2024-12-08 20:39:43,843 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 20:39:44,192 Running on GPU
2024-12-08 20:39:45,166 Found 6 citations for tools or databases
2024-12-08 20:39:45,166 Query 1/1: TRIM11_PRKAB1 (length 738)
2024-12-08 20:39:45,434 Sleeping for 5s. Reason: PENDING
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2024-12-08 20:42:39,012 Sleeping for 5s. Reason: PENDING
2024-12-08 20:42:44,265 Sleeping for 7s. Reason: RUNNING
2024-12-08 20:42:51,523 Sleeping for 7s. Reason: RUNNING
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2024-12-08 20:43:09,055 Sleeping for 10s. Reason: RUNNING
2024-12-08 20:43:19,319 Sleeping for 6s. Reason: RUNNING
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2024-12-08 20:43:45,099 Sleeping for 6s. Reason: RUNNING
2024-12-08 20:43:51,357 Sleeping for 5s. Reason: RUNNING
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2024-12-08 20:44:05,876 Sleeping for 9s. Reason: RUNNING
2024-12-08 20:44:19,056 Setting max_seq=508, max_extra_seq=2048
2024-12-08 20:47:41,688 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=65.8 pTM=0.339 ipTM=0.135
2024-12-08 20:47:55,870 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=65.8 pTM=0.435 ipTM=0.178 tol=39.6
2024-12-08 20:48:10,045 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=67.1 pTM=0.461 ipTM=0.183 tol=5.45
2024-12-08 20:48:24,236 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=67.6 pTM=0.465 ipTM=0.181 tol=2.63
2024-12-08 20:48:38,463 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=67.7 pTM=0.469 ipTM=0.174 tol=2.82
2024-12-08 20:48:52,675 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=67.2 pTM=0.466 ipTM=0.174 tol=3.19
2024-12-08 20:49:06,895 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=67.2 pTM=0.469 ipTM=0.176 tol=1.72
2024-12-08 20:49:21,148 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=67.3 pTM=0.468 ipTM=0.173 tol=1.63
2024-12-08 20:49:35,394 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=67.2 pTM=0.471 ipTM=0.175 tol=1.8
2024-12-08 20:49:49,618 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=67.1 pTM=0.47 ipTM=0.177 tol=1.88
2024-12-08 20:50:03,849 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=67.1 pTM=0.472 ipTM=0.178 tol=2.21
2024-12-08 20:50:18,076 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=66.9 pTM=0.472 ipTM=0.179 tol=2.4
2024-12-08 20:50:32,310 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=67.2 pTM=0.472 ipTM=0.179 tol=1.96
2024-12-08 20:50:46,555 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67.1 pTM=0.471 ipTM=0.178 tol=1.99
2024-12-08 20:51:00,812 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=67 pTM=0.471 ipTM=0.179 tol=1.37
2024-12-08 20:51:15,062 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=67 pTM=0.468 ipTM=0.174 tol=0.992
2024-12-08 20:51:29,326 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=67.2 pTM=0.472 ipTM=0.176 tol=2.7
2024-12-08 20:51:43,580 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=67.1 pTM=0.47 ipTM=0.176 tol=1.85
2024-12-08 20:51:57,844 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=67.3 pTM=0.472 ipTM=0.177 tol=2.31
2024-12-08 20:52:12,101 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=67.1 pTM=0.469 ipTM=0.176 tol=1.74
2024-12-08 20:52:26,366 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=67 pTM=0.47 ipTM=0.178 tol=2.75
2024-12-08 20:52:40,638 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=66.9 pTM=0.468 ipTM=0.177 tol=1.4
2024-12-08 20:52:54,907 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=67.2 pTM=0.471 ipTM=0.178 tol=1.72
2024-12-08 20:53:09,173 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=67.1 pTM=0.472 ipTM=0.175 tol=2.62
2024-12-08 20:53:23,448 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=67.1 pTM=0.47 ipTM=0.175 tol=1.29
2024-12-08 20:53:37,718 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=67 pTM=0.469 ipTM=0.177 tol=1.79
2024-12-08 20:53:51,994 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=67.1 pTM=0.468 ipTM=0.176 tol=2.09
2024-12-08 20:54:06,262 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=67 pTM=0.468 ipTM=0.174 tol=2.77
2024-12-08 20:54:20,558 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=67.1 pTM=0.468 ipTM=0.174 tol=1.16
2024-12-08 20:54:34,851 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66.9 pTM=0.47 ipTM=0.175 tol=1.6
2024-12-08 20:54:49,130 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=67.1 pTM=0.47 ipTM=0.173 tol=2.06
2024-12-08 20:54:49,131 alphafold2_multimer_v3_model_1_seed_000 took 623.9s (30 recycles)
2024-12-08 20:55:03,866 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=66.6 pTM=0.469 ipTM=0.189
2024-12-08 20:55:18,155 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=67 pTM=0.482 ipTM=0.183 tol=6.36
2024-12-08 20:55:32,455 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=67 pTM=0.482 ipTM=0.186 tol=3.39
2024-12-08 20:55:46,757 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=67.2 pTM=0.476 ipTM=0.178 tol=2.13
2024-12-08 20:56:01,052 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67.2 pTM=0.479 ipTM=0.181 tol=1.58
2024-12-08 20:56:15,358 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=67 pTM=0.474 ipTM=0.175 tol=1.88
2024-12-08 20:56:29,651 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=67.3 pTM=0.475 ipTM=0.177 tol=1.55
2024-12-08 20:56:43,955 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=67.3 pTM=0.473 ipTM=0.174 tol=1.75
2024-12-08 20:56:58,254 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=67.2 pTM=0.476 ipTM=0.177 tol=2.06
2024-12-08 20:57:12,560 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=67.4 pTM=0.475 ipTM=0.176 tol=3.95
2024-12-08 20:57:26,856 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=67.4 pTM=0.477 ipTM=0.178 tol=3.96
2024-12-08 20:57:41,165 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=67.2 pTM=0.475 ipTM=0.18 tol=2.34
2024-12-08 20:57:55,465 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=67.4 pTM=0.476 ipTM=0.179 tol=1.27
2024-12-08 20:58:09,769 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=67.3 pTM=0.474 ipTM=0.175 tol=1.64
2024-12-08 20:58:24,071 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=67.2 pTM=0.473 ipTM=0.174 tol=1.24
2024-12-08 20:58:38,373 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=67.3 pTM=0.473 ipTM=0.174 tol=1.23
2024-12-08 20:58:52,673 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=67.4 pTM=0.476 ipTM=0.174 tol=2.02
2024-12-08 20:59:06,968 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=67.2 pTM=0.474 ipTM=0.175 tol=1.5
2024-12-08 20:59:21,263 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=67.4 pTM=0.474 ipTM=0.173 tol=1.02
2024-12-08 20:59:35,563 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=67.2 pTM=0.475 ipTM=0.176 tol=1.26
2024-12-08 20:59:49,857 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=67.1 pTM=0.474 ipTM=0.174 tol=1.46
2024-12-08 21:00:04,156 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=67.2 pTM=0.475 ipTM=0.175 tol=1.01
2024-12-08 21:00:18,449 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=67.3 pTM=0.476 ipTM=0.176 tol=1.2
2024-12-08 21:00:32,749 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=67.3 pTM=0.475 ipTM=0.174 tol=1.23
2024-12-08 21:00:47,042 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=67.4 pTM=0.473 ipTM=0.171 tol=1.58
2024-12-08 21:01:01,335 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=67.2 pTM=0.473 ipTM=0.175 tol=1.36
2024-12-08 21:01:15,628 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=67.2 pTM=0.472 ipTM=0.173 tol=1.38
2024-12-08 21:01:29,921 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=67.2 pTM=0.473 ipTM=0.172 tol=1.95
2024-12-08 21:01:44,223 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=67.4 pTM=0.473 ipTM=0.169 tol=2.77
2024-12-08 21:01:58,517 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=67.4 pTM=0.474 ipTM=0.17 tol=2.23
2024-12-08 21:02:12,807 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=67.3 pTM=0.474 ipTM=0.174 tol=2.44
2024-12-08 21:02:12,808 alphafold2_multimer_v3_model_2_seed_000 took 443.2s (30 recycles)
2024-12-08 21:02:27,602 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=61.2 pTM=0.339 ipTM=0.153
2024-12-08 21:02:41,892 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.2 pTM=0.458 ipTM=0.181 tol=22.8
2024-12-08 21:02:56,185 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=67.1 pTM=0.48 ipTM=0.181 tol=5.43
2024-12-08 21:03:10,498 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=67.7 pTM=0.474 ipTM=0.174 tol=4.68
2024-12-08 21:03:24,796 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=66.8 pTM=0.475 ipTM=0.175 tol=4.17
2024-12-08 21:03:39,088 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=66.6 pTM=0.474 ipTM=0.178 tol=2.73
2024-12-08 21:03:53,383 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=66.6 pTM=0.476 ipTM=0.18 tol=1.79
2024-12-08 21:04:07,690 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=66.4 pTM=0.475 ipTM=0.179 tol=1.62
2024-12-08 21:04:21,976 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=66.3 pTM=0.477 ipTM=0.18 tol=1.35
2024-12-08 21:04:36,271 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=66.6 pTM=0.475 ipTM=0.178 tol=1.48
2024-12-08 21:04:50,565 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=66.1 pTM=0.475 ipTM=0.18 tol=1.7
2024-12-08 21:05:04,861 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=66.3 pTM=0.477 ipTM=0.181 tol=1.62
2024-12-08 21:05:19,164 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=66.2 pTM=0.474 ipTM=0.18 tol=2.16
2024-12-08 21:05:33,465 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=66.2 pTM=0.474 ipTM=0.18 tol=1.13
2024-12-08 21:05:47,781 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=66.1 pTM=0.474 ipTM=0.181 tol=1.62
2024-12-08 21:06:02,095 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=66.4 pTM=0.473 ipTM=0.178 tol=1.83
2024-12-08 21:06:16,391 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=66.4 pTM=0.475 ipTM=0.179 tol=1.95
2024-12-08 21:06:30,681 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=66.3 pTM=0.474 ipTM=0.182 tol=1.69
2024-12-08 21:06:44,973 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=66.3 pTM=0.476 ipTM=0.181 tol=1.53
2024-12-08 21:06:59,246 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=66.2 pTM=0.476 ipTM=0.183 tol=2.18
2024-12-08 21:07:13,527 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=66.2 pTM=0.476 ipTM=0.18 tol=1.77
2024-12-08 21:07:27,804 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=66.4 pTM=0.473 ipTM=0.177 tol=1.63
2024-12-08 21:07:42,085 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=66.4 pTM=0.473 ipTM=0.177 tol=1.56
2024-12-08 21:07:56,355 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=66.2 pTM=0.477 ipTM=0.182 tol=1.69
2024-12-08 21:08:10,633 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=66.2 pTM=0.478 ipTM=0.182 tol=1.27
2024-12-08 21:08:24,911 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=66.5 pTM=0.474 ipTM=0.181 tol=1.99
2024-12-08 21:08:39,185 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=66.5 pTM=0.474 ipTM=0.179 tol=1.55
2024-12-08 21:08:53,452 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=66.5 pTM=0.478 ipTM=0.184 tol=1.38
2024-12-08 21:09:07,724 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=66.6 pTM=0.477 ipTM=0.184 tol=1.79
2024-12-08 21:09:21,998 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=66.4 pTM=0.475 ipTM=0.179 tol=1.86
2024-12-08 21:09:36,266 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=66.4 pTM=0.476 ipTM=0.181 tol=1.44
2024-12-08 21:09:36,267 alphafold2_multimer_v3_model_3_seed_000 took 443.0s (30 recycles)
2024-12-08 21:09:50,955 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=59 pTM=0.388 ipTM=0.175
2024-12-08 21:10:05,233 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=63.7 pTM=0.41 ipTM=0.168 tol=34.8
2024-12-08 21:10:19,497 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65.9 pTM=0.447 ipTM=0.17 tol=4.87
2024-12-08 21:10:33,769 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=66.3 pTM=0.466 ipTM=0.172 tol=4.11
2024-12-08 21:10:48,025 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=66.4 pTM=0.475 ipTM=0.177 tol=3.2
2024-12-08 21:11:02,288 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=66.2 pTM=0.475 ipTM=0.179 tol=2.15
2024-12-08 21:11:16,533 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=66.4 pTM=0.475 ipTM=0.179 tol=2.53
2024-12-08 21:11:30,797 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=66.4 pTM=0.474 ipTM=0.174 tol=4.31
2024-12-08 21:11:45,070 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=66.4 pTM=0.476 ipTM=0.175 tol=2.42
2024-12-08 21:11:59,319 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=66.5 pTM=0.476 ipTM=0.176 tol=3.05
2024-12-08 21:12:13,578 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=66.1 pTM=0.474 ipTM=0.176 tol=4.03
2024-12-08 21:12:27,840 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=66.1 pTM=0.475 ipTM=0.177 tol=3.87
2024-12-08 21:12:42,097 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=66.2 pTM=0.472 ipTM=0.173 tol=4.93
2024-12-08 21:12:56,363 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=66.3 pTM=0.474 ipTM=0.175 tol=2.45
2024-12-08 21:13:10,642 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=66.4 pTM=0.473 ipTM=0.169 tol=1.64
2024-12-08 21:13:24,911 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=66.4 pTM=0.47 ipTM=0.167 tol=1.38
2024-12-08 21:13:39,176 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=66.4 pTM=0.471 ipTM=0.168 tol=2.54
2024-12-08 21:13:53,444 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=66.6 pTM=0.474 ipTM=0.173 tol=1.46
2024-12-08 21:14:07,712 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=66.6 pTM=0.471 ipTM=0.168 tol=1.1
2024-12-08 21:14:21,974 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=66.5 pTM=0.47 ipTM=0.17 tol=1.69
2024-12-08 21:14:36,230 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=66.3 pTM=0.47 ipTM=0.169 tol=1.27
2024-12-08 21:14:50,489 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=66.4 pTM=0.473 ipTM=0.173 tol=1.2
2024-12-08 21:15:04,746 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=66.4 pTM=0.474 ipTM=0.174 tol=1.9
2024-12-08 21:15:19,005 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=66.8 pTM=0.473 ipTM=0.17 tol=2.24
2024-12-08 21:15:33,267 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=66.5 pTM=0.472 ipTM=0.171 tol=1.88
2024-12-08 21:15:47,528 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=66.4 pTM=0.473 ipTM=0.173 tol=2.06
2024-12-08 21:16:01,805 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=66.5 pTM=0.474 ipTM=0.172 tol=2.14
2024-12-08 21:16:16,061 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=66.2 pTM=0.473 ipTM=0.171 tol=2.36
2024-12-08 21:16:30,314 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=66.2 pTM=0.474 ipTM=0.173 tol=2.63
2024-12-08 21:16:44,558 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=66.6 pTM=0.482 ipTM=0.186 tol=4.34
2024-12-08 21:16:58,805 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=66.7 pTM=0.479 ipTM=0.179 tol=2.95
2024-12-08 21:16:58,805 alphafold2_multimer_v3_model_4_seed_000 took 442.1s (30 recycles)
2024-12-08 21:17:13,509 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=65 pTM=0.441 ipTM=0.212
2024-12-08 21:17:27,776 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.5 pTM=0.486 ipTM=0.185 tol=8.09
2024-12-08 21:17:42,059 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=66.5 pTM=0.481 ipTM=0.182 tol=8.51
2024-12-08 21:17:56,331 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=66.3 pTM=0.478 ipTM=0.179 tol=5.39
2024-12-08 21:18:10,603 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=66.3 pTM=0.484 ipTM=0.181 tol=2.9
2024-12-08 21:18:24,866 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=66.7 pTM=0.484 ipTM=0.188 tol=5.67
2024-12-08 21:18:39,135 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=66.6 pTM=0.482 ipTM=0.187 tol=3.04
2024-12-08 21:18:53,413 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=66.5 pTM=0.48 ipTM=0.187 tol=2.81
2024-12-08 21:19:07,695 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=66.6 pTM=0.484 ipTM=0.187 tol=3.32
2024-12-08 21:19:21,971 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=66.4 pTM=0.481 ipTM=0.188 tol=2.14
2024-12-08 21:19:36,246 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=66.2 pTM=0.48 ipTM=0.185 tol=1.98
2024-12-08 21:19:50,522 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=66.6 pTM=0.482 ipTM=0.186 tol=3.83
2024-12-08 21:20:04,808 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=66.4 pTM=0.48 ipTM=0.185 tol=3.16
2024-12-08 21:20:19,083 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=66.1 pTM=0.48 ipTM=0.186 tol=2.76
2024-12-08 21:20:33,361 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=66.2 pTM=0.48 ipTM=0.187 tol=2.22
2024-12-08 21:20:47,641 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=66.4 pTM=0.478 ipTM=0.182 tol=3.56
2024-12-08 21:21:01,913 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=66.2 pTM=0.48 ipTM=0.184 tol=3.71
2024-12-08 21:21:16,192 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=66.1 pTM=0.481 ipTM=0.188 tol=2.45
2024-12-08 21:21:30,471 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=66.3 pTM=0.479 ipTM=0.183 tol=1.31
2024-12-08 21:21:44,739 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=66.1 pTM=0.479 ipTM=0.184 tol=2.88
2024-12-08 21:21:59,017 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=65.9 pTM=0.479 ipTM=0.187 tol=3.33
2024-12-08 21:22:13,297 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=66.1 pTM=0.477 ipTM=0.182 tol=1.43
2024-12-08 21:22:27,573 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=66.1 pTM=0.48 ipTM=0.182 tol=3.06
2024-12-08 21:22:41,850 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=66.1 pTM=0.481 ipTM=0.182 tol=1.82
2024-12-08 21:22:56,128 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=66.2 pTM=0.478 ipTM=0.178 tol=2.05
2024-12-08 21:23:10,412 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=65.8 pTM=0.479 ipTM=0.184 tol=2.37
2024-12-08 21:23:24,689 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=66.1 pTM=0.48 ipTM=0.189 tol=1.65
2024-12-08 21:23:38,964 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=66 pTM=0.478 ipTM=0.179 tol=2.05
2024-12-08 21:23:53,253 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=66.1 pTM=0.48 ipTM=0.185 tol=2.11
2024-12-08 21:24:07,526 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=66.5 pTM=0.481 ipTM=0.184 tol=2.3
2024-12-08 21:24:21,810 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=66.4 pTM=0.481 ipTM=0.186 tol=1.87
2024-12-08 21:24:21,810 alphafold2_multimer_v3_model_5_seed_000 took 442.6s (30 recycles)
2024-12-08 21:24:22,251 reranking models by 'multimer' metric
2024-12-08 21:24:25,375 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 21:25:32,879 Relaxation took 70.6s
2024-12-08 21:25:32,879 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=66.4 pTM=0.481 ipTM=0.186
2024-12-08 21:26:44,371 Relaxation took 71.5s
2024-12-08 21:26:44,371 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=66.4 pTM=0.476 ipTM=0.181
2024-12-08 21:33:21,903 Relaxation took 397.5s
2024-12-08 21:33:21,904 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=66.7 pTM=0.479 ipTM=0.179
2024-12-08 21:34:38,670 Relaxation took 76.8s
2024-12-08 21:34:38,670 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=67.3 pTM=0.474 ipTM=0.174
2024-12-08 21:36:02,386 Relaxation took 83.7s
2024-12-08 21:36:02,386 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=67.1 pTM=0.47 ipTM=0.173
2024-12-08 21:36:03,932 Done