTM=0.41 ipTM=0.196 tol=8.11
2024-12-08 18:17:44,468 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=62.6 pTM=0.406 ipTM=0.182 tol=4.51
2024-12-08 18:18:47,665 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=62.6 pTM=0.413 ipTM=0.213 tol=10.2
2024-12-08 18:19:50,928 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62.9 pTM=0.408 ipTM=0.183 tol=5.14
2024-12-08 18:20:54,111 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=62.9 pTM=0.411 ipTM=0.184 tol=5
2024-12-08 18:21:57,291 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=62.9 pTM=0.413 ipTM=0.193 tol=7.04
2024-12-08 18:23:00,435 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=62.9 pTM=0.412 ipTM=0.183 tol=3.15
2024-12-08 18:24:03,585 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=63.1 pTM=0.412 ipTM=0.187 tol=6.41
2024-12-08 18:25:06,705 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=63 pTM=0.413 ipTM=0.186 tol=4.95
2024-12-08 18:26:09,892 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=62.8 pTM=0.412 ipTM=0.181 tol=4.1
2024-12-08 18:27:13,065 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=62.6 pTM=0.41 ipTM=0.181 tol=3.93
2024-12-08 18:28:16,301 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=62.8 pTM=0.412 ipTM=0.18 tol=2.51
2024-12-08 18:29:19,523 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=62.9 pTM=0.412 ipTM=0.181 tol=1.63
2024-12-08 18:30:22,713 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=62.9 pTM=0.414 ipTM=0.189 tol=3.28
2024-12-08 18:31:25,930 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62.8 pTM=0.412 ipTM=0.176 tol=3.19
2024-12-08 18:32:29,105 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=62.8 pTM=0.411 ipTM=0.18 tol=2.08
2024-12-08 18:33:32,295 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=62.8 pTM=0.412 ipTM=0.182 tol=3.03
2024-12-08 18:34:35,579 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=62.8 pTM=0.411 ipTM=0.175 tol=4.97
2024-12-08 18:35:38,772 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=62.8 pTM=0.414 ipTM=0.182 tol=2.88
2024-12-08 18:36:41,962 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=63 pTM=0.415 ipTM=0.188 tol=3.54
2024-12-08 18:37:45,241 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.9 pTM=0.411 ipTM=0.18 tol=2.4
2024-12-08 18:38:48,488 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=62.8 pTM=0.414 ipTM=0.182 tol=1.34
2024-12-08 18:39:51,708 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=62.9 pTM=0.414 ipTM=0.182 tol=1.85
2024-12-08 18:40:54,928 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=62.9 pTM=0.412 ipTM=0.179 tol=1.43
2024-12-08 18:41:58,158 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.8 pTM=0.413 ipTM=0.178 tol=2.01
2024-12-08 18:43:01,321 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=63 pTM=0.416 ipTM=0.185 tol=3.89
2024-12-08 18:44:04,454 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=62.9 pTM=0.411 ipTM=0.179 tol=2.82
2024-12-08 18:45:07,601 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=62.8 pTM=0.412 ipTM=0.177 tol=2.4
2024-12-08 18:45:07,602 alphafold2_multimer_v3_model_2_seed_000 took 1959.1s (30 recycles)
2024-12-08 18:46:12,380 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=56.2 pTM=0.385 ipTM=0.197
2024-12-08 18:47:15,551 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=58.1 pTM=0.404 ipTM=0.186 tol=14.8
2024-12-08 18:48:18,633 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=59.7 pTM=0.465 ipTM=0.368 tol=14.6
2024-12-08 18:49:21,728 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=61.3 pTM=0.501 ipTM=0.484 tol=19.4
2024-12-08 18:50:24,836 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=59.9 pTM=0.412 ipTM=0.191 tol=7.52
2024-12-08 18:51:28,046 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=59.2 pTM=0.408 ipTM=0.172 tol=16.8
2024-12-08 18:52:31,218 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=59.7 pTM=0.416 ipTM=0.211 tol=14.7
2024-12-08 18:53:34,374 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=59.8 pTM=0.41 ipTM=0.195 tol=6.68
2024-12-08 18:54:37,575 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=59.7 pTM=0.412 ipTM=0.207 tol=7.73
2024-12-08 18:55:40,739 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=59.7 pTM=0.405 ipTM=0.169 tol=5.32
2024-12-08 18:56:43,795 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=61.2 pTM=0.472 ipTM=0.385 tol=8.09
2024-12-08 18:57:46,912 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=60.2 pTM=0.414 ipTM=0.187 tol=5.29
2024-12-08 18:58:50,118 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=59.7 pTM=0.406 ipTM=0.173 tol=9.56
2024-12-08 18:59:53,213 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=60.6 pTM=0.453 ipTM=0.325 tol=9.78
2024-12-08 19:00:56,374 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=60 pTM=0.421 ipTM=0.219 tol=4.17
2024-12-08 19:01:59,640 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=59.3 pTM=0.41 ipTM=0.177 tol=17.2
2024-12-08 19:03:02,878 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=59.3 pTM=0.406 ipTM=0.174 tol=8.77
2024-12-08 19:04:06,082 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=59.2 pTM=0.408 ipTM=0.177 tol=4.25
2024-12-08 19:05:09,263 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=59.3 pTM=0.411 ipTM=0.181 tol=3.79
2024-12-08 19:06:12,423 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=59.1 pTM=0.417 ipTM=0.216 tol=6.55
2024-12-08 19:07:15,634 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=59.4 pTM=0.411 ipTM=0.188 tol=10.4
2024-12-08 19:08:18,821 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=59.9 pTM=0.418 ipTM=0.219 tol=6.99
2024-12-08 19:09:22,051 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=59.5 pTM=0.407 ipTM=0.181 tol=9.19
2024-12-08 19:10:25,267 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=59.7 pTM=0.408 ipTM=0.175 tol=5.63
2024-12-08 19:11:28,413 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=59.8 pTM=0.415 ipTM=0.187 tol=8.6
2024-12-08 19:12:31,502 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=60.7 pTM=0.442 ipTM=0.304 tol=5.53
2024-12-08 19:13:34,696 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=59.7 pTM=0.408 ipTM=0.182 tol=6.1
2024-12-08 19:14:38,066 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=60 pTM=0.41 ipTM=0.184 tol=14.8
2024-12-08 19:15:41,155 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=60.5 pTM=0.454 ipTM=0.33 tol=16.4
2024-12-08 19:16:44,357 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=60.2 pTM=0.416 ipTM=0.192 tol=6.58
2024-12-08 19:17:47,704 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60 pTM=0.409 ipTM=0.18 tol=14
2024-12-08 19:17:47,706 alphafold2_multimer_v3_model_3_seed_000 took 1958.4s (30 recycles)
2024-12-08 19:18:52,585 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=56.6 pTM=0.391 ipTM=0.198
2024-12-08 19:19:55,779 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=58 pTM=0.429 ipTM=0.324 tol=19
2024-12-08 19:20:59,069 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=60 pTM=0.41 ipTM=0.195 tol=10.7
2024-12-08 19:22:02,374 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=59.4 pTM=0.41 ipTM=0.215 tol=7.61
2024-12-08 19:23:05,803 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=60.1 pTM=0.404 ipTM=0.178 tol=6.09
2024-12-08 19:24:09,212 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=59.7 pTM=0.407 ipTM=0.185 tol=5.86
2024-12-08 19:25:12,548 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=60.4 pTM=0.407 ipTM=0.182 tol=4.92
2024-12-08 19:26:15,781 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=59.3 pTM=0.422 ipTM=0.244 tol=5.63
2024-12-08 19:27:18,925 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=60 pTM=0.469 ipTM=0.387 tol=5.92
2024-12-08 19:28:22,170 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=60.5 pTM=0.41 ipTM=0.201 tol=5.17
2024-12-08 19:29:25,429 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=60.2 pTM=0.406 ipTM=0.193 tol=4.56
2024-12-08 19:30:28,603 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=60 pTM=0.427 ipTM=0.264 tol=3.45
2024-12-08 19:31:31,874 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=60.3 pTM=0.411 ipTM=0.193 tol=5.97
2024-12-08 19:32:35,088 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=59.3 pTM=0.456 ipTM=0.368 tol=7.23
2024-12-08 19:33:38,347 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=60.4 pTM=0.414 ipTM=0.216 tol=6.39
2024-12-08 19:34:41,625 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=60.6 pTM=0.406 ipTM=0.195 tol=4.96
2024-12-08 19:35:44,816 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=59.9 pTM=0.417 ipTM=0.22 tol=5.7
2024-12-08 19:36:48,068 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=60.3 pTM=0.407 ipTM=0.182 tol=5.99
2024-12-08 19:37:51,215 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=59.4 pTM=0.464 ipTM=0.384 tol=6.46
2024-12-08 19:38:54,553 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=60.1 pTM=0.406 ipTM=0.194 tol=4.91
2024-12-08 19:39:57,871 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=59.8 pTM=0.409 ipTM=0.198 tol=4.52
2024-12-08 19:41:01,230 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=60.5 pTM=0.41 ipTM=0.178 tol=5.39
2024-12-08 19:42:04,476 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=59.8 pTM=0.437 ipTM=0.296 tol=7.98
2024-12-08 19:43:07,780 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=60.3 pTM=0.41 ipTM=0.186 tol=6.77
2024-12-08 19:44:10,944 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=59.6 pTM=0.474 ipTM=0.41 tol=7.74
2024-12-08 19:45:14,246 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60.7 pTM=0.414 ipTM=0.21 tol=4.68
2024-12-08 19:46:17,513 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=60.5 pTM=0.409 ipTM=0.2 tol=5.45
2024-12-08 19:47:20,754 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=60.1 pTM=0.416 ipTM=0.217 tol=6.18
2024-12-08 19:48:23,907 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=59.7 pTM=0.464 ipTM=0.388 tol=7.58
2024-12-08 19:49:27,184 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=60.1 pTM=0.411 ipTM=0.217 tol=8.52
2024-12-08 19:50:30,507 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=60.3 pTM=0.405 ipTM=0.193 tol=4.7
2024-12-08 19:50:30,508 alphafold2_multimer_v3_model_4_seed_000 took 1961.1s (30 recycles)
2024-12-08 19:51:35,535 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=55.8 pTM=0.388 ipTM=0.188
2024-12-08 19:52:38,865 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=57.4 pTM=0.396 ipTM=0.188 tol=21.6
2024-12-08 19:53:42,108 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=58.3 pTM=0.395 ipTM=0.213 tol=12
2024-12-08 19:54:45,377 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=59 pTM=0.4 ipTM=0.18 tol=6.13
2024-12-08 19:55:48,572 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=59.5 pTM=0.406 ipTM=0.178 tol=5.91
2024-12-08 19:56:51,791 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=59.7 pTM=0.406 ipTM=0.18 tol=5.62
2024-12-08 19:57:55,043 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=59.8 pTM=0.408 ipTM=0.185 tol=3.85
2024-12-08 19:58:58,369 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=59.9 pTM=0.405 ipTM=0.175 tol=4.91
2024-12-08 20:00:01,660 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=59.5 pTM=0.406 ipTM=0.176 tol=2.31
2024-12-08 20:01:04,925 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=59.7 pTM=0.407 ipTM=0.176 tol=5.2
2024-12-08 20:02:08,202 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=59.8 pTM=0.407 ipTM=0.176 tol=3.67
2024-12-08 20:03:11,539 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=59.7 pTM=0.408 ipTM=0.177 tol=3.98
2024-12-08 20:04:14,812 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=59.7 pTM=0.408 ipTM=0.178 tol=6.91
2024-12-08 20:05:18,115 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=59.7 pTM=0.41 ipTM=0.214 tol=4.89
2024-12-08 20:06:21,410 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=60.1 pTM=0.414 ipTM=0.211 tol=5.22
2024-12-08 20:07:24,666 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=59.9 pTM=0.415 ipTM=0.201 tol=4.04
2024-12-08 20:08:27,839 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=59.8 pTM=0.42 ipTM=0.229 tol=4.74
2024-12-08 20:09:31,099 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=60.2 pTM=0.41 ipTM=0.191 tol=5.35
2024-12-08 20:10:34,289 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=59.8 pTM=0.414 ipTM=0.204 tol=3.23
2024-12-08 20:11:37,536 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=59.9 pTM=0.407 ipTM=0.191 tol=4.65
2024-12-08 20:12:40,757 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=59.8 pTM=0.409 ipTM=0.184 tol=4.16
2024-12-08 20:13:44,029 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=59.9 pTM=0.407 ipTM=0.178 tol=5.55
2024-12-08 20:14:47,258 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=59.7 pTM=0.408 ipTM=0.185 tol=3.85
2024-12-08 20:15:50,516 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=59.8 pTM=0.408 ipTM=0.191 tol=3.66
2024-12-08 20:16:53,761 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=59.9 pTM=0.408 ipTM=0.196 tol=3.29
2024-12-08 20:17:57,020 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=60.1 pTM=0.411 ipTM=0.187 tol=3.59
2024-12-08 20:19:00,252 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=59.8 pTM=0.411 ipTM=0.184 tol=2.66
2024-12-08 20:20:03,524 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=60 pTM=0.409 ipTM=0.183 tol=2.98
2024-12-08 20:21:06,788 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=59.7 pTM=0.409 ipTM=0.182 tol=3.7
2024-12-08 20:22:10,041 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=59.7 pTM=0.407 ipTM=0.183 tol=3.7
2024-12-08 20:23:13,246 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=59.7 pTM=0.41 ipTM=0.181 tol=4.13
2024-12-08 20:23:13,248 alphafold2_multimer_v3_model_5_seed_000 took 1961.0s (30 recycles)
2024-12-08 20:23:14,942 reranking models by 'multimer' metric
2024-12-08 20:23:16,995 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 20:28:29,813 Relaxation took 314.9s
2024-12-08 20:28:29,814 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=60.7 pTM=0.405 ipTM=0.214
2024-12-08 20:33:32,553 Relaxation took 302.7s
2024-12-08 20:33:32,554 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=60.3 pTM=0.405 ipTM=0.193
2024-12-08 20:39:56,961 Relaxation took 384.4s
2024-12-08 20:39:56,962 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=59.7 pTM=0.41 ipTM=0.181
2024-12-08 20:45:03,421 Relaxation took 306.5s
2024-12-08 20:45:03,422 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60 pTM=0.409 ipTM=0.18
2024-12-08 20:49:25,873 Relaxation took 262.4s
2024-12-08 20:49:25,873 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=62.8 pTM=0.412 ipTM=0.177
2024-12-08 20:49:29,777 Done