2024-12-08 18:43:47,398 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 18:43:47,691 Running on GPU
2024-12-08 18:43:51,383 Found 6 citations for tools or databases
2024-12-08 18:43:51,383 Query 1/1: TRAF3_SHPK (length 1046)
2024-12-08 18:43:51,667 Sleeping for 9s. Reason: PENDING
2024-12-08 18:44:00,929 Sleeping for 7s. Reason: RUNNING
2024-12-08 18:44:08,182 Sleeping for 5s. Reason: RUNNING
2024-12-08 18:44:13,436 Sleeping for 6s. Reason: RUNNING
2024-12-08 18:44:19,698 Sleeping for 5s. Reason: RUNNING
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2024-12-08 18:44:33,214 Sleeping for 10s. Reason: RUNNING
2024-12-08 18:44:43,480 Sleeping for 7s. Reason: RUNNING
2024-12-08 18:44:50,741 Sleeping for 6s. Reason: RUNNING
2024-12-08 18:44:57,008 Sleeping for 7s. Reason: RUNNING
2024-12-08 18:45:04,278 Sleeping for 7s. Reason: RUNNING
2024-12-08 18:45:11,537 Sleeping for 7s. Reason: RUNNING
2024-12-08 18:45:18,800 Sleeping for 5s. Reason: RUNNING
2024-12-08 18:45:24,057 Sleeping for 7s. Reason: RUNNING
2024-12-08 18:45:31,319 Sleeping for 7s. Reason: RUNNING
2024-12-08 18:45:38,571 Sleeping for 10s. Reason: RUNNING
2024-12-08 18:45:48,839 Sleeping for 6s. Reason: RUNNING
2024-12-08 18:45:55,095 Sleeping for 10s. Reason: RUNNING
2024-12-08 18:46:05,358 Sleeping for 5s. Reason: RUNNING
2024-12-08 18:46:10,612 Sleeping for 6s. Reason: RUNNING
2024-12-08 18:46:16,869 Sleeping for 9s. Reason: RUNNING
2024-12-08 18:46:26,145 Sleeping for 6s. Reason: RUNNING
2024-12-08 18:46:32,406 Sleeping for 8s. Reason: RUNNING
2024-12-08 18:46:40,689 Sleeping for 5s. Reason: RUNNING
2024-12-08 18:46:45,947 Sleeping for 8s. Reason: RUNNING
2024-12-08 18:46:54,225 Sleeping for 7s. Reason: RUNNING
2024-12-08 18:47:01,491 Sleeping for 8s. Reason: RUNNING
2024-12-08 18:47:11,340 Sleeping for 6s. Reason: PENDING
2024-12-08 18:47:17,596 Sleeping for 5s. Reason: RUNNING
2024-12-08 18:47:22,849 Sleeping for 5s. Reason: RUNNING
2024-12-08 18:47:28,104 Sleeping for 6s. Reason: RUNNING
2024-12-08 18:47:34,363 Sleeping for 6s. Reason: RUNNING
2024-12-08 18:47:40,619 Sleeping for 8s. Reason: RUNNING
2024-12-08 18:47:48,878 Sleeping for 7s. Reason: RUNNING
2024-12-08 18:47:56,145 Sleeping for 8s. Reason: RUNNING
2024-12-08 18:48:04,395 Sleeping for 10s. Reason: RUNNING
2024-12-08 18:48:14,654 Sleeping for 6s. Reason: RUNNING
2024-12-08 18:48:20,907 Sleeping for 8s. Reason: RUNNING
2024-12-08 18:48:29,165 Sleeping for 5s. Reason: RUNNING
2024-12-08 18:48:34,419 Sleeping for 8s. Reason: RUNNING
2024-12-08 18:48:42,671 Sleeping for 7s. Reason: RUNNING
2024-12-08 18:48:49,927 Sleeping for 6s. Reason: RUNNING
2024-12-08 18:48:59,012 Setting max_seq=508, max_extra_seq=2048
2024-12-08 18:51:49,867 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=79.4 pTM=0.485 ipTM=0.145
2024-12-08 18:52:14,779 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=79.4 pTM=0.492 ipTM=0.15 tol=8.01
2024-12-08 18:52:39,678 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=79.9 pTM=0.492 ipTM=0.151 tol=5.01
2024-12-08 18:53:04,588 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=79.9 pTM=0.497 ipTM=0.189 tol=7.64
2024-12-08 18:53:29,538 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=79.6 pTM=0.495 ipTM=0.187 tol=2.63
2024-12-08 18:53:54,522 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=79.6 pTM=0.494 ipTM=0.157 tol=1.98
2024-12-08 18:54:19,524 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=79.6 pTM=0.493 ipTM=0.151 tol=1.97
2024-12-08 18:54:44,534 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=79.4 pTM=0.491 ipTM=0.151 tol=1.77
2024-12-08 18:55:09,608 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=79.9 pTM=0.491 ipTM=0.152 tol=2.23
2024-12-08 18:55:34,740 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=79.9 pTM=0.492 ipTM=0.166 tol=5.39
2024-12-08 18:55:59,840 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=79.9 pTM=0.494 ipTM=0.158 tol=3.04
2024-12-08 18:56:24,974 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=79.5 pTM=0.492 ipTM=0.15 tol=6.41
2024-12-08 18:56:50,081 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=79.3 pTM=0.49 ipTM=0.152 tol=3.35
2024-12-08 18:57:15,169 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=79.5 pTM=0.493 ipTM=0.156 tol=4.16
2024-12-08 18:57:40,291 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=79.6 pTM=0.493 ipTM=0.15 tol=3.26
2024-12-08 18:58:05,425 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=79.9 pTM=0.493 ipTM=0.149 tol=1.82
2024-12-08 18:58:30,541 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=79.6 pTM=0.494 ipTM=0.148 tol=3.25
2024-12-08 18:58:55,677 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=79.6 pTM=0.493 ipTM=0.151 tol=2.06
2024-12-08 18:59:20,779 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=79.7 pTM=0.493 ipTM=0.148 tol=1.63
2024-12-08 18:59:45,865 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=79.6 pTM=0.491 ipTM=0.151 tol=1.7
2024-12-08 19:00:10,975 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=79.8 pTM=0.493 ipTM=0.146 tol=1.85
2024-12-08 19:00:36,069 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=80 pTM=0.493 ipTM=0.151 tol=1.87
2024-12-08 19:01:01,187 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=79.9 pTM=0.493 ipTM=0.147 tol=1.37
2024-12-08 19:01:26,283 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=79.8 pTM=0.492 ipTM=0.147 tol=1.57
2024-12-08 19:01:51,396 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=79.8 pTM=0.494 ipTM=0.147 tol=1.34
2024-12-08 19:02:16,503 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=79.8 pTM=0.493 ipTM=0.148 tol=1.15
2024-12-08 19:02:41,590 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=80.1 pTM=0.493 ipTM=0.148 tol=1.47
2024-12-08 19:03:06,678 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=80 pTM=0.494 ipTM=0.157 tol=0.868
2024-12-08 19:03:31,805 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=79.8 pTM=0.493 ipTM=0.147 tol=1.4
2024-12-08 19:03:56,903 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=79.8 pTM=0.492 ipTM=0.149 tol=1.75
2024-12-08 19:04:22,021 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=79.8 pTM=0.492 ipTM=0.143 tol=3.79
2024-12-08 19:04:22,022 alphafold2_multimer_v3_model_1_seed_000 took 917.8s (30 recycles)
2024-12-08 19:04:47,919 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=79.2 pTM=0.48 ipTM=0.141
2024-12-08 19:05:13,147 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=80 pTM=0.49 ipTM=0.134 tol=15
2024-12-08 19:05:38,344 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=80.8 pTM=0.49 ipTM=0.135 tol=6.7
2024-12-08 19:06:03,551 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=80.9 pTM=0.491 ipTM=0.136 tol=3.59
2024-12-08 19:06:28,732 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=80.9 pTM=0.491 ipTM=0.138 tol=2.2
2024-12-08 19:06:53,915 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=80.9 pTM=0.491 ipTM=0.14 tol=1.89
2024-12-08 19:07:19,110 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=80.9 pTM=0.489 ipTM=0.138 tol=1.35
2024-12-08 19:07:44,233 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=80.9 pTM=0.488 ipTM=0.137 tol=1.16
2024-12-08 19:08:09,392 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=81.1 pTM=0.489 ipTM=0.138 tol=1.45
2024-12-08 19:08:34,572 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=80.8 pTM=0.486 ipTM=0.138 tol=1.33
2024-12-08 19:08:59,755 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=80.8 pTM=0.488 ipTM=0.136 tol=1.53
2024-12-08 19:09:24,948 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=80.8 pTM=0.486 ipTM=0.137 tol=0.914
2024-12-08 19:09:50,159 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=80.8 pTM=0.486 ipTM=0.136 tol=1.1
2024-12-08 19:10:15,360 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=80.9 pTM=0.488 ipTM=0.137 tol=1.15
2024-12-08 19:10:40,557 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=80.9 pTM=0.488 ipTM=0.136 tol=1.59
2024-12-08 19:11:05,741 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=80.7 pTM=0.487 ipTM=0.135 tol=0.875
2024-12-08 19:11:30,918 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=80.8 pTM=0.488 ipTM=0.136 tol=1.74
2024-12-08 19:11:56,113 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=81 pTM=0.488 ipTM=0.137 tol=2.12
2024-12-08 19:12:21,243 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=80.7 pTM=0.487 ipTM=0.136 tol=2.6
2024-12-08 19:12:46,400 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=80.6 pTM=0.486 ipTM=0.135 tol=2.74
2024-12-08 19:13:11,573 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=80.9 pTM=0.488 ipTM=0.136 tol=1.47
2024-12-08 19:13:36,723 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=81.1 pTM=0.487 ipTM=0.135 tol=1.64
2024-12-08 19:14:01,911 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=80.9 pTM=0.488 ipTM=0.137 tol=0.955
2024-12-08 19:14:27,111 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=80.9 pTM=0.487 ipTM=0.135 tol=1.62
2024-12-08 19:14:52,277 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=80.9 pTM=0.489 ipTM=0.15 tol=4.25
2024-12-08 19:15:17,456 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=81.1 pTM=0.488 ipTM=0.136 tol=5.21
2024-12-08 19:15:42,645 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=81.2 pTM=0.488 ipTM=0.136 tol=1.1
2024-12-08 19:16:07,808 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=81.1 pTM=0.489 ipTM=0.135 tol=1.87
2024-12-08 19:16:32,955 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=81 pTM=0.487 ipTM=0.135 tol=2.14
2024-12-08 19:16:58,118 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=81.1 pTM=0.487 ipTM=0.135 tol=1.58
2024-12-08 19:17:23,268 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=81.1 pTM=0.49 ipTM=0.136 tol=2.93
2024-12-08 19:17:23,269 alphafold2_multimer_v3_model_2_seed_000 took 780.6s (30 recycles)
2024-12-08 19:17:49,160 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=79 pTM=0.487 ipTM=0.126
2024-12-08 19:18:14,347 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=78.8 pTM=0.488 ipTM=0.129 tol=12.5
2024-12-08 19:18:39,510 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=78.8 pTM=0.489 ipTM=0.13 tol=5.97
2024-12-08 19:19:04,668 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=78.8 pTM=0.49 ipTM=0.157 tol=6.08
2024-12-08 19:19:29,833 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=78.7 pTM=0.49 ipTM=0.171 tol=3.53
2024-12-08 19:19:54,950 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=78.5 pTM=0.488 ipTM=0.168 tol=2.16
2024-12-08 19:20:20,099 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=79.1 pTM=0.489 ipTM=0.165 tol=2.46
2024-12-08 19:20:45,233 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=79.2 pTM=0.49 ipTM=0.169 tol=2.12
2024-12-08 19:21:10,362 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=79.1 pTM=0.489 ipTM=0.161 tol=1.25
2024-12-08 19:21:35,490 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=78.9 pTM=0.488 ipTM=0.158 tol=1.78
2024-12-08 19:22:00,607 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=79.2 pTM=0.49 ipTM=0.169 tol=1.25
2024-12-08 19:22:25,753 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=79.2 pTM=0.49 ipTM=0.161 tol=1.25
2024-12-08 19:22:50,887 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=78.9 pTM=0.488 ipTM=0.158 tol=1.49
2024-12-08 19:23:16,002 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=79.2 pTM=0.489 ipTM=0.163 tol=1.43
2024-12-08 19:23:41,154 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=79.2 pTM=0.49 ipTM=0.151 tol=1.5
2024-12-08 19:24:06,334 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=79.2 pTM=0.489 ipTM=0.148 tol=0.959
2024-12-08 19:24:31,484 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=79.1 pTM=0.489 ipTM=0.141 tol=1.26
2024-12-08 19:24:56,627 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=79.3 pTM=0.49 ipTM=0.166 tol=2.2
2024-12-08 19:25:21,794 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=79.1 pTM=0.49 ipTM=0.152 tol=1.48
2024-12-08 19:25:46,919 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=78.8 pTM=0.488 ipTM=0.157 tol=1.88
2024-12-08 19:26:12,069 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=79.1 pTM=0.488 ipTM=0.142 tol=1.59
2024-12-08 19:26:37,228 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=79.3 pTM=0.488 ipTM=0.145 tol=1.31
2024-12-08 19:27:02,384 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=79.1 pTM=0.49 ipTM=0.157 tol=1.47
2024-12-08 19:27:27,508 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=79.1 pTM=0.49 ipTM=0.173 tol=1.39
2024-12-08 19:27:52,650 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=78.9 pTM=0.49 ipTM=0.173 tol=1.15
2024-12-08 19:28:17,790 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=79.4 pTM=0.492 ipTM=0.169 tol=1.2
2024-12-08 19:28:42,940 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=79.4 pTM=0.491 ipTM=0.173 tol=1.13
2024-12-08 19:29:08,070 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=79.1 pTM=0.491 ipTM=0.173 tol=1.56
2024-12-08 19:29:33,190 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=78.8 pTM=0.49 ipTM=0.185 tol=1.68
2024-12-08 19:29:58,318 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=78.9 pTM=0.492 ipTM=0.19 tol=1.34
2024-12-08 19:30:23,417 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=78.9 pTM=0.492 ipTM=0.189 tol=0.983
2024-12-08 19:30:23,418 alphafold2_multimer_v3_model_3_seed_000 took 779.5s (30 recycles)
2024-12-08 19:30:49,274 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=78.1 pTM=0.484 ipTM=0.142
2024-12-08 19:31:14,486 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=79.1 pTM=0.498 ipTM=0.137 tol=6.05
2024-12-08 19:31:39,683 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=79.4 pTM=0.498 ipTM=0.142 tol=4.81
2024-12-08 19:32:04,902 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=79.6 pTM=0.496 ipTM=0.141 tol=3.49
2024-12-08 19:32:30,111 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=79.5 pTM=0.497 ipTM=0.145 tol=3.62
2024-12-08 19:32:55,284 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=79.2 pTM=0.496 ipTM=0.148 tol=3.46
2024-12-08 19:33:20,477 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=79.1 pTM=0.498 ipTM=0.146 tol=2.99
2024-12-08 19:33:45,671 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=79.1 pTM=0.498 ipTM=0.146 tol=1.64
2024-12-08 19:34:10,831 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=79.1 pTM=0.498 ipTM=0.146 tol=3.14
2024-12-08 19:34:36,004 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=79.1 pTM=0.498 ipTM=0.143 tol=2.32
2024-12-08 19:35:01,185 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=79.1 pTM=0.498 ipTM=0.142 tol=1.73
2024-12-08 19:35:26,332 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=78.9 pTM=0.498 ipTM=0.142 tol=1.52
2024-12-08 19:35:51,485 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=78.7 pTM=0.499 ipTM=0.143 tol=1
2024-12-08 19:36:16,653 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=78.9 pTM=0.498 ipTM=0.142 tol=1.57
2024-12-08 19:36:41,817 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=78.9 pTM=0.498 ipTM=0.143 tol=2.42
2024-12-08 19:37:06,988 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=78.8 pTM=0.499 ipTM=0.141 tol=2.43
2024-12-08 19:37:32,153 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=78.8 pTM=0.499 ipTM=0.141 tol=1.45
2024-12-08 19:37:57,320 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=79 pTM=0.499 ipTM=0.143 tol=1.62
2024-12-08 19:38:22,451 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=78.9 pTM=0.497 ipTM=0.141 tol=1.43
2024-12-08 19:38:47,590 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=78.8 pTM=0.498 ipTM=0.143 tol=2.21
2024-12-08 19:39:12,768 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=79.2 pTM=0.498 ipTM=0.142 tol=1.86
2024-12-08 19:39:37,931 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=79.5 pTM=0.497 ipTM=0.144 tol=1.54
2024-12-08 19:40:03,054 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=79.3 pTM=0.496 ipTM=0.145 tol=1.15
2024-12-08 19:40:28,221 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=79.2 pTM=0.496 ipTM=0.142 tol=1.16
2024-12-08 19:40:53,376 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=79.2 pTM=0.497 ipTM=0.144 tol=1.04
2024-12-08 19:41:18,534 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=79.6 pTM=0.498 ipTM=0.143 tol=0.889
2024-12-08 19:41:43,712 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=79.6 pTM=0.497 ipTM=0.146 tol=1.71
2024-12-08 19:42:08,888 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=79.5 pTM=0.498 ipTM=0.144 tol=2.56
2024-12-08 19:42:34,025 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=79.4 pTM=0.497 ipTM=0.141 tol=2.17
2024-12-08 19:42:59,205 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=79.4 pTM=0.496 ipTM=0.143 tol=1.58
2024-12-08 19:43:24,401 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=79.4 pTM=0.498 ipTM=0.141 tol=1.41
2024-12-08 19:43:24,402 alphafold2_multimer_v3_model_4_seed_000 took 780.3s (30 recycles)
2024-12-08 19:43:50,238 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=78.4 pTM=0.481 ipTM=0.129
2024-12-08 19:44:15,479 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=79.1 pTM=0.491 ipTM=0.129 tol=10.3
2024-12-08 19:44:40,710 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=79.6 pTM=0.491 ipTM=0.129 tol=5.52
2024-12-08 19:45:05,907 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=79.8 pTM=0.491 ipTM=0.13 tol=2.58
2024-12-08 19:45:31,113 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=80 pTM=0.493 ipTM=0.131 tol=2.98
2024-12-08 19:45:56,306 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=79.6 pTM=0.491 ipTM=0.131 tol=2.59
2024-12-08 19:46:21,506 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=79.8 pTM=0.491 ipTM=0.131 tol=3.24
2024-12-08 19:46:46,704 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=79.6 pTM=0.49 ipTM=0.138 tol=7.02
2024-12-08 19:47:11,888 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=79.7 pTM=0.49 ipTM=0.138 tol=2.61
2024-12-08 19:47:37,090 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=79.8 pTM=0.49 ipTM=0.138 tol=5.07
2024-12-08 19:48:02,260 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=80.1 pTM=0.491 ipTM=0.137 tol=4.74
2024-12-08 19:48:27,432 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=79.9 pTM=0.493 ipTM=0.14 tol=3.79
2024-12-08 19:48:52,641 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=79.6 pTM=0.492 ipTM=0.142 tol=3.06
2024-12-08 19:49:17,850 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=80 pTM=0.494 ipTM=0.139 tol=1.38
2024-12-08 19:49:43,082 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=80 pTM=0.494 ipTM=0.137 tol=2.9
2024-12-08 19:50:08,298 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=79.8 pTM=0.493 ipTM=0.135 tol=2.41
2024-12-08 19:50:33,532 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=80 pTM=0.494 ipTM=0.134 tol=2.21
2024-12-08 19:50:58,723 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=80.1 pTM=0.494 ipTM=0.133 tol=0.679
2024-12-08 19:51:23,931 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=80 pTM=0.493 ipTM=0.131 tol=1.08
2024-12-08 19:51:49,144 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=79.6 pTM=0.492 ipTM=0.134 tol=1.01
2024-12-08 19:52:14,340 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=79.8 pTM=0.493 ipTM=0.133 tol=1.08
2024-12-08 19:52:39,557 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=80.1 pTM=0.492 ipTM=0.133 tol=1.26
2024-12-08 19:53:04,772 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=79.8 pTM=0.493 ipTM=0.133 tol=1.27
2024-12-08 19:53:29,944 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=79.7 pTM=0.492 ipTM=0.132 tol=1.01
2024-12-08 19:53:55,167 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=79.9 pTM=0.494 ipTM=0.131 tol=1.24
2024-12-08 19:54:20,373 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=80.2 pTM=0.494 ipTM=0.131 tol=1.61
2024-12-08 19:54:45,526 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=80.1 pTM=0.493 ipTM=0.132 tol=1.6
2024-12-08 19:55:10,711 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=79.8 pTM=0.493 ipTM=0.132 tol=1.95
2024-12-08 19:55:35,889 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=79.8 pTM=0.492 ipTM=0.131 tol=1.52
2024-12-08 19:56:01,074 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=79.8 pTM=0.492 ipTM=0.131 tol=1.6
2024-12-08 19:56:26,267 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=79.9 pTM=0.493 ipTM=0.131 tol=1.31
2024-12-08 19:56:26,268 alphafold2_multimer_v3_model_5_seed_000 took 781.2s (30 recycles)
2024-12-08 19:56:26,937 reranking models by 'multimer' metric
2024-12-08 19:56:30,488 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 19:57:09,899 Relaxation took 43.0s
2024-12-08 19:57:09,899 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=78.9 pTM=0.492 ipTM=0.189
2024-12-08 19:58:33,905 Relaxation took 84.0s
2024-12-08 19:58:33,905 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=79.8 pTM=0.492 ipTM=0.143
2024-12-08 19:59:55,644 Relaxation took 81.7s
2024-12-08 19:59:55,644 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=79.4 pTM=0.498 ipTM=0.141
2024-12-08 20:00:56,696 Relaxation took 61.1s
2024-12-08 20:00:56,696 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=81.1 pTM=0.49 ipTM=0.136
2024-12-08 20:01:31,849 Relaxation took 35.2s
2024-12-08 20:01:31,850 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=79.9 pTM=0.493 ipTM=0.131
2024-12-08 20:01:33,731 Done