2024-12-08 18:56:42,444 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 18:56:42,754 Running on GPU
2024-12-08 18:56:46,825 Found 6 citations for tools or databases
2024-12-08 18:56:46,825 Query 1/1: TRAF7_ATG4C (length 1128)
2024-12-08 18:56:48,629 Sleeping for 5s. Reason: PENDING
2024-12-08 18:56:53,889 Sleeping for 7s. Reason: PENDING
2024-12-08 18:57:01,144 Sleeping for 5s. Reason: RUNNING
2024-12-08 18:57:06,398 Sleeping for 5s. Reason: RUNNING
2024-12-08 18:57:11,650 Sleeping for 6s. Reason: RUNNING
2024-12-08 18:57:17,902 Sleeping for 9s. Reason: RUNNING
2024-12-08 18:57:27,161 Sleeping for 10s. Reason: RUNNING
2024-12-08 18:57:37,421 Sleeping for 7s. Reason: RUNNING
2024-12-08 18:57:44,674 Sleeping for 6s. Reason: RUNNING
2024-12-08 18:57:50,927 Sleeping for 6s. Reason: RUNNING
2024-12-08 18:57:57,188 Sleeping for 7s. Reason: RUNNING
2024-12-08 18:58:04,440 Sleeping for 9s. Reason: RUNNING
2024-12-08 18:58:13,693 Sleeping for 9s. Reason: RUNNING
2024-12-08 18:58:22,965 Sleeping for 6s. Reason: RUNNING
2024-12-08 18:58:29,221 Sleeping for 9s. Reason: RUNNING
2024-12-08 18:58:38,479 Sleeping for 6s. Reason: RUNNING
2024-12-08 18:58:47,911 Setting max_seq=508, max_extra_seq=2048
2024-12-08 19:01:06,587 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=67.9 pTM=0.447 ipTM=0.249
2024-12-08 19:01:32,838 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=67.3 pTM=0.447 ipTM=0.194 tol=9.48
2024-12-08 19:01:59,240 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=68.8 pTM=0.445 ipTM=0.205 tol=9.24
2024-12-08 19:02:25,715 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=69.1 pTM=0.447 ipTM=0.198 tol=4.16
2024-12-08 19:02:52,254 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=69.2 pTM=0.442 ipTM=0.218 tol=4.32
2024-12-08 19:03:18,795 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=69.5 pTM=0.442 ipTM=0.212 tol=4.21
2024-12-08 19:03:45,347 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=69.4 pTM=0.445 ipTM=0.223 tol=2.86
2024-12-08 19:04:11,935 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=69.7 pTM=0.444 ipTM=0.217 tol=3.7
2024-12-08 19:04:38,484 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=69.6 pTM=0.443 ipTM=0.229 tol=6.22
2024-12-08 19:05:05,045 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=69.6 pTM=0.445 ipTM=0.219 tol=7.67
2024-12-08 19:05:31,582 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=69.8 pTM=0.454 ipTM=0.237 tol=6.18
2024-12-08 19:05:58,154 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=69.8 pTM=0.445 ipTM=0.209 tol=4.84
2024-12-08 19:06:24,710 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=69.7 pTM=0.466 ipTM=0.277 tol=2.54
2024-12-08 19:06:51,280 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=70.2 pTM=0.465 ipTM=0.282 tol=4.06
2024-12-08 19:07:17,812 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=69.6 pTM=0.453 ipTM=0.241 tol=2.99
2024-12-08 19:07:44,371 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=69.8 pTM=0.452 ipTM=0.236 tol=5.84
2024-12-08 19:08:10,931 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=69.4 pTM=0.445 ipTM=0.213 tol=3.77
2024-12-08 19:08:37,474 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=69.6 pTM=0.447 ipTM=0.22 tol=2.04
2024-12-08 19:09:04,056 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=69.4 pTM=0.442 ipTM=0.201 tol=2.14
2024-12-08 19:09:30,603 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=69.6 pTM=0.455 ipTM=0.24 tol=3.39
2024-12-08 19:09:57,186 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=69.8 pTM=0.445 ipTM=0.208 tol=2.68
2024-12-08 19:10:23,731 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=69.8 pTM=0.471 ipTM=0.309 tol=4.07
2024-12-08 19:10:50,289 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=69.8 pTM=0.452 ipTM=0.239 tol=3.11
2024-12-08 19:11:16,806 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=69.9 pTM=0.469 ipTM=0.283 tol=2.46
2024-12-08 19:11:43,360 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=70.1 pTM=0.455 ipTM=0.243 tol=3.41
2024-12-08 19:12:09,895 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=69.6 pTM=0.458 ipTM=0.255 tol=1.3
2024-12-08 19:12:36,457 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=69.9 pTM=0.449 ipTM=0.23 tol=1.06
2024-12-08 19:13:02,982 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=69.8 pTM=0.467 ipTM=0.287 tol=1.37
2024-12-08 19:13:29,517 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=69.8 pTM=0.454 ipTM=0.248 tol=1.25
2024-12-08 19:13:56,059 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=69.6 pTM=0.465 ipTM=0.29 tol=1.39
2024-12-08 19:14:22,604 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=69.8 pTM=0.462 ipTM=0.27 tol=1.45
2024-12-08 19:14:22,605 alphafold2_multimer_v3_model_1_seed_000 took 929.9s (30 recycles)
2024-12-08 19:14:49,936 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=67.8 pTM=0.44 ipTM=0.205
2024-12-08 19:15:16,611 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=69.5 pTM=0.442 ipTM=0.213 tol=12.7
2024-12-08 19:15:43,321 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=70.4 pTM=0.453 ipTM=0.246 tol=8.58
2024-12-08 19:16:09,986 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=70.7 pTM=0.439 ipTM=0.23 tol=6.75
2024-12-08 19:16:36,615 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=70.7 pTM=0.44 ipTM=0.223 tol=4.16
2024-12-08 19:17:03,276 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=70.8 pTM=0.436 ipTM=0.211 tol=3.26
2024-12-08 19:17:29,925 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=70.8 pTM=0.439 ipTM=0.218 tol=1.92
2024-12-08 19:17:56,585 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=70.8 pTM=0.437 ipTM=0.199 tol=2.53
2024-12-08 19:18:23,234 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=70.9 pTM=0.442 ipTM=0.215 tol=2.11
2024-12-08 19:18:49,875 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=70.8 pTM=0.441 ipTM=0.21 tol=2.65
2024-12-08 19:19:16,496 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=70.7 pTM=0.438 ipTM=0.208 tol=3.09
2024-12-08 19:19:43,162 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=70.6 pTM=0.435 ipTM=0.199 tol=2.12
2024-12-08 19:20:09,814 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=70.6 pTM=0.443 ipTM=0.204 tol=3.24
2024-12-08 19:20:36,476 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=70.8 pTM=0.441 ipTM=0.209 tol=7.81
2024-12-08 19:21:03,100 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=70.6 pTM=0.441 ipTM=0.205 tol=5.45
2024-12-08 19:21:29,743 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=70.6 pTM=0.437 ipTM=0.202 tol=6.7
2024-12-08 19:21:56,374 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=70.4 pTM=0.44 ipTM=0.206 tol=3.56
2024-12-08 19:22:23,035 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=70.8 pTM=0.438 ipTM=0.203 tol=3.6
2024-12-08 19:22:49,682 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=70.6 pTM=0.44 ipTM=0.208 tol=4.29
2024-12-08 19:23:16,348 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=71.1 pTM=0.443 ipTM=0.213 tol=5.72
2024-12-08 19:23:42,985 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=70.6 pTM=0.444 ipTM=0.207 tol=3.92
2024-12-08 19:24:09,654 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=70.7 pTM=0.44 ipTM=0.206 tol=1.93
2024-12-08 19:24:36,299 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=70.5 pTM=0.443 ipTM=0.199 tol=3.19
2024-12-08 19:25:02,955 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=70.8 pTM=0.439 ipTM=0.205 tol=2.33
2024-12-08 19:25:29,589 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=70.6 pTM=0.441 ipTM=0.2 tol=1.96
2024-12-08 19:25:56,234 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=70.6 pTM=0.435 ipTM=0.339 tol=4.25
2024-12-08 19:26:22,881 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=70.6 pTM=0.442 ipTM=0.28 tol=2.76
2024-12-08 19:26:49,528 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=70.9 pTM=0.448 ipTM=0.293 tol=2.31
2024-12-08 19:27:16,170 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=70.7 pTM=0.438 ipTM=0.216 tol=2.93
2024-12-08 19:27:42,783 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=70.6 pTM=0.455 ipTM=0.254 tol=3.32
2024-12-08 19:28:09,413 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=70.7 pTM=0.465 ipTM=0.306 tol=3.06
2024-12-08 19:28:09,415 alphafold2_multimer_v3_model_2_seed_000 took 826.0s (30 recycles)
2024-12-08 19:28:36,817 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=68.1 pTM=0.43 ipTM=0.182
2024-12-08 19:29:03,418 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=70 pTM=0.483 ipTM=0.298 tol=8.36
2024-12-08 19:29:30,053 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=70.2 pTM=0.452 ipTM=0.211 tol=6.61
2024-12-08 19:29:56,693 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=69.8 pTM=0.471 ipTM=0.282 tol=5.86
2024-12-08 19:30:23,287 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=70.2 pTM=0.461 ipTM=0.251 tol=4.27
2024-12-08 19:30:49,885 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=69.8 pTM=0.483 ipTM=0.33 tol=3.17
2024-12-08 19:31:16,500 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=70.2 pTM=0.467 ipTM=0.291 tol=2.52
2024-12-08 19:31:43,098 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=69.8 pTM=0.475 ipTM=0.287 tol=2.06
2024-12-08 19:32:09,751 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=69.9 pTM=0.445 ipTM=0.206 tol=4.21
2024-12-08 19:32:36,363 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=69.8 pTM=0.467 ipTM=0.272 tol=3.97
2024-12-08 19:33:02,963 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=70.2 pTM=0.461 ipTM=0.263 tol=2.64
2024-12-08 19:33:29,617 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=69.4 pTM=0.451 ipTM=0.21 tol=2.39
2024-12-08 19:33:56,213 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=70.2 pTM=0.486 ipTM=0.361 tol=3.32
2024-12-08 19:34:22,854 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=69.9 pTM=0.444 ipTM=0.204 tol=3.15
2024-12-08 19:34:49,474 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=69.8 pTM=0.469 ipTM=0.291 tol=2.15
2024-12-08 19:35:16,094 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=70.4 pTM=0.473 ipTM=0.314 tol=1.95
2024-12-08 19:35:42,726 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=69.6 pTM=0.45 ipTM=0.211 tol=2
2024-12-08 19:36:09,322 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=69.9 pTM=0.471 ipTM=0.283 tol=1.71
2024-12-08 19:36:35,960 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=70.1 pTM=0.45 ipTM=0.22 tol=2.11
2024-12-08 19:37:02,553 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=69.8 pTM=0.48 ipTM=0.324 tol=2.47
2024-12-08 19:37:29,157 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=70.3 pTM=0.47 ipTM=0.301 tol=1.85
2024-12-08 19:37:55,785 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=69.7 pTM=0.455 ipTM=0.217 tol=1.81
2024-12-08 19:38:22,397 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=69.8 pTM=0.46 ipTM=0.239 tol=1.31
2024-12-08 19:38:49,055 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=69.8 pTM=0.446 ipTM=0.202 tol=2.77
2024-12-08 19:39:15,689 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=70 pTM=0.471 ipTM=0.362 tol=4.99
2024-12-08 19:39:42,318 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=69.9 pTM=0.452 ipTM=0.242 tol=3.13
2024-12-08 19:40:08,993 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=69.3 pTM=0.448 ipTM=0.203 tol=4.09
2024-12-08 19:40:35,642 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=69.8 pTM=0.447 ipTM=0.208 tol=2.57
2024-12-08 19:41:02,248 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=69.6 pTM=0.47 ipTM=0.288 tol=3.18
2024-12-08 19:41:28,873 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=70.2 pTM=0.478 ipTM=0.333 tol=1.82
2024-12-08 19:41:55,497 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=69.6 pTM=0.453 ipTM=0.219 tol=1.75
2024-12-08 19:41:55,498 alphafold2_multimer_v3_model_3_seed_000 took 825.3s (30 recycles)
2024-12-08 19:42:22,939 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=68.3 pTM=0.432 ipTM=0.181
2024-12-08 19:42:49,611 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=69.5 pTM=0.447 ipTM=0.187 tol=6.57
2024-12-08 19:43:16,293 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=69.2 pTM=0.465 ipTM=0.265 tol=7.4
2024-12-08 19:43:42,928 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=69.4 pTM=0.46 ipTM=0.254 tol=6.51
2024-12-08 19:44:09,602 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=69.7 pTM=0.455 ipTM=0.225 tol=5.37
2024-12-08 19:44:36,231 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=69.1 pTM=0.451 ipTM=0.202 tol=4.29
2024-12-08 19:45:02,873 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=69.4 pTM=0.443 ipTM=0.189 tol=2.21
2024-12-08 19:45:29,509 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=69.4 pTM=0.455 ipTM=0.215 tol=2.98
2024-12-08 19:45:56,188 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=69.9 pTM=0.447 ipTM=0.195 tol=4.27
2024-12-08 19:46:22,824 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=69.2 pTM=0.45 ipTM=0.2 tol=5.45
2024-12-08 19:46:49,490 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=69.6 pTM=0.442 ipTM=0.186 tol=5.06
2024-12-08 19:47:16,141 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=69 pTM=0.446 ipTM=0.192 tol=4.13
2024-12-08 19:47:42,850 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=69.7 pTM=0.445 ipTM=0.19 tol=2.97
2024-12-08 19:48:09,518 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=69.4 pTM=0.452 ipTM=0.203 tol=2.87
2024-12-08 19:48:36,204 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=70.1 pTM=0.448 ipTM=0.199 tol=4.13
2024-12-08 19:49:02,847 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=69.8 pTM=0.455 ipTM=0.214 tol=4.58
2024-12-08 19:49:29,539 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=69.8 pTM=0.441 ipTM=0.189 tol=4.99
2024-12-08 19:49:56,196 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=69.6 pTM=0.448 ipTM=0.197 tol=4.64
2024-12-08 19:50:22,896 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=69.8 pTM=0.443 ipTM=0.188 tol=3.52
2024-12-08 19:50:49,570 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=69.7 pTM=0.448 ipTM=0.196 tol=3.91
2024-12-08 19:51:16,271 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70.2 pTM=0.448 ipTM=0.203 tol=4.82
2024-12-08 19:51:42,932 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=69.6 pTM=0.453 ipTM=0.207 tol=5.24
2024-12-08 19:52:09,580 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=69.9 pTM=0.448 ipTM=0.198 tol=3.23
2024-12-08 19:52:36,242 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=69.4 pTM=0.451 ipTM=0.2 tol=2.64
2024-12-08 19:53:02,917 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=69.8 pTM=0.447 ipTM=0.195 tol=3.47
2024-12-08 19:53:29,585 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=69.4 pTM=0.449 ipTM=0.198 tol=3.96
2024-12-08 19:53:56,247 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=69.8 pTM=0.458 ipTM=0.245 tol=4.89
2024-12-08 19:54:22,908 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=69.8 pTM=0.445 ipTM=0.191 tol=3.14
2024-12-08 19:54:49,536 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=69.4 pTM=0.449 ipTM=0.198 tol=3.28
2024-12-08 19:55:16,231 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=69.7 pTM=0.446 ipTM=0.194 tol=3.25
2024-12-08 19:55:42,886 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=69.2 pTM=0.448 ipTM=0.198 tol=3.21
2024-12-08 19:55:42,887 alphafold2_multimer_v3_model_4_seed_000 took 826.6s (30 recycles)
2024-12-08 19:56:10,294 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=67.4 pTM=0.448 ipTM=0.245
2024-12-08 19:56:36,983 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=69.5 pTM=0.451 ipTM=0.227 tol=9.3
2024-12-08 19:57:03,677 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=69.2 pTM=0.448 ipTM=0.199 tol=7.18
2024-12-08 19:57:30,355 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=69.4 pTM=0.45 ipTM=0.21 tol=4.64
2024-12-08 19:57:57,018 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=69.4 pTM=0.444 ipTM=0.201 tol=4.01
2024-12-08 19:58:23,681 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=69.2 pTM=0.459 ipTM=0.264 tol=3.79
2024-12-08 19:58:50,339 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=69.6 pTM=0.445 ipTM=0.237 tol=3.35
2024-12-08 19:59:16,967 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=69.4 pTM=0.457 ipTM=0.259 tol=3.43
2024-12-08 19:59:43,630 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=69.9 pTM=0.447 ipTM=0.235 tol=2.86
2024-12-08 20:00:10,288 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=69.4 pTM=0.451 ipTM=0.229 tol=3.05
2024-12-08 20:00:36,948 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=69.8 pTM=0.443 ipTM=0.218 tol=2.17
2024-12-08 20:01:03,606 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=69.2 pTM=0.457 ipTM=0.251 tol=2.54
2024-12-08 20:01:30,262 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=69.8 pTM=0.45 ipTM=0.248 tol=3.73
2024-12-08 20:01:56,889 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=69.7 pTM=0.477 ipTM=0.316 tol=2.91
2024-12-08 20:02:23,528 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=70.1 pTM=0.453 ipTM=0.253 tol=2.51
2024-12-08 20:02:50,153 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=69.6 pTM=0.469 ipTM=0.29 tol=2.4
2024-12-08 20:03:16,805 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=69.8 pTM=0.45 ipTM=0.248 tol=3.37
2024-12-08 20:03:43,442 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=69.6 pTM=0.466 ipTM=0.274 tol=2.25
2024-12-08 20:04:10,088 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=70 pTM=0.452 ipTM=0.241 tol=3.15
2024-12-08 20:04:36,714 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=69.8 pTM=0.474 ipTM=0.297 tol=3.11
2024-12-08 20:05:03,347 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=70.1 pTM=0.46 ipTM=0.27 tol=4.07
2024-12-08 20:05:29,971 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=69.7 pTM=0.472 ipTM=0.296 tol=2.81
2024-12-08 20:05:56,610 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=70.1 pTM=0.452 ipTM=0.247 tol=3.28
2024-12-08 20:06:23,242 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=69.8 pTM=0.475 ipTM=0.303 tol=3.65
2024-12-08 20:06:49,876 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=70.2 pTM=0.465 ipTM=0.286 tol=3.57
2024-12-08 20:07:16,502 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=69.9 pTM=0.477 ipTM=0.334 tol=3.17
2024-12-08 20:07:43,145 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=70.1 pTM=0.452 ipTM=0.256 tol=3.07
2024-12-08 20:08:09,786 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=69.6 pTM=0.474 ipTM=0.31 tol=3.55
2024-12-08 20:08:36,417 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=70 pTM=0.459 ipTM=0.274 tol=2.37
2024-12-08 20:09:03,029 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=70.1 pTM=0.515 ipTM=0.448 tol=2.45
2024-12-08 20:09:29,647 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=70.4 pTM=0.493 ipTM=0.397 tol=3.05
2024-12-08 20:09:29,648 alphafold2_multimer_v3_model_5_seed_000 took 826.0s (30 recycles)
2024-12-08 20:09:30,424 reranking models by 'multimer' metric
2024-12-08 20:09:33,761 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 20:10:48,066 Relaxation took 77.6s
2024-12-08 20:10:48,066 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=70.4 pTM=0.493 ipTM=0.397
2024-12-08 20:12:16,625 Relaxation took 88.6s
2024-12-08 20:12:16,625 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=70.7 pTM=0.465 ipTM=0.306
2024-12-08 20:13:45,609 Relaxation took 89.0s
2024-12-08 20:13:45,610 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=69.8 pTM=0.462 ipTM=0.27
2024-12-08 20:15:47,284 Relaxation took 121.7s
2024-12-08 20:15:47,284 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=69.6 pTM=0.453 ipTM=0.219
2024-12-08 20:17:41,387 Relaxation took 114.1s
2024-12-08 20:17:41,388 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=69.2 pTM=0.448 ipTM=0.198
2024-12-08 20:17:43,562 Done