2024-12-08 18:26:54,945 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 18:26:55,252 Running on GPU
2024-12-08 18:26:58,377 Found 6 citations for tools or databases
2024-12-08 18:26:58,377 Query 1/1: TRAF2_BCL10 (length 734)
2024-12-08 18:26:58,648 Sleeping for 7s. Reason: PENDING
2024-12-08 18:27:05,910 Sleeping for 8s. Reason: PENDING
2024-12-08 18:27:14,167 Sleeping for 10s. Reason: PENDING
2024-12-08 18:27:24,431 Sleeping for 8s. Reason: PENDING
2024-12-08 18:27:32,691 Sleeping for 9s. Reason: PENDING
2024-12-08 18:27:41,945 Sleeping for 8s. Reason: PENDING
2024-12-08 18:27:50,203 Sleeping for 8s. Reason: PENDING
2024-12-08 18:27:58,457 Sleeping for 9s. Reason: PENDING
2024-12-08 18:28:07,718 Sleeping for 7s. Reason: PENDING
2024-12-08 18:28:14,969 Sleeping for 8s. Reason: PENDING
2024-12-08 18:28:23,243 Sleeping for 10s. Reason: PENDING
2024-12-08 18:28:33,502 Sleeping for 5s. Reason: PENDING
2024-12-08 18:28:38,757 Sleeping for 9s. Reason: PENDING
2024-12-08 18:28:48,025 Sleeping for 6s. Reason: PENDING
2024-12-08 18:28:54,288 Sleeping for 8s. Reason: PENDING
2024-12-08 18:29:02,541 Sleeping for 9s. Reason: PENDING
2024-12-08 18:29:11,802 Sleeping for 6s. Reason: PENDING
2024-12-08 18:29:18,053 Sleeping for 8s. Reason: PENDING
2024-12-08 18:29:26,313 Sleeping for 8s. Reason: PENDING
2024-12-08 18:29:34,578 Sleeping for 9s. Reason: PENDING
2024-12-08 18:29:43,839 Sleeping for 10s. Reason: PENDING
2024-12-08 18:29:54,110 Sleeping for 5s. Reason: PENDING
2024-12-08 18:29:59,364 Sleeping for 9s. Reason: PENDING
2024-12-08 18:30:08,615 Sleeping for 10s. Reason: PENDING
2024-12-08 18:30:18,877 Sleeping for 6s. Reason: PENDING
2024-12-08 18:30:25,133 Sleeping for 10s. Reason: PENDING
2024-12-08 18:30:35,397 Sleeping for 7s. Reason: PENDING
2024-12-08 18:30:42,660 Sleeping for 9s. Reason: PENDING
2024-12-08 18:30:51,926 Sleeping for 7s. Reason: PENDING
2024-12-08 18:30:59,180 Sleeping for 5s. Reason: PENDING
2024-12-08 18:31:04,436 Sleeping for 8s. Reason: PENDING
2024-12-08 18:31:12,698 Sleeping for 6s. Reason: PENDING
2024-12-08 18:31:18,953 Sleeping for 10s. Reason: PENDING
2024-12-08 18:31:29,211 Sleeping for 6s. Reason: PENDING
2024-12-08 18:31:35,472 Sleeping for 6s. Reason: RUNNING
2024-12-08 18:31:41,732 Sleeping for 10s. Reason: RUNNING
2024-12-08 18:31:51,990 Sleeping for 5s. Reason: RUNNING
2024-12-08 18:31:57,246 Sleeping for 8s. Reason: RUNNING
2024-12-08 18:32:05,504 Sleeping for 10s. Reason: RUNNING
2024-12-08 18:32:15,771 Sleeping for 8s. Reason: RUNNING
2024-12-08 18:32:24,039 Sleeping for 7s. Reason: RUNNING
2024-12-08 18:32:31,295 Sleeping for 5s. Reason: RUNNING
2024-12-08 18:32:36,556 Sleeping for 7s. Reason: RUNNING
2024-12-08 18:32:43,821 Sleeping for 10s. Reason: RUNNING
2024-12-08 18:32:54,074 Sleeping for 8s. Reason: RUNNING
2024-12-08 18:33:02,332 Sleeping for 7s. Reason: RUNNING
2024-12-08 18:33:11,109 Sleeping for 8s. Reason: PENDING
2024-12-08 18:33:19,364 Sleeping for 7s. Reason: RUNNING
2024-12-08 18:33:26,624 Sleeping for 10s. Reason: RUNNING
2024-12-08 18:33:36,880 Sleeping for 8s. Reason: RUNNING
2024-12-08 18:33:45,137 Sleeping for 5s. Reason: RUNNING
2024-12-08 18:33:50,388 Sleeping for 7s. Reason: RUNNING
2024-12-08 18:33:57,646 Sleeping for 10s. Reason: RUNNING
2024-12-08 18:34:10,301 Setting max_seq=508, max_extra_seq=2048
2024-12-08 18:36:50,529 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=71.8 pTM=0.312 ipTM=0.123
2024-12-08 18:37:01,211 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=70.6 pTM=0.335 ipTM=0.162 tol=9.55
2024-12-08 18:37:11,904 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=70.2 pTM=0.33 ipTM=0.16 tol=5.51
2024-12-08 18:37:22,601 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=70.1 pTM=0.325 ipTM=0.152 tol=4.62
2024-12-08 18:37:33,304 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=70.1 pTM=0.326 ipTM=0.149 tol=2.23
2024-12-08 18:37:44,020 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=69.7 pTM=0.324 ipTM=0.151 tol=1.9
2024-12-08 18:37:54,749 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=69.9 pTM=0.323 ipTM=0.146 tol=1.92
2024-12-08 18:38:05,488 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=69.9 pTM=0.322 ipTM=0.145 tol=1.73
2024-12-08 18:38:16,235 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=70.1 pTM=0.32 ipTM=0.14 tol=1.48
2024-12-08 18:38:26,988 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=70.3 pTM=0.321 ipTM=0.141 tol=1.91
2024-12-08 18:38:37,761 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=70.1 pTM=0.318 ipTM=0.136 tol=1.52
2024-12-08 18:38:48,531 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=70.8 pTM=0.318 ipTM=0.125 tol=2.13
2024-12-08 18:38:59,321 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=70.8 pTM=0.314 ipTM=0.122 tol=5.57
2024-12-08 18:39:10,126 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=71.1 pTM=0.312 ipTM=0.118 tol=33
2024-12-08 18:39:20,933 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=71.6 pTM=0.317 ipTM=0.142 tol=7.86
2024-12-08 18:39:31,732 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=72 pTM=0.318 ipTM=0.175 tol=4.87
2024-12-08 18:39:42,532 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=72.2 pTM=0.318 ipTM=0.161 tol=5.32
2024-12-08 18:39:53,339 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=72.3 pTM=0.317 ipTM=0.178 tol=3.74
2024-12-08 18:40:04,151 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=71.9 pTM=0.316 ipTM=0.152 tol=2.7
2024-12-08 18:40:14,967 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=69.3 pTM=0.315 ipTM=0.158 tol=15.9
2024-12-08 18:40:25,804 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=70.4 pTM=0.312 ipTM=0.123 tol=12.9
2024-12-08 18:40:36,652 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=70.9 pTM=0.312 ipTM=0.117 tol=4.67
2024-12-08 18:40:47,486 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=71.2 pTM=0.314 ipTM=0.127 tol=7
2024-12-08 18:40:58,317 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=71.5 pTM=0.317 ipTM=0.128 tol=10.6
2024-12-08 18:41:09,140 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=71.4 pTM=0.317 ipTM=0.129 tol=3.52
2024-12-08 18:41:19,957 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=71.7 pTM=0.316 ipTM=0.125 tol=5.1
2024-12-08 18:41:30,783 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=71.8 pTM=0.315 ipTM=0.118 tol=3.18
2024-12-08 18:41:41,614 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=71.6 pTM=0.314 ipTM=0.119 tol=3.76
2024-12-08 18:41:52,430 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=72.1 pTM=0.315 ipTM=0.12 tol=4.75
2024-12-08 18:42:03,242 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=71.6 pTM=0.316 ipTM=0.127 tol=3.32
2024-12-08 18:42:14,057 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=72.1 pTM=0.319 ipTM=0.13 tol=2.76
2024-12-08 18:42:14,057 alphafold2_multimer_v3_model_1_seed_000 took 478.6s (30 recycles)
2024-12-08 18:42:25,286 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=68.9 pTM=0.305 ipTM=0.117
2024-12-08 18:42:36,153 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=68.8 pTM=0.325 ipTM=0.151 tol=15.4
2024-12-08 18:42:47,000 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=69.8 pTM=0.317 ipTM=0.128 tol=9.09
2024-12-08 18:42:57,846 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=70.6 pTM=0.318 ipTM=0.125 tol=6.87
2024-12-08 18:43:08,673 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=70.8 pTM=0.322 ipTM=0.129 tol=4.5
2024-12-08 18:43:19,498 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=70.5 pTM=0.321 ipTM=0.129 tol=5.66
2024-12-08 18:43:30,323 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=70.9 pTM=0.324 ipTM=0.138 tol=5.18
2024-12-08 18:43:41,154 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=71.1 pTM=0.321 ipTM=0.132 tol=3.98
2024-12-08 18:43:51,981 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=71.1 pTM=0.321 ipTM=0.133 tol=1.82
2024-12-08 18:44:02,803 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=71.4 pTM=0.323 ipTM=0.138 tol=2.5
2024-12-08 18:44:13,620 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=70.8 pTM=0.321 ipTM=0.135 tol=2.22
2024-12-08 18:44:24,443 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=71.4 pTM=0.324 ipTM=0.133 tol=4.3
2024-12-08 18:44:35,272 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=71.4 pTM=0.321 ipTM=0.131 tol=3.46
2024-12-08 18:44:46,105 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=71.1 pTM=0.318 ipTM=0.128 tol=2.23
2024-12-08 18:44:56,942 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=71.3 pTM=0.318 ipTM=0.127 tol=2.78
2024-12-08 18:45:07,782 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=71.6 pTM=0.32 ipTM=0.127 tol=1.83
2024-12-08 18:45:18,614 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=71.5 pTM=0.319 ipTM=0.13 tol=2.31
2024-12-08 18:45:29,453 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=71.2 pTM=0.319 ipTM=0.131 tol=2.13
2024-12-08 18:45:40,286 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=71.1 pTM=0.317 ipTM=0.129 tol=1.96
2024-12-08 18:45:51,116 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=71 pTM=0.318 ipTM=0.129 tol=1.87
2024-12-08 18:46:01,957 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=71.3 pTM=0.316 ipTM=0.126 tol=1.81
2024-12-08 18:46:12,797 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=71.2 pTM=0.317 ipTM=0.13 tol=1.98
2024-12-08 18:46:23,639 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=71.4 pTM=0.318 ipTM=0.13 tol=2.23
2024-12-08 18:46:34,477 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=71.6 pTM=0.319 ipTM=0.127 tol=1.44
2024-12-08 18:46:45,317 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=71.4 pTM=0.318 ipTM=0.128 tol=1.4
2024-12-08 18:46:56,161 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=71.2 pTM=0.32 ipTM=0.132 tol=2.19
2024-12-08 18:47:06,996 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=71.2 pTM=0.318 ipTM=0.126 tol=2.43
2024-12-08 18:47:17,841 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=71.1 pTM=0.317 ipTM=0.127 tol=1.24
2024-12-08 18:47:28,687 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=71.4 pTM=0.317 ipTM=0.124 tol=1.72
2024-12-08 18:47:39,536 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=71.4 pTM=0.318 ipTM=0.125 tol=2.39
2024-12-08 18:47:50,389 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=71.2 pTM=0.318 ipTM=0.127 tol=2.81
2024-12-08 18:47:50,389 alphafold2_multimer_v3_model_2_seed_000 took 336.0s (30 recycles)
2024-12-08 18:48:01,606 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=69.8 pTM=0.327 ipTM=0.14
2024-12-08 18:48:12,472 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=71.1 pTM=0.325 ipTM=0.129 tol=7.83
2024-12-08 18:48:23,330 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=71.1 pTM=0.322 ipTM=0.126 tol=4.04
2024-12-08 18:48:34,190 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=71.2 pTM=0.321 ipTM=0.129 tol=3.72
2024-12-08 18:48:45,059 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=71.1 pTM=0.32 ipTM=0.115 tol=5.07
2024-12-08 18:48:55,921 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=70.7 pTM=0.319 ipTM=0.116 tol=3.69
2024-12-08 18:49:06,783 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=70.7 pTM=0.319 ipTM=0.131 tol=3.58
2024-12-08 18:49:17,644 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=70.4 pTM=0.32 ipTM=0.12 tol=5.15
2024-12-08 18:49:28,494 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=70.8 pTM=0.319 ipTM=0.115 tol=2.12
2024-12-08 18:49:39,345 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=70.5 pTM=0.32 ipTM=0.131 tol=2.04
2024-12-08 18:49:50,202 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=70.4 pTM=0.32 ipTM=0.126 tol=1.59
2024-12-08 18:50:01,059 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=70.6 pTM=0.32 ipTM=0.12 tol=2.04
2024-12-08 18:50:11,913 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=70.3 pTM=0.321 ipTM=0.121 tol=2.26
2024-12-08 18:50:22,765 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=70.6 pTM=0.32 ipTM=0.12 tol=4.27
2024-12-08 18:50:33,623 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=70.4 pTM=0.321 ipTM=0.129 tol=4.68
2024-12-08 18:50:44,479 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=70.4 pTM=0.323 ipTM=0.13 tol=2.83
2024-12-08 18:50:55,330 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=70.4 pTM=0.322 ipTM=0.128 tol=2.34
2024-12-08 18:51:06,178 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=70.4 pTM=0.323 ipTM=0.129 tol=2.59
2024-12-08 18:51:17,029 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=70.4 pTM=0.323 ipTM=0.132 tol=3.24
2024-12-08 18:51:27,882 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=70.6 pTM=0.322 ipTM=0.119 tol=4.2
2024-12-08 18:51:38,738 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=70.5 pTM=0.323 ipTM=0.138 tol=3.76
2024-12-08 18:51:49,595 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=70.3 pTM=0.321 ipTM=0.126 tol=2.09
2024-12-08 18:52:00,452 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=70.4 pTM=0.322 ipTM=0.121 tol=2.28
2024-12-08 18:52:11,309 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=70.7 pTM=0.32 ipTM=0.12 tol=2.67
2024-12-08 18:52:22,170 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=70.2 pTM=0.321 ipTM=0.13 tol=3.03
2024-12-08 18:52:33,026 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=70.3 pTM=0.319 ipTM=0.119 tol=3.71
2024-12-08 18:52:43,880 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=70.6 pTM=0.322 ipTM=0.12 tol=2.61
2024-12-08 18:52:54,731 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=70.4 pTM=0.321 ipTM=0.123 tol=2.38
2024-12-08 18:53:05,582 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=70.4 pTM=0.32 ipTM=0.128 tol=1.87
2024-12-08 18:53:16,440 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=70.2 pTM=0.32 ipTM=0.117 tol=1.74
2024-12-08 18:53:27,302 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=70.5 pTM=0.318 ipTM=0.116 tol=1.67
2024-12-08 18:53:27,303 alphafold2_multimer_v3_model_3_seed_000 took 336.6s (30 recycles)
2024-12-08 18:53:38,555 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=69.4 pTM=0.309 ipTM=0.132
2024-12-08 18:53:49,429 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=69.3 pTM=0.334 ipTM=0.18 tol=13.5
2024-12-08 18:54:00,309 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=70.1 pTM=0.307 ipTM=0.107 tol=27.5
2024-12-08 18:54:11,178 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=70.3 pTM=0.312 ipTM=0.112 tol=14.7
2024-12-08 18:54:22,045 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=70.4 pTM=0.313 ipTM=0.109 tol=6.35
2024-12-08 18:54:32,916 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=70.1 pTM=0.315 ipTM=0.112 tol=3.64
2024-12-08 18:54:43,785 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=70.1 pTM=0.312 ipTM=0.108 tol=4.38
2024-12-08 18:54:54,673 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=69.9 pTM=0.313 ipTM=0.109 tol=3.19
2024-12-08 18:55:05,547 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=70.1 pTM=0.314 ipTM=0.109 tol=3.22
2024-12-08 18:55:16,422 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=70.3 pTM=0.316 ipTM=0.114 tol=1.51
2024-12-08 18:55:27,308 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=70.1 pTM=0.314 ipTM=0.112 tol=2.35
2024-12-08 18:55:38,187 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=70.4 pTM=0.318 ipTM=0.119 tol=3.24
2024-12-08 18:55:49,072 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=70.2 pTM=0.316 ipTM=0.113 tol=2.77
2024-12-08 18:55:59,954 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=70.4 pTM=0.316 ipTM=0.121 tol=2.66
2024-12-08 18:56:10,837 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=70.6 pTM=0.315 ipTM=0.119 tol=1.97
2024-12-08 18:56:21,718 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70.6 pTM=0.319 ipTM=0.126 tol=2.71
2024-12-08 18:56:32,602 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70.6 pTM=0.315 ipTM=0.117 tol=2.42
2024-12-08 18:56:43,487 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=70.6 pTM=0.316 ipTM=0.124 tol=3.47
2024-12-08 18:56:54,364 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=70.6 pTM=0.315 ipTM=0.115 tol=3.87
2024-12-08 18:57:05,236 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=70.6 pTM=0.317 ipTM=0.123 tol=2.36
2024-12-08 18:57:16,129 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70.8 pTM=0.313 ipTM=0.112 tol=2.97
2024-12-08 18:57:27,011 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=70.8 pTM=0.315 ipTM=0.119 tol=2.84
2024-12-08 18:57:37,894 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=70.8 pTM=0.315 ipTM=0.119 tol=2.11
2024-12-08 18:57:48,775 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=70.6 pTM=0.317 ipTM=0.119 tol=3.24
2024-12-08 18:57:59,657 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=70.4 pTM=0.316 ipTM=0.12 tol=1.75
2024-12-08 18:58:10,543 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=70.6 pTM=0.317 ipTM=0.121 tol=1.95
2024-12-08 18:58:21,430 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=70.4 pTM=0.316 ipTM=0.119 tol=2.57
2024-12-08 18:58:32,317 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=70.6 pTM=0.317 ipTM=0.123 tol=1.64
2024-12-08 18:58:43,190 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=70.4 pTM=0.315 ipTM=0.12 tol=1.22
2024-12-08 18:58:54,071 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=70.4 pTM=0.318 ipTM=0.127 tol=1.67
2024-12-08 18:59:04,942 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=70.7 pTM=0.317 ipTM=0.121 tol=1.08
2024-12-08 18:59:04,943 alphafold2_multimer_v3_model_4_seed_000 took 337.3s (30 recycles)
2024-12-08 18:59:16,156 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=69.4 pTM=0.313 ipTM=0.101
2024-12-08 18:59:27,008 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=69.1 pTM=0.317 ipTM=0.113 tol=14.1
2024-12-08 18:59:37,857 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=69.4 pTM=0.313 ipTM=0.111 tol=7.07
2024-12-08 18:59:48,709 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=69.5 pTM=0.313 ipTM=0.112 tol=3.93
2024-12-08 18:59:59,570 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=69.2 pTM=0.309 ipTM=0.105 tol=6.58
2024-12-08 19:00:10,413 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=68.8 pTM=0.312 ipTM=0.108 tol=6
2024-12-08 19:00:21,259 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=69.1 pTM=0.314 ipTM=0.11 tol=4.19
2024-12-08 19:00:32,102 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=69.3 pTM=0.316 ipTM=0.114 tol=2.94
2024-12-08 19:00:42,948 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=69.1 pTM=0.315 ipTM=0.111 tol=4.91
2024-12-08 19:00:53,788 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=69.2 pTM=0.318 ipTM=0.118 tol=3.71
2024-12-08 19:01:04,630 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=69.1 pTM=0.318 ipTM=0.118 tol=2.53
2024-12-08 19:01:15,472 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=69.1 pTM=0.316 ipTM=0.109 tol=5.11
2024-12-08 19:01:26,313 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=69.1 pTM=0.318 ipTM=0.12 tol=4.23
2024-12-08 19:01:37,158 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=69.1 pTM=0.316 ipTM=0.124 tol=3.04
2024-12-08 19:01:48,011 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=68.7 pTM=0.319 ipTM=0.119 tol=3.71
2024-12-08 19:01:58,860 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=68.8 pTM=0.321 ipTM=0.117 tol=2.93
2024-12-08 19:02:09,701 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=69.1 pTM=0.319 ipTM=0.114 tol=3.45
2024-12-08 19:02:20,536 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=69.2 pTM=0.32 ipTM=0.117 tol=4.7
2024-12-08 19:02:31,369 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=69.2 pTM=0.323 ipTM=0.127 tol=2.96
2024-12-08 19:02:42,205 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=68.9 pTM=0.319 ipTM=0.117 tol=2.23
2024-12-08 19:02:53,046 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=68.8 pTM=0.318 ipTM=0.117 tol=2.12
2024-12-08 19:03:03,887 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=68.9 pTM=0.322 ipTM=0.128 tol=3.87
2024-12-08 19:03:14,728 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=68.9 pTM=0.323 ipTM=0.13 tol=2.56
2024-12-08 19:03:25,569 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=68.7 pTM=0.32 ipTM=0.121 tol=3.75
2024-12-08 19:03:36,416 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=68.8 pTM=0.322 ipTM=0.124 tol=3.69
2024-12-08 19:03:47,262 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=69.1 pTM=0.321 ipTM=0.121 tol=3.01
2024-12-08 19:03:58,103 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=69.2 pTM=0.318 ipTM=0.111 tol=4.27
2024-12-08 19:04:08,946 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=68.7 pTM=0.315 ipTM=0.108 tol=2.09
2024-12-08 19:04:19,798 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=68.8 pTM=0.316 ipTM=0.112 tol=3.94
2024-12-08 19:04:30,649 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=68.6 pTM=0.316 ipTM=0.108 tol=3.07
2024-12-08 19:04:41,503 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=68.8 pTM=0.313 ipTM=0.104 tol=5.61
2024-12-08 19:04:41,503 alphafold2_multimer_v3_model_5_seed_000 took 336.2s (30 recycles)
2024-12-08 19:04:41,848 reranking models by 'multimer' metric
2024-12-08 19:04:46,483 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 19:05:07,925 Relaxation took 26.1s
2024-12-08 19:05:07,926 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=72.1 pTM=0.319 ipTM=0.13
2024-12-08 19:05:49,842 Relaxation took 41.9s
2024-12-08 19:05:49,842 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=71.2 pTM=0.318 ipTM=0.127
2024-12-08 19:06:34,525 Relaxation took 44.7s
2024-12-08 19:06:34,525 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=70.7 pTM=0.317 ipTM=0.121
2024-12-08 19:07:03,495 Relaxation took 29.0s
2024-12-08 19:07:03,495 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=70.5 pTM=0.318 ipTM=0.116
2024-12-08 19:07:55,735 Relaxation took 52.2s
2024-12-08 19:07:55,735 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=68.8 pTM=0.313 ipTM=0.104
2024-12-08 19:07:57,025 Done