2024-12-08 20:49:47,256 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 20:49:48,766 Running on GPU
2024-12-08 20:49:50,926 Found 6 citations for tools or databases
2024-12-08 20:49:50,926 Query 1/1: TRIM11_RLF (length 2382)
2024-12-08 20:49:51,199 Sleeping for 10s. Reason: PENDING
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2024-12-08 20:56:36,338 Sleeping for 7s. Reason: PENDING
2024-12-08 20:56:43,600 Sleeping for 5s. Reason: PENDING
2024-12-08 20:56:48,853 Sleeping for 10s. Reason: RUNNING
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2024-12-08 20:59:30,327 Sleeping for 5s. Reason: RUNNING
2024-12-08 20:59:35,585 Sleeping for 7s. Reason: RUNNING
2024-12-08 20:59:42,843 Sleeping for 8s. Reason: RUNNING
2024-12-08 20:59:51,101 Sleeping for 5s. Reason: RUNNING
2024-12-08 20:59:56,355 Sleeping for 8s. Reason: RUNNING
2024-12-08 21:00:04,621 Sleeping for 8s. Reason: RUNNING
2024-12-08 21:00:12,883 Sleeping for 7s. Reason: RUNNING
2024-12-08 21:00:27,938 Setting max_seq=508, max_extra_seq=2048
2024-12-08 21:07:48,859 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=45.2 pTM=0.322 ipTM=0.219
2024-12-08 21:10:57,026 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=46.5 pTM=0.324 ipTM=0.236 tol=20.9
2024-12-08 21:14:05,120 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=48.1 pTM=0.324 ipTM=0.235 tol=11.9
2024-12-08 21:17:13,128 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=48.5 pTM=0.323 ipTM=0.238 tol=10.6
2024-12-08 21:20:21,112 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=48.4 pTM=0.323 ipTM=0.239 tol=7.08
2024-12-08 21:23:29,157 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=48.4 pTM=0.324 ipTM=0.241 tol=5.77
2024-12-08 21:26:37,225 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=48.3 pTM=0.325 ipTM=0.241 tol=6.57
2024-12-08 21:29:45,339 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=48.7 pTM=0.327 ipTM=0.24 tol=5.03
2024-12-08 21:32:53,366 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=48.7 pTM=0.324 ipTM=0.243 tol=3.5
2024-12-08 21:36:01,380 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=48.7 pTM=0.325 ipTM=0.243 tol=8.21
2024-12-08 21:39:09,428 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=48.7 pTM=0.324 ipTM=0.242 tol=6.49
2024-12-08 21:42:17,464 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=48.4 pTM=0.322 ipTM=0.244 tol=7.14
2024-12-08 21:45:25,557 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=48.6 pTM=0.324 ipTM=0.244 tol=5.64
2024-12-08 21:48:33,478 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=48.4 pTM=0.325 ipTM=0.242 tol=3.32
2024-12-08 21:51:41,468 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=48.7 pTM=0.326 ipTM=0.241 tol=3.9
2024-12-08 21:54:49,578 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=48.6 pTM=0.325 ipTM=0.24 tol=3.6
2024-12-08 21:57:57,657 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=48.7 pTM=0.327 ipTM=0.239 tol=6.73
2024-12-08 22:01:05,725 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=48.7 pTM=0.325 ipTM=0.24 tol=6.51
2024-12-08 22:04:13,674 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=48.5 pTM=0.324 ipTM=0.24 tol=3.25
2024-12-08 22:07:21,623 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=48.5 pTM=0.325 ipTM=0.24 tol=3.2
2024-12-08 22:10:29,822 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=48.7 pTM=0.325 ipTM=0.241 tol=5.07
2024-12-08 22:13:38,007 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=48.8 pTM=0.326 ipTM=0.241 tol=4.29
2024-12-08 22:16:46,144 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=48.7 pTM=0.324 ipTM=0.241 tol=4.36
2024-12-08 22:19:54,403 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=48.6 pTM=0.324 ipTM=0.241 tol=3.36
2024-12-08 22:23:02,563 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=48.8 pTM=0.326 ipTM=0.239 tol=6.21
2024-12-08 22:26:10,824 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=49 pTM=0.327 ipTM=0.24 tol=4.44
2024-12-08 22:29:18,925 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=48.9 pTM=0.325 ipTM=0.238 tol=6.02
2024-12-08 22:32:27,255 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=48.9 pTM=0.325 ipTM=0.239 tol=3.2
2024-12-08 22:35:35,303 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=48.8 pTM=0.326 ipTM=0.237 tol=3.68
2024-12-08 22:38:43,393 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=48.9 pTM=0.325 ipTM=0.237 tol=3.17
2024-12-08 22:41:51,286 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=48.9 pTM=0.325 ipTM=0.239 tol=3.4
2024-12-08 22:41:51,290 alphafold2_multimer_v3_model_1_seed_000 took 6062.3s (30 recycles)
2024-12-08 22:45:03,475 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=45.7 pTM=0.344 ipTM=0.227
2024-12-08 22:48:11,082 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=50.4 pTM=0.342 ipTM=0.227 tol=24.8
2024-12-08 22:51:18,816 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=50.8 pTM=0.342 ipTM=0.219 tol=12.6
2024-12-08 22:54:26,741 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=51.3 pTM=0.344 ipTM=0.221 tol=13.8
2024-12-08 22:57:34,792 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=51.7 pTM=0.346 ipTM=0.22 tol=10.7
2024-12-08 23:00:42,898 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=51.8 pTM=0.346 ipTM=0.22 tol=7.02
2024-12-08 23:03:50,772 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=51.9 pTM=0.345 ipTM=0.22 tol=5.66
2024-12-08 23:06:58,499 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=52 pTM=0.346 ipTM=0.22 tol=5.45
2024-12-08 23:10:06,239 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=52.3 pTM=0.345 ipTM=0.219 tol=4.11
2024-12-08 23:13:14,166 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=52.2 pTM=0.346 ipTM=0.221 tol=3.6
2024-12-08 23:16:22,095 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=52.2 pTM=0.347 ipTM=0.221 tol=2.52
2024-12-08 23:19:30,063 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=52.1 pTM=0.345 ipTM=0.219 tol=2.21
2024-12-08 23:22:38,099 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=52.3 pTM=0.346 ipTM=0.22 tol=2.48
2024-12-08 23:25:46,264 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=52.1 pTM=0.346 ipTM=0.22 tol=2.44
2024-12-08 23:28:54,405 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=52.3 pTM=0.346 ipTM=0.221 tol=1.87
2024-12-08 23:32:02,506 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=52.2 pTM=0.346 ipTM=0.221 tol=1.82
2024-12-08 23:35:10,587 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=52.3 pTM=0.347 ipTM=0.221 tol=2.65
2024-12-08 23:38:18,732 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=52.4 pTM=0.346 ipTM=0.221 tol=2.4
2024-12-08 23:41:26,931 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=52.1 pTM=0.346 ipTM=0.221 tol=2.9
2024-12-08 23:44:35,055 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=52.2 pTM=0.346 ipTM=0.22 tol=2.48
2024-12-08 23:47:43,062 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=52.2 pTM=0.346 ipTM=0.218 tol=3.16
2024-12-08 23:50:50,983 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=52.1 pTM=0.345 ipTM=0.218 tol=3.21
2024-12-08 23:53:58,953 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=52.3 pTM=0.345 ipTM=0.217 tol=2.71
2024-12-08 23:57:07,001 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=52.3 pTM=0.345 ipTM=0.217 tol=2.58
2024-12-09 00:00:15,160 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=52.2 pTM=0.345 ipTM=0.217 tol=6.86
2024-12-09 00:03:23,225 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=52.2 pTM=0.344 ipTM=0.214 tol=7.01
2024-12-09 00:06:31,139 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=52.2 pTM=0.345 ipTM=0.216 tol=7.42
2024-12-09 00:09:39,010 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=52.3 pTM=0.345 ipTM=0.215 tol=4.87
2024-12-09 00:12:46,958 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=52.1 pTM=0.345 ipTM=0.216 tol=5.26
2024-12-09 00:15:54,986 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=52.2 pTM=0.345 ipTM=0.217 tol=5.25
2024-12-09 00:19:03,109 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=52.3 pTM=0.345 ipTM=0.215 tol=5.5
2024-12-09 00:19:03,113 alphafold2_multimer_v3_model_2_seed_000 took 5827.1s (30 recycles)
2024-12-09 00:22:16,762 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=43.5 pTM=0.326 ipTM=0.213
2024-12-09 00:25:25,925 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=48.7 pTM=0.33 ipTM=0.215 tol=29.6
2024-12-09 00:28:34,843 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=49.3 pTM=0.329 ipTM=0.218 tol=14.8
2024-12-09 00:31:44,077 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=49.6 pTM=0.328 ipTM=0.207 tol=11.6
2024-12-09 00:34:53,078 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=49.8 pTM=0.329 ipTM=0.203 tol=12.8
2024-12-09 00:38:02,099 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=49.7 pTM=0.328 ipTM=0.215 tol=14.3
2024-12-09 00:41:11,253 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=49.7 pTM=0.329 ipTM=0.204 tol=12.3
2024-12-09 00:44:20,416 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=49.8 pTM=0.33 ipTM=0.203 tol=12.3
2024-12-09 00:47:29,572 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=49.7 pTM=0.33 ipTM=0.204 tol=15.3
2024-12-09 00:50:38,704 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=49.7 pTM=0.331 ipTM=0.205 tol=12.1
2024-12-09 00:53:47,844 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=49.8 pTM=0.332 ipTM=0.207 tol=9.49
2024-12-09 00:56:56,827 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=49.8 pTM=0.332 ipTM=0.207 tol=7.5
2024-12-09 01:00:05,897 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=50.1 pTM=0.332 ipTM=0.207 tol=6.74
2024-12-09 01:03:15,032 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=49.8 pTM=0.332 ipTM=0.207 tol=5.93
2024-12-09 01:06:24,041 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=50.1 pTM=0.332 ipTM=0.209 tol=6.24
2024-12-09 01:09:33,103 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=50.1 pTM=0.333 ipTM=0.208 tol=5.35
2024-12-09 01:12:42,238 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=50 pTM=0.332 ipTM=0.207 tol=5.09
2024-12-09 01:15:51,237 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=50.1 pTM=0.333 ipTM=0.208 tol=8.16
2024-12-09 01:19:00,353 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=50 pTM=0.333 ipTM=0.21 tol=6.12
2024-12-09 01:22:09,579 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=50.1 pTM=0.332 ipTM=0.209 tol=6.22
2024-12-09 01:25:18,723 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=50.1 pTM=0.332 ipTM=0.209 tol=12.4
2024-12-09 01:28:27,862 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=50 pTM=0.331 ipTM=0.208 tol=11.8
2024-12-09 01:31:37,117 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=50 pTM=0.331 ipTM=0.209 tol=4.25
2024-12-09 01:34:46,258 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=50.1 pTM=0.331 ipTM=0.208 tol=7.3
2024-12-09 01:37:55,299 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=50 pTM=0.331 ipTM=0.207 tol=6.07
2024-12-09 01:41:04,492 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=50.2 pTM=0.331 ipTM=0.207 tol=5.42
2024-12-09 01:44:13,581 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=50.3 pTM=0.331 ipTM=0.207 tol=3.9
2024-12-09 01:47:22,637 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=50.2 pTM=0.331 ipTM=0.208 tol=3.38
2024-12-09 01:50:31,737 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=50.2 pTM=0.331 ipTM=0.207 tol=4.32
2024-12-09 01:53:40,907 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=50.1 pTM=0.331 ipTM=0.208 tol=5.14
2024-12-09 01:56:49,986 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=50.3 pTM=0.332 ipTM=0.208 tol=4.35
2024-12-09 01:56:49,990 alphafold2_multimer_v3_model_3_seed_000 took 5862.0s (30 recycles)
2024-12-09 02:00:03,630 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=45.6 pTM=0.327 ipTM=0.212
2024-12-09 02:03:13,211 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=44.5 pTM=0.328 ipTM=0.226 tol=24
2024-12-09 02:06:23,057 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=44 pTM=0.326 ipTM=0.223 tol=20.1
2024-12-09 02:09:32,756 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=44.2 pTM=0.326 ipTM=0.219 tol=15.1
2024-12-09 02:12:42,429 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=44.2 pTM=0.328 ipTM=0.223 tol=15.4
2024-12-09 02:15:52,219 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=44 pTM=0.327 ipTM=0.22 tol=17
2024-12-09 02:19:02,038 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=44.2 pTM=0.327 ipTM=0.226 tol=17
2024-12-09 02:22:11,686 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=44.8 pTM=0.325 ipTM=0.22 tol=16.2
2024-12-09 02:25:21,328 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=44.8 pTM=0.326 ipTM=0.225 tol=12.8
2024-12-09 02:28:31,000 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=44.6 pTM=0.325 ipTM=0.229 tol=11.1
2024-12-09 02:31:40,909 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=44.7 pTM=0.325 ipTM=0.225 tol=13.9
2024-12-09 02:34:50,539 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=44.4 pTM=0.325 ipTM=0.221 tol=14.9
2024-12-09 02:38:00,155 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=44.2 pTM=0.326 ipTM=0.228 tol=13.1
2024-12-09 02:41:09,768 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=44.2 pTM=0.326 ipTM=0.235 tol=12.3
2024-12-09 02:44:19,479 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=44.3 pTM=0.326 ipTM=0.226 tol=14.2
2024-12-09 02:47:29,170 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=44.6 pTM=0.326 ipTM=0.243 tol=16
2024-12-09 02:50:38,927 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=44.8 pTM=0.326 ipTM=0.228 tol=13.8
2024-12-09 02:53:48,583 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=44.4 pTM=0.325 ipTM=0.222 tol=17.1
2024-12-09 02:56:58,200 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=44.3 pTM=0.328 ipTM=0.223 tol=17.3
2024-12-09 03:00:07,736 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=44.1 pTM=0.326 ipTM=0.227 tol=13
2024-12-09 03:03:17,554 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=44.8 pTM=0.325 ipTM=0.227 tol=18.2
2024-12-09 03:06:27,333 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=46.2 pTM=0.323 ipTM=0.213 tol=19.5
2024-12-09 03:09:36,888 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=47 pTM=0.324 ipTM=0.21 tol=17
2024-12-09 03:12:46,445 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=47.9 pTM=0.322 ipTM=0.214 tol=17.2
2024-12-09 03:15:55,892 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=48.2 pTM=0.326 ipTM=0.225 tol=10.5
2024-12-09 03:19:05,429 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=48.3 pTM=0.323 ipTM=0.21 tol=12.9
2024-12-09 03:22:14,929 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=48.3 pTM=0.323 ipTM=0.211 tol=14.2
2024-12-09 03:25:24,568 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=48.5 pTM=0.323 ipTM=0.211 tol=14.2
2024-12-09 03:28:34,193 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=48.1 pTM=0.322 ipTM=0.207 tol=11.7
2024-12-09 03:31:43,911 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=48.3 pTM=0.323 ipTM=0.207 tol=15.7
2024-12-09 03:34:53,509 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=48.5 pTM=0.323 ipTM=0.209 tol=10.7
2024-12-09 03:34:53,513 alphafold2_multimer_v3_model_4_seed_000 took 5878.8s (30 recycles)
2024-12-09 03:38:06,963 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=43.6 pTM=0.325 ipTM=0.204
2024-12-09 03:41:15,974 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=47.3 pTM=0.334 ipTM=0.211 tol=22.2
2024-12-09 03:44:24,903 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=48.1 pTM=0.33 ipTM=0.208 tol=12.3
2024-12-09 03:47:33,859 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=48.7 pTM=0.333 ipTM=0.214 tol=13.5
2024-12-09 03:50:42,674 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=48.9 pTM=0.333 ipTM=0.217 tol=10.5
2024-12-09 03:53:51,479 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=49.2 pTM=0.333 ipTM=0.217 tol=14.4
2024-12-09 03:57:00,261 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=49.2 pTM=0.333 ipTM=0.217 tol=13.6
2024-12-09 04:00:09,032 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=49.2 pTM=0.332 ipTM=0.216 tol=16.9
2024-12-09 04:03:17,985 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=49.1 pTM=0.331 ipTM=0.215 tol=13.9
2024-12-09 04:06:26,843 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=48.8 pTM=0.33 ipTM=0.214 tol=8.27
2024-12-09 04:09:35,536 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=48.8 pTM=0.329 ipTM=0.213 tol=9.02
2024-12-09 04:12:44,208 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=49.1 pTM=0.328 ipTM=0.21 tol=10.7
2024-12-09 04:15:52,936 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=49 pTM=0.328 ipTM=0.209 tol=8.6
2024-12-09 04:19:01,633 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=48.9 pTM=0.326 ipTM=0.211 tol=8.71
2024-12-09 04:22:10,401 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=49 pTM=0.326 ipTM=0.215 tol=13.8
2024-12-09 04:25:19,285 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=49 pTM=0.326 ipTM=0.226 tol=9.72
2024-12-09 04:28:28,120 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=48.9 pTM=0.326 ipTM=0.222 tol=12.4
2024-12-09 04:31:37,094 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=49 pTM=0.326 ipTM=0.218 tol=10.3
2024-12-09 04:34:45,882 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=49.1 pTM=0.326 ipTM=0.22 tol=11.4
2024-12-09 04:37:54,677 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=49 pTM=0.326 ipTM=0.217 tol=10.9
2024-12-09 04:41:03,486 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=49 pTM=0.326 ipTM=0.219 tol=11.6
2024-12-09 04:44:12,403 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=49.1 pTM=0.325 ipTM=0.22 tol=13.1
2024-12-09 04:47:21,227 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=49.2 pTM=0.329 ipTM=0.23 tol=12.4
2024-12-09 04:50:30,091 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=49.1 pTM=0.331 ipTM=0.236 tol=10.3
2024-12-09 04:53:38,848 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=49.2 pTM=0.329 ipTM=0.225 tol=8.93
2024-12-09 04:56:47,667 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=49.3 pTM=0.332 ipTM=0.229 tol=6.28
2024-12-09 04:59:56,454 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=49.1 pTM=0.332 ipTM=0.229 tol=5.81
2024-12-09 05:03:05,220 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=49.2 pTM=0.333 ipTM=0.226 tol=8.59
2024-12-09 05:06:14,015 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=49 pTM=0.331 ipTM=0.227 tol=9.09
2024-12-09 05:09:22,833 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=49 pTM=0.331 ipTM=0.223 tol=7.41
2024-12-09 05:12:31,416 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=49.2 pTM=0.331 ipTM=0.222 tol=6.06
2024-12-09 05:12:31,420 alphafold2_multimer_v3_model_5_seed_000 took 5853.2s (30 recycles)
2024-12-09 05:12:36,143 reranking models by 'multimer' metric
2024-12-09 05:12:42,027 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 05:28:51,528 Relaxation took 975.4s
2024-12-09 05:28:51,528 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=48.9 pTM=0.325 ipTM=0.239
2024-12-09 05:46:56,793 Relaxation took 1085.3s
2024-12-09 05:46:56,793 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=49.2 pTM=0.331 ipTM=0.222
2024-12-09 06:01:58,702 Relaxation took 901.9s
2024-12-09 06:01:58,702 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=52.3 pTM=0.345 ipTM=0.215
2024-12-09 06:21:47,009 Relaxation took 1188.3s
2024-12-09 06:21:47,009 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=50.3 pTM=0.332 ipTM=0.208
2024-12-09 06:37:25,134 Relaxation took 938.1s
2024-12-09 06:37:25,135 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=48.5 pTM=0.323 ipTM=0.209
2024-12-09 06:37:34,390 Done