2024-12-08 20:49:47,088 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 20:49:47,433 Running on GPU
2024-12-08 20:49:50,702 Found 6 citations for tools or databases
2024-12-08 20:49:50,702 Query 1/1: TRIM11_RSPH6A (length 1185)
2024-12-08 20:49:50,998 Sleeping for 9s. Reason: PENDING
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2024-12-08 20:52:53,379 Sleeping for 7s. Reason: PENDING
2024-12-08 20:53:00,641 Sleeping for 5s. Reason: RUNNING
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2024-12-08 20:53:12,170 Sleeping for 9s. Reason: RUNNING
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2024-12-08 20:53:30,690 Sleeping for 7s. Reason: RUNNING
2024-12-08 20:53:37,947 Sleeping for 10s. Reason: RUNNING
2024-12-08 20:53:48,219 Sleeping for 10s. Reason: RUNNING
2024-12-08 20:53:58,483 Sleeping for 8s. Reason: RUNNING
2024-12-08 20:54:06,749 Sleeping for 9s. Reason: RUNNING
2024-12-08 20:54:16,011 Sleeping for 8s. Reason: RUNNING
2024-12-08 20:54:24,271 Sleeping for 5s. Reason: RUNNING
2024-12-08 20:54:29,529 Sleeping for 10s. Reason: RUNNING
2024-12-08 20:54:39,801 Sleeping for 10s. Reason: RUNNING
2024-12-08 20:54:54,087 Setting max_seq=508, max_extra_seq=2048
2024-12-08 20:59:03,977 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=56.9 pTM=0.379 ipTM=0.173
2024-12-08 20:59:41,663 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=61.8 pTM=0.384 ipTM=0.177 tol=26.1
2024-12-08 21:00:19,538 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=62.6 pTM=0.372 ipTM=0.157 tol=29.9
2024-12-08 21:00:57,455 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=63 pTM=0.374 ipTM=0.156 tol=6.56
2024-12-08 21:01:35,471 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=63.1 pTM=0.372 ipTM=0.154 tol=8.52
2024-12-08 21:02:13,551 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=62.7 pTM=0.37 ipTM=0.155 tol=5.41
2024-12-08 21:02:51,698 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=63.2 pTM=0.372 ipTM=0.156 tol=5.34
2024-12-08 21:03:29,868 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=63.2 pTM=0.369 ipTM=0.157 tol=6.84
2024-12-08 21:04:08,036 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=63.2 pTM=0.37 ipTM=0.156 tol=7.13
2024-12-08 21:04:46,201 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=63.2 pTM=0.369 ipTM=0.16 tol=4.32
2024-12-08 21:05:24,376 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=63.2 pTM=0.369 ipTM=0.157 tol=5.39
2024-12-08 21:06:02,564 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=63.1 pTM=0.369 ipTM=0.159 tol=5.46
2024-12-08 21:06:40,722 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=63.3 pTM=0.37 ipTM=0.157 tol=4.68
2024-12-08 21:07:18,844 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=62.9 pTM=0.371 ipTM=0.159 tol=3.61
2024-12-08 21:07:56,969 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=63 pTM=0.371 ipTM=0.157 tol=3.26
2024-12-08 21:08:35,074 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=63.2 pTM=0.371 ipTM=0.158 tol=4.71
2024-12-08 21:09:13,169 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=63.2 pTM=0.37 ipTM=0.156 tol=3.06
2024-12-08 21:09:51,275 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=63.1 pTM=0.369 ipTM=0.158 tol=3.88
2024-12-08 21:10:29,377 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=63.3 pTM=0.37 ipTM=0.156 tol=1.62
2024-12-08 21:11:07,464 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=62.8 pTM=0.369 ipTM=0.159 tol=2.8
2024-12-08 21:11:45,536 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=63 pTM=0.369 ipTM=0.158 tol=4.18
2024-12-08 21:12:23,591 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=63.1 pTM=0.369 ipTM=0.158 tol=3.55
2024-12-08 21:13:01,680 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=63.1 pTM=0.368 ipTM=0.157 tol=2.09
2024-12-08 21:13:39,737 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=63.2 pTM=0.37 ipTM=0.157 tol=3.47
2024-12-08 21:14:17,817 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=63.4 pTM=0.37 ipTM=0.157 tol=2.31
2024-12-08 21:14:55,833 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=63.1 pTM=0.369 ipTM=0.157 tol=3.55
2024-12-08 21:15:33,847 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=63.4 pTM=0.369 ipTM=0.156 tol=3.84
2024-12-08 21:16:11,849 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=63.2 pTM=0.368 ipTM=0.155 tol=3.16
2024-12-08 21:16:49,820 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=63.2 pTM=0.369 ipTM=0.157 tol=3.21
2024-12-08 21:17:27,824 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=63.2 pTM=0.371 ipTM=0.156 tol=3.25
2024-12-08 21:18:05,809 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=63.2 pTM=0.37 ipTM=0.161 tol=2.76
2024-12-08 21:18:05,810 alphafold2_multimer_v3_model_1_seed_000 took 1385.1s (30 recycles)
2024-12-08 21:18:44,918 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=61.4 pTM=0.375 ipTM=0.149
2024-12-08 21:19:22,991 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=63.6 pTM=0.376 ipTM=0.15 tol=10.1
2024-12-08 21:20:01,073 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=63.9 pTM=0.374 ipTM=0.156 tol=11.2
2024-12-08 21:20:39,169 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=64.3 pTM=0.375 ipTM=0.157 tol=4.16
2024-12-08 21:21:17,280 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=64 pTM=0.373 ipTM=0.155 tol=4.29
2024-12-08 21:21:55,404 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=64 pTM=0.372 ipTM=0.153 tol=4.81
2024-12-08 21:22:33,508 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=64.2 pTM=0.373 ipTM=0.152 tol=4.43
2024-12-08 21:23:11,624 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=64.2 pTM=0.373 ipTM=0.154 tol=5.3
2024-12-08 21:23:49,768 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=63.2 pTM=0.374 ipTM=0.152 tol=17.6
2024-12-08 21:24:27,871 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=64.1 pTM=0.373 ipTM=0.152 tol=11.3
2024-12-08 21:25:06,029 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=64.1 pTM=0.373 ipTM=0.154 tol=8.28
2024-12-08 21:25:44,162 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=64.3 pTM=0.375 ipTM=0.151 tol=4.68
2024-12-08 21:26:22,280 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=64.2 pTM=0.376 ipTM=0.152 tol=8.16
2024-12-08 21:27:00,424 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=64.2 pTM=0.377 ipTM=0.155 tol=4.83
2024-12-08 21:27:38,580 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=64.4 pTM=0.377 ipTM=0.156 tol=3.83
2024-12-08 21:28:16,677 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=64.7 pTM=0.379 ipTM=0.156 tol=4.38
2024-12-08 21:28:54,821 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=64.6 pTM=0.378 ipTM=0.155 tol=2.98
2024-12-08 21:29:32,980 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=64.4 pTM=0.376 ipTM=0.157 tol=2.49
2024-12-08 21:30:11,161 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=64.4 pTM=0.376 ipTM=0.156 tol=2.52
2024-12-08 21:30:49,350 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=64.1 pTM=0.375 ipTM=0.156 tol=2.05
2024-12-08 21:31:27,537 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=64.1 pTM=0.375 ipTM=0.156 tol=2.45
2024-12-08 21:32:05,739 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=64.4 pTM=0.377 ipTM=0.157 tol=2.11
2024-12-08 21:32:43,907 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=64.2 pTM=0.375 ipTM=0.157 tol=2.18
2024-12-08 21:33:22,118 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=64.3 pTM=0.375 ipTM=0.156 tol=3.08
2024-12-08 21:34:00,251 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=64.4 pTM=0.377 ipTM=0.156 tol=2.35
2024-12-08 21:34:38,403 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=63.9 pTM=0.374 ipTM=0.157 tol=3.22
2024-12-08 21:35:16,530 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=64.3 pTM=0.374 ipTM=0.156 tol=3.1
2024-12-08 21:35:54,631 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=64.3 pTM=0.377 ipTM=0.157 tol=4.39
2024-12-08 21:36:32,713 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=64.1 pTM=0.376 ipTM=0.158 tol=4.6
2024-12-08 21:37:10,798 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=64.3 pTM=0.376 ipTM=0.156 tol=3.36
2024-12-08 21:37:48,906 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=64.4 pTM=0.375 ipTM=0.156 tol=2.94
2024-12-08 21:37:48,907 alphafold2_multimer_v3_model_2_seed_000 took 1182.0s (30 recycles)
2024-12-08 21:38:28,131 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=56.9 pTM=0.371 ipTM=0.152
2024-12-08 21:39:06,230 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=62 pTM=0.379 ipTM=0.159 tol=22.7
2024-12-08 21:39:44,377 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=62.5 pTM=0.374 ipTM=0.147 tol=13.5
2024-12-08 21:40:22,488 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=62.1 pTM=0.375 ipTM=0.155 tol=7.21
2024-12-08 21:41:00,614 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=62.2 pTM=0.373 ipTM=0.158 tol=5.26
2024-12-08 21:41:38,751 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=62.4 pTM=0.372 ipTM=0.171 tol=5.02
2024-12-08 21:42:16,896 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=62.8 pTM=0.373 ipTM=0.2 tol=4.16
2024-12-08 21:42:55,015 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=62.6 pTM=0.373 ipTM=0.213 tol=8.49
2024-12-08 21:43:33,140 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=62.8 pTM=0.375 ipTM=0.193 tol=6.79
2024-12-08 21:44:11,280 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=62.8 pTM=0.374 ipTM=0.216 tol=4.32
2024-12-08 21:44:49,372 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=62.7 pTM=0.374 ipTM=0.221 tol=3.34
2024-12-08 21:45:27,495 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=63 pTM=0.375 ipTM=0.234 tol=3.35
2024-12-08 21:46:05,593 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=62.9 pTM=0.375 ipTM=0.237 tol=5.63
2024-12-08 21:46:43,722 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=63 pTM=0.375 ipTM=0.229 tol=4.27
2024-12-08 21:47:21,839 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=63 pTM=0.375 ipTM=0.224 tol=4.54
2024-12-08 21:47:59,949 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=63.2 pTM=0.375 ipTM=0.225 tol=3.89
2024-12-08 21:48:38,028 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=63.1 pTM=0.375 ipTM=0.203 tol=3.99
2024-12-08 21:49:16,076 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=63.1 pTM=0.375 ipTM=0.202 tol=4.63
2024-12-08 21:49:54,123 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=63 pTM=0.375 ipTM=0.195 tol=2.67
2024-12-08 21:50:32,286 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=62.5 pTM=0.373 ipTM=0.203 tol=2.27
2024-12-08 21:51:10,395 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=62.6 pTM=0.373 ipTM=0.203 tol=1.54
2024-12-08 21:51:48,548 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=62.9 pTM=0.374 ipTM=0.202 tol=2.75
2024-12-08 21:52:26,766 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=62.6 pTM=0.373 ipTM=0.189 tol=3.46
2024-12-08 21:53:04,992 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=62.7 pTM=0.373 ipTM=0.191 tol=2.41
2024-12-08 21:53:43,172 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=62.6 pTM=0.372 ipTM=0.198 tol=2.51
2024-12-08 21:54:21,350 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=62.7 pTM=0.372 ipTM=0.202 tol=2.9
2024-12-08 21:54:59,500 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=62.8 pTM=0.373 ipTM=0.205 tol=1.53
2024-12-08 21:55:37,664 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=62.8 pTM=0.373 ipTM=0.204 tol=1.2
2024-12-08 21:56:15,803 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=62.7 pTM=0.373 ipTM=0.205 tol=1.76
2024-12-08 21:56:53,993 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=63 pTM=0.374 ipTM=0.224 tol=1.74
2024-12-08 21:57:32,135 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=62.8 pTM=0.373 ipTM=0.213 tol=1.26
2024-12-08 21:57:32,136 alphafold2_multimer_v3_model_3_seed_000 took 1182.1s (30 recycles)
2024-12-08 21:58:11,483 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=54.9 pTM=0.369 ipTM=0.182
2024-12-08 21:58:49,810 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=59.7 pTM=0.359 ipTM=0.138 tol=30
2024-12-08 21:59:28,008 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=62.1 pTM=0.367 ipTM=0.169 tol=12.9
2024-12-08 22:00:06,192 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=62.9 pTM=0.372 ipTM=0.16 tol=8.36
2024-12-08 22:00:44,400 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=62.9 pTM=0.37 ipTM=0.152 tol=5.92
2024-12-08 22:01:22,594 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=62.8 pTM=0.369 ipTM=0.18 tol=3.68
2024-12-08 22:02:00,797 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=63.2 pTM=0.37 ipTM=0.165 tol=5.54
2024-12-08 22:02:38,990 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=63 pTM=0.371 ipTM=0.177 tol=2.66
2024-12-08 22:03:17,186 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=63 pTM=0.371 ipTM=0.169 tol=2.15
2024-12-08 22:03:55,387 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=62.9 pTM=0.37 ipTM=0.163 tol=4.96
2024-12-08 22:04:33,563 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=62.9 pTM=0.37 ipTM=0.163 tol=2.81
2024-12-08 22:05:11,745 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=62.7 pTM=0.369 ipTM=0.157 tol=5.18
2024-12-08 22:05:49,901 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=62.7 pTM=0.369 ipTM=0.159 tol=5.08
2024-12-08 22:06:28,127 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=62.3 pTM=0.368 ipTM=0.151 tol=5.68
2024-12-08 22:07:06,362 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=62.5 pTM=0.369 ipTM=0.15 tol=4.71
2024-12-08 22:07:44,537 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=62.3 pTM=0.367 ipTM=0.15 tol=3.33
2024-12-08 22:08:22,705 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=62.7 pTM=0.37 ipTM=0.151 tol=3.87
2024-12-08 22:09:00,889 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=62.5 pTM=0.369 ipTM=0.153 tol=5.17
2024-12-08 22:09:39,093 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=62.4 pTM=0.37 ipTM=0.152 tol=4.02
2024-12-08 22:10:17,292 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=61.8 pTM=0.368 ipTM=0.153 tol=5.49
2024-12-08 22:10:55,487 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=62.2 pTM=0.368 ipTM=0.151 tol=2.62
2024-12-08 22:11:33,668 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=62.1 pTM=0.368 ipTM=0.15 tol=3.12
2024-12-08 22:12:11,830 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=62 pTM=0.368 ipTM=0.151 tol=5.67
2024-12-08 22:12:49,984 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=62 pTM=0.369 ipTM=0.151 tol=6.11
2024-12-08 22:13:28,133 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=61.9 pTM=0.368 ipTM=0.15 tol=5.78
2024-12-08 22:14:06,306 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=61.7 pTM=0.367 ipTM=0.152 tol=4.11
2024-12-08 22:14:44,450 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=62.2 pTM=0.369 ipTM=0.151 tol=2.46
2024-12-08 22:15:22,629 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=61.9 pTM=0.367 ipTM=0.15 tol=3.84
2024-12-08 22:16:00,808 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=61.8 pTM=0.368 ipTM=0.151 tol=2.93
2024-12-08 22:16:38,972 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=62.1 pTM=0.369 ipTM=0.149 tol=1.78
2024-12-08 22:17:17,189 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=62 pTM=0.369 ipTM=0.151 tol=5.84
2024-12-08 22:17:17,190 alphafold2_multimer_v3_model_4_seed_000 took 1184.0s (30 recycles)
2024-12-08 22:17:56,460 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=56.6 pTM=0.374 ipTM=0.164
2024-12-08 22:18:34,716 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=58.6 pTM=0.375 ipTM=0.16 tol=20.2
2024-12-08 22:19:12,997 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=61.4 pTM=0.372 ipTM=0.151 tol=7.39
2024-12-08 22:19:51,250 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=62 pTM=0.374 ipTM=0.157 tol=5.77
2024-12-08 22:20:29,458 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.9 pTM=0.374 ipTM=0.159 tol=5.24
2024-12-08 22:21:07,727 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=61.8 pTM=0.375 ipTM=0.161 tol=7.36
2024-12-08 22:21:45,906 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=62 pTM=0.376 ipTM=0.161 tol=7.59
2024-12-08 22:22:24,155 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=62.2 pTM=0.377 ipTM=0.162 tol=5.86
2024-12-08 22:23:02,305 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=62.3 pTM=0.379 ipTM=0.166 tol=7.92
2024-12-08 22:23:40,461 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=62.2 pTM=0.378 ipTM=0.184 tol=5.26
2024-12-08 22:24:18,606 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=62.3 pTM=0.375 ipTM=0.202 tol=5.89
2024-12-08 22:24:56,781 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=62.7 pTM=0.376 ipTM=0.206 tol=6.14
2024-12-08 22:25:35,000 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=62.6 pTM=0.375 ipTM=0.197 tol=2.73
2024-12-08 22:26:13,192 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=62.4 pTM=0.375 ipTM=0.187 tol=3.41
2024-12-08 22:26:51,369 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=62.4 pTM=0.375 ipTM=0.179 tol=3
2024-12-08 22:27:29,545 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=62.3 pTM=0.374 ipTM=0.18 tol=3.51
2024-12-08 22:28:07,729 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=62.3 pTM=0.374 ipTM=0.182 tol=2.83
2024-12-08 22:28:46,026 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=62.5 pTM=0.375 ipTM=0.174 tol=4.42
2024-12-08 22:29:24,198 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=62.3 pTM=0.375 ipTM=0.179 tol=4.12
2024-12-08 22:30:02,388 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=62 pTM=0.373 ipTM=0.18 tol=4.35
2024-12-08 22:30:40,568 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=62.2 pTM=0.374 ipTM=0.181 tol=4.57
2024-12-08 22:31:18,729 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=62.2 pTM=0.374 ipTM=0.184 tol=3.58
2024-12-08 22:31:56,874 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=62.1 pTM=0.374 ipTM=0.189 tol=3.45
2024-12-08 22:32:35,026 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=62.2 pTM=0.373 ipTM=0.19 tol=2.25
2024-12-08 22:33:13,171 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=62.2 pTM=0.373 ipTM=0.19 tol=3.35
2024-12-08 22:33:51,309 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=62.1 pTM=0.373 ipTM=0.187 tol=4.27
2024-12-08 22:34:29,458 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=62.4 pTM=0.374 ipTM=0.189 tol=5.24
2024-12-08 22:35:07,613 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=62.2 pTM=0.373 ipTM=0.176 tol=4.66
2024-12-08 22:35:45,762 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61.9 pTM=0.373 ipTM=0.188 tol=5.52
2024-12-08 22:36:23,921 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=62.3 pTM=0.374 ipTM=0.198 tol=2.44
2024-12-08 22:37:02,089 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=62 pTM=0.374 ipTM=0.199 tol=5.57
2024-12-08 22:37:02,091 alphafold2_multimer_v3_model_5_seed_000 took 1183.8s (30 recycles)
2024-12-08 22:37:03,169 reranking models by 'multimer' metric
2024-12-08 22:37:06,475 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 22:40:17,442 Relaxation took 194.3s
2024-12-08 22:40:17,442 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=62.8 pTM=0.373 ipTM=0.213
2024-12-08 22:43:08,932 Relaxation took 171.5s
2024-12-08 22:43:08,932 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=62 pTM=0.374 ipTM=0.199
2024-12-08 22:45:08,647 Relaxation took 119.7s
2024-12-08 22:45:08,647 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=63.2 pTM=0.37 ipTM=0.161
2024-12-08 22:47:40,609 Relaxation took 152.0s
2024-12-08 22:47:40,609 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=64.4 pTM=0.375 ipTM=0.156
2024-12-08 22:49:26,763 Relaxation took 106.2s
2024-12-08 22:49:26,763 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=62 pTM=0.369 ipTM=0.151
2024-12-08 22:49:29,477 Done