2024-12-08 19:08:35,288 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 19:08:35,603 Running on GPU
2024-12-08 19:08:39,741 Found 6 citations for tools or databases
2024-12-08 19:08:39,741 Query 1/1: TRAF7_CENPQ (length 938)
2024-12-08 19:08:40,042 Sleeping for 8s. Reason: PENDING
2024-12-08 19:08:48,301 Sleeping for 6s. Reason: RUNNING
2024-12-08 19:08:54,555 Sleeping for 8s. Reason: RUNNING
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2024-12-08 19:09:12,065 Sleeping for 5s. Reason: RUNNING
2024-12-08 19:09:17,328 Sleeping for 5s. Reason: RUNNING
2024-12-08 19:09:22,586 Sleeping for 9s. Reason: RUNNING
2024-12-08 19:09:31,849 Sleeping for 9s. Reason: RUNNING
2024-12-08 19:09:41,109 Sleeping for 5s. Reason: RUNNING
2024-12-08 19:09:46,364 Sleeping for 6s. Reason: RUNNING
2024-12-08 19:09:52,614 Sleeping for 6s. Reason: RUNNING
2024-12-08 19:09:58,871 Sleeping for 8s. Reason: RUNNING
2024-12-08 19:10:07,133 Sleeping for 8s. Reason: RUNNING
2024-12-08 19:10:15,395 Sleeping for 9s. Reason: RUNNING
2024-12-08 19:10:24,649 Sleeping for 10s. Reason: RUNNING
2024-12-08 19:10:34,913 Sleeping for 6s. Reason: RUNNING
2024-12-08 19:10:41,171 Sleeping for 5s. Reason: RUNNING
2024-12-08 19:10:46,434 Sleeping for 10s. Reason: RUNNING
2024-12-08 19:10:56,698 Sleeping for 5s. Reason: RUNNING
2024-12-08 19:11:01,967 Sleeping for 8s. Reason: RUNNING
2024-12-08 19:11:10,224 Sleeping for 7s. Reason: RUNNING
2024-12-08 19:11:17,479 Sleeping for 5s. Reason: RUNNING
2024-12-08 19:11:22,734 Sleeping for 7s. Reason: RUNNING
2024-12-08 19:11:31,351 Sleeping for 7s. Reason: PENDING
2024-12-08 19:11:38,609 Sleeping for 6s. Reason: RUNNING
2024-12-08 19:11:44,864 Sleeping for 10s. Reason: RUNNING
2024-12-08 19:11:55,120 Sleeping for 9s. Reason: RUNNING
2024-12-08 19:12:04,373 Sleeping for 7s. Reason: RUNNING
2024-12-08 19:12:11,631 Sleeping for 7s. Reason: RUNNING
2024-12-08 19:12:18,883 Sleeping for 8s. Reason: RUNNING
2024-12-08 19:12:27,141 Sleeping for 9s. Reason: RUNNING
2024-12-08 19:12:36,389 Sleeping for 6s. Reason: RUNNING
2024-12-08 19:12:42,639 Sleeping for 8s. Reason: RUNNING
2024-12-08 19:12:50,892 Sleeping for 6s. Reason: RUNNING
2024-12-08 19:12:59,329 Setting max_seq=508, max_extra_seq=2048
2024-12-08 19:15:44,752 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=61.6 pTM=0.398 ipTM=0.162
2024-12-08 19:16:03,212 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=64.1 pTM=0.412 ipTM=0.272 tol=11.9
2024-12-08 19:16:21,691 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=63.7 pTM=0.407 ipTM=0.252 tol=6.62
2024-12-08 19:16:40,238 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=63.3 pTM=0.406 ipTM=0.205 tol=4.29
2024-12-08 19:16:58,816 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=63 pTM=0.404 ipTM=0.193 tol=3.77
2024-12-08 19:17:17,416 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=64.4 pTM=0.403 ipTM=0.254 tol=5.6
2024-12-08 19:17:36,039 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=64.2 pTM=0.403 ipTM=0.252 tol=5.29
2024-12-08 19:17:54,675 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=64.1 pTM=0.403 ipTM=0.239 tol=2.99
2024-12-08 19:18:13,326 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64 pTM=0.403 ipTM=0.233 tol=4.35
2024-12-08 19:18:31,985 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=63.8 pTM=0.4 ipTM=0.222 tol=2.29
2024-12-08 19:18:50,657 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=63.2 pTM=0.402 ipTM=0.196 tol=2.72
2024-12-08 19:19:09,346 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=63.3 pTM=0.404 ipTM=0.195 tol=2.92
2024-12-08 19:19:28,039 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=62.5 pTM=0.402 ipTM=0.185 tol=2.61
2024-12-08 19:19:46,731 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=64 pTM=0.408 ipTM=0.223 tol=6.21
2024-12-08 19:20:05,414 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=64.1 pTM=0.405 ipTM=0.241 tol=4.12
2024-12-08 19:20:24,115 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=63.4 pTM=0.4 ipTM=0.203 tol=3.01
2024-12-08 19:20:42,816 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=62.9 pTM=0.401 ipTM=0.186 tol=4.16
2024-12-08 19:21:01,509 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=64.8 pTM=0.404 ipTM=0.247 tol=5.64
2024-12-08 19:21:20,197 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.2 pTM=0.403 ipTM=0.246 tol=3.51
2024-12-08 19:21:38,908 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=63.7 pTM=0.403 ipTM=0.205 tol=3.64
2024-12-08 19:21:57,593 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=63.5 pTM=0.405 ipTM=0.194 tol=3.29
2024-12-08 19:22:16,279 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64.6 pTM=0.404 ipTM=0.244 tol=4.59
2024-12-08 19:22:34,974 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64 pTM=0.402 ipTM=0.234 tol=5
2024-12-08 19:22:53,673 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=63.2 pTM=0.401 ipTM=0.194 tol=4.95
2024-12-08 19:23:12,371 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=62.6 pTM=0.403 ipTM=0.19 tol=4.63
2024-12-08 19:23:31,077 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.2 pTM=0.405 ipTM=0.254 tol=5.57
2024-12-08 19:23:49,768 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=64.3 pTM=0.404 ipTM=0.248 tol=4.02
2024-12-08 19:24:08,474 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=64.2 pTM=0.404 ipTM=0.232 tol=1.56
2024-12-08 19:24:27,177 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=63.7 pTM=0.403 ipTM=0.215 tol=1.87
2024-12-08 19:24:45,889 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=63 pTM=0.402 ipTM=0.19 tol=2.66
2024-12-08 19:25:04,604 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=63 pTM=0.402 ipTM=0.188 tol=2.28
2024-12-08 19:25:04,605 alphafold2_multimer_v3_model_1_seed_000 took 720.1s (30 recycles)
2024-12-08 19:25:23,865 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=62.3 pTM=0.416 ipTM=0.229
2024-12-08 19:25:42,636 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=63.1 pTM=0.406 ipTM=0.202 tol=14.7
2024-12-08 19:26:01,424 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=63.2 pTM=0.391 ipTM=0.154 tol=11.1
2024-12-08 19:26:20,223 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=62.8 pTM=0.396 ipTM=0.171 tol=10.6
2024-12-08 19:26:39,029 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=63.1 pTM=0.395 ipTM=0.168 tol=7.83
2024-12-08 19:26:57,816 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=63.3 pTM=0.396 ipTM=0.173 tol=8.18
2024-12-08 19:27:16,594 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=63 pTM=0.398 ipTM=0.179 tol=3.54
2024-12-08 19:27:35,356 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=62.9 pTM=0.396 ipTM=0.179 tol=2.63
2024-12-08 19:27:54,128 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=62.9 pTM=0.398 ipTM=0.184 tol=1.91
2024-12-08 19:28:12,904 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=62.9 pTM=0.395 ipTM=0.173 tol=1.9
2024-12-08 19:28:31,670 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=62.8 pTM=0.397 ipTM=0.179 tol=3.89
2024-12-08 19:28:50,430 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=62.9 pTM=0.398 ipTM=0.178 tol=4.32
2024-12-08 19:29:09,193 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=63 pTM=0.398 ipTM=0.178 tol=4.73
2024-12-08 19:29:27,943 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=63 pTM=0.398 ipTM=0.176 tol=2.49
2024-12-08 19:29:46,692 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=63.1 pTM=0.398 ipTM=0.179 tol=2.08
2024-12-08 19:30:05,461 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=62.9 pTM=0.398 ipTM=0.178 tol=2.01
2024-12-08 19:30:24,217 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=62.6 pTM=0.401 ipTM=0.191 tol=2.34
2024-12-08 19:30:42,972 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=63.1 pTM=0.399 ipTM=0.183 tol=1.88
2024-12-08 19:31:01,731 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=63 pTM=0.4 ipTM=0.186 tol=1.39
2024-12-08 19:31:20,509 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=63.2 pTM=0.399 ipTM=0.18 tol=2.1
2024-12-08 19:31:39,278 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=62.9 pTM=0.4 ipTM=0.185 tol=1.49
2024-12-08 19:31:58,038 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=63.3 pTM=0.397 ipTM=0.175 tol=2.19
2024-12-08 19:32:16,800 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=63.1 pTM=0.399 ipTM=0.179 tol=2
2024-12-08 19:32:35,553 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=63 pTM=0.399 ipTM=0.179 tol=2.37
2024-12-08 19:32:54,301 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=62.9 pTM=0.399 ipTM=0.179 tol=1.79
2024-12-08 19:33:13,056 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=63 pTM=0.397 ipTM=0.176 tol=2.42
2024-12-08 19:33:31,810 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=62.8 pTM=0.399 ipTM=0.181 tol=1.37
2024-12-08 19:33:50,551 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=63.3 pTM=0.399 ipTM=0.179 tol=1.62
2024-12-08 19:34:09,283 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=62.8 pTM=0.401 ipTM=0.187 tol=1.87
2024-12-08 19:34:28,041 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=63.2 pTM=0.397 ipTM=0.174 tol=1.77
2024-12-08 19:34:46,786 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=63.1 pTM=0.398 ipTM=0.176 tol=2.43
2024-12-08 19:34:46,787 alphafold2_multimer_v3_model_2_seed_000 took 581.6s (30 recycles)
2024-12-08 19:35:06,050 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=59.9 pTM=0.4 ipTM=0.182
2024-12-08 19:35:24,788 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=61.9 pTM=0.419 ipTM=0.18 tol=6.8
2024-12-08 19:35:43,498 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=63.1 pTM=0.439 ipTM=0.212 tol=8.42
2024-12-08 19:36:02,213 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=63.1 pTM=0.439 ipTM=0.193 tol=4.11
2024-12-08 19:36:20,927 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=63.5 pTM=0.441 ipTM=0.203 tol=4.81
2024-12-08 19:36:39,611 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=63.3 pTM=0.436 ipTM=0.201 tol=6.63
2024-12-08 19:36:58,310 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=63.1 pTM=0.437 ipTM=0.194 tol=4.54
2024-12-08 19:37:16,976 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=64.2 pTM=0.45 ipTM=0.226 tol=5.4
2024-12-08 19:37:35,637 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=64.6 pTM=0.458 ipTM=0.239 tol=3.05
2024-12-08 19:37:54,277 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=65.1 pTM=0.467 ipTM=0.271 tol=3.96
2024-12-08 19:38:12,920 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=65.4 pTM=0.476 ipTM=0.291 tol=2.89
2024-12-08 19:38:31,560 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=66.2 pTM=0.486 ipTM=0.305 tol=3.16
2024-12-08 19:38:50,188 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=66 pTM=0.483 ipTM=0.321 tol=2.54
2024-12-08 19:39:08,829 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=66.2 pTM=0.487 ipTM=0.306 tol=3.08
2024-12-08 19:39:27,459 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=65.5 pTM=0.477 ipTM=0.308 tol=3.15
2024-12-08 19:39:46,107 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=66 pTM=0.485 ipTM=0.309 tol=2.85
2024-12-08 19:40:04,752 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=65.4 pTM=0.476 ipTM=0.303 tol=3.03
2024-12-08 19:40:23,410 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=65.8 pTM=0.478 ipTM=0.295 tol=2.61
2024-12-08 19:40:42,050 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=65.5 pTM=0.479 ipTM=0.311 tol=2.69
2024-12-08 19:41:00,688 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=65.7 pTM=0.478 ipTM=0.296 tol=3.25
2024-12-08 19:41:19,339 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=65.2 pTM=0.478 ipTM=0.3 tol=2.51
2024-12-08 19:41:37,983 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=65.6 pTM=0.477 ipTM=0.287 tol=2.03
2024-12-08 19:41:56,633 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=65.4 pTM=0.479 ipTM=0.286 tol=2.7
2024-12-08 19:42:15,272 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=66.1 pTM=0.485 ipTM=0.305 tol=3.13
2024-12-08 19:42:33,911 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=65.5 pTM=0.486 ipTM=0.306 tol=2.99
2024-12-08 19:42:52,562 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=65.6 pTM=0.477 ipTM=0.283 tol=3.07
2024-12-08 19:43:11,213 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=65.2 pTM=0.474 ipTM=0.292 tol=2.86
2024-12-08 19:43:29,839 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=65.5 pTM=0.476 ipTM=0.289 tol=2.72
2024-12-08 19:43:48,474 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=65.4 pTM=0.477 ipTM=0.304 tol=2.51
2024-12-08 19:44:07,124 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=65.2 pTM=0.472 ipTM=0.279 tol=2.52
2024-12-08 19:44:25,781 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=65 pTM=0.471 ipTM=0.285 tol=2.67
2024-12-08 19:44:25,782 alphafold2_multimer_v3_model_3_seed_000 took 578.4s (30 recycles)
2024-12-08 19:44:45,106 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=59.5 pTM=0.393 ipTM=0.167
2024-12-08 19:45:03,872 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=60.8 pTM=0.413 ipTM=0.201 tol=10.7
2024-12-08 19:45:22,601 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=62.5 pTM=0.44 ipTM=0.195 tol=19.4
2024-12-08 19:45:41,322 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=63.6 pTM=0.449 ipTM=0.203 tol=20.2
2024-12-08 19:46:00,033 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=63.4 pTM=0.439 ipTM=0.183 tol=6.22
2024-12-08 19:46:18,733 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=63.2 pTM=0.441 ipTM=0.2 tol=4.39
2024-12-08 19:46:37,436 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=63.5 pTM=0.438 ipTM=0.205 tol=4.23
2024-12-08 19:46:56,124 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64.2 pTM=0.452 ipTM=0.243 tol=3.13
2024-12-08 19:47:14,824 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=63.4 pTM=0.427 ipTM=0.188 tol=8.7
2024-12-08 19:47:33,535 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=63.2 pTM=0.432 ipTM=0.2 tol=6.97
2024-12-08 19:47:52,221 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=63.2 pTM=0.425 ipTM=0.187 tol=13.3
2024-12-08 19:48:10,897 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=63.5 pTM=0.436 ipTM=0.199 tol=5.85
2024-12-08 19:48:29,554 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=64.3 pTM=0.437 ipTM=0.201 tol=5.15
2024-12-08 19:48:48,213 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=64 pTM=0.451 ipTM=0.23 tol=4.17
2024-12-08 19:49:06,880 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=64.1 pTM=0.438 ipTM=0.196 tol=2.8
2024-12-08 19:49:25,539 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=62.9 pTM=0.434 ipTM=0.193 tol=3.81
2024-12-08 19:49:44,214 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=63.2 pTM=0.435 ipTM=0.204 tol=2.18
2024-12-08 19:50:02,873 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=63.1 pTM=0.431 ipTM=0.206 tol=2.23
2024-12-08 19:50:21,522 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=63.8 pTM=0.444 ipTM=0.231 tol=2.84
2024-12-08 19:50:40,193 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=63.7 pTM=0.438 ipTM=0.194 tol=3.89
2024-12-08 19:50:58,847 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64 pTM=0.453 ipTM=0.216 tol=3.6
2024-12-08 19:51:17,508 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=64.6 pTM=0.447 ipTM=0.207 tol=4.5
2024-12-08 19:51:36,162 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=63.9 pTM=0.451 ipTM=0.216 tol=4.17
2024-12-08 19:51:54,838 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=64 pTM=0.437 ipTM=0.19 tol=3.38
2024-12-08 19:52:13,511 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=63.3 pTM=0.438 ipTM=0.188 tol=4.39
2024-12-08 19:52:32,194 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=63.9 pTM=0.442 ipTM=0.198 tol=3.8
2024-12-08 19:52:50,853 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=63.6 pTM=0.446 ipTM=0.224 tol=2.94
2024-12-08 19:53:09,523 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=63.6 pTM=0.436 ipTM=0.193 tol=3.15
2024-12-08 19:53:28,183 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=63.8 pTM=0.448 ipTM=0.227 tol=3.75
2024-12-08 19:53:46,855 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=63.6 pTM=0.437 ipTM=0.207 tol=2.58
2024-12-08 19:54:05,515 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=63.9 pTM=0.451 ipTM=0.24 tol=2.73
2024-12-08 19:54:05,516 alphafold2_multimer_v3_model_4_seed_000 took 579.2s (30 recycles)
2024-12-08 19:54:24,867 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=59.6 pTM=0.394 ipTM=0.192
2024-12-08 19:54:43,655 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=60.2 pTM=0.412 ipTM=0.187 tol=13.8
2024-12-08 19:55:02,434 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=61.3 pTM=0.43 ipTM=0.185 tol=7.11
2024-12-08 19:55:21,164 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=64 pTM=0.465 ipTM=0.303 tol=6.85
2024-12-08 19:55:39,871 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=63.5 pTM=0.455 ipTM=0.25 tol=3.88
2024-12-08 19:55:58,566 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=64 pTM=0.46 ipTM=0.303 tol=3.88
2024-12-08 19:56:17,257 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=64.3 pTM=0.46 ipTM=0.269 tol=2.8
2024-12-08 19:56:35,941 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=63.9 pTM=0.461 ipTM=0.271 tol=2.25
2024-12-08 19:56:54,629 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=63.5 pTM=0.453 ipTM=0.234 tol=3.21
2024-12-08 19:57:13,309 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=64.2 pTM=0.466 ipTM=0.314 tol=3.49
2024-12-08 19:57:31,995 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=63.8 pTM=0.457 ipTM=0.254 tol=3.21
2024-12-08 19:57:50,694 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=64.1 pTM=0.464 ipTM=0.282 tol=2.43
2024-12-08 19:58:09,380 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=63.5 pTM=0.455 ipTM=0.24 tol=2.51
2024-12-08 19:58:28,072 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=64.1 pTM=0.469 ipTM=0.276 tol=3.24
2024-12-08 19:58:46,743 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=63.6 pTM=0.46 ipTM=0.232 tol=11.9
2024-12-08 19:59:05,410 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=64.1 pTM=0.476 ipTM=0.301 tol=2
2024-12-08 19:59:24,079 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=63.6 pTM=0.461 ipTM=0.246 tol=2.95
2024-12-08 19:59:42,761 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=63.3 pTM=0.459 ipTM=0.248 tol=2.42
2024-12-08 20:00:01,447 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=63.2 pTM=0.455 ipTM=0.218 tol=2.06
2024-12-08 20:00:20,131 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=63.2 pTM=0.467 ipTM=0.254 tol=1.86
2024-12-08 20:00:38,813 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=63.1 pTM=0.458 ipTM=0.207 tol=3.12
2024-12-08 20:00:57,508 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=62.9 pTM=0.45 ipTM=0.214 tol=4.13
2024-12-08 20:01:16,183 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=63.2 pTM=0.453 ipTM=0.214 tol=3.64
2024-12-08 20:01:34,866 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=63 pTM=0.458 ipTM=0.237 tol=3.08
2024-12-08 20:01:53,522 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=63.3 pTM=0.464 ipTM=0.231 tol=2.82
2024-12-08 20:02:12,194 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=63.3 pTM=0.458 ipTM=0.239 tol=2.24
2024-12-08 20:02:30,842 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=63.3 pTM=0.463 ipTM=0.237 tol=2.59
2024-12-08 20:02:49,486 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=63.1 pTM=0.458 ipTM=0.249 tol=2.68
2024-12-08 20:03:08,130 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=63.2 pTM=0.459 ipTM=0.241 tol=2.37
2024-12-08 20:03:26,787 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=63.1 pTM=0.457 ipTM=0.25 tol=2.5
2024-12-08 20:03:45,417 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=63.3 pTM=0.458 ipTM=0.241 tol=3.14
2024-12-08 20:03:45,417 alphafold2_multimer_v3_model_5_seed_000 took 579.4s (30 recycles)
2024-12-08 20:03:45,965 reranking models by 'multimer' metric
2024-12-08 20:03:49,377 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 20:05:09,948 Relaxation took 84.0s
2024-12-08 20:05:09,948 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=65 pTM=0.471 ipTM=0.285
2024-12-08 20:06:22,895 Relaxation took 72.9s
2024-12-08 20:06:22,895 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=63.3 pTM=0.458 ipTM=0.241
2024-12-08 20:07:32,587 Relaxation took 69.7s
2024-12-08 20:07:32,587 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=63.9 pTM=0.451 ipTM=0.24
2024-12-08 20:09:06,845 Relaxation took 94.3s
2024-12-08 20:09:06,845 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=63 pTM=0.402 ipTM=0.188
2024-12-08 20:10:30,695 Relaxation took 83.8s
2024-12-08 20:10:30,695 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=63.1 pTM=0.398 ipTM=0.176
2024-12-08 20:10:32,377 Done