2024-12-08 21:06:08,599 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 21:06:08,880 Running on GPU
2024-12-08 21:06:11,218 Found 6 citations for tools or databases
2024-12-08 21:06:11,219 Query 1/1: TRIM13_MARCH4 (length 817)
2024-12-08 21:06:11,482 Sleeping for 8s. Reason: PENDING
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2024-12-08 21:07:07,048 Sleeping for 8s. Reason: RUNNING
2024-12-08 21:07:15,312 Sleeping for 6s. Reason: RUNNING
2024-12-08 21:07:21,571 Sleeping for 6s. Reason: RUNNING
2024-12-08 21:07:27,829 Sleeping for 7s. Reason: RUNNING
2024-12-08 21:07:35,090 Sleeping for 9s. Reason: RUNNING
2024-12-08 21:07:44,346 Sleeping for 6s. Reason: RUNNING
2024-12-08 21:07:50,611 Sleeping for 5s. Reason: RUNNING
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2024-12-08 21:08:03,122 Sleeping for 7s. Reason: RUNNING
2024-12-08 21:08:10,387 Sleeping for 9s. Reason: RUNNING
2024-12-08 21:08:19,642 Sleeping for 10s. Reason: RUNNING
2024-12-08 21:08:29,911 Sleeping for 9s. Reason: RUNNING
2024-12-08 21:08:39,176 Sleeping for 5s. Reason: RUNNING
2024-12-08 21:08:44,431 Sleeping for 10s. Reason: RUNNING
2024-12-08 21:08:56,312 Sleeping for 8s. Reason: PENDING
2024-12-08 21:09:04,575 Sleeping for 10s. Reason: RUNNING
2024-12-08 21:09:14,832 Sleeping for 9s. Reason: RUNNING
2024-12-08 21:09:24,102 Sleeping for 8s. Reason: RUNNING
2024-12-08 21:09:32,360 Sleeping for 6s. Reason: RUNNING
2024-12-08 21:09:38,612 Sleeping for 5s. Reason: RUNNING
2024-12-08 21:09:43,872 Sleeping for 9s. Reason: RUNNING
2024-12-08 21:09:53,128 Sleeping for 7s. Reason: RUNNING
2024-12-08 21:10:00,386 Sleeping for 9s. Reason: RUNNING
2024-12-08 21:10:12,193 Setting max_seq=508, max_extra_seq=2048
2024-12-08 21:13:11,628 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=54.4 pTM=0.251 ipTM=0.134
2024-12-08 21:13:26,680 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=55.2 pTM=0.252 ipTM=0.139 tol=15
2024-12-08 21:13:41,770 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=55.3 pTM=0.254 ipTM=0.133 tol=7.58
2024-12-08 21:13:56,889 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=55 pTM=0.251 ipTM=0.131 tol=7.75
2024-12-08 21:14:12,019 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=55.2 pTM=0.252 ipTM=0.132 tol=4.96
2024-12-08 21:14:27,177 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=54.9 pTM=0.253 ipTM=0.133 tol=4.07
2024-12-08 21:14:42,339 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=54.9 pTM=0.253 ipTM=0.135 tol=3.95
2024-12-08 21:14:57,508 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=54.9 pTM=0.254 ipTM=0.136 tol=3.18
2024-12-08 21:15:12,686 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=55.4 pTM=0.256 ipTM=0.136 tol=2.81
2024-12-08 21:15:27,874 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=55.6 pTM=0.255 ipTM=0.135 tol=6.03
2024-12-08 21:15:43,061 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=55.6 pTM=0.257 ipTM=0.133 tol=2.75
2024-12-08 21:15:58,259 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=55.4 pTM=0.261 ipTM=0.137 tol=6.32
2024-12-08 21:16:13,456 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=55.6 pTM=0.263 ipTM=0.14 tol=2.91
2024-12-08 21:16:28,664 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=55.3 pTM=0.265 ipTM=0.144 tol=5.75
2024-12-08 21:16:43,864 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=55 pTM=0.264 ipTM=0.142 tol=7.07
2024-12-08 21:16:59,065 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=55.6 pTM=0.266 ipTM=0.143 tol=7.38
2024-12-08 21:17:14,262 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=55.5 pTM=0.265 ipTM=0.143 tol=5.34
2024-12-08 21:17:29,462 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=55.7 pTM=0.265 ipTM=0.145 tol=5.02
2024-12-08 21:17:44,661 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=55.8 pTM=0.263 ipTM=0.147 tol=3.28
2024-12-08 21:17:59,856 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=56 pTM=0.266 ipTM=0.15 tol=6.06
2024-12-08 21:18:15,046 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=55.9 pTM=0.265 ipTM=0.156 tol=4.19
2024-12-08 21:18:30,243 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=56.2 pTM=0.263 ipTM=0.157 tol=2.15
2024-12-08 21:18:45,433 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=56.4 pTM=0.268 ipTM=0.16 tol=1.89
2024-12-08 21:19:00,614 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=56.6 pTM=0.271 ipTM=0.164 tol=1.78
2024-12-08 21:19:15,800 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=56.3 pTM=0.271 ipTM=0.172 tol=2.99
2024-12-08 21:19:30,965 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=56.7 pTM=0.274 ipTM=0.172 tol=3.01
2024-12-08 21:19:46,132 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=56.6 pTM=0.273 ipTM=0.173 tol=2.43
2024-12-08 21:20:01,307 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=56.7 pTM=0.275 ipTM=0.175 tol=3.52
2024-12-08 21:20:16,482 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=56.6 pTM=0.272 ipTM=0.172 tol=3.81
2024-12-08 21:20:31,668 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=56.5 pTM=0.274 ipTM=0.175 tol=4.49
2024-12-08 21:20:46,840 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=56.7 pTM=0.275 ipTM=0.179 tol=4.41
2024-12-08 21:20:46,841 alphafold2_multimer_v3_model_1_seed_000 took 629.8s (30 recycles)
2024-12-08 21:21:02,448 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=52.2 pTM=0.261 ipTM=0.124
2024-12-08 21:21:17,670 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=53.3 pTM=0.259 ipTM=0.129 tol=13.6
2024-12-08 21:21:32,899 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=53.5 pTM=0.259 ipTM=0.13 tol=9.12
2024-12-08 21:21:48,116 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=54 pTM=0.261 ipTM=0.136 tol=7.18
2024-12-08 21:22:03,325 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=54.3 pTM=0.264 ipTM=0.137 tol=5.39
2024-12-08 21:22:18,523 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=54.1 pTM=0.263 ipTM=0.139 tol=2.68
2024-12-08 21:22:33,726 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=54.1 pTM=0.263 ipTM=0.138 tol=2.3
2024-12-08 21:22:48,931 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=54.2 pTM=0.265 ipTM=0.139 tol=2.81
2024-12-08 21:23:04,145 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=54.3 pTM=0.264 ipTM=0.139 tol=3.31
2024-12-08 21:23:19,354 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=54 pTM=0.263 ipTM=0.139 tol=2.53
2024-12-08 21:23:34,563 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=54.3 pTM=0.264 ipTM=0.138 tol=2.29
2024-12-08 21:23:49,765 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=54.2 pTM=0.268 ipTM=0.139 tol=3.34
2024-12-08 21:24:04,957 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=54.3 pTM=0.266 ipTM=0.141 tol=2.78
2024-12-08 21:24:20,161 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=54.3 pTM=0.262 ipTM=0.138 tol=3.09
2024-12-08 21:24:35,368 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=53.7 pTM=0.259 ipTM=0.14 tol=4.62
2024-12-08 21:24:50,566 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=53.9 pTM=0.264 ipTM=0.143 tol=3.27
2024-12-08 21:25:05,774 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=54.2 pTM=0.264 ipTM=0.14 tol=3.74
2024-12-08 21:25:20,982 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=53.8 pTM=0.262 ipTM=0.141 tol=3.5
2024-12-08 21:25:36,209 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=53.9 pTM=0.261 ipTM=0.14 tol=3.78
2024-12-08 21:25:51,415 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=54 pTM=0.267 ipTM=0.141 tol=4.35
2024-12-08 21:26:06,635 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=54.3 pTM=0.267 ipTM=0.139 tol=2.99
2024-12-08 21:26:21,848 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=54.1 pTM=0.26 ipTM=0.138 tol=4.74
2024-12-08 21:26:37,064 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=54.3 pTM=0.262 ipTM=0.137 tol=3.2
2024-12-08 21:26:52,276 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=54.2 pTM=0.266 ipTM=0.141 tol=3.13
2024-12-08 21:27:07,486 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=54.4 pTM=0.266 ipTM=0.14 tol=2.91
2024-12-08 21:27:22,699 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=53.9 pTM=0.261 ipTM=0.14 tol=2.77
2024-12-08 21:27:37,903 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=54 pTM=0.263 ipTM=0.139 tol=2.74
2024-12-08 21:27:53,116 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=54.1 pTM=0.263 ipTM=0.139 tol=3.72
2024-12-08 21:28:08,344 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=53.9 pTM=0.257 ipTM=0.135 tol=4.14
2024-12-08 21:28:23,570 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=53.8 pTM=0.257 ipTM=0.137 tol=3.85
2024-12-08 21:28:38,796 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=53.7 pTM=0.255 ipTM=0.137 tol=3.43
2024-12-08 21:28:38,797 alphafold2_multimer_v3_model_2_seed_000 took 471.5s (30 recycles)
2024-12-08 21:28:54,495 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=52 pTM=0.276 ipTM=0.121
2024-12-08 21:29:09,700 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=53.2 pTM=0.27 ipTM=0.138 tol=20.9
2024-12-08 21:29:24,910 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=52.7 pTM=0.266 ipTM=0.137 tol=8.02
2024-12-08 21:29:40,097 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=52.9 pTM=0.266 ipTM=0.148 tol=5.7
2024-12-08 21:29:55,274 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=53.2 pTM=0.267 ipTM=0.168 tol=3.84
2024-12-08 21:30:10,459 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=53.2 pTM=0.267 ipTM=0.166 tol=3.38
2024-12-08 21:30:25,633 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=53.2 pTM=0.266 ipTM=0.181 tol=1.89
2024-12-08 21:30:40,795 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=53.3 pTM=0.264 ipTM=0.174 tol=1.59
2024-12-08 21:30:55,980 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=53.5 pTM=0.264 ipTM=0.166 tol=2.06
2024-12-08 21:31:11,151 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=53.5 pTM=0.268 ipTM=0.184 tol=1.65
2024-12-08 21:31:26,331 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=53.5 pTM=0.264 ipTM=0.175 tol=1.04
2024-12-08 21:31:41,500 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=53.9 pTM=0.273 ipTM=0.208 tol=1.74
2024-12-08 21:31:56,664 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=54.2 pTM=0.272 ipTM=0.202 tol=1.34
2024-12-08 21:32:11,831 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=53.9 pTM=0.273 ipTM=0.202 tol=2.54
2024-12-08 21:32:27,007 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=53.5 pTM=0.264 ipTM=0.189 tol=2.92
2024-12-08 21:32:42,173 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=53.8 pTM=0.27 ipTM=0.202 tol=3.91
2024-12-08 21:32:57,327 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=53.8 pTM=0.272 ipTM=0.2 tol=4.03
2024-12-08 21:33:12,491 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=53.9 pTM=0.274 ipTM=0.203 tol=1.93
2024-12-08 21:33:27,660 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=54.2 pTM=0.274 ipTM=0.203 tol=1.41
2024-12-08 21:33:42,815 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=54.2 pTM=0.274 ipTM=0.204 tol=1.33
2024-12-08 21:33:57,972 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=54.1 pTM=0.276 ipTM=0.207 tol=1.3
2024-12-08 21:34:13,136 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=54.3 pTM=0.279 ipTM=0.21 tol=0.956
2024-12-08 21:34:28,292 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=54.4 pTM=0.28 ipTM=0.208 tol=1.17
2024-12-08 21:34:43,457 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=54.5 pTM=0.278 ipTM=0.208 tol=1.22
2024-12-08 21:34:58,621 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=54.5 pTM=0.277 ipTM=0.203 tol=0.975
2024-12-08 21:35:13,772 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=54.4 pTM=0.275 ipTM=0.201 tol=1.19
2024-12-08 21:35:28,940 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=54.2 pTM=0.275 ipTM=0.194 tol=1.6
2024-12-08 21:35:44,099 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=54.4 pTM=0.28 ipTM=0.211 tol=1.58
2024-12-08 21:35:59,255 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=54.5 pTM=0.275 ipTM=0.202 tol=1.39
2024-12-08 21:36:14,436 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=54.5 pTM=0.272 ipTM=0.197 tol=1.4
2024-12-08 21:36:29,625 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=54.2 pTM=0.265 ipTM=0.18 tol=1.33
2024-12-08 21:36:29,626 alphafold2_multimer_v3_model_3_seed_000 took 470.4s (30 recycles)
2024-12-08 21:36:45,350 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=45.7 pTM=0.209 ipTM=0.123
2024-12-08 21:37:00,543 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=49.7 pTM=0.265 ipTM=0.212 tol=26.5
2024-12-08 21:37:15,719 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=52 pTM=0.265 ipTM=0.201 tol=22
2024-12-08 21:37:30,918 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=53.8 pTM=0.282 ipTM=0.192 tol=15.3
2024-12-08 21:37:46,134 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=53.3 pTM=0.273 ipTM=0.166 tol=8
2024-12-08 21:38:01,341 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=53.3 pTM=0.265 ipTM=0.167 tol=6.94
2024-12-08 21:38:16,558 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=52.9 pTM=0.258 ipTM=0.161 tol=5.98
2024-12-08 21:38:31,773 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=53.3 pTM=0.257 ipTM=0.162 tol=6.51
2024-12-08 21:38:46,985 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=53.6 pTM=0.253 ipTM=0.162 tol=4.5
2024-12-08 21:39:02,208 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=53.7 pTM=0.258 ipTM=0.162 tol=3.86
2024-12-08 21:39:17,409 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=53.7 pTM=0.252 ipTM=0.167 tol=4.5
2024-12-08 21:39:32,626 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=53.9 pTM=0.259 ipTM=0.163 tol=5.14
2024-12-08 21:39:47,841 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=53.6 pTM=0.257 ipTM=0.162 tol=5.89
2024-12-08 21:40:03,035 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=53.5 pTM=0.253 ipTM=0.166 tol=5.84
2024-12-08 21:40:18,253 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=52.9 pTM=0.259 ipTM=0.161 tol=5.29
2024-12-08 21:40:33,457 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=53.4 pTM=0.254 ipTM=0.164 tol=5.83
2024-12-08 21:40:48,658 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=53.4 pTM=0.256 ipTM=0.163 tol=6.95
2024-12-08 21:41:03,857 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=53.8 pTM=0.263 ipTM=0.165 tol=4.59
2024-12-08 21:41:19,053 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=53.2 pTM=0.251 ipTM=0.164 tol=5.18
2024-12-08 21:41:34,250 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=54 pTM=0.269 ipTM=0.185 tol=10.6
2024-12-08 21:41:49,449 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=53.8 pTM=0.267 ipTM=0.18 tol=5.23
2024-12-08 21:42:04,640 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=53.5 pTM=0.248 ipTM=0.169 tol=9.13
2024-12-08 21:42:19,833 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=53.4 pTM=0.252 ipTM=0.167 tol=6.07
2024-12-08 21:42:35,013 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=53.3 pTM=0.252 ipTM=0.167 tol=7.65
2024-12-08 21:42:50,213 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=53.5 pTM=0.258 ipTM=0.167 tol=5.7
2024-12-08 21:43:05,405 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=53.3 pTM=0.262 ipTM=0.165 tol=6.06
2024-12-08 21:43:20,600 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=53.2 pTM=0.256 ipTM=0.167 tol=4.48
2024-12-08 21:43:35,804 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=53.3 pTM=0.259 ipTM=0.165 tol=4.22
2024-12-08 21:43:51,011 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=53.4 pTM=0.259 ipTM=0.161 tol=4.65
2024-12-08 21:44:06,220 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=53.4 pTM=0.249 ipTM=0.165 tol=5.95
2024-12-08 21:44:21,428 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=53.3 pTM=0.254 ipTM=0.161 tol=5.12
2024-12-08 21:44:21,429 alphafold2_multimer_v3_model_4_seed_000 took 471.4s (30 recycles)
2024-12-08 21:44:37,038 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=50.5 pTM=0.273 ipTM=0.165
2024-12-08 21:44:52,220 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=51.4 pTM=0.268 ipTM=0.171 tol=10.9
2024-12-08 21:45:07,400 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=51.5 pTM=0.262 ipTM=0.18 tol=5.58
2024-12-08 21:45:22,580 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=51.9 pTM=0.262 ipTM=0.2 tol=4.69
2024-12-08 21:45:37,746 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=52.3 pTM=0.262 ipTM=0.188 tol=4.26
2024-12-08 21:45:52,890 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=52.5 pTM=0.267 ipTM=0.219 tol=3.77
2024-12-08 21:46:08,029 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=52.5 pTM=0.267 ipTM=0.205 tol=3.71
2024-12-08 21:46:23,176 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=52.5 pTM=0.268 ipTM=0.213 tol=3.72
2024-12-08 21:46:38,345 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=52.4 pTM=0.263 ipTM=0.197 tol=4
2024-12-08 21:46:53,510 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=53.2 pTM=0.278 ipTM=0.235 tol=2.29
2024-12-08 21:47:08,649 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=52.7 pTM=0.265 ipTM=0.205 tol=3.16
2024-12-08 21:47:23,796 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=53.2 pTM=0.27 ipTM=0.224 tol=2.66
2024-12-08 21:47:38,960 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=53 pTM=0.268 ipTM=0.208 tol=1.54
2024-12-08 21:47:54,127 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=53.3 pTM=0.277 ipTM=0.231 tol=2.76
2024-12-08 21:48:09,293 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=52.6 pTM=0.261 ipTM=0.203 tol=1.95
2024-12-08 21:48:24,449 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=53.1 pTM=0.269 ipTM=0.223 tol=3.47
2024-12-08 21:48:39,615 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=53 pTM=0.267 ipTM=0.213 tol=1.24
2024-12-08 21:48:54,778 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=53.2 pTM=0.273 ipTM=0.228 tol=2.83
2024-12-08 21:49:09,914 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=52.9 pTM=0.268 ipTM=0.211 tol=3.44
2024-12-08 21:49:25,059 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=53.6 pTM=0.279 ipTM=0.235 tol=2.02
2024-12-08 21:49:40,203 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=53.1 pTM=0.278 ipTM=0.215 tol=3.95
2024-12-08 21:49:55,334 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=53.5 pTM=0.281 ipTM=0.231 tol=3.51
2024-12-08 21:50:10,502 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=53.3 pTM=0.28 ipTM=0.225 tol=1.68
2024-12-08 21:50:25,642 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=53.3 pTM=0.275 ipTM=0.219 tol=4.15
2024-12-08 21:50:40,782 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=53.7 pTM=0.281 ipTM=0.237 tol=2.63
2024-12-08 21:50:55,922 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=53.4 pTM=0.276 ipTM=0.214 tol=1.98
2024-12-08 21:51:11,063 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=53.7 pTM=0.286 ipTM=0.249 tol=2
2024-12-08 21:51:26,218 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=53.3 pTM=0.281 ipTM=0.238 tol=1.77
2024-12-08 21:51:41,360 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=53.3 pTM=0.274 ipTM=0.226 tol=2.14
2024-12-08 21:51:56,495 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=53.2 pTM=0.273 ipTM=0.218 tol=2.05
2024-12-08 21:52:11,632 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=53.2 pTM=0.269 ipTM=0.215 tol=4
2024-12-08 21:52:11,633 alphafold2_multimer_v3_model_5_seed_000 took 469.8s (30 recycles)
2024-12-08 21:52:12,057 reranking models by 'multimer' metric
2024-12-08 21:52:12,916 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 21:53:01,310 Relaxation took 49.3s
2024-12-08 21:53:01,310 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=53.2 pTM=0.269 ipTM=0.215
2024-12-08 21:53:36,540 Relaxation took 35.2s
2024-12-08 21:53:36,541 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=56.7 pTM=0.275 ipTM=0.179
2024-12-08 21:54:20,736 Relaxation took 44.2s
2024-12-08 21:54:20,736 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=54.2 pTM=0.265 ipTM=0.18
2024-12-08 21:54:54,328 Relaxation took 33.6s
2024-12-08 21:54:54,328 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=53.3 pTM=0.254 ipTM=0.161
2024-12-08 21:55:39,123 Relaxation took 44.8s
2024-12-08 21:55:39,123 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=53.7 pTM=0.255 ipTM=0.137
2024-12-08 21:55:40,852 Done