2024-12-08 18:36:25,751 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 18:36:26,064 Running on GPU
2024-12-08 18:36:29,809 Found 6 citations for tools or databases
2024-12-08 18:36:29,810 Query 1/1: TRAF2_CD27 (length 761)
2024-12-08 18:36:30,092 Sleeping for 8s. Reason: PENDING
2024-12-08 18:36:38,355 Sleeping for 10s. Reason: RUNNING
2024-12-08 18:36:48,628 Sleeping for 6s. Reason: RUNNING
2024-12-08 18:36:54,887 Sleeping for 8s. Reason: RUNNING
2024-12-08 18:37:03,145 Sleeping for 7s. Reason: RUNNING
2024-12-08 18:37:10,408 Sleeping for 10s. Reason: RUNNING
2024-12-08 18:37:20,671 Sleeping for 7s. Reason: RUNNING
2024-12-08 18:37:27,924 Sleeping for 5s. Reason: RUNNING
2024-12-08 18:37:33,174 Sleeping for 10s. Reason: RUNNING
2024-12-08 18:37:43,431 Sleeping for 5s. Reason: RUNNING
2024-12-08 18:37:48,689 Sleeping for 6s. Reason: RUNNING
2024-12-08 18:37:54,941 Sleeping for 10s. Reason: RUNNING
2024-12-08 18:38:05,203 Sleeping for 5s. Reason: RUNNING
2024-12-08 18:38:10,460 Sleeping for 5s. Reason: RUNNING
2024-12-08 18:38:15,714 Sleeping for 6s. Reason: RUNNING
2024-12-08 18:38:21,980 Sleeping for 5s. Reason: RUNNING
2024-12-08 18:38:27,235 Sleeping for 8s. Reason: RUNNING
2024-12-08 18:38:36,431 Sleeping for 5s. Reason: PENDING
2024-12-08 18:38:41,681 Sleeping for 10s. Reason: RUNNING
2024-12-08 18:38:51,937 Sleeping for 7s. Reason: RUNNING
2024-12-08 18:38:59,193 Sleeping for 5s. Reason: RUNNING
2024-12-08 18:39:04,450 Sleeping for 9s. Reason: RUNNING
2024-12-08 18:39:13,707 Sleeping for 9s. Reason: RUNNING
2024-12-08 18:39:22,963 Sleeping for 9s. Reason: RUNNING
2024-12-08 18:39:32,227 Sleeping for 10s. Reason: RUNNING
2024-12-08 18:39:42,487 Sleeping for 10s. Reason: RUNNING
2024-12-08 18:39:55,326 Setting max_seq=508, max_extra_seq=2048
2024-12-08 18:42:50,147 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=68.9 pTM=0.301 ipTM=0.114
2024-12-08 18:43:01,606 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=68.8 pTM=0.319 ipTM=0.278 tol=13
2024-12-08 18:43:13,075 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=69.1 pTM=0.329 ipTM=0.351 tol=9.85
2024-12-08 18:43:24,557 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=68.7 pTM=0.321 ipTM=0.338 tol=6.21
2024-12-08 18:43:36,066 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=68.4 pTM=0.32 ipTM=0.339 tol=7.36
2024-12-08 18:43:47,577 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=68.9 pTM=0.322 ipTM=0.344 tol=3.67
2024-12-08 18:43:59,102 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=68.8 pTM=0.321 ipTM=0.343 tol=5.18
2024-12-08 18:44:10,634 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=69.2 pTM=0.324 ipTM=0.34 tol=6.55
2024-12-08 18:44:22,169 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=70.9 pTM=0.375 ipTM=0.393 tol=2.83
2024-12-08 18:44:33,714 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=71.2 pTM=0.383 ipTM=0.41 tol=3.75
2024-12-08 18:44:45,256 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=71.6 pTM=0.39 ipTM=0.418 tol=4.57
2024-12-08 18:44:56,800 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=72.1 pTM=0.393 ipTM=0.429 tol=3.08
2024-12-08 18:45:08,342 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=72.4 pTM=0.396 ipTM=0.431 tol=2.35
2024-12-08 18:45:19,896 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=72.8 pTM=0.401 ipTM=0.437 tol=2.28
2024-12-08 18:45:31,443 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=72.8 pTM=0.402 ipTM=0.437 tol=1.71
2024-12-08 18:45:43,000 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=72.9 pTM=0.402 ipTM=0.439 tol=1.28
2024-12-08 18:45:54,561 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=73 pTM=0.402 ipTM=0.435 tol=1.13
2024-12-08 18:46:06,128 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=73.1 pTM=0.402 ipTM=0.436 tol=0.993
2024-12-08 18:46:17,689 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=72.9 pTM=0.402 ipTM=0.435 tol=0.921
2024-12-08 18:46:29,257 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=72.8 pTM=0.407 ipTM=0.441 tol=1.19
2024-12-08 18:46:40,825 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=72.9 pTM=0.407 ipTM=0.439 tol=1.01
2024-12-08 18:46:52,410 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=72.9 pTM=0.407 ipTM=0.44 tol=0.709
2024-12-08 18:47:03,989 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=73.1 pTM=0.408 ipTM=0.44 tol=0.903
2024-12-08 18:47:15,571 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=73.1 pTM=0.41 ipTM=0.441 tol=0.785
2024-12-08 18:47:27,148 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=72.8 pTM=0.407 ipTM=0.438 tol=0.805
2024-12-08 18:47:38,732 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=72.9 pTM=0.405 ipTM=0.439 tol=1.25
2024-12-08 18:47:50,315 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=72.9 pTM=0.404 ipTM=0.436 tol=1.42
2024-12-08 18:48:01,902 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=72.9 pTM=0.406 ipTM=0.438 tol=0.877
2024-12-08 18:48:13,479 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=72.9 pTM=0.408 ipTM=0.437 tol=1.15
2024-12-08 18:48:25,060 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=72.8 pTM=0.407 ipTM=0.439 tol=1.59
2024-12-08 18:48:36,647 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=72.6 pTM=0.406 ipTM=0.437 tol=0.691
2024-12-08 18:48:36,648 alphafold2_multimer_v3_model_1_seed_000 took 516.1s (30 recycles)
2024-12-08 18:48:48,665 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=65.2 pTM=0.305 ipTM=0.153
2024-12-08 18:49:00,298 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=66.2 pTM=0.315 ipTM=0.213 tol=11
2024-12-08 18:49:11,937 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.4 pTM=0.312 ipTM=0.166 tol=6.01
2024-12-08 18:49:23,567 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=67.6 pTM=0.316 ipTM=0.243 tol=2.83
2024-12-08 18:49:35,200 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67.9 pTM=0.313 ipTM=0.209 tol=2.25
2024-12-08 18:49:46,833 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=68.2 pTM=0.312 ipTM=0.157 tol=1.24
2024-12-08 18:49:58,459 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=68.1 pTM=0.314 ipTM=0.195 tol=1.18
2024-12-08 18:50:10,086 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=68.2 pTM=0.312 ipTM=0.191 tol=1.04
2024-12-08 18:50:21,721 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=68.2 pTM=0.312 ipTM=0.189 tol=1.4
2024-12-08 18:50:33,352 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=68.4 pTM=0.313 ipTM=0.19 tol=1.2
2024-12-08 18:50:44,983 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=68.1 pTM=0.313 ipTM=0.15 tol=1.26
2024-12-08 18:50:56,613 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=68 pTM=0.315 ipTM=0.184 tol=2.72
2024-12-08 18:51:08,244 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=68.4 pTM=0.313 ipTM=0.174 tol=1.33
2024-12-08 18:51:19,867 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=68.5 pTM=0.315 ipTM=0.19 tol=1.22
2024-12-08 18:51:31,492 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=67.9 pTM=0.313 ipTM=0.145 tol=1.1
2024-12-08 18:51:43,110 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=68.1 pTM=0.317 ipTM=0.184 tol=1.26
2024-12-08 18:51:54,731 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=68.2 pTM=0.317 ipTM=0.174 tol=1.8
2024-12-08 18:52:06,355 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=67.9 pTM=0.317 ipTM=0.147 tol=1.32
2024-12-08 18:52:17,988 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=68.7 pTM=0.316 ipTM=0.214 tol=2.45
2024-12-08 18:52:29,612 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=68.2 pTM=0.315 ipTM=0.202 tol=1.43
2024-12-08 18:52:41,234 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=68.1 pTM=0.314 ipTM=0.156 tol=1.2
2024-12-08 18:52:52,853 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=68.2 pTM=0.318 ipTM=0.23 tol=1.03
2024-12-08 18:53:04,474 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=68.2 pTM=0.317 ipTM=0.188 tol=0.874
2024-12-08 18:53:16,098 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=68.4 pTM=0.318 ipTM=0.155 tol=0.99
2024-12-08 18:53:27,722 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=68.4 pTM=0.32 ipTM=0.235 tol=1.45
2024-12-08 18:53:39,339 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=68.7 pTM=0.317 ipTM=0.204 tol=1.6
2024-12-08 18:53:50,949 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=68.3 pTM=0.315 ipTM=0.158 tol=1.4
2024-12-08 18:54:02,562 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=68.6 pTM=0.318 ipTM=0.227 tol=1.5
2024-12-08 18:54:14,179 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=68.3 pTM=0.316 ipTM=0.203 tol=1.63
2024-12-08 18:54:25,797 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=68.5 pTM=0.318 ipTM=0.16 tol=1.76
2024-12-08 18:54:37,424 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=68.4 pTM=0.32 ipTM=0.235 tol=1.02
2024-12-08 18:54:37,424 alphafold2_multimer_v3_model_2_seed_000 took 360.4s (30 recycles)
2024-12-08 18:54:49,439 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=66 pTM=0.317 ipTM=0.153
2024-12-08 18:55:01,072 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=65.8 pTM=0.322 ipTM=0.151 tol=9.09
2024-12-08 18:55:12,705 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=66.2 pTM=0.319 ipTM=0.142 tol=6.59
2024-12-08 18:55:24,334 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=66.1 pTM=0.323 ipTM=0.146 tol=3.87
2024-12-08 18:55:35,973 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=66.4 pTM=0.321 ipTM=0.142 tol=3.37
2024-12-08 18:55:47,610 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=66.3 pTM=0.324 ipTM=0.145 tol=2.82
2024-12-08 18:55:59,235 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=66.3 pTM=0.328 ipTM=0.284 tol=8.77
2024-12-08 18:56:10,864 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=66.7 pTM=0.335 ipTM=0.322 tol=6.8
2024-12-08 18:56:22,506 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=66.6 pTM=0.335 ipTM=0.322 tol=6
2024-12-08 18:56:34,145 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=66.9 pTM=0.337 ipTM=0.332 tol=3.64
2024-12-08 18:56:45,783 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=66.8 pTM=0.335 ipTM=0.334 tol=1.46
2024-12-08 18:56:57,423 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=66.8 pTM=0.336 ipTM=0.335 tol=2.52
2024-12-08 18:57:09,063 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=66.9 pTM=0.335 ipTM=0.334 tol=2.25
2024-12-08 18:57:20,705 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=67.1 pTM=0.335 ipTM=0.339 tol=1.22
2024-12-08 18:57:32,346 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=66.9 pTM=0.337 ipTM=0.338 tol=1.33
2024-12-08 18:57:43,989 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=67 pTM=0.336 ipTM=0.333 tol=1.33
2024-12-08 18:57:55,630 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=67.2 pTM=0.338 ipTM=0.337 tol=2.24
2024-12-08 18:58:07,279 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=67.5 pTM=0.336 ipTM=0.34 tol=2.81
2024-12-08 18:58:18,923 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=67 pTM=0.333 ipTM=0.331 tol=1.27
2024-12-08 18:58:30,566 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=67.1 pTM=0.335 ipTM=0.339 tol=1.68
2024-12-08 18:58:42,209 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=67.3 pTM=0.335 ipTM=0.338 tol=2.01
2024-12-08 18:58:53,854 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.2 pTM=0.338 ipTM=0.34 tol=2.14
2024-12-08 18:59:05,500 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=67.8 pTM=0.336 ipTM=0.344 tol=2.42
2024-12-08 18:59:17,145 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.7 pTM=0.336 ipTM=0.34 tol=1.15
2024-12-08 18:59:28,783 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=67.4 pTM=0.336 ipTM=0.34 tol=1.71
2024-12-08 18:59:40,422 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67.4 pTM=0.336 ipTM=0.339 tol=1.75
2024-12-08 18:59:52,057 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=67.4 pTM=0.338 ipTM=0.342 tol=2.17
2024-12-08 19:00:03,700 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.1 pTM=0.334 ipTM=0.331 tol=1.9
2024-12-08 19:00:15,332 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=67.1 pTM=0.334 ipTM=0.331 tol=1.87
2024-12-08 19:00:26,965 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=66.7 pTM=0.335 ipTM=0.327 tol=1.93
2024-12-08 19:00:38,601 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.2 pTM=0.336 ipTM=0.34 tol=1.66
2024-12-08 19:00:38,602 alphafold2_multimer_v3_model_3_seed_000 took 360.8s (30 recycles)
2024-12-08 19:00:50,639 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=65.4 pTM=0.337 ipTM=0.234
2024-12-08 19:01:02,283 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=65 pTM=0.314 ipTM=0.212 tol=14.9
2024-12-08 19:01:13,936 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65.8 pTM=0.317 ipTM=0.337 tol=20.3
2024-12-08 19:01:25,582 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=67.4 pTM=0.327 ipTM=0.359 tol=11.3
2024-12-08 19:01:37,224 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=66.5 pTM=0.321 ipTM=0.339 tol=6.75
2024-12-08 19:01:48,855 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=66.8 pTM=0.327 ipTM=0.35 tol=5.5
2024-12-08 19:02:00,490 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=67 pTM=0.326 ipTM=0.345 tol=5.46
2024-12-08 19:02:12,137 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=67.4 pTM=0.327 ipTM=0.35 tol=5.58
2024-12-08 19:02:23,772 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=67.4 pTM=0.325 ipTM=0.342 tol=4.66
2024-12-08 19:02:35,409 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=67.8 pTM=0.328 ipTM=0.352 tol=3.38
2024-12-08 19:02:47,045 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=67.5 pTM=0.325 ipTM=0.343 tol=3.19
2024-12-08 19:02:58,685 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=67.6 pTM=0.327 ipTM=0.347 tol=2.64
2024-12-08 19:03:10,317 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=67.5 pTM=0.323 ipTM=0.338 tol=2.28
2024-12-08 19:03:21,951 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=68.1 pTM=0.328 ipTM=0.349 tol=2.63
2024-12-08 19:03:33,589 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=67.6 pTM=0.323 ipTM=0.334 tol=2.59
2024-12-08 19:03:45,224 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=67.5 pTM=0.325 ipTM=0.34 tol=3.09
2024-12-08 19:03:56,869 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=67.7 pTM=0.323 ipTM=0.334 tol=3.04
2024-12-08 19:04:08,505 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=67.7 pTM=0.324 ipTM=0.337 tol=2.37
2024-12-08 19:04:20,143 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=67.4 pTM=0.321 ipTM=0.325 tol=2.72
2024-12-08 19:04:31,782 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=67.6 pTM=0.324 ipTM=0.334 tol=2.09
2024-12-08 19:04:43,430 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=67.1 pTM=0.32 ipTM=0.322 tol=4.07
2024-12-08 19:04:55,073 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=67.6 pTM=0.324 ipTM=0.333 tol=3
2024-12-08 19:05:06,720 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=67.2 pTM=0.321 ipTM=0.322 tol=2.29
2024-12-08 19:05:18,359 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=68 pTM=0.326 ipTM=0.34 tol=2.94
2024-12-08 19:05:29,990 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=67.5 pTM=0.323 ipTM=0.331 tol=3.01
2024-12-08 19:05:41,635 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=67.6 pTM=0.324 ipTM=0.335 tol=2.44
2024-12-08 19:05:53,277 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=67.4 pTM=0.322 ipTM=0.323 tol=2.54
2024-12-08 19:06:04,916 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=67.3 pTM=0.323 ipTM=0.33 tol=2.14
2024-12-08 19:06:16,564 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=66.8 pTM=0.318 ipTM=0.314 tol=3.17
2024-12-08 19:06:28,207 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=66.9 pTM=0.32 ipTM=0.319 tol=3.5
2024-12-08 19:06:39,848 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=67.1 pTM=0.32 ipTM=0.315 tol=2.6
2024-12-08 19:06:39,848 alphafold2_multimer_v3_model_4_seed_000 took 360.9s (30 recycles)
2024-12-08 19:06:51,887 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=62.7 pTM=0.304 ipTM=0.211
2024-12-08 19:07:03,536 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=61.6 pTM=0.301 ipTM=0.157 tol=9.23
2024-12-08 19:07:15,177 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=63.2 pTM=0.312 ipTM=0.327 tol=12.6
2024-12-08 19:07:26,798 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=63.9 pTM=0.322 ipTM=0.352 tol=6.36
2024-12-08 19:07:38,422 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=63.7 pTM=0.317 ipTM=0.336 tol=6.13
2024-12-08 19:07:50,051 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=64.6 pTM=0.316 ipTM=0.338 tol=3.69
2024-12-08 19:08:01,665 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=64.6 pTM=0.321 ipTM=0.344 tol=4.23
2024-12-08 19:08:13,265 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=64.8 pTM=0.319 ipTM=0.339 tol=2.89
2024-12-08 19:08:24,877 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=64.4 pTM=0.318 ipTM=0.336 tol=3.05
2024-12-08 19:08:36,483 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=65.1 pTM=0.32 ipTM=0.339 tol=1.95
2024-12-08 19:08:48,086 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=64.3 pTM=0.319 ipTM=0.336 tol=3.04
2024-12-08 19:08:59,697 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=64.8 pTM=0.319 ipTM=0.336 tol=2.23
2024-12-08 19:09:11,311 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=65.1 pTM=0.32 ipTM=0.34 tol=2.97
2024-12-08 19:09:22,920 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=65.3 pTM=0.32 ipTM=0.341 tol=1.43
2024-12-08 19:09:34,529 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=65.1 pTM=0.321 ipTM=0.336 tol=3.72
2024-12-08 19:09:46,131 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=65.4 pTM=0.32 ipTM=0.338 tol=3.9
2024-12-08 19:09:57,730 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=65.2 pTM=0.321 ipTM=0.338 tol=1.93
2024-12-08 19:10:09,334 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=65.4 pTM=0.32 ipTM=0.335 tol=3.67
2024-12-08 19:10:20,939 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=65.5 pTM=0.321 ipTM=0.339 tol=4.72
2024-12-08 19:10:32,527 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=65.2 pTM=0.319 ipTM=0.337 tol=2.7
2024-12-08 19:10:44,132 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=64.9 pTM=0.319 ipTM=0.336 tol=2.36
2024-12-08 19:10:55,735 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=65.4 pTM=0.322 ipTM=0.342 tol=4.75
2024-12-08 19:11:07,338 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=65.1 pTM=0.32 ipTM=0.335 tol=4.29
2024-12-08 19:11:18,939 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=65.4 pTM=0.32 ipTM=0.34 tol=2.21
2024-12-08 19:11:30,543 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=65.5 pTM=0.323 ipTM=0.348 tol=4.95
2024-12-08 19:11:42,146 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=65.1 pTM=0.32 ipTM=0.34 tol=4.66
2024-12-08 19:11:53,751 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=65.3 pTM=0.319 ipTM=0.338 tol=3.97
2024-12-08 19:12:05,356 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=65.2 pTM=0.32 ipTM=0.338 tol=3.48
2024-12-08 19:12:16,957 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=65.1 pTM=0.32 ipTM=0.333 tol=2.22
2024-12-08 19:12:28,566 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=65.2 pTM=0.319 ipTM=0.332 tol=3.78
2024-12-08 19:12:40,169 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=65 pTM=0.321 ipTM=0.335 tol=3.82
2024-12-08 19:12:40,170 alphafold2_multimer_v3_model_5_seed_000 took 359.9s (30 recycles)
2024-12-08 19:12:40,543 reranking models by 'multimer' metric
2024-12-08 19:12:42,069 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 19:13:10,950 Relaxation took 30.4s
2024-12-08 19:13:10,950 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=72.6 pTM=0.406 ipTM=0.437
2024-12-08 19:14:12,741 Relaxation took 61.8s
2024-12-08 19:14:12,741 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.2 pTM=0.336 ipTM=0.34
2024-12-08 19:14:49,936 Relaxation took 37.2s
2024-12-08 19:14:49,936 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=65 pTM=0.321 ipTM=0.335
2024-12-08 19:15:39,113 Relaxation took 49.2s
2024-12-08 19:15:39,114 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=67.1 pTM=0.32 ipTM=0.315
2024-12-08 19:16:27,788 Relaxation took 48.7s
2024-12-08 19:16:27,788 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=68.4 pTM=0.32 ipTM=0.235
2024-12-08 19:16:29,262 Done