2024-12-08 19:46:34,621 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 19:46:34,942 Running on GPU
2024-12-08 19:46:38,421 Found 6 citations for tools or databases
2024-12-08 19:46:38,421 Query 1/1: TRAF7_RALYL (length 961)
2024-12-08 19:46:38,726 Sleeping for 9s. Reason: PENDING
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2024-12-08 19:47:49,038 Sleeping for 5s. Reason: RUNNING
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2024-12-08 19:48:34,726 Sleeping for 6s. Reason: RUNNING
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2024-12-08 19:49:46,300 Sleeping for 7s. Reason: RUNNING
2024-12-08 19:49:56,120 Sleeping for 8s. Reason: PENDING
2024-12-08 19:50:04,375 Sleeping for 6s. Reason: RUNNING
2024-12-08 19:50:10,643 Sleeping for 6s. Reason: RUNNING
2024-12-08 19:50:16,898 Sleeping for 5s. Reason: RUNNING
2024-12-08 19:50:22,165 Sleeping for 10s. Reason: RUNNING
2024-12-08 19:50:32,422 Sleeping for 9s. Reason: RUNNING
2024-12-08 19:50:41,686 Sleeping for 8s. Reason: RUNNING
2024-12-08 19:50:49,947 Sleeping for 10s. Reason: RUNNING
2024-12-08 19:51:00,207 Sleeping for 7s. Reason: RUNNING
2024-12-08 19:51:07,462 Sleeping for 9s. Reason: RUNNING
2024-12-08 19:51:16,718 Sleeping for 5s. Reason: RUNNING
2024-12-08 19:51:21,970 Sleeping for 8s. Reason: RUNNING
2024-12-08 19:51:30,232 Sleeping for 9s. Reason: RUNNING
2024-12-08 19:51:39,488 Sleeping for 8s. Reason: RUNNING
2024-12-08 19:51:50,505 Setting max_seq=508, max_extra_seq=2048
2024-12-08 19:54:56,254 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=61.2 pTM=0.392 ipTM=0.181
2024-12-08 19:55:17,486 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=61.6 pTM=0.396 ipTM=0.194 tol=10.7
2024-12-08 19:55:38,767 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=61.3 pTM=0.399 ipTM=0.196 tol=5.69
2024-12-08 19:56:00,094 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=61.8 pTM=0.399 ipTM=0.2 tol=3.51
2024-12-08 19:56:21,466 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=61.7 pTM=0.399 ipTM=0.203 tol=3.22
2024-12-08 19:56:42,853 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=61.6 pTM=0.4 ipTM=0.202 tol=1.8
2024-12-08 19:57:04,272 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=61.8 pTM=0.402 ipTM=0.208 tol=2.07
2024-12-08 19:57:25,688 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=61.8 pTM=0.404 ipTM=0.214 tol=1.98
2024-12-08 19:57:47,113 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=61.9 pTM=0.404 ipTM=0.212 tol=2.23
2024-12-08 19:58:08,544 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=61.9 pTM=0.404 ipTM=0.215 tol=2.59
2024-12-08 19:58:29,965 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=62.1 pTM=0.404 ipTM=0.216 tol=2.17
2024-12-08 19:58:51,394 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=62 pTM=0.406 ipTM=0.219 tol=1.56
2024-12-08 19:59:12,823 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=62.3 pTM=0.403 ipTM=0.212 tol=1.32
2024-12-08 19:59:34,245 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=61.3 pTM=0.402 ipTM=0.211 tol=6.22
2024-12-08 19:59:55,682 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=62.2 pTM=0.403 ipTM=0.213 tol=4.42
2024-12-08 20:00:17,110 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=61.9 pTM=0.403 ipTM=0.214 tol=3.25
2024-12-08 20:00:38,554 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=62 pTM=0.402 ipTM=0.208 tol=2.82
2024-12-08 20:01:00,002 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=62.1 pTM=0.404 ipTM=0.214 tol=2.86
2024-12-08 20:01:21,443 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=62 pTM=0.404 ipTM=0.214 tol=1.21
2024-12-08 20:01:42,886 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=62.1 pTM=0.404 ipTM=0.216 tol=1.73
2024-12-08 20:02:04,333 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=62.1 pTM=0.403 ipTM=0.213 tol=1.76
2024-12-08 20:02:25,778 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=62.1 pTM=0.403 ipTM=0.213 tol=1.79
2024-12-08 20:02:47,227 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=62 pTM=0.403 ipTM=0.211 tol=1.13
2024-12-08 20:03:08,679 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=61.9 pTM=0.402 ipTM=0.211 tol=1.92
2024-12-08 20:03:30,139 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=62 pTM=0.403 ipTM=0.212 tol=1.67
2024-12-08 20:03:51,591 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=62 pTM=0.402 ipTM=0.211 tol=1.6
2024-12-08 20:04:13,035 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=62 pTM=0.403 ipTM=0.213 tol=3.27
2024-12-08 20:04:34,486 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=61.7 pTM=0.405 ipTM=0.212 tol=3.74
2024-12-08 20:04:55,937 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=61.7 pTM=0.405 ipTM=0.214 tol=1.77
2024-12-08 20:05:17,399 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=62 pTM=0.404 ipTM=0.222 tol=1.43
2024-12-08 20:05:38,844 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=61.8 pTM=0.404 ipTM=0.214 tol=1.26
2024-12-08 20:05:38,844 alphafold2_multimer_v3_model_1_seed_000 took 823.3s (30 recycles)
2024-12-08 20:06:00,915 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=62.8 pTM=0.403 ipTM=0.184
2024-12-08 20:06:22,414 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=61.8 pTM=0.41 ipTM=0.224 tol=15.5
2024-12-08 20:06:43,924 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=63.6 pTM=0.394 ipTM=0.232 tol=8.59
2024-12-08 20:07:05,428 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=63.7 pTM=0.403 ipTM=0.229 tol=6.21
2024-12-08 20:07:26,925 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=64.1 pTM=0.397 ipTM=0.229 tol=4.9
2024-12-08 20:07:48,418 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=64.6 pTM=0.398 ipTM=0.231 tol=4.17
2024-12-08 20:08:09,907 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=64.9 pTM=0.399 ipTM=0.235 tol=2.27
2024-12-08 20:08:31,406 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=64.7 pTM=0.399 ipTM=0.233 tol=2.9
2024-12-08 20:08:52,896 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=64.9 pTM=0.399 ipTM=0.236 tol=2.79
2024-12-08 20:09:14,391 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=65 pTM=0.399 ipTM=0.237 tol=2.74
2024-12-08 20:09:35,870 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=65 pTM=0.399 ipTM=0.237 tol=3.22
2024-12-08 20:09:57,342 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=65.1 pTM=0.4 ipTM=0.238 tol=4.48
2024-12-08 20:10:18,808 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=65.2 pTM=0.4 ipTM=0.237 tol=3.3
2024-12-08 20:10:40,286 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=65.1 pTM=0.398 ipTM=0.238 tol=1.51
2024-12-08 20:11:01,756 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=65.4 pTM=0.399 ipTM=0.239 tol=1.06
2024-12-08 20:11:23,226 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=65.1 pTM=0.398 ipTM=0.237 tol=1.62
2024-12-08 20:11:44,702 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=65.2 pTM=0.397 ipTM=0.239 tol=2.22
2024-12-08 20:12:06,175 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=64.9 pTM=0.4 ipTM=0.239 tol=2.39
2024-12-08 20:12:27,638 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=65.3 pTM=0.398 ipTM=0.24 tol=1.98
2024-12-08 20:12:49,088 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=65.4 pTM=0.4 ipTM=0.24 tol=3.42
2024-12-08 20:13:10,559 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=65.1 pTM=0.398 ipTM=0.239 tol=2.32
2024-12-08 20:13:32,012 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=65.2 pTM=0.397 ipTM=0.237 tol=1.39
2024-12-08 20:13:53,472 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=65.1 pTM=0.398 ipTM=0.24 tol=1.8
2024-12-08 20:14:14,926 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=65.1 pTM=0.396 ipTM=0.241 tol=1.47
2024-12-08 20:14:36,382 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=65.2 pTM=0.398 ipTM=0.241 tol=1.11
2024-12-08 20:14:57,846 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=65.3 pTM=0.396 ipTM=0.24 tol=0.922
2024-12-08 20:15:19,312 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=65.3 pTM=0.397 ipTM=0.238 tol=0.988
2024-12-08 20:15:40,773 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=65.1 pTM=0.397 ipTM=0.237 tol=1.87
2024-12-08 20:16:02,226 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=65.2 pTM=0.397 ipTM=0.24 tol=2.01
2024-12-08 20:16:23,683 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=65 pTM=0.396 ipTM=0.238 tol=1.62
2024-12-08 20:16:45,143 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=64.9 pTM=0.397 ipTM=0.238 tol=1.77
2024-12-08 20:16:45,144 alphafold2_multimer_v3_model_2_seed_000 took 665.7s (30 recycles)
2024-12-08 20:17:07,222 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=62 pTM=0.387 ipTM=0.155
2024-12-08 20:17:28,729 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=62.1 pTM=0.396 ipTM=0.191 tol=17.5
2024-12-08 20:17:50,221 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=61.9 pTM=0.399 ipTM=0.188 tol=11.3
2024-12-08 20:18:11,730 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=62.2 pTM=0.408 ipTM=0.234 tol=8.38
2024-12-08 20:18:33,257 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=62.2 pTM=0.405 ipTM=0.209 tol=4.59
2024-12-08 20:18:54,779 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=62.2 pTM=0.403 ipTM=0.205 tol=3.3
2024-12-08 20:19:16,324 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=62 pTM=0.403 ipTM=0.205 tol=6.78
2024-12-08 20:19:37,874 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=61.7 pTM=0.401 ipTM=0.199 tol=3.84
2024-12-08 20:19:59,419 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61.5 pTM=0.401 ipTM=0.203 tol=3.47
2024-12-08 20:20:20,962 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=61.4 pTM=0.396 ipTM=0.189 tol=3.25
2024-12-08 20:20:42,531 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=60.9 pTM=0.394 ipTM=0.183 tol=2.93
2024-12-08 20:21:04,100 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=60.1 pTM=0.397 ipTM=0.195 tol=5.7
2024-12-08 20:21:25,668 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=60.5 pTM=0.394 ipTM=0.183 tol=6.17
2024-12-08 20:21:47,219 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=61.7 pTM=0.398 ipTM=0.223 tol=11
2024-12-08 20:22:08,735 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=62.6 pTM=0.392 ipTM=0.238 tol=9.66
2024-12-08 20:22:30,242 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=62.2 pTM=0.394 ipTM=0.234 tol=6.41
2024-12-08 20:22:51,728 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=62.3 pTM=0.396 ipTM=0.235 tol=6.56
2024-12-08 20:23:13,212 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=62.8 pTM=0.402 ipTM=0.244 tol=4.56
2024-12-08 20:23:34,692 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=63.1 pTM=0.401 ipTM=0.251 tol=4.09
2024-12-08 20:23:56,188 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=63.2 pTM=0.401 ipTM=0.247 tol=4.23
2024-12-08 20:24:17,666 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=63.2 pTM=0.403 ipTM=0.248 tol=2.67
2024-12-08 20:24:39,134 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=63 pTM=0.402 ipTM=0.248 tol=2.24
2024-12-08 20:25:00,638 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=63.4 pTM=0.401 ipTM=0.254 tol=2.36
2024-12-08 20:25:22,128 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=63.3 pTM=0.403 ipTM=0.256 tol=1.4
2024-12-08 20:25:43,624 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=63.5 pTM=0.402 ipTM=0.257 tol=1.78
2024-12-08 20:26:05,099 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=63.4 pTM=0.403 ipTM=0.259 tol=1.4
2024-12-08 20:26:26,557 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=63.3 pTM=0.403 ipTM=0.25 tol=1.09
2024-12-08 20:26:48,015 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=63.3 pTM=0.404 ipTM=0.252 tol=1.47
2024-12-08 20:27:09,453 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=63.3 pTM=0.402 ipTM=0.247 tol=0.91
2024-12-08 20:27:30,903 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=63.2 pTM=0.404 ipTM=0.246 tol=1.01
2024-12-08 20:27:52,346 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=63.4 pTM=0.402 ipTM=0.253 tol=0.909
2024-12-08 20:27:52,347 alphafold2_multimer_v3_model_3_seed_000 took 666.6s (30 recycles)
2024-12-08 20:28:14,454 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=61.5 pTM=0.406 ipTM=0.179
2024-12-08 20:28:35,951 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=62.7 pTM=0.426 ipTM=0.201 tol=13.4
2024-12-08 20:28:57,418 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=63.9 pTM=0.441 ipTM=0.193 tol=15.4
2024-12-08 20:29:18,888 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=64.6 pTM=0.45 ipTM=0.206 tol=6.86
2024-12-08 20:29:40,344 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64.5 pTM=0.456 ipTM=0.257 tol=5.8
2024-12-08 20:30:01,779 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=65.9 pTM=0.466 ipTM=0.319 tol=4
2024-12-08 20:30:23,212 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=66.7 pTM=0.479 ipTM=0.374 tol=2.8
2024-12-08 20:30:44,649 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=66.9 pTM=0.484 ipTM=0.376 tol=3.19
2024-12-08 20:31:06,085 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=66.4 pTM=0.477 ipTM=0.368 tol=2.08
2024-12-08 20:31:27,523 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=66.8 pTM=0.485 ipTM=0.382 tol=2.94
2024-12-08 20:31:48,941 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=66.7 pTM=0.481 ipTM=0.38 tol=3.94
2024-12-08 20:32:10,364 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=66.9 pTM=0.484 ipTM=0.378 tol=2.43
2024-12-08 20:32:31,785 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=66.6 pTM=0.485 ipTM=0.381 tol=2.14
2024-12-08 20:32:53,214 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=66.6 pTM=0.483 ipTM=0.379 tol=2.02
2024-12-08 20:33:14,648 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=66.6 pTM=0.478 ipTM=0.369 tol=1.8
2024-12-08 20:33:36,082 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=66.9 pTM=0.484 ipTM=0.375 tol=1.13
2024-12-08 20:33:57,502 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=66.7 pTM=0.479 ipTM=0.369 tol=1.82
2024-12-08 20:34:18,927 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=66.7 pTM=0.485 ipTM=0.372 tol=1.44
2024-12-08 20:34:40,372 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=66.9 pTM=0.481 ipTM=0.374 tol=2.23
2024-12-08 20:35:01,810 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=67.1 pTM=0.483 ipTM=0.378 tol=3.03
2024-12-08 20:35:23,260 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=66.7 pTM=0.48 ipTM=0.372 tol=3.07
2024-12-08 20:35:44,706 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=66.8 pTM=0.481 ipTM=0.374 tol=3.31
2024-12-08 20:36:06,144 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=66.9 pTM=0.479 ipTM=0.368 tol=4.29
2024-12-08 20:36:27,590 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=66.4 pTM=0.477 ipTM=0.36 tol=2.85
2024-12-08 20:36:49,031 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=66.8 pTM=0.477 ipTM=0.365 tol=2.72
2024-12-08 20:37:10,474 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=66.8 pTM=0.477 ipTM=0.37 tol=2.51
2024-12-08 20:37:31,915 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=67 pTM=0.477 ipTM=0.374 tol=2.63
2024-12-08 20:37:53,366 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=66.9 pTM=0.473 ipTM=0.366 tol=1.79
2024-12-08 20:38:14,806 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=67.1 pTM=0.474 ipTM=0.365 tol=2.07
2024-12-08 20:38:36,251 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=67.1 pTM=0.473 ipTM=0.368 tol=2.53
2024-12-08 20:38:57,693 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=67.5 pTM=0.475 ipTM=0.376 tol=1.76
2024-12-08 20:38:57,694 alphafold2_multimer_v3_model_4_seed_000 took 664.8s (30 recycles)
2024-12-08 20:39:19,863 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=61.8 pTM=0.393 ipTM=0.173
2024-12-08 20:39:41,438 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=62 pTM=0.394 ipTM=0.178 tol=14
2024-12-08 20:40:03,037 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=62.1 pTM=0.395 ipTM=0.179 tol=9.25
2024-12-08 20:40:24,614 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=62.4 pTM=0.394 ipTM=0.176 tol=7.4
2024-12-08 20:40:46,200 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=62.8 pTM=0.394 ipTM=0.173 tol=5.8
2024-12-08 20:41:07,775 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=63.1 pTM=0.392 ipTM=0.17 tol=3.9
2024-12-08 20:41:29,358 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=63.2 pTM=0.392 ipTM=0.169 tol=4.05
2024-12-08 20:41:50,937 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=63.2 pTM=0.391 ipTM=0.167 tol=4.06
2024-12-08 20:42:12,505 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=63.3 pTM=0.392 ipTM=0.17 tol=2.58
2024-12-08 20:42:34,062 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=63.5 pTM=0.392 ipTM=0.17 tol=3.89
2024-12-08 20:42:55,622 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=63.4 pTM=0.392 ipTM=0.17 tol=1.5
2024-12-08 20:43:17,192 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=63.4 pTM=0.392 ipTM=0.17 tol=1.68
2024-12-08 20:43:38,749 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=63.7 pTM=0.393 ipTM=0.172 tol=1.57
2024-12-08 20:44:00,314 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=63.7 pTM=0.393 ipTM=0.172 tol=4.2
2024-12-08 20:44:21,879 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=63.5 pTM=0.393 ipTM=0.173 tol=4.33
2024-12-08 20:44:43,448 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=63.3 pTM=0.394 ipTM=0.175 tol=2
2024-12-08 20:45:04,998 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=63.2 pTM=0.393 ipTM=0.174 tol=4.24
2024-12-08 20:45:26,571 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=63.2 pTM=0.393 ipTM=0.173 tol=4.34
2024-12-08 20:45:48,136 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=63.1 pTM=0.393 ipTM=0.171 tol=4.05
2024-12-08 20:46:09,704 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=63.3 pTM=0.393 ipTM=0.174 tol=4.07
2024-12-08 20:46:31,265 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=63.3 pTM=0.393 ipTM=0.172 tol=2.45
2024-12-08 20:46:52,842 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=63.3 pTM=0.392 ipTM=0.171 tol=4.95
2024-12-08 20:47:14,414 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=63.3 pTM=0.392 ipTM=0.169 tol=4
2024-12-08 20:47:35,983 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=63.2 pTM=0.392 ipTM=0.171 tol=2.32
2024-12-08 20:47:57,541 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=63.2 pTM=0.392 ipTM=0.17 tol=2.36
2024-12-08 20:48:19,125 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=63.2 pTM=0.391 ipTM=0.174 tol=4.31
2024-12-08 20:48:40,689 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=63.5 pTM=0.391 ipTM=0.181 tol=4.7
2024-12-08 20:49:02,267 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=63.4 pTM=0.392 ipTM=0.189 tol=4.55
2024-12-08 20:49:23,842 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=63.2 pTM=0.393 ipTM=0.171 tol=4.91
2024-12-08 20:49:45,417 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=63.3 pTM=0.392 ipTM=0.172 tol=5.26
2024-12-08 20:50:06,984 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=63.2 pTM=0.392 ipTM=0.17 tol=5.45
2024-12-08 20:50:06,985 alphafold2_multimer_v3_model_5_seed_000 took 668.7s (30 recycles)
2024-12-08 20:50:07,559 reranking models by 'multimer' metric
2024-12-08 20:50:09,814 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 20:51:39,247 Relaxation took 91.7s
2024-12-08 20:51:39,247 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=67.5 pTM=0.475 ipTM=0.376
2024-12-08 20:52:47,532 Relaxation took 68.3s
2024-12-08 20:52:47,532 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=63.4 pTM=0.402 ipTM=0.253
2024-12-08 20:54:20,540 Relaxation took 93.0s
2024-12-08 20:54:20,540 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=64.9 pTM=0.397 ipTM=0.238
2024-12-08 20:55:42,929 Relaxation took 82.4s
2024-12-08 20:55:42,929 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=61.8 pTM=0.404 ipTM=0.214
2024-12-08 20:56:56,907 Relaxation took 74.0s
2024-12-08 20:56:56,907 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=63.2 pTM=0.392 ipTM=0.17
2024-12-08 20:56:58,683 Done