2024-12-08 20:17:57,636 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 20:17:57,938 Running on GPU
2024-12-08 20:17:59,004 Found 6 citations for tools or databases
2024-12-08 20:17:59,004 Query 1/1: TRIM11_CAMKK1 (length 973)
2024-12-08 20:17:59,265 Sleeping for 8s. Reason: PENDING
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2024-12-08 20:19:01,335 Sleeping for 5s. Reason: RUNNING
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2024-12-08 20:22:05,535 Sleeping for 10s. Reason: RUNNING
2024-12-08 20:22:15,792 Sleeping for 10s. Reason: RUNNING
2024-12-08 20:22:26,059 Sleeping for 10s. Reason: RUNNING
2024-12-08 20:22:36,314 Sleeping for 10s. Reason: RUNNING
2024-12-08 20:22:46,576 Sleeping for 7s. Reason: RUNNING
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2024-12-08 20:23:00,085 Sleeping for 8s. Reason: RUNNING
2024-12-08 20:23:08,340 Sleeping for 10s. Reason: RUNNING
2024-12-08 20:23:21,107 Sleeping for 5s. Reason: PENDING
2024-12-08 20:23:26,358 Sleeping for 9s. Reason: PENDING
2024-12-08 20:23:35,616 Sleeping for 9s. Reason: RUNNING
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2024-12-08 20:24:03,638 Sleeping for 6s. Reason: RUNNING
2024-12-08 20:24:09,895 Sleeping for 9s. Reason: RUNNING
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2024-12-08 20:24:29,415 Sleeping for 10s. Reason: RUNNING
2024-12-08 20:24:39,688 Sleeping for 6s. Reason: RUNNING
2024-12-08 20:24:45,956 Sleeping for 9s. Reason: RUNNING
2024-12-08 20:24:55,212 Sleeping for 7s. Reason: RUNNING
2024-12-08 20:25:02,474 Sleeping for 5s. Reason: RUNNING
2024-12-08 20:25:07,730 Sleeping for 10s. Reason: RUNNING
2024-12-08 20:25:17,991 Sleeping for 5s. Reason: RUNNING
2024-12-08 20:25:23,248 Sleeping for 9s. Reason: RUNNING
2024-12-08 20:25:32,505 Sleeping for 7s. Reason: RUNNING
2024-12-08 20:25:39,762 Sleeping for 6s. Reason: RUNNING
2024-12-08 20:25:46,020 Sleeping for 7s. Reason: RUNNING
2024-12-08 20:25:53,274 Sleeping for 5s. Reason: RUNNING
2024-12-08 20:25:58,526 Sleeping for 10s. Reason: RUNNING
2024-12-08 20:26:13,504 Setting max_seq=508, max_extra_seq=2048
2024-12-08 20:29:19,739 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=63.2 pTM=0.376 ipTM=0.143
2024-12-08 20:29:41,116 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=63.9 pTM=0.379 ipTM=0.151 tol=7.8
2024-12-08 20:30:02,577 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=65.1 pTM=0.377 ipTM=0.163 tol=6.45
2024-12-08 20:30:24,114 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=65.7 pTM=0.377 ipTM=0.161 tol=6
2024-12-08 20:30:45,698 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=65.9 pTM=0.382 ipTM=0.166 tol=4.66
2024-12-08 20:31:07,264 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=66 pTM=0.389 ipTM=0.2 tol=2.93
2024-12-08 20:31:28,869 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=66.7 pTM=0.389 ipTM=0.219 tol=3.67
2024-12-08 20:31:50,456 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=66.8 pTM=0.39 ipTM=0.263 tol=5.11
2024-12-08 20:32:12,045 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=67.1 pTM=0.392 ipTM=0.226 tol=8.09
2024-12-08 20:32:33,635 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=66.8 pTM=0.39 ipTM=0.176 tol=5.14
2024-12-08 20:32:55,254 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=67.2 pTM=0.393 ipTM=0.201 tol=4.36
2024-12-08 20:33:16,864 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=66.9 pTM=0.392 ipTM=0.207 tol=4.06
2024-12-08 20:33:38,476 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=67.1 pTM=0.394 ipTM=0.198 tol=3.11
2024-12-08 20:34:00,089 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=66.9 pTM=0.395 ipTM=0.266 tol=4.29
2024-12-08 20:34:21,707 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=67 pTM=0.399 ipTM=0.274 tol=3.32
2024-12-08 20:34:43,346 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=67.4 pTM=0.4 ipTM=0.308 tol=2.21
2024-12-08 20:35:04,986 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=66.9 pTM=0.397 ipTM=0.217 tol=3.16
2024-12-08 20:35:26,615 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=67.2 pTM=0.403 ipTM=0.33 tol=2.96
2024-12-08 20:35:48,240 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=66.8 pTM=0.401 ipTM=0.286 tol=2.13
2024-12-08 20:36:09,870 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=67.1 pTM=0.402 ipTM=0.252 tol=3.53
2024-12-08 20:36:31,504 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=66.9 pTM=0.4 ipTM=0.245 tol=3.17
2024-12-08 20:36:53,125 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=67.1 pTM=0.407 ipTM=0.324 tol=3.03
2024-12-08 20:37:14,756 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=66.9 pTM=0.403 ipTM=0.289 tol=3.46
2024-12-08 20:37:36,401 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=67.1 pTM=0.402 ipTM=0.246 tol=4.02
2024-12-08 20:37:58,031 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=67 pTM=0.404 ipTM=0.237 tol=2.98
2024-12-08 20:38:19,658 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=67.1 pTM=0.403 ipTM=0.334 tol=2.44
2024-12-08 20:38:41,283 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=67.2 pTM=0.404 ipTM=0.288 tol=2.26
2024-12-08 20:39:02,931 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=67.1 pTM=0.398 ipTM=0.244 tol=2.81
2024-12-08 20:39:24,587 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=67.2 pTM=0.403 ipTM=0.251 tol=1.98
2024-12-08 20:39:46,222 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=67.4 pTM=0.407 ipTM=0.324 tol=3.04
2024-12-08 20:40:07,859 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=67.2 pTM=0.404 ipTM=0.289 tol=2.98
2024-12-08 20:40:07,860 alphafold2_multimer_v3_model_1_seed_000 took 829.3s (30 recycles)
2024-12-08 20:40:30,056 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=60.6 pTM=0.373 ipTM=0.151
2024-12-08 20:40:51,688 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=60.4 pTM=0.386 ipTM=0.156 tol=13.7
2024-12-08 20:41:13,336 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=65.2 pTM=0.388 ipTM=0.164 tol=18.5
2024-12-08 20:41:35,019 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=67.1 pTM=0.389 ipTM=0.156 tol=20.2
2024-12-08 20:41:56,686 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67.1 pTM=0.406 ipTM=0.213 tol=11.2
2024-12-08 20:42:18,352 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=67.1 pTM=0.41 ipTM=0.231 tol=5.58
2024-12-08 20:42:40,012 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=66.9 pTM=0.409 ipTM=0.19 tol=3.95
2024-12-08 20:43:01,693 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=66.8 pTM=0.399 ipTM=0.164 tol=7.19
2024-12-08 20:43:23,387 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=66.8 pTM=0.399 ipTM=0.163 tol=2.2
2024-12-08 20:43:45,082 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=66.8 pTM=0.397 ipTM=0.161 tol=3.3
2024-12-08 20:44:06,776 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=66.6 pTM=0.397 ipTM=0.164 tol=3.66
2024-12-08 20:44:28,459 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=66.7 pTM=0.398 ipTM=0.163 tol=4.06
2024-12-08 20:44:50,142 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=66.8 pTM=0.402 ipTM=0.174 tol=3.2
2024-12-08 20:45:11,825 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=66.8 pTM=0.399 ipTM=0.164 tol=2.59
2024-12-08 20:45:33,507 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=66.6 pTM=0.4 ipTM=0.175 tol=4.26
2024-12-08 20:45:55,191 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=66.6 pTM=0.401 ipTM=0.166 tol=2.15
2024-12-08 20:46:16,882 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=66.8 pTM=0.399 ipTM=0.165 tol=3.12
2024-12-08 20:46:38,567 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=67.1 pTM=0.403 ipTM=0.179 tol=3.7
2024-12-08 20:47:00,253 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=66.7 pTM=0.399 ipTM=0.169 tol=2.4
2024-12-08 20:47:21,929 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=67 pTM=0.402 ipTM=0.184 tol=1.88
2024-12-08 20:47:43,585 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=66.6 pTM=0.4 ipTM=0.167 tol=3.06
2024-12-08 20:48:05,275 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=66.6 pTM=0.398 ipTM=0.163 tol=4.2
2024-12-08 20:48:26,958 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=66.6 pTM=0.399 ipTM=0.172 tol=4.2
2024-12-08 20:48:48,628 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=66.8 pTM=0.399 ipTM=0.166 tol=2.18
2024-12-08 20:49:10,302 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=66.6 pTM=0.401 ipTM=0.178 tol=1.79
2024-12-08 20:49:31,979 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=66.6 pTM=0.397 ipTM=0.163 tol=2.95
2024-12-08 20:49:53,655 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=66.8 pTM=0.397 ipTM=0.164 tol=2.75
2024-12-08 20:50:15,312 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=66.7 pTM=0.401 ipTM=0.178 tol=2.85
2024-12-08 20:50:36,951 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=66.9 pTM=0.402 ipTM=0.177 tol=1.5
2024-12-08 20:50:58,605 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=67 pTM=0.401 ipTM=0.172 tol=2.27
2024-12-08 20:51:20,261 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=66.9 pTM=0.399 ipTM=0.164 tol=2.75
2024-12-08 20:51:20,261 alphafold2_multimer_v3_model_2_seed_000 took 671.8s (30 recycles)
2024-12-08 20:51:42,479 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=60.5 pTM=0.364 ipTM=0.194
2024-12-08 20:52:04,135 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=63.7 pTM=0.38 ipTM=0.162 tol=21.2
2024-12-08 20:52:25,800 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=65 pTM=0.386 ipTM=0.15 tol=7.7
2024-12-08 20:52:47,477 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=64.5 pTM=0.39 ipTM=0.149 tol=4.15
2024-12-08 20:53:09,156 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=64.8 pTM=0.388 ipTM=0.147 tol=2.79
2024-12-08 20:53:30,824 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=64.3 pTM=0.386 ipTM=0.146 tol=2.51
2024-12-08 20:53:52,518 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=64.7 pTM=0.389 ipTM=0.152 tol=2.64
2024-12-08 20:54:14,225 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=64.6 pTM=0.388 ipTM=0.155 tol=2.79
2024-12-08 20:54:35,915 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=64.8 pTM=0.394 ipTM=0.168 tol=2.64
2024-12-08 20:54:57,579 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=64.3 pTM=0.393 ipTM=0.171 tol=2.57
2024-12-08 20:55:19,269 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=64.3 pTM=0.395 ipTM=0.162 tol=2.05
2024-12-08 20:55:40,961 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=64.4 pTM=0.398 ipTM=0.171 tol=3.85
2024-12-08 20:56:02,654 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=64.4 pTM=0.399 ipTM=0.164 tol=3.72
2024-12-08 20:56:24,348 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=64.4 pTM=0.394 ipTM=0.169 tol=4.38
2024-12-08 20:56:46,045 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=64.4 pTM=0.395 ipTM=0.158 tol=4.22
2024-12-08 20:57:07,733 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=64.3 pTM=0.393 ipTM=0.168 tol=4.83
2024-12-08 20:57:29,419 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=64.6 pTM=0.389 ipTM=0.162 tol=3.64
2024-12-08 20:57:51,088 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=64.9 pTM=0.393 ipTM=0.159 tol=2.95
2024-12-08 20:58:12,764 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=64.5 pTM=0.402 ipTM=0.176 tol=3.88
2024-12-08 20:58:34,464 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=65.2 pTM=0.399 ipTM=0.17 tol=4.45
2024-12-08 20:58:56,158 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=64.9 pTM=0.394 ipTM=0.157 tol=3.84
2024-12-08 20:59:17,840 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=65 pTM=0.395 ipTM=0.164 tol=3.03
2024-12-08 20:59:39,519 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=65 pTM=0.395 ipTM=0.161 tol=2.54
2024-12-08 21:00:01,215 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=65 pTM=0.396 ipTM=0.164 tol=2.78
2024-12-08 21:00:22,882 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=64.7 pTM=0.402 ipTM=0.17 tol=2.57
2024-12-08 21:00:44,568 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=65 pTM=0.395 ipTM=0.164 tol=2.36
2024-12-08 21:01:06,260 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=65.4 pTM=0.397 ipTM=0.163 tol=3.18
2024-12-08 21:01:27,935 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=65.2 pTM=0.401 ipTM=0.168 tol=2.33
2024-12-08 21:01:49,600 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=65.1 pTM=0.398 ipTM=0.164 tol=4.87
2024-12-08 21:02:11,248 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=65.4 pTM=0.4 ipTM=0.17 tol=4.09
2024-12-08 21:02:32,881 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=65.1 pTM=0.395 ipTM=0.17 tol=3.47
2024-12-08 21:02:32,882 alphafold2_multimer_v3_model_3_seed_000 took 672.0s (30 recycles)
2024-12-08 21:02:55,106 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=57.8 pTM=0.367 ipTM=0.151
2024-12-08 21:03:16,812 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=64.6 pTM=0.375 ipTM=0.164 tol=30.9
2024-12-08 21:03:38,470 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=64 pTM=0.387 ipTM=0.159 tol=8.28
2024-12-08 21:04:00,143 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=63.7 pTM=0.393 ipTM=0.165 tol=5.2
2024-12-08 21:04:21,833 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=63.4 pTM=0.396 ipTM=0.175 tol=3.9
2024-12-08 21:04:43,520 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=63.7 pTM=0.395 ipTM=0.17 tol=2.78
2024-12-08 21:05:05,215 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=64.1 pTM=0.401 ipTM=0.179 tol=3.02
2024-12-08 21:05:26,892 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64.1 pTM=0.4 ipTM=0.176 tol=5.5
2024-12-08 21:05:48,564 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=63.7 pTM=0.402 ipTM=0.177 tol=2.51
2024-12-08 21:06:10,230 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=63.6 pTM=0.404 ipTM=0.181 tol=2.34
2024-12-08 21:06:31,913 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=63.2 pTM=0.404 ipTM=0.184 tol=2.72
2024-12-08 21:06:53,580 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=63.8 pTM=0.405 ipTM=0.186 tol=3.08
2024-12-08 21:07:15,248 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=63.4 pTM=0.407 ipTM=0.186 tol=3.71
2024-12-08 21:07:36,925 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=63.8 pTM=0.405 ipTM=0.185 tol=2.08
2024-12-08 21:07:58,600 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=63.2 pTM=0.408 ipTM=0.189 tol=1.69
2024-12-08 21:08:20,247 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=63.6 pTM=0.406 ipTM=0.187 tol=2.84
2024-12-08 21:08:41,906 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=63.6 pTM=0.411 ipTM=0.189 tol=3.52
2024-12-08 21:09:03,551 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=64 pTM=0.407 ipTM=0.186 tol=2.04
2024-12-08 21:09:25,216 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=63.6 pTM=0.404 ipTM=0.185 tol=3.78
2024-12-08 21:09:46,875 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64.1 pTM=0.404 ipTM=0.186 tol=4
2024-12-08 21:10:08,536 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=63.2 pTM=0.405 ipTM=0.187 tol=2.63
2024-12-08 21:10:30,190 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=63.6 pTM=0.402 ipTM=0.181 tol=2.39
2024-12-08 21:10:51,852 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=63.4 pTM=0.403 ipTM=0.18 tol=1.72
2024-12-08 21:11:13,497 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=63.4 pTM=0.402 ipTM=0.181 tol=1.59
2024-12-08 21:11:35,159 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=62.9 pTM=0.405 ipTM=0.188 tol=2.16
2024-12-08 21:11:56,810 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=63.5 pTM=0.403 ipTM=0.185 tol=1.77
2024-12-08 21:12:18,449 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=63.5 pTM=0.408 ipTM=0.188 tol=2.52
2024-12-08 21:12:40,104 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=63.7 pTM=0.404 ipTM=0.186 tol=2.67
2024-12-08 21:13:01,767 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=63.7 pTM=0.404 ipTM=0.183 tol=2.65
2024-12-08 21:13:23,421 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=63.9 pTM=0.405 ipTM=0.184 tol=2.31
2024-12-08 21:13:45,056 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=63.7 pTM=0.406 ipTM=0.185 tol=3.05
2024-12-08 21:13:45,057 alphafold2_multimer_v3_model_4_seed_000 took 671.6s (30 recycles)
2024-12-08 21:14:07,278 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=58 pTM=0.365 ipTM=0.152
2024-12-08 21:14:29,029 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=63.9 pTM=0.368 ipTM=0.14 tol=30
2024-12-08 21:14:50,760 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=65 pTM=0.386 ipTM=0.145 tol=5.61
2024-12-08 21:15:12,481 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=65.4 pTM=0.39 ipTM=0.148 tol=6.61
2024-12-08 21:15:34,187 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=65.8 pTM=0.397 ipTM=0.158 tol=6.49
2024-12-08 21:15:55,888 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=65.8 pTM=0.396 ipTM=0.154 tol=6.41
2024-12-08 21:16:17,589 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=66.1 pTM=0.398 ipTM=0.159 tol=4.9
2024-12-08 21:16:39,295 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=66.1 pTM=0.396 ipTM=0.156 tol=7.25
2024-12-08 21:17:01,016 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=66.1 pTM=0.397 ipTM=0.156 tol=4.52
2024-12-08 21:17:22,730 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=65.8 pTM=0.398 ipTM=0.156 tol=5.61
2024-12-08 21:17:44,442 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=65.9 pTM=0.4 ipTM=0.159 tol=5.09
2024-12-08 21:18:06,155 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=65.8 pTM=0.4 ipTM=0.161 tol=6.27
2024-12-08 21:18:27,858 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=65.7 pTM=0.401 ipTM=0.161 tol=2.62
2024-12-08 21:18:49,575 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=65.9 pTM=0.4 ipTM=0.158 tol=4.2
2024-12-08 21:19:11,302 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=65.8 pTM=0.401 ipTM=0.16 tol=4.77
2024-12-08 21:19:33,023 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=65.6 pTM=0.4 ipTM=0.16 tol=4.27
2024-12-08 21:19:54,747 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=65.8 pTM=0.402 ipTM=0.162 tol=4.32
2024-12-08 21:20:16,476 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=65.8 pTM=0.403 ipTM=0.162 tol=3.91
2024-12-08 21:20:38,182 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=65.7 pTM=0.403 ipTM=0.163 tol=4.01
2024-12-08 21:20:59,881 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=65.8 pTM=0.404 ipTM=0.163 tol=3.53
2024-12-08 21:21:21,575 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=65.5 pTM=0.405 ipTM=0.167 tol=1.89
2024-12-08 21:21:43,266 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=65.4 pTM=0.4 ipTM=0.158 tol=1.48
2024-12-08 21:22:04,973 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=65.6 pTM=0.401 ipTM=0.16 tol=4.97
2024-12-08 21:22:26,663 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=65.2 pTM=0.403 ipTM=0.165 tol=5.36
2024-12-08 21:22:48,375 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=65.2 pTM=0.406 ipTM=0.17 tol=2.53
2024-12-08 21:23:10,093 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=65.1 pTM=0.402 ipTM=0.165 tol=3.37
2024-12-08 21:23:31,834 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=65.7 pTM=0.406 ipTM=0.167 tol=2.64
2024-12-08 21:23:53,526 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=65.2 pTM=0.405 ipTM=0.169 tol=4.04
2024-12-08 21:24:15,216 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=65.6 pTM=0.404 ipTM=0.168 tol=3.97
2024-12-08 21:24:36,913 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=65.3 pTM=0.406 ipTM=0.167 tol=3.55
2024-12-08 21:24:58,633 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=65.4 pTM=0.406 ipTM=0.168 tol=3.26
2024-12-08 21:24:58,634 alphafold2_multimer_v3_model_5_seed_000 took 673.0s (30 recycles)
2024-12-08 21:24:59,220 reranking models by 'multimer' metric
2024-12-08 21:25:00,514 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 21:26:13,531 Relaxation took 74.3s
2024-12-08 21:26:13,531 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=67.2 pTM=0.404 ipTM=0.289
2024-12-08 21:27:34,226 Relaxation took 80.7s
2024-12-08 21:27:34,226 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=63.7 pTM=0.406 ipTM=0.185
2024-12-08 21:28:50,527 Relaxation took 76.3s
2024-12-08 21:28:50,527 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=65.4 pTM=0.406 ipTM=0.168
2024-12-08 21:30:10,865 Relaxation took 80.3s
2024-12-08 21:30:10,865 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=65.1 pTM=0.395 ipTM=0.17
2024-12-08 21:40:10,595 Relaxation took 599.7s
2024-12-08 21:40:10,595 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=66.9 pTM=0.399 ipTM=0.164
2024-12-08 21:40:12,697 Done