2024-12-08 17:46:32,817 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 17:46:33,177 Running on GPU
2024-12-08 17:46:35,565 Found 6 citations for tools or databases
2024-12-08 17:46:35,565 Query 1/1: TOPORS_ABT1 (length 1317)
2024-12-08 17:46:35,850 Sleeping for 7s. Reason: PENDING
2024-12-08 17:46:43,108 Sleeping for 7s. Reason: PENDING
2024-12-08 17:46:50,369 Sleeping for 8s. Reason: RUNNING
2024-12-08 17:46:58,626 Sleeping for 6s. Reason: RUNNING
2024-12-08 17:47:04,886 Sleeping for 8s. Reason: RUNNING
2024-12-08 17:47:13,151 Sleeping for 5s. Reason: RUNNING
2024-12-08 17:47:18,408 Sleeping for 9s. Reason: RUNNING
2024-12-08 17:47:27,667 Sleeping for 8s. Reason: RUNNING
2024-12-08 17:47:35,930 Sleeping for 8s. Reason: RUNNING
2024-12-08 17:47:44,192 Sleeping for 9s. Reason: RUNNING
2024-12-08 17:47:53,451 Sleeping for 9s. Reason: RUNNING
2024-12-08 17:48:02,717 Sleeping for 9s. Reason: RUNNING
2024-12-08 17:48:11,973 Sleeping for 9s. Reason: RUNNING
2024-12-08 17:48:21,229 Sleeping for 7s. Reason: RUNNING
2024-12-08 17:48:28,487 Sleeping for 8s. Reason: RUNNING
2024-12-08 17:48:36,747 Sleeping for 7s. Reason: RUNNING
2024-12-08 17:48:45,595 Sleeping for 9s. Reason: PENDING
2024-12-08 17:48:54,864 Sleeping for 10s. Reason: RUNNING
2024-12-08 17:49:05,125 Sleeping for 5s. Reason: RUNNING
2024-12-08 17:49:10,387 Sleeping for 6s. Reason: RUNNING
2024-12-08 17:49:16,647 Sleeping for 10s. Reason: RUNNING
2024-12-08 17:49:26,914 Sleeping for 5s. Reason: RUNNING
2024-12-08 17:49:32,170 Sleeping for 5s. Reason: RUNNING
2024-12-08 17:49:37,428 Sleeping for 10s. Reason: RUNNING
2024-12-08 17:49:47,694 Sleeping for 9s. Reason: RUNNING
2024-12-08 17:49:56,976 Sleeping for 5s. Reason: RUNNING
2024-12-08 17:50:02,238 Sleeping for 10s. Reason: RUNNING
2024-12-08 17:50:17,375 Setting max_seq=508, max_extra_seq=2048
2024-12-08 17:54:42,358 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=33.6 pTM=0.257 ipTM=0.227
2024-12-08 17:55:29,732 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=33.4 pTM=0.259 ipTM=0.218 tol=22.5
2024-12-08 17:56:17,356 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=33.3 pTM=0.259 ipTM=0.209 tol=14.1
2024-12-08 17:57:05,091 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=33.5 pTM=0.255 ipTM=0.202 tol=10.9
2024-12-08 17:57:52,875 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=33.4 pTM=0.257 ipTM=0.207 tol=10.6
2024-12-08 17:58:40,711 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=33.5 pTM=0.255 ipTM=0.204 tol=9.54
2024-12-08 17:59:28,579 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=33.2 pTM=0.255 ipTM=0.205 tol=4.24
2024-12-08 18:00:16,418 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=33.3 pTM=0.255 ipTM=0.216 tol=4.79
2024-12-08 18:01:04,269 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=33.5 pTM=0.256 ipTM=0.204 tol=5.36
2024-12-08 18:01:52,107 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=33.6 pTM=0.255 ipTM=0.209 tol=4.81
2024-12-08 18:02:39,935 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=33.7 pTM=0.257 ipTM=0.213 tol=10.8
2024-12-08 18:03:27,795 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=33.5 pTM=0.255 ipTM=0.224 tol=9.16
2024-12-08 18:04:15,635 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=33.6 pTM=0.257 ipTM=0.215 tol=5
2024-12-08 18:05:03,480 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=33.4 pTM=0.255 ipTM=0.216 tol=3.44
2024-12-08 18:05:51,328 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=33.4 pTM=0.256 ipTM=0.211 tol=14.1
2024-12-08 18:06:39,139 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=33.5 pTM=0.255 ipTM=0.21 tol=13.3
2024-12-08 18:07:26,982 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=33.5 pTM=0.255 ipTM=0.206 tol=9.55
2024-12-08 18:08:14,855 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=33.6 pTM=0.255 ipTM=0.207 tol=6.32
2024-12-08 18:09:02,672 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=33.5 pTM=0.257 ipTM=0.203 tol=10.7
2024-12-08 18:09:50,493 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=33.6 pTM=0.256 ipTM=0.217 tol=5.78
2024-12-08 18:10:38,308 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=33.6 pTM=0.256 ipTM=0.207 tol=3.99
2024-12-08 18:11:26,143 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=33.8 pTM=0.254 ipTM=0.204 tol=4.35
2024-12-08 18:12:13,967 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=33.5 pTM=0.257 ipTM=0.205 tol=11.7
2024-12-08 18:13:01,789 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=33.5 pTM=0.256 ipTM=0.21 tol=9.92
2024-12-08 18:13:49,616 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=33.5 pTM=0.255 ipTM=0.201 tol=4.32
2024-12-08 18:14:37,433 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=33.5 pTM=0.255 ipTM=0.2 tol=3.75
2024-12-08 18:15:25,262 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=33.4 pTM=0.256 ipTM=0.203 tol=4.21
2024-12-08 18:16:13,074 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=33.5 pTM=0.257 ipTM=0.214 tol=3.45
2024-12-08 18:17:00,874 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=33.4 pTM=0.257 ipTM=0.206 tol=10.3
2024-12-08 18:17:48,693 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=33.5 pTM=0.257 ipTM=0.204 tol=14.2
2024-12-08 18:18:36,513 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=33.6 pTM=0.255 ipTM=0.205 tol=12.8
2024-12-08 18:18:36,514 alphafold2_multimer_v3_model_1_seed_000 took 1692.2s (30 recycles)
2024-12-08 18:19:25,545 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=34.8 pTM=0.258 ipTM=0.214
2024-12-08 18:20:13,344 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=35.8 pTM=0.26 ipTM=0.242 tol=24.7
2024-12-08 18:21:01,086 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=35.9 pTM=0.268 ipTM=0.229 tol=10.8
2024-12-08 18:21:48,837 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=36 pTM=0.269 ipTM=0.24 tol=8.33
2024-12-08 18:22:36,598 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=36.2 pTM=0.273 ipTM=0.258 tol=6.82
2024-12-08 18:23:24,383 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=36.1 pTM=0.27 ipTM=0.253 tol=6.9
2024-12-08 18:24:12,127 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=36.2 pTM=0.272 ipTM=0.266 tol=6.67
2024-12-08 18:24:59,900 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=36.2 pTM=0.27 ipTM=0.257 tol=5.86
2024-12-08 18:25:47,637 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=36.1 pTM=0.272 ipTM=0.263 tol=6.77
2024-12-08 18:26:35,455 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=36.2 pTM=0.269 ipTM=0.248 tol=10.1
2024-12-08 18:27:23,270 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=36.3 pTM=0.273 ipTM=0.26 tol=5.6
2024-12-08 18:28:11,116 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=36.1 pTM=0.27 ipTM=0.253 tol=3.64
2024-12-08 18:28:58,953 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=36.2 pTM=0.27 ipTM=0.247 tol=9.9
2024-12-08 18:29:46,768 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=36.2 pTM=0.271 ipTM=0.256 tol=5.41
2024-12-08 18:30:34,622 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=36.3 pTM=0.272 ipTM=0.256 tol=7.6
2024-12-08 18:31:22,460 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=36.2 pTM=0.271 ipTM=0.255 tol=7.98
2024-12-08 18:32:10,273 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=36.2 pTM=0.27 ipTM=0.253 tol=8.73
2024-12-08 18:32:58,088 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=36.2 pTM=0.27 ipTM=0.25 tol=8.65
2024-12-08 18:33:45,901 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=36.2 pTM=0.271 ipTM=0.253 tol=4.98
2024-12-08 18:34:33,718 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=36.2 pTM=0.27 ipTM=0.249 tol=9.15
2024-12-08 18:35:21,532 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=36.1 pTM=0.269 ipTM=0.249 tol=7.74
2024-12-08 18:36:09,356 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=36.2 pTM=0.27 ipTM=0.254 tol=9.27
2024-12-08 18:36:57,187 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=36.1 pTM=0.267 ipTM=0.24 tol=3.86
2024-12-08 18:37:45,094 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=35.9 pTM=0.265 ipTM=0.234 tol=4.47
2024-12-08 18:38:32,959 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=35.7 pTM=0.263 ipTM=0.223 tol=4.48
2024-12-08 18:39:20,799 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=35.8 pTM=0.265 ipTM=0.232 tol=5.54
2024-12-08 18:40:08,701 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=34 pTM=0.276 ipTM=0.287 tol=22.9
2024-12-08 18:40:56,585 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=35.2 pTM=0.255 ipTM=0.188 tol=19.3
2024-12-08 18:41:44,447 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=35.6 pTM=0.262 ipTM=0.221 tol=14.5
2024-12-08 18:42:32,354 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=33.3 pTM=0.307 ipTM=0.435 tol=21
2024-12-08 18:43:20,190 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=35 pTM=0.251 ipTM=0.176 tol=17.2
2024-12-08 18:43:20,191 alphafold2_multimer_v3_model_2_seed_000 took 1482.4s (30 recycles)
2024-12-08 18:44:09,528 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=35.6 pTM=0.257 ipTM=0.195
2024-12-08 18:44:57,678 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=35.3 pTM=0.251 ipTM=0.182 tol=17.7
2024-12-08 18:45:45,851 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=35.4 pTM=0.261 ipTM=0.226 tol=14.7
2024-12-08 18:46:34,030 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=35.5 pTM=0.258 ipTM=0.216 tol=11.1
2024-12-08 18:47:22,184 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=35.7 pTM=0.26 ipTM=0.227 tol=8.13
2024-12-08 18:48:10,354 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=35.7 pTM=0.261 ipTM=0.227 tol=7.39
2024-12-08 18:48:58,541 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=35.6 pTM=0.263 ipTM=0.242 tol=5.98
2024-12-08 18:49:46,772 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=35.4 pTM=0.257 ipTM=0.212 tol=7.44
2024-12-08 18:50:35,025 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=34.7 pTM=0.25 ipTM=0.184 tol=14.1
2024-12-08 18:51:23,252 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=35 pTM=0.25 ipTM=0.191 tol=9.34
2024-12-08 18:52:11,443 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=33.1 pTM=0.301 ipTM=0.444 tol=25.6
2024-12-08 18:52:59,639 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=34 pTM=0.242 ipTM=0.167 tol=27.5
2024-12-08 18:53:47,914 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=34.5 pTM=0.246 ipTM=0.173 tol=20.6
2024-12-08 18:54:36,188 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=34.9 pTM=0.248 ipTM=0.186 tol=11.4
2024-12-08 18:55:24,423 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=34.9 pTM=0.25 ipTM=0.194 tol=8.07
2024-12-08 18:56:12,658 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=34.7 pTM=0.253 ipTM=0.202 tol=6.48
2024-12-08 18:57:00,874 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=34.8 pTM=0.255 ipTM=0.212 tol=7.24
2024-12-08 18:57:49,044 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=35 pTM=0.256 ipTM=0.216 tol=7.71
2024-12-08 18:58:37,249 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=34.9 pTM=0.258 ipTM=0.221 tol=7.82
2024-12-08 18:59:25,466 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=35.1 pTM=0.26 ipTM=0.228 tol=5.64
2024-12-08 19:00:13,692 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=35.2 pTM=0.258 ipTM=0.229 tol=4.77
2024-12-08 19:01:01,913 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=35.2 pTM=0.261 ipTM=0.239 tol=4.6
2024-12-08 19:01:50,158 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=35.2 pTM=0.261 ipTM=0.239 tol=4.41
2024-12-08 19:02:38,397 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=35.2 pTM=0.257 ipTM=0.225 tol=4.55
2024-12-08 19:03:26,691 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=34.8 pTM=0.248 ipTM=0.185 tol=8.61
2024-12-08 19:04:14,955 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=34.9 pTM=0.256 ipTM=0.218 tol=9.14
2024-12-08 19:05:03,242 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=35 pTM=0.259 ipTM=0.227 tol=8.77
2024-12-08 19:05:51,499 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=34.8 pTM=0.258 ipTM=0.215 tol=6.97
2024-12-08 19:06:39,779 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=34.3 pTM=0.256 ipTM=0.229 tol=14.1
2024-12-08 19:07:28,090 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=34.7 pTM=0.246 ipTM=0.178 tol=13.3
2024-12-08 19:08:16,358 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=35 pTM=0.255 ipTM=0.211 tol=10.7
2024-12-08 19:08:16,359 alphafold2_multimer_v3_model_3_seed_000 took 1494.8s (30 recycles)
2024-12-08 19:09:05,631 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=32.8 pTM=0.256 ipTM=0.246
2024-12-08 19:09:53,728 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=32.8 pTM=0.253 ipTM=0.209 tol=17
2024-12-08 19:10:41,802 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=33.1 pTM=0.256 ipTM=0.206 tol=13.5
2024-12-08 19:11:29,930 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=33.3 pTM=0.255 ipTM=0.193 tol=9.01
2024-12-08 19:12:18,042 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=33.3 pTM=0.257 ipTM=0.202 tol=10.8
2024-12-08 19:13:06,226 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=33.4 pTM=0.256 ipTM=0.202 tol=10.2
2024-12-08 19:13:54,405 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=33.1 pTM=0.257 ipTM=0.215 tol=8.43
2024-12-08 19:14:42,601 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=33.2 pTM=0.255 ipTM=0.198 tol=6.97
2024-12-08 19:15:30,793 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=33.3 pTM=0.256 ipTM=0.202 tol=7.22
2024-12-08 19:16:18,989 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=33.3 pTM=0.256 ipTM=0.202 tol=7.21
2024-12-08 19:17:07,169 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=33.2 pTM=0.26 ipTM=0.214 tol=7.79
2024-12-08 19:17:55,369 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=33.2 pTM=0.255 ipTM=0.204 tol=7.47
2024-12-08 19:18:43,614 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=33.2 pTM=0.257 ipTM=0.225 tol=6.23
2024-12-08 19:19:31,765 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=33.2 pTM=0.256 ipTM=0.205 tol=5.13
2024-12-08 19:20:19,936 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=33.5 pTM=0.254 ipTM=0.214 tol=8.71
2024-12-08 19:21:08,124 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=33.3 pTM=0.254 ipTM=0.201 tol=7.88
2024-12-08 19:21:56,312 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=33.5 pTM=0.255 ipTM=0.219 tol=6.39
2024-12-08 19:22:44,480 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=33.6 pTM=0.254 ipTM=0.198 tol=6.94
2024-12-08 19:23:32,645 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=33.4 pTM=0.257 ipTM=0.214 tol=8.84
2024-12-08 19:24:20,807 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=33.5 pTM=0.255 ipTM=0.205 tol=6.45
2024-12-08 19:25:08,989 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=33.7 pTM=0.258 ipTM=0.218 tol=7.73
2024-12-08 19:25:57,155 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=33.8 pTM=0.254 ipTM=0.198 tol=6.18
2024-12-08 19:26:45,267 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=33.4 pTM=0.259 ipTM=0.215 tol=6.69
2024-12-08 19:27:33,397 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=33.6 pTM=0.257 ipTM=0.208 tol=5.79
2024-12-08 19:28:21,527 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=33.7 pTM=0.258 ipTM=0.21 tol=5.43
2024-12-08 19:29:09,627 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=33.6 pTM=0.253 ipTM=0.195 tol=6.59
2024-12-08 19:29:57,742 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=33.5 pTM=0.257 ipTM=0.211 tol=7.3
2024-12-08 19:30:45,871 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=33.4 pTM=0.254 ipTM=0.202 tol=7.77
2024-12-08 19:31:34,013 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=33.6 pTM=0.257 ipTM=0.21 tol=8.42
2024-12-08 19:32:22,198 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=33.3 pTM=0.253 ipTM=0.194 tol=8.23
2024-12-08 19:33:10,360 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=33.6 pTM=0.254 ipTM=0.201 tol=7.5
2024-12-08 19:33:10,362 alphafold2_multimer_v3_model_4_seed_000 took 1492.7s (30 recycles)
2024-12-08 19:33:59,911 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=34.8 pTM=0.254 ipTM=0.184
2024-12-08 19:34:48,227 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=35.3 pTM=0.253 ipTM=0.179 tol=18.8
2024-12-08 19:35:36,547 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=35.6 pTM=0.257 ipTM=0.192 tol=15.4
2024-12-08 19:36:24,897 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=35.4 pTM=0.256 ipTM=0.198 tol=12.7
2024-12-08 19:37:13,236 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=35.8 pTM=0.258 ipTM=0.206 tol=6.84
2024-12-08 19:38:01,567 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=35.8 pTM=0.259 ipTM=0.212 tol=6.79
2024-12-08 19:38:49,936 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=35.7 pTM=0.259 ipTM=0.209 tol=11.1
2024-12-08 19:39:38,313 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=35.7 pTM=0.257 ipTM=0.208 tol=12.4
2024-12-08 19:40:26,674 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=35.8 pTM=0.259 ipTM=0.211 tol=7.75
2024-12-08 19:41:15,056 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=35.8 pTM=0.254 ipTM=0.19 tol=6.6
2024-12-08 19:42:03,443 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=35.9 pTM=0.255 ipTM=0.192 tol=7.23
2024-12-08 19:42:51,817 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=35.6 pTM=0.25 ipTM=0.176 tol=7.72
2024-12-08 19:43:40,181 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=35.7 pTM=0.255 ipTM=0.188 tol=7.46
2024-12-08 19:44:28,537 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=35.9 pTM=0.25 ipTM=0.181 tol=7.76
2024-12-08 19:45:16,891 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=35.9 pTM=0.255 ipTM=0.193 tol=6.74
2024-12-08 19:46:05,229 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=35.8 pTM=0.25 ipTM=0.178 tol=11.2
2024-12-08 19:46:53,580 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=35.8 pTM=0.253 ipTM=0.188 tol=13.9
2024-12-08 19:47:41,962 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=35.8 pTM=0.25 ipTM=0.177 tol=6.93
2024-12-08 19:48:30,348 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=35.7 pTM=0.254 ipTM=0.184 tol=8.98
2024-12-08 19:49:18,740 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=35.8 pTM=0.254 ipTM=0.189 tol=8.12
2024-12-08 19:50:07,141 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=35.9 pTM=0.251 ipTM=0.179 tol=13.2
2024-12-08 19:50:55,524 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=35.9 pTM=0.253 ipTM=0.187 tol=8.49
2024-12-08 19:51:43,940 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=35.9 pTM=0.252 ipTM=0.181 tol=13.6
2024-12-08 19:52:32,334 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=35.8 pTM=0.25 ipTM=0.177 tol=6.89
2024-12-08 19:53:20,698 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=35.9 pTM=0.251 ipTM=0.18 tol=6.12
2024-12-08 19:54:09,057 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=35.8 pTM=0.251 ipTM=0.184 tol=5.63
2024-12-08 19:54:57,419 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=35.8 pTM=0.252 ipTM=0.184 tol=11.8
2024-12-08 19:55:45,797 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=35.8 pTM=0.253 ipTM=0.186 tol=7.89
2024-12-08 19:56:34,165 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=35.8 pTM=0.255 ipTM=0.198 tol=13.3
2024-12-08 19:57:22,534 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=35.7 pTM=0.255 ipTM=0.195 tol=5.77
2024-12-08 19:58:10,904 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=35.8 pTM=0.254 ipTM=0.189 tol=11
2024-12-08 19:58:10,906 alphafold2_multimer_v3_model_5_seed_000 took 1499.2s (30 recycles)
2024-12-08 19:58:12,233 reranking models by 'multimer' metric
2024-12-08 19:58:15,877 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 20:02:37,581 Relaxation took 265.3s
2024-12-08 20:02:37,581 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=35 pTM=0.255 ipTM=0.211
2024-12-08 20:05:56,324 Relaxation took 198.7s
2024-12-08 20:05:56,324 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=33.6 pTM=0.255 ipTM=0.205
2024-12-08 20:09:29,241 Relaxation took 212.9s
2024-12-08 20:09:29,241 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=33.6 pTM=0.254 ipTM=0.201
2024-12-08 20:34:12,767 Relaxation took 1483.5s
2024-12-08 20:34:12,768 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=35.8 pTM=0.254 ipTM=0.189
2024-12-08 20:39:27,506 Relaxation took 314.7s
2024-12-08 20:39:27,506 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=35 pTM=0.251 ipTM=0.176
2024-12-08 20:39:30,855 Done