2024-12-08 21:24:06,603 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 21:24:06,908 Running on GPU
2024-12-08 21:24:10,557 Found 6 citations for tools or databases
2024-12-08 21:24:10,558 Query 1/1: TRIM24_HORMAD2 (length 1357)
2024-12-08 21:24:10,844 Sleeping for 7s. Reason: PENDING
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2024-12-08 21:27:00,291 Sleeping for 9s. Reason: RUNNING
2024-12-08 21:27:09,547 Sleeping for 9s. Reason: RUNNING
2024-12-08 21:27:18,809 Sleeping for 9s. Reason: RUNNING
2024-12-08 21:27:28,074 Sleeping for 5s. Reason: RUNNING
2024-12-08 21:27:33,334 Sleeping for 6s. Reason: RUNNING
2024-12-08 21:27:39,592 Sleeping for 10s. Reason: RUNNING
2024-12-08 21:27:49,856 Sleeping for 10s. Reason: RUNNING
2024-12-08 21:28:01,830 Sleeping for 8s. Reason: PENDING
2024-12-08 21:28:10,087 Sleeping for 6s. Reason: RUNNING
2024-12-08 21:28:16,344 Sleeping for 10s. Reason: RUNNING
2024-12-08 21:28:26,605 Sleeping for 6s. Reason: RUNNING
2024-12-08 21:28:32,868 Sleeping for 10s. Reason: RUNNING
2024-12-08 21:28:43,129 Sleeping for 6s. Reason: RUNNING
2024-12-08 21:28:49,381 Sleeping for 10s. Reason: RUNNING
2024-12-08 21:28:59,641 Sleeping for 6s. Reason: RUNNING
2024-12-08 21:29:05,908 Sleeping for 6s. Reason: RUNNING
2024-12-08 21:29:12,161 Sleeping for 8s. Reason: RUNNING
2024-12-08 21:29:20,419 Sleeping for 8s. Reason: RUNNING
2024-12-08 21:29:28,674 Sleeping for 8s. Reason: RUNNING
2024-12-08 21:29:36,940 Sleeping for 8s. Reason: RUNNING
2024-12-08 21:29:45,206 Sleeping for 6s. Reason: RUNNING
2024-12-08 21:29:51,472 Sleeping for 5s. Reason: RUNNING
2024-12-08 21:29:56,729 Sleeping for 8s. Reason: RUNNING
2024-12-08 21:30:04,985 Sleeping for 8s. Reason: RUNNING
2024-12-08 21:30:18,496 Setting max_seq=508, max_extra_seq=2048
2024-12-08 21:33:58,956 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=49 pTM=0.312 ipTM=0.431
2024-12-08 21:34:48,470 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=49.5 pTM=0.307 ipTM=0.569 tol=11.9
2024-12-08 21:35:38,192 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=47.8 pTM=0.3 ipTM=0.412 tol=9.78
2024-12-08 21:36:27,998 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=49 pTM=0.304 ipTM=0.422 tol=10.2
2024-12-08 21:37:17,901 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=51 pTM=0.304 ipTM=0.577 tol=21.9
2024-12-08 21:38:07,783 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=51.3 pTM=0.299 ipTM=0.465 tol=7.93
2024-12-08 21:38:57,649 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=51.6 pTM=0.304 ipTM=0.552 tol=4.82
2024-12-08 21:39:47,513 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=51.9 pTM=0.305 ipTM=0.597 tol=3.29
2024-12-08 21:40:37,420 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=51.3 pTM=0.301 ipTM=0.463 tol=3.45
2024-12-08 21:41:27,326 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=51.5 pTM=0.303 ipTM=0.509 tol=4.7
2024-12-08 21:42:17,245 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=51.9 pTM=0.302 ipTM=0.561 tol=3.7
2024-12-08 21:43:07,187 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=51.4 pTM=0.299 ipTM=0.436 tol=3.59
2024-12-08 21:43:57,137 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=51.6 pTM=0.303 ipTM=0.478 tol=3.6
2024-12-08 21:44:47,092 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=51.4 pTM=0.297 ipTM=0.368 tol=3.44
2024-12-08 21:45:37,047 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=51.5 pTM=0.303 ipTM=0.454 tol=3.27
2024-12-08 21:46:27,004 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=51.7 pTM=0.307 ipTM=0.523 tol=2.87
2024-12-08 21:47:16,967 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=51.9 pTM=0.306 ipTM=0.473 tol=2.12
2024-12-08 21:48:06,970 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=51.5 pTM=0.3 ipTM=0.447 tol=3.96
2024-12-08 21:48:56,910 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=51.6 pTM=0.301 ipTM=0.478 tol=3.36
2024-12-08 21:49:46,882 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=51.9 pTM=0.301 ipTM=0.58 tol=4.09
2024-12-08 21:50:36,781 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=51.8 pTM=0.305 ipTM=0.503 tol=2.58
2024-12-08 21:51:26,695 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=51.8 pTM=0.304 ipTM=0.424 tol=3.53
2024-12-08 21:52:16,638 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=51.5 pTM=0.301 ipTM=0.436 tol=2.73
2024-12-08 21:53:06,622 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=51.7 pTM=0.304 ipTM=0.437 tol=5.06
2024-12-08 21:53:56,632 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=51.7 pTM=0.302 ipTM=0.468 tol=5.43
2024-12-08 21:54:46,629 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=51.6 pTM=0.301 ipTM=0.379 tol=3.52
2024-12-08 21:55:36,613 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=51.7 pTM=0.304 ipTM=0.468 tol=2.39
2024-12-08 21:56:26,590 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=51.7 pTM=0.303 ipTM=0.393 tol=2.15
2024-12-08 21:57:16,582 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=51.7 pTM=0.305 ipTM=0.421 tol=2.2
2024-12-08 21:58:06,572 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=51.5 pTM=0.303 ipTM=0.462 tol=2.12
2024-12-08 21:58:56,591 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=51.7 pTM=0.305 ipTM=0.479 tol=3.07
2024-12-08 21:58:56,592 alphafold2_multimer_v3_model_1_seed_000 took 1713.1s (30 recycles)
2024-12-08 21:59:47,715 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=47.9 pTM=0.301 ipTM=0.583
2024-12-08 22:00:37,735 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=49.8 pTM=0.304 ipTM=0.513 tol=26
2024-12-08 22:01:27,717 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=51.5 pTM=0.298 ipTM=0.571 tol=11.6
2024-12-08 22:02:17,733 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=51.6 pTM=0.298 ipTM=0.55 tol=10.8
2024-12-08 22:03:07,753 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=51.8 pTM=0.303 ipTM=0.503 tol=10.1
2024-12-08 22:03:57,797 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=51.8 pTM=0.302 ipTM=0.421 tol=7.9
2024-12-08 22:04:47,826 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=51.8 pTM=0.3 ipTM=0.409 tol=4.18
2024-12-08 22:05:37,917 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=52 pTM=0.299 ipTM=0.397 tol=5.89
2024-12-08 22:06:28,005 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=51.8 pTM=0.299 ipTM=0.34 tol=4.66
2024-12-08 22:07:18,085 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=51.8 pTM=0.3 ipTM=0.408 tol=5.53
2024-12-08 22:08:08,169 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=51.9 pTM=0.299 ipTM=0.404 tol=5.05
2024-12-08 22:08:58,243 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=51.8 pTM=0.296 ipTM=0.418 tol=3.6
2024-12-08 22:09:48,302 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=52 pTM=0.302 ipTM=0.52 tol=2.66
2024-12-08 22:10:38,348 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=51.9 pTM=0.298 ipTM=0.39 tol=2.53
2024-12-08 22:11:28,386 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=51.7 pTM=0.299 ipTM=0.362 tol=2.52
2024-12-08 22:12:18,408 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=52 pTM=0.299 ipTM=0.454 tol=3.23
2024-12-08 22:13:08,427 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=52.1 pTM=0.302 ipTM=0.422 tol=3.46
2024-12-08 22:13:58,434 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=51.9 pTM=0.299 ipTM=0.472 tol=3.08
2024-12-08 22:14:48,444 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=52.3 pTM=0.306 ipTM=0.583 tol=2.73
2024-12-08 22:15:38,479 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=52.1 pTM=0.299 ipTM=0.475 tol=3.92
2024-12-08 22:16:28,487 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=52.1 pTM=0.306 ipTM=0.527 tol=3.8
2024-12-08 22:17:18,555 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=51.8 pTM=0.301 ipTM=0.353 tol=2.29
2024-12-08 22:18:08,615 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=52.1 pTM=0.304 ipTM=0.521 tol=2.65
2024-12-08 22:18:58,685 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=52.2 pTM=0.304 ipTM=0.5 tol=4.73
2024-12-08 22:19:48,749 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=51.9 pTM=0.302 ipTM=0.354 tol=4.48
2024-12-08 22:20:38,764 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=51.9 pTM=0.3 ipTM=0.41 tol=2.94
2024-12-08 22:21:28,759 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=52.4 pTM=0.309 ipTM=0.493 tol=2.23
2024-12-08 22:22:18,735 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=52 pTM=0.301 ipTM=0.391 tol=6.33
2024-12-08 22:23:08,712 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=51.8 pTM=0.299 ipTM=0.507 tol=6.05
2024-12-08 22:23:58,697 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=52.1 pTM=0.305 ipTM=0.536 tol=3.29
2024-12-08 22:24:48,719 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=52 pTM=0.299 ipTM=0.427 tol=2.65
2024-12-08 22:24:48,720 alphafold2_multimer_v3_model_2_seed_000 took 1551.0s (30 recycles)
2024-12-08 22:25:39,977 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=48.8 pTM=0.294 ipTM=0.393
2024-12-08 22:26:30,065 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=50.4 pTM=0.299 ipTM=0.333 tol=32.5
2024-12-08 22:27:20,116 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=51.4 pTM=0.306 ipTM=0.47 tol=10.5
2024-12-08 22:28:10,141 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=51.5 pTM=0.31 ipTM=0.565 tol=8.92
2024-12-08 22:29:00,144 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=51.7 pTM=0.312 ipTM=0.391 tol=6.02
2024-12-08 22:29:50,130 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=51.4 pTM=0.305 ipTM=0.316 tol=7.38
2024-12-08 22:30:40,165 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=51.3 pTM=0.309 ipTM=0.345 tol=7.47
2024-12-08 22:31:30,240 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=51.2 pTM=0.301 ipTM=0.323 tol=8.9
2024-12-08 22:32:20,278 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=51.2 pTM=0.304 ipTM=0.351 tol=7.63
2024-12-08 22:33:10,337 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=51.3 pTM=0.3 ipTM=0.334 tol=3.57
2024-12-08 22:34:00,404 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=51.3 pTM=0.306 ipTM=0.348 tol=2.93
2024-12-08 22:34:50,493 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=51.4 pTM=0.3 ipTM=0.316 tol=2.97
2024-12-08 22:35:40,583 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=51.4 pTM=0.306 ipTM=0.363 tol=3.05
2024-12-08 22:36:30,640 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=51.4 pTM=0.301 ipTM=0.34 tol=4.91
2024-12-08 22:37:20,731 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=51.2 pTM=0.302 ipTM=0.343 tol=4.51
2024-12-08 22:38:10,820 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=51.3 pTM=0.299 ipTM=0.368 tol=4.34
2024-12-08 22:39:00,881 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=51.5 pTM=0.304 ipTM=0.372 tol=2.72
2024-12-08 22:39:50,948 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=51.3 pTM=0.3 ipTM=0.342 tol=3.3
2024-12-08 22:40:41,021 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=51.7 pTM=0.307 ipTM=0.569 tol=4.39
2024-12-08 22:41:31,108 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=51.4 pTM=0.299 ipTM=0.338 tol=4.35
2024-12-08 22:42:21,184 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=51.4 pTM=0.303 ipTM=0.344 tol=3.89
2024-12-08 22:43:11,270 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=51.2 pTM=0.299 ipTM=0.373 tol=3.94
2024-12-08 22:44:01,369 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=51.3 pTM=0.3 ipTM=0.345 tol=3.87
2024-12-08 22:44:51,462 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=51.3 pTM=0.3 ipTM=0.372 tol=4.36
2024-12-08 22:45:41,556 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=51.3 pTM=0.302 ipTM=0.378 tol=4.18
2024-12-08 22:46:31,677 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=51.3 pTM=0.298 ipTM=0.426 tol=3.04
2024-12-08 22:47:21,798 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=51.5 pTM=0.307 ipTM=0.467 tol=2.68
2024-12-08 22:48:11,903 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=51.4 pTM=0.299 ipTM=0.331 tol=2.94
2024-12-08 22:49:01,978 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=51.3 pTM=0.303 ipTM=0.362 tol=3.51
2024-12-08 22:49:52,038 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=51.3 pTM=0.298 ipTM=0.314 tol=3.06
2024-12-08 22:50:42,120 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=51.3 pTM=0.303 ipTM=0.359 tol=1.87
2024-12-08 22:50:42,121 alphafold2_multimer_v3_model_3_seed_000 took 1552.3s (30 recycles)
2024-12-08 22:51:33,215 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=47.8 pTM=0.317 ipTM=0.519
2024-12-08 22:52:23,374 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=48.3 pTM=0.299 ipTM=0.453 tol=17.5
2024-12-08 22:53:13,433 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=47.5 pTM=0.309 ipTM=0.57 tol=22.1
2024-12-08 22:54:03,529 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=47 pTM=0.298 ipTM=0.362 tol=17
2024-12-08 22:54:53,600 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=47.1 pTM=0.297 ipTM=0.3 tol=15
2024-12-08 22:55:43,699 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=46.7 pTM=0.302 ipTM=0.478 tol=10.6
2024-12-08 22:56:33,784 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=47.2 pTM=0.302 ipTM=0.338 tol=6.21
2024-12-08 22:57:23,863 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=47.7 pTM=0.299 ipTM=0.356 tol=6.48
2024-12-08 22:58:14,135 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=48 pTM=0.292 ipTM=0.359 tol=20.8
2024-12-08 22:59:04,301 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=49.9 pTM=0.297 ipTM=0.447 tol=10.5
2024-12-08 22:59:54,434 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=49.9 pTM=0.295 ipTM=0.307 tol=4.95
2024-12-08 23:00:44,570 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=49.8 pTM=0.294 ipTM=0.299 tol=5.31
2024-12-08 23:01:34,673 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=50.2 pTM=0.303 ipTM=0.53 tol=2.55
2024-12-08 23:02:24,827 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=49.8 pTM=0.297 ipTM=0.292 tol=3.12
2024-12-08 23:03:14,980 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=49.8 pTM=0.297 ipTM=0.287 tol=3.68
2024-12-08 23:04:05,098 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=49.5 pTM=0.301 ipTM=0.353 tol=5.03
2024-12-08 23:04:55,224 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=49.8 pTM=0.296 ipTM=0.36 tol=5.3
2024-12-08 23:05:45,344 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=49.5 pTM=0.296 ipTM=0.313 tol=5
2024-12-08 23:06:35,449 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=49.6 pTM=0.298 ipTM=0.385 tol=4.99
2024-12-08 23:07:25,549 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=50 pTM=0.3 ipTM=0.517 tol=5.47
2024-12-08 23:08:15,639 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=49.9 pTM=0.3 ipTM=0.319 tol=6.16
2024-12-08 23:09:05,705 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=49.7 pTM=0.304 ipTM=0.385 tol=4.78
2024-12-08 23:09:55,758 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=49.4 pTM=0.307 ipTM=0.296 tol=7.46
2024-12-08 23:10:45,808 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=49.6 pTM=0.308 ipTM=0.321 tol=4.33
2024-12-08 23:11:35,882 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=49.7 pTM=0.309 ipTM=0.48 tol=3.71
2024-12-08 23:12:25,958 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=49.6 pTM=0.3 ipTM=0.32 tol=5.81
2024-12-08 23:13:16,031 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=49.5 pTM=0.304 ipTM=0.318 tol=5.38
2024-12-08 23:14:06,137 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=49.6 pTM=0.302 ipTM=0.311 tol=4.4
2024-12-08 23:14:56,235 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=49.6 pTM=0.308 ipTM=0.407 tol=3.21
2024-12-08 23:15:46,359 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=49.3 pTM=0.3 ipTM=0.346 tol=5.57
2024-12-08 23:16:36,477 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=49.8 pTM=0.307 ipTM=0.33 tol=4.66
2024-12-08 23:16:36,479 alphafold2_multimer_v3_model_4_seed_000 took 1553.3s (30 recycles)
2024-12-08 23:17:27,735 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=47.9 pTM=0.294 ipTM=0.56
2024-12-08 23:18:17,848 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=49.8 pTM=0.304 ipTM=0.628 tol=28.7
2024-12-08 23:19:08,015 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=50.4 pTM=0.293 ipTM=0.414 tol=16
2024-12-08 23:19:58,144 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=50 pTM=0.296 ipTM=0.496 tol=9.93
2024-12-08 23:20:48,296 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=50.2 pTM=0.303 ipTM=0.573 tol=11
2024-12-08 23:21:38,507 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=50.2 pTM=0.296 ipTM=0.405 tol=15.3
2024-12-08 23:22:28,695 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=50.8 pTM=0.301 ipTM=0.392 tol=11.9
2024-12-08 23:23:18,872 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=50.9 pTM=0.301 ipTM=0.467 tol=8.32
2024-12-08 23:24:09,022 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=50.6 pTM=0.302 ipTM=0.347 tol=7.25
2024-12-08 23:24:59,172 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=50.6 pTM=0.304 ipTM=0.467 tol=7.23
2024-12-08 23:25:49,308 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=50.4 pTM=0.302 ipTM=0.345 tol=8.45
2024-12-08 23:26:39,407 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=50.6 pTM=0.304 ipTM=0.346 tol=7.6
2024-12-08 23:27:29,473 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=50.7 pTM=0.302 ipTM=0.364 tol=4.89
2024-12-08 23:28:19,549 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=50.6 pTM=0.303 ipTM=0.331 tol=6.8
2024-12-08 23:29:09,646 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=50.6 pTM=0.305 ipTM=0.346 tol=3.69
2024-12-08 23:29:59,721 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=51 pTM=0.313 ipTM=0.541 tol=3.52
2024-12-08 23:30:49,809 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=50.8 pTM=0.306 ipTM=0.355 tol=3.5
2024-12-08 23:31:39,909 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=50.7 pTM=0.305 ipTM=0.387 tol=4.18
2024-12-08 23:32:29,974 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=50.7 pTM=0.309 ipTM=0.363 tol=3.22
2024-12-08 23:33:20,026 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=50.7 pTM=0.303 ipTM=0.341 tol=4.1
2024-12-08 23:34:10,072 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=50.6 pTM=0.304 ipTM=0.415 tol=5.43
2024-12-08 23:35:00,145 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=50.4 pTM=0.304 ipTM=0.341 tol=4.79
2024-12-08 23:35:50,224 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=50.7 pTM=0.307 ipTM=0.465 tol=3.16
2024-12-08 23:36:40,290 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=50.5 pTM=0.306 ipTM=0.41 tol=2.7
2024-12-08 23:37:30,373 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=50.4 pTM=0.304 ipTM=0.34 tol=1.91
2024-12-08 23:38:20,478 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=50.7 pTM=0.302 ipTM=0.322 tol=1.85
2024-12-08 23:39:10,557 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=50.6 pTM=0.305 ipTM=0.436 tol=3
2024-12-08 23:40:00,625 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=50.7 pTM=0.307 ipTM=0.458 tol=5.12
2024-12-08 23:40:50,708 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=50.7 pTM=0.303 ipTM=0.323 tol=6.07
2024-12-08 23:41:40,774 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=50.7 pTM=0.307 ipTM=0.439 tol=5.22
2024-12-08 23:42:30,841 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=50.5 pTM=0.304 ipTM=0.324 tol=5.46
2024-12-08 23:42:30,843 alphafold2_multimer_v3_model_5_seed_000 took 1553.3s (30 recycles)
2024-12-08 23:42:31,933 reranking models by 'multimer' metric
2024-12-08 23:42:35,759 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 23:45:34,974 Relaxation took 183.0s
2024-12-08 23:45:34,975 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=51.7 pTM=0.305 ipTM=0.479
2024-12-08 23:48:29,042 Relaxation took 174.1s
2024-12-08 23:48:29,043 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=52 pTM=0.299 ipTM=0.427
2024-12-08 23:50:39,933 Relaxation took 130.9s
2024-12-08 23:50:39,934 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=51.3 pTM=0.303 ipTM=0.359
2024-12-08 23:53:15,247 Relaxation took 155.3s
2024-12-08 23:53:15,248 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=49.8 pTM=0.307 ipTM=0.33
2024-12-08 23:55:40,825 Relaxation took 145.6s
2024-12-08 23:55:40,825 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=50.5 pTM=0.304 ipTM=0.324
2024-12-08 23:55:43,599 Done