2024-12-08 20:37:36,701 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 20:37:37,015 Running on GPU
2024-12-08 20:37:40,294 Found 6 citations for tools or databases
2024-12-08 20:37:40,294 Query 1/1: TRIM11_FAM9C (length 634)
2024-12-08 20:37:40,568 Sleeping for 8s. Reason: PENDING
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2024-12-08 20:38:59,128 Sleeping for 10s. Reason: RUNNING
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2024-12-08 20:40:10,465 Sleeping for 10s. Reason: RUNNING
2024-12-08 20:40:22,396 Sleeping for 9s. Reason: PENDING
2024-12-08 20:40:31,659 Sleeping for 5s. Reason: RUNNING
2024-12-08 20:40:36,917 Sleeping for 10s. Reason: RUNNING
2024-12-08 20:40:47,174 Sleeping for 6s. Reason: RUNNING
2024-12-08 20:40:53,427 Sleeping for 8s. Reason: RUNNING
2024-12-08 20:41:01,697 Sleeping for 7s. Reason: RUNNING
2024-12-08 20:41:08,948 Sleeping for 7s. Reason: RUNNING
2024-12-08 20:41:16,204 Sleeping for 5s. Reason: RUNNING
2024-12-08 20:41:21,462 Sleeping for 7s. Reason: RUNNING
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2024-12-08 20:41:34,972 Sleeping for 10s. Reason: RUNNING
2024-12-08 20:41:47,380 Setting max_seq=508, max_extra_seq=1630
2024-12-08 20:44:25,351 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=58.7 pTM=0.35 ipTM=0.102
2024-12-08 20:44:33,459 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=58.4 pTM=0.385 ipTM=0.128 tol=17.9
2024-12-08 20:44:41,563 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=64.6 pTM=0.474 ipTM=0.175 tol=27.7
2024-12-08 20:44:49,678 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=65.9 pTM=0.499 ipTM=0.183 tol=2.63
2024-12-08 20:44:57,808 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=66.2 pTM=0.505 ipTM=0.162 tol=3.07
2024-12-08 20:45:05,933 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=66.5 pTM=0.51 ipTM=0.171 tol=6.25
2024-12-08 20:45:14,074 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=66.6 pTM=0.511 ipTM=0.167 tol=2.03
2024-12-08 20:45:22,222 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=66.5 pTM=0.511 ipTM=0.167 tol=1.67
2024-12-08 20:45:30,373 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=66.6 pTM=0.513 ipTM=0.163 tol=1.55
2024-12-08 20:45:38,527 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=66.5 pTM=0.514 ipTM=0.171 tol=1.32
2024-12-08 20:45:46,690 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=66.4 pTM=0.513 ipTM=0.166 tol=1.14
2024-12-08 20:45:54,852 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=66.4 pTM=0.512 ipTM=0.168 tol=1.78
2024-12-08 20:46:03,027 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=66.4 pTM=0.508 ipTM=0.157 tol=1.38
2024-12-08 20:46:11,204 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=66.1 pTM=0.506 ipTM=0.165 tol=1.41
2024-12-08 20:46:19,371 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=66.1 pTM=0.508 ipTM=0.162 tol=2.61
2024-12-08 20:46:27,550 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=66.3 pTM=0.51 ipTM=0.162 tol=1.1
2024-12-08 20:46:35,734 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=66.2 pTM=0.509 ipTM=0.16 tol=1.2
2024-12-08 20:46:43,916 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=66.2 pTM=0.51 ipTM=0.163 tol=1.78
2024-12-08 20:46:52,098 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=66 pTM=0.505 ipTM=0.158 tol=1.27
2024-12-08 20:47:00,280 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=66.2 pTM=0.509 ipTM=0.158 tol=2.03
2024-12-08 20:47:08,470 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=65.9 pTM=0.506 ipTM=0.163 tol=2.32
2024-12-08 20:47:16,660 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=66.1 pTM=0.506 ipTM=0.161 tol=2.94
2024-12-08 20:47:24,851 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=66.1 pTM=0.507 ipTM=0.165 tol=1.95
2024-12-08 20:47:33,041 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=66.2 pTM=0.507 ipTM=0.158 tol=1.39
2024-12-08 20:47:41,229 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=65.9 pTM=0.502 ipTM=0.157 tol=1.13
2024-12-08 20:47:49,429 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=66.1 pTM=0.507 ipTM=0.161 tol=1.34
2024-12-08 20:47:57,623 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=66.2 pTM=0.509 ipTM=0.161 tol=1.03
2024-12-08 20:48:05,818 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=66.1 pTM=0.507 ipTM=0.16 tol=1.4
2024-12-08 20:48:14,012 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=66.3 pTM=0.511 ipTM=0.162 tol=1.1
2024-12-08 20:48:22,204 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66.2 pTM=0.508 ipTM=0.16 tol=1.23
2024-12-08 20:48:30,398 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=66.1 pTM=0.508 ipTM=0.161 tol=1.42
2024-12-08 20:48:30,399 alphafold2_multimer_v3_model_1_seed_000 took 398.0s (30 recycles)
2024-12-08 20:48:38,851 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=64.1 pTM=0.451 ipTM=0.155
2024-12-08 20:48:47,042 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=66.6 pTM=0.517 ipTM=0.185 tol=18
2024-12-08 20:48:55,238 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.1 pTM=0.515 ipTM=0.173 tol=6.54
2024-12-08 20:49:03,433 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=66.2 pTM=0.511 ipTM=0.178 tol=1.27
2024-12-08 20:49:11,628 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=66.1 pTM=0.513 ipTM=0.169 tol=2.62
2024-12-08 20:49:19,821 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=66 pTM=0.51 ipTM=0.169 tol=1.94
2024-12-08 20:49:28,013 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=65.6 pTM=0.508 ipTM=0.158 tol=2.14
2024-12-08 20:49:36,208 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=65.6 pTM=0.507 ipTM=0.163 tol=1.31
2024-12-08 20:49:44,408 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=65.8 pTM=0.511 ipTM=0.161 tol=3.18
2024-12-08 20:49:52,605 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=65.7 pTM=0.509 ipTM=0.162 tol=1.53
2024-12-08 20:50:00,808 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=65.8 pTM=0.511 ipTM=0.162 tol=1.27
2024-12-08 20:50:08,996 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=65.8 pTM=0.51 ipTM=0.155 tol=1.37
2024-12-08 20:50:17,191 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=65.7 pTM=0.509 ipTM=0.159 tol=1.56
2024-12-08 20:50:25,382 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=65.9 pTM=0.508 ipTM=0.159 tol=0.662
2024-12-08 20:50:33,577 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=65.6 pTM=0.507 ipTM=0.157 tol=0.987
2024-12-08 20:50:41,770 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=65.9 pTM=0.508 ipTM=0.156 tol=1.59
2024-12-08 20:50:49,961 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=65.8 pTM=0.507 ipTM=0.158 tol=2.11
2024-12-08 20:50:58,161 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=65.9 pTM=0.513 ipTM=0.165 tol=2.65
2024-12-08 20:51:06,356 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=65.7 pTM=0.506 ipTM=0.154 tol=1.82
2024-12-08 20:51:14,546 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=66.1 pTM=0.511 ipTM=0.164 tol=1.64
2024-12-08 20:51:22,734 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=66.1 pTM=0.508 ipTM=0.164 tol=1.69
2024-12-08 20:51:30,928 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=65.9 pTM=0.508 ipTM=0.161 tol=1.09
2024-12-08 20:51:39,123 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=66.2 pTM=0.507 ipTM=0.165 tol=1.48
2024-12-08 20:51:47,308 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=66 pTM=0.506 ipTM=0.152 tol=3.43
2024-12-08 20:51:55,502 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=66.1 pTM=0.507 ipTM=0.163 tol=2.88
2024-12-08 20:52:03,698 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=66 pTM=0.507 ipTM=0.158 tol=2.06
2024-12-08 20:52:11,889 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=65.8 pTM=0.506 ipTM=0.16 tol=1.33
2024-12-08 20:52:20,082 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=66.1 pTM=0.508 ipTM=0.162 tol=1.42
2024-12-08 20:52:28,285 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=66.1 pTM=0.508 ipTM=0.163 tol=1.76
2024-12-08 20:52:36,479 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=66.1 pTM=0.505 ipTM=0.16 tol=1.2
2024-12-08 20:52:44,669 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=65.9 pTM=0.506 ipTM=0.161 tol=1.92
2024-12-08 20:52:44,670 alphafold2_multimer_v3_model_2_seed_000 took 254.0s (30 recycles)
2024-12-08 20:52:53,167 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=60.1 pTM=0.368 ipTM=0.119
2024-12-08 20:53:01,361 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.3 pTM=0.495 ipTM=0.196 tol=20.3
2024-12-08 20:53:09,565 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=67.3 pTM=0.517 ipTM=0.182 tol=8.85
2024-12-08 20:53:17,753 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=66.4 pTM=0.513 ipTM=0.184 tol=13.1
2024-12-08 20:53:25,935 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=67.2 pTM=0.521 ipTM=0.221 tol=2.9
2024-12-08 20:53:34,122 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=67.2 pTM=0.52 ipTM=0.229 tol=3.51
2024-12-08 20:53:42,311 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=67.1 pTM=0.518 ipTM=0.229 tol=1.61
2024-12-08 20:53:50,490 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=67.2 pTM=0.521 ipTM=0.236 tol=1.31
2024-12-08 20:53:58,674 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=67.2 pTM=0.521 ipTM=0.239 tol=2.41
2024-12-08 20:54:06,853 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=67.2 pTM=0.521 ipTM=0.235 tol=1.48
2024-12-08 20:54:15,034 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=67.4 pTM=0.522 ipTM=0.238 tol=0.87
2024-12-08 20:54:23,215 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=67.3 pTM=0.52 ipTM=0.242 tol=1.04
2024-12-08 20:54:31,397 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=67.1 pTM=0.52 ipTM=0.24 tol=0.985
2024-12-08 20:54:39,579 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=67.3 pTM=0.519 ipTM=0.242 tol=1.27
2024-12-08 20:54:47,765 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=67.2 pTM=0.519 ipTM=0.254 tol=1.34
2024-12-08 20:54:55,944 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=67.4 pTM=0.523 ipTM=0.265 tol=1.54
2024-12-08 20:55:04,125 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=67.1 pTM=0.519 ipTM=0.254 tol=1.8
2024-12-08 20:55:12,305 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=67.8 pTM=0.527 ipTM=0.274 tol=1.02
2024-12-08 20:55:20,482 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=67.1 pTM=0.522 ipTM=0.262 tol=1.48
2024-12-08 20:55:28,664 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=67.6 pTM=0.523 ipTM=0.263 tol=0.949
2024-12-08 20:55:36,845 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=66.9 pTM=0.521 ipTM=0.257 tol=0.849
2024-12-08 20:55:45,022 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.3 pTM=0.521 ipTM=0.265 tol=1.09
2024-12-08 20:55:53,206 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=66.8 pTM=0.52 ipTM=0.25 tol=1.33
2024-12-08 20:56:01,388 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.4 pTM=0.523 ipTM=0.27 tol=0.803
2024-12-08 20:56:09,559 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=66.6 pTM=0.52 ipTM=0.258 tol=0.851
2024-12-08 20:56:17,742 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67.2 pTM=0.522 ipTM=0.271 tol=1.06
2024-12-08 20:56:25,918 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=66.7 pTM=0.522 ipTM=0.266 tol=0.967
2024-12-08 20:56:34,104 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.1 pTM=0.521 ipTM=0.269 tol=1.1
2024-12-08 20:56:42,293 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=66.8 pTM=0.523 ipTM=0.26 tol=1.15
2024-12-08 20:56:50,484 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.2 pTM=0.522 ipTM=0.278 tol=0.832
2024-12-08 20:56:58,675 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=66 pTM=0.517 ipTM=0.25 tol=1.07
2024-12-08 20:56:58,675 alphafold2_multimer_v3_model_3_seed_000 took 253.7s (30 recycles)
2024-12-08 20:57:07,105 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=61.3 pTM=0.464 ipTM=0.246
2024-12-08 20:57:15,281 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=57.8 pTM=0.405 ipTM=0.167 tol=12.4
2024-12-08 20:57:23,497 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=56.1 pTM=0.383 ipTM=0.117 tol=24
2024-12-08 20:57:31,693 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=62.6 pTM=0.427 ipTM=0.181 tol=26.4
2024-12-08 20:57:39,876 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=66.4 pTM=0.48 ipTM=0.237 tol=8.45
2024-12-08 20:57:48,052 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=66.8 pTM=0.495 ipTM=0.234 tol=4.91
2024-12-08 20:57:56,229 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=66.4 pTM=0.501 ipTM=0.219 tol=5.44
2024-12-08 20:58:04,411 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=66.4 pTM=0.507 ipTM=0.226 tol=2.55
2024-12-08 20:58:12,592 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=66.9 pTM=0.507 ipTM=0.231 tol=2.04
2024-12-08 20:58:20,774 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=66.6 pTM=0.507 ipTM=0.225 tol=1.25
2024-12-08 20:58:28,958 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=66.8 pTM=0.509 ipTM=0.233 tol=1.45
2024-12-08 20:58:37,144 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=66.8 pTM=0.509 ipTM=0.233 tol=1.72
2024-12-08 20:58:45,327 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=66.2 pTM=0.507 ipTM=0.23 tol=1.03
2024-12-08 20:58:53,505 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=66.1 pTM=0.504 ipTM=0.23 tol=1.28
2024-12-08 20:59:01,688 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=65.9 pTM=0.504 ipTM=0.23 tol=1.48
2024-12-08 20:59:09,868 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=66.1 pTM=0.505 ipTM=0.244 tol=1.67
2024-12-08 20:59:18,043 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=66.1 pTM=0.503 ipTM=0.232 tol=1.4
2024-12-08 20:59:26,219 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=66.9 pTM=0.511 ipTM=0.255 tol=1.74
2024-12-08 20:59:34,397 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=66.3 pTM=0.505 ipTM=0.245 tol=1.62
2024-12-08 20:59:42,578 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=66.6 pTM=0.51 ipTM=0.245 tol=1.06
2024-12-08 20:59:50,760 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=66 pTM=0.504 ipTM=0.237 tol=1.51
2024-12-08 20:59:58,941 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=66.4 pTM=0.508 ipTM=0.248 tol=0.873
2024-12-08 21:00:07,123 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=66.4 pTM=0.506 ipTM=0.239 tol=1.11
2024-12-08 21:00:15,303 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=66.3 pTM=0.507 ipTM=0.244 tol=1.39
2024-12-08 21:00:23,484 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=65.9 pTM=0.502 ipTM=0.241 tol=1.4
2024-12-08 21:00:31,665 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=66.2 pTM=0.505 ipTM=0.246 tol=0.866
2024-12-08 21:00:39,849 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=66.1 pTM=0.504 ipTM=0.234 tol=0.79
2024-12-08 21:00:48,030 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=66.1 pTM=0.503 ipTM=0.234 tol=1.27
2024-12-08 21:00:56,216 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=66.5 pTM=0.511 ipTM=0.243 tol=1.24
2024-12-08 21:01:04,398 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=66.1 pTM=0.505 ipTM=0.237 tol=1.27
2024-12-08 21:01:12,577 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=66.1 pTM=0.505 ipTM=0.234 tol=1.05
2024-12-08 21:01:12,578 alphafold2_multimer_v3_model_4_seed_000 took 253.6s (30 recycles)
2024-12-08 21:01:21,039 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=64.4 pTM=0.464 ipTM=0.209
2024-12-08 21:01:29,229 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=65.2 pTM=0.519 ipTM=0.247 tol=11.3
2024-12-08 21:01:37,414 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=65.8 pTM=0.521 ipTM=0.244 tol=8.46
2024-12-08 21:01:45,598 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=66.1 pTM=0.514 ipTM=0.226 tol=2.62
2024-12-08 21:01:53,776 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=65.9 pTM=0.514 ipTM=0.206 tol=1.48
2024-12-08 21:02:01,974 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=66.4 pTM=0.513 ipTM=0.229 tol=1.3
2024-12-08 21:02:10,156 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=65.6 pTM=0.512 ipTM=0.208 tol=1.57
2024-12-08 21:02:18,324 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=66.2 pTM=0.517 ipTM=0.232 tol=0.971
2024-12-08 21:02:26,494 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=65.5 pTM=0.513 ipTM=0.207 tol=0.918
2024-12-08 21:02:34,668 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=65.9 pTM=0.517 ipTM=0.225 tol=0.699
2024-12-08 21:02:42,845 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=65.7 pTM=0.516 ipTM=0.209 tol=0.744
2024-12-08 21:02:51,020 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=66.1 pTM=0.518 ipTM=0.224 tol=0.921
2024-12-08 21:02:59,199 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=65.3 pTM=0.515 ipTM=0.212 tol=1.36
2024-12-08 21:03:07,372 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=65.9 pTM=0.518 ipTM=0.235 tol=1.28
2024-12-08 21:03:15,544 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=65.1 pTM=0.511 ipTM=0.209 tol=1.26
2024-12-08 21:03:23,711 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=65.8 pTM=0.516 ipTM=0.234 tol=1.2
2024-12-08 21:03:31,886 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=65.3 pTM=0.512 ipTM=0.215 tol=0.789
2024-12-08 21:03:40,056 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=66 pTM=0.516 ipTM=0.235 tol=1.46
2024-12-08 21:03:48,226 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=65.8 pTM=0.517 ipTM=0.238 tol=0.854
2024-12-08 21:03:56,397 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=65.9 pTM=0.519 ipTM=0.237 tol=0.743
2024-12-08 21:04:04,567 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=65.7 pTM=0.516 ipTM=0.233 tol=0.893
2024-12-08 21:04:12,737 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=65.9 pTM=0.519 ipTM=0.234 tol=0.541
2024-12-08 21:04:20,910 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=65.8 pTM=0.518 ipTM=0.234 tol=1.19
2024-12-08 21:04:29,091 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=65.9 pTM=0.52 ipTM=0.23 tol=0.546
2024-12-08 21:04:37,268 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=65.7 pTM=0.517 ipTM=0.234 tol=0.646
2024-12-08 21:04:45,450 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=65.5 pTM=0.516 ipTM=0.222 tol=0.715
2024-12-08 21:04:53,630 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=65.6 pTM=0.515 ipTM=0.225 tol=0.872
2024-12-08 21:05:01,810 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=65.2 pTM=0.513 ipTM=0.214 tol=0.999
2024-12-08 21:05:09,990 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=66.2 pTM=0.519 ipTM=0.235 tol=1.9
2024-12-08 21:05:18,172 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=65.3 pTM=0.509 ipTM=0.221 tol=1.19
2024-12-08 21:05:26,346 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=65.7 pTM=0.514 ipTM=0.235 tol=1.1
2024-12-08 21:05:26,347 alphafold2_multimer_v3_model_5_seed_000 took 253.5s (30 recycles)
2024-12-08 21:05:26,615 reranking models by 'multimer' metric
2024-12-08 21:05:27,436 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 21:06:02,369 Relaxation took 35.8s
2024-12-08 21:06:02,369 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=66 pTM=0.517 ipTM=0.25
2024-12-08 21:06:42,530 Relaxation took 40.2s
2024-12-08 21:06:42,530 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=65.7 pTM=0.514 ipTM=0.235
2024-12-08 21:07:14,813 Relaxation took 32.3s
2024-12-08 21:07:14,813 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=66.1 pTM=0.505 ipTM=0.234
2024-12-08 21:07:51,152 Relaxation took 36.3s
2024-12-08 21:07:51,152 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=66.1 pTM=0.508 ipTM=0.161
2024-12-08 21:08:25,723 Relaxation took 34.6s
2024-12-08 21:08:25,723 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=65.9 pTM=0.506 ipTM=0.161
2024-12-08 21:08:26,936 Done