2024-12-08 21:25:27,386 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 21:25:27,691 Running on GPU
2024-12-08 21:25:29,396 Found 6 citations for tools or databases
2024-12-08 21:25:29,396 Query 1/1: TRIM24_KRT38 (length 1506)
2024-12-08 21:25:29,678 Sleeping for 5s. Reason: PENDING
2024-12-08 21:25:34,938 Sleeping for 7s. Reason: RUNNING
2024-12-08 21:25:42,203 Sleeping for 8s. Reason: RUNNING
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2024-12-08 21:26:42,281 Sleeping for 9s. Reason: RUNNING
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2024-12-08 21:28:05,152 Sleeping for 6s. Reason: RUNNING
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2024-12-08 21:28:21,669 Sleeping for 10s. Reason: RUNNING
2024-12-08 21:28:31,928 Sleeping for 6s. Reason: RUNNING
2024-12-08 21:28:38,182 Sleeping for 7s. Reason: RUNNING
2024-12-08 21:28:45,436 Sleeping for 6s. Reason: RUNNING
2024-12-08 21:28:51,687 Sleeping for 10s. Reason: RUNNING
2024-12-08 21:29:01,953 Sleeping for 7s. Reason: RUNNING
2024-12-08 21:29:09,212 Sleeping for 7s. Reason: RUNNING
2024-12-08 21:29:16,477 Sleeping for 7s. Reason: RUNNING
2024-12-08 21:29:23,733 Sleeping for 9s. Reason: RUNNING
2024-12-08 21:29:38,485 Sleeping for 10s. Reason: PENDING
2024-12-08 21:29:48,748 Sleeping for 6s. Reason: PENDING
2024-12-08 21:29:55,001 Sleeping for 6s. Reason: PENDING
2024-12-08 21:30:01,281 Sleeping for 5s. Reason: RUNNING
2024-12-08 21:30:06,535 Sleeping for 8s. Reason: RUNNING
2024-12-08 21:30:14,791 Sleeping for 8s. Reason: RUNNING
2024-12-08 21:30:23,049 Sleeping for 5s. Reason: RUNNING
2024-12-08 21:30:28,302 Sleeping for 9s. Reason: RUNNING
2024-12-08 21:30:37,564 Sleeping for 6s. Reason: RUNNING
2024-12-08 21:30:43,829 Sleeping for 9s. Reason: RUNNING
2024-12-08 21:30:53,089 Sleeping for 9s. Reason: RUNNING
2024-12-08 21:31:02,351 Sleeping for 10s. Reason: RUNNING
2024-12-08 21:31:12,610 Sleeping for 10s. Reason: RUNNING
2024-12-08 21:31:22,891 Sleeping for 6s. Reason: RUNNING
2024-12-08 21:31:29,158 Sleeping for 6s. Reason: RUNNING
2024-12-08 21:31:35,414 Sleeping for 10s. Reason: RUNNING
2024-12-08 21:31:45,686 Sleeping for 6s. Reason: RUNNING
2024-12-08 21:31:51,942 Sleeping for 9s. Reason: RUNNING
2024-12-08 21:32:01,200 Sleeping for 8s. Reason: RUNNING
2024-12-08 21:32:09,454 Sleeping for 5s. Reason: RUNNING
2024-12-08 21:32:14,713 Sleeping for 5s. Reason: RUNNING
2024-12-08 21:32:25,818 Setting max_seq=508, max_extra_seq=2048
2024-12-08 21:36:02,573 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=46.2 pTM=0.308 ipTM=0.185
2024-12-08 21:37:08,616 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=46.3 pTM=0.32 ipTM=0.219 tol=19.6
2024-12-08 21:38:14,766 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=44.6 pTM=0.309 ipTM=0.202 tol=14.2
2024-12-08 21:39:20,990 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=45.3 pTM=0.311 ipTM=0.213 tol=11.6
2024-12-08 21:40:27,190 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=44.3 pTM=0.302 ipTM=0.205 tol=13.4
2024-12-08 21:41:33,492 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=45 pTM=0.306 ipTM=0.203 tol=10.9
2024-12-08 21:42:39,978 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=46.4 pTM=0.278 ipTM=0.191 tol=24.5
2024-12-08 21:43:46,360 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=47.4 pTM=0.287 ipTM=0.198 tol=15
2024-12-08 21:44:52,698 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=47.7 pTM=0.291 ipTM=0.202 tol=9.04
2024-12-08 21:45:59,080 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=47.6 pTM=0.287 ipTM=0.196 tol=9.66
2024-12-08 21:47:05,444 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=48 pTM=0.289 ipTM=0.197 tol=7.21
2024-12-08 21:48:11,809 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=47.7 pTM=0.286 ipTM=0.193 tol=4.75
2024-12-08 21:49:18,196 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=47.6 pTM=0.286 ipTM=0.192 tol=4.23
2024-12-08 21:50:24,494 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=47.7 pTM=0.285 ipTM=0.192 tol=7.96
2024-12-08 21:51:30,827 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=47.7 pTM=0.285 ipTM=0.194 tol=5.92
2024-12-08 21:52:37,229 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=47.6 pTM=0.286 ipTM=0.191 tol=7.15
2024-12-08 21:53:43,643 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=47.6 pTM=0.287 ipTM=0.196 tol=5.85
2024-12-08 21:54:49,997 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=46.7 pTM=0.288 ipTM=0.196 tol=17.9
2024-12-08 21:55:56,352 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=47.3 pTM=0.288 ipTM=0.195 tol=13.9
2024-12-08 21:57:02,678 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=47.5 pTM=0.288 ipTM=0.196 tol=10.2
2024-12-08 21:58:09,008 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=47.5 pTM=0.285 ipTM=0.19 tol=8.48
2024-12-08 21:59:15,320 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=47.9 pTM=0.286 ipTM=0.195 tol=10.3
2024-12-08 22:00:21,611 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=47.5 pTM=0.285 ipTM=0.19 tol=8.36
2024-12-08 22:01:27,906 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=47.6 pTM=0.286 ipTM=0.194 tol=7.53
2024-12-08 22:02:34,185 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=47.6 pTM=0.285 ipTM=0.191 tol=4.26
2024-12-08 22:03:40,496 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=47.8 pTM=0.287 ipTM=0.197 tol=3.46
2024-12-08 22:04:46,829 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=47.9 pTM=0.286 ipTM=0.19 tol=5.14
2024-12-08 22:05:53,167 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=47.9 pTM=0.288 ipTM=0.194 tol=9.16
2024-12-08 22:06:59,514 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=47.8 pTM=0.289 ipTM=0.197 tol=10.2
2024-12-08 22:08:05,829 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=47.8 pTM=0.288 ipTM=0.197 tol=4.59
2024-12-08 22:09:12,139 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=47.7 pTM=0.287 ipTM=0.196 tol=3.99
2024-12-08 22:09:12,140 alphafold2_multimer_v3_model_1_seed_000 took 2202.6s (30 recycles)
2024-12-08 22:10:20,071 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=45.6 pTM=0.251 ipTM=0.155
2024-12-08 22:11:26,582 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=46.9 pTM=0.255 ipTM=0.153 tol=34.4
2024-12-08 22:12:33,053 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=48.3 pTM=0.272 ipTM=0.153 tol=15.2
2024-12-08 22:13:39,505 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=48.5 pTM=0.271 ipTM=0.153 tol=12.7
2024-12-08 22:14:45,959 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=48.5 pTM=0.27 ipTM=0.155 tol=11.1
2024-12-08 22:15:52,462 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=48.7 pTM=0.273 ipTM=0.156 tol=7.16
2024-12-08 22:16:58,993 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=48.6 pTM=0.271 ipTM=0.158 tol=9.55
2024-12-08 22:18:05,521 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=48.8 pTM=0.268 ipTM=0.156 tol=11.3
2024-12-08 22:19:12,023 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=48.9 pTM=0.271 ipTM=0.156 tol=7.39
2024-12-08 22:20:18,515 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=48.8 pTM=0.271 ipTM=0.157 tol=8.62
2024-12-08 22:21:24,978 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=49.1 pTM=0.272 ipTM=0.157 tol=8.59
2024-12-08 22:22:31,415 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=48.8 pTM=0.272 ipTM=0.158 tol=5.03
2024-12-08 22:23:37,853 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=48.7 pTM=0.274 ipTM=0.16 tol=4.73
2024-12-08 22:24:44,349 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=48.8 pTM=0.274 ipTM=0.16 tol=7.01
2024-12-08 22:25:50,782 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=49 pTM=0.274 ipTM=0.16 tol=6.68
2024-12-08 22:26:57,204 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=49 pTM=0.274 ipTM=0.159 tol=6.42
2024-12-08 22:28:03,646 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=49.1 pTM=0.275 ipTM=0.159 tol=5.85
2024-12-08 22:29:10,055 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=49.1 pTM=0.273 ipTM=0.159 tol=6.88
2024-12-08 22:30:16,464 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=48.9 pTM=0.274 ipTM=0.16 tol=5.08
2024-12-08 22:31:22,912 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=48.7 pTM=0.274 ipTM=0.157 tol=4.38
2024-12-08 22:32:29,427 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=48.4 pTM=0.271 ipTM=0.157 tol=6.96
2024-12-08 22:33:35,948 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=48.2 pTM=0.269 ipTM=0.16 tol=9.88
2024-12-08 22:34:42,462 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=48 pTM=0.271 ipTM=0.162 tol=10.1
2024-12-08 22:35:48,946 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=48 pTM=0.276 ipTM=0.173 tol=11.4
2024-12-08 22:36:55,389 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=48 pTM=0.276 ipTM=0.171 tol=10.9
2024-12-08 22:38:01,846 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=48 pTM=0.275 ipTM=0.169 tol=8.62
2024-12-08 22:39:08,275 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=48.1 pTM=0.274 ipTM=0.164 tol=8.28
2024-12-08 22:40:14,718 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=48.3 pTM=0.274 ipTM=0.164 tol=8.23
2024-12-08 22:41:21,135 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=48.3 pTM=0.274 ipTM=0.163 tol=6.71
2024-12-08 22:42:27,556 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=48.1 pTM=0.273 ipTM=0.163 tol=8.03
2024-12-08 22:43:33,978 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=48.3 pTM=0.274 ipTM=0.163 tol=8.39
2024-12-08 22:43:33,979 alphafold2_multimer_v3_model_2_seed_000 took 2060.5s (30 recycles)
2024-12-08 22:44:41,955 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=43.6 pTM=0.252 ipTM=0.178
2024-12-08 22:45:48,587 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=46 pTM=0.264 ipTM=0.174 tol=40.5
2024-12-08 22:46:55,219 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=46.8 pTM=0.284 ipTM=0.177 tol=16.4
2024-12-08 22:48:01,860 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=46.8 pTM=0.29 ipTM=0.186 tol=10.6
2024-12-08 22:49:08,491 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=46.8 pTM=0.287 ipTM=0.18 tol=7.21
2024-12-08 22:50:15,076 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=46.9 pTM=0.291 ipTM=0.187 tol=9
2024-12-08 22:51:21,619 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=46.8 pTM=0.29 ipTM=0.184 tol=8.65
2024-12-08 22:52:28,192 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=46.8 pTM=0.289 ipTM=0.183 tol=5.91
2024-12-08 22:53:34,760 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=46.9 pTM=0.292 ipTM=0.191 tol=9.76
2024-12-08 22:54:41,330 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=46.7 pTM=0.291 ipTM=0.19 tol=9.83
2024-12-08 22:55:47,887 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=47.2 pTM=0.291 ipTM=0.19 tol=5.16
2024-12-08 22:56:54,436 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=47 pTM=0.291 ipTM=0.186 tol=4.97
2024-12-08 22:58:01,019 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=47 pTM=0.292 ipTM=0.193 tol=4.82
2024-12-08 22:59:07,613 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=47.2 pTM=0.291 ipTM=0.189 tol=4.74
2024-12-08 23:00:14,171 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=47.5 pTM=0.294 ipTM=0.194 tol=3.3
2024-12-08 23:01:20,748 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=47.2 pTM=0.291 ipTM=0.191 tol=2.54
2024-12-08 23:02:27,317 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=47.4 pTM=0.292 ipTM=0.191 tol=3.13
2024-12-08 23:03:33,872 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=47.8 pTM=0.293 ipTM=0.193 tol=2.74
2024-12-08 23:04:40,445 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=47.7 pTM=0.292 ipTM=0.192 tol=3.73
2024-12-08 23:05:47,010 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=47.5 pTM=0.294 ipTM=0.195 tol=3.12
2024-12-08 23:06:53,586 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=47.6 pTM=0.292 ipTM=0.198 tol=3.31
2024-12-08 23:08:00,158 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=47.6 pTM=0.29 ipTM=0.194 tol=4.65
2024-12-08 23:09:06,757 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=47.4 pTM=0.288 ipTM=0.188 tol=6.49
2024-12-08 23:10:13,325 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=47.4 pTM=0.292 ipTM=0.198 tol=6.73
2024-12-08 23:11:19,946 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=47.5 pTM=0.291 ipTM=0.193 tol=4.91
2024-12-08 23:12:26,529 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=47.6 pTM=0.291 ipTM=0.194 tol=4.41
2024-12-08 23:13:33,093 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=47.6 pTM=0.29 ipTM=0.192 tol=3.61
2024-12-08 23:14:39,648 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=47.6 pTM=0.29 ipTM=0.189 tol=3.26
2024-12-08 23:15:46,208 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=47.7 pTM=0.291 ipTM=0.19 tol=3.76
2024-12-08 23:16:52,763 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=47.5 pTM=0.29 ipTM=0.188 tol=2.86
2024-12-08 23:17:59,310 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=47.5 pTM=0.289 ipTM=0.187 tol=3.44
2024-12-08 23:17:59,311 alphafold2_multimer_v3_model_3_seed_000 took 2064.0s (30 recycles)
2024-12-08 23:19:07,381 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=43.2 pTM=0.305 ipTM=0.196
2024-12-08 23:20:14,282 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=42.1 pTM=0.25 ipTM=0.148 tol=34.4
2024-12-08 23:21:21,260 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=42.3 pTM=0.251 ipTM=0.146 tol=28.8
2024-12-08 23:22:28,126 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=43.1 pTM=0.255 ipTM=0.149 tol=24.8
2024-12-08 23:23:34,961 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=43.2 pTM=0.262 ipTM=0.148 tol=14.4
2024-12-08 23:24:41,766 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=43.8 pTM=0.264 ipTM=0.149 tol=11.8
2024-12-08 23:25:48,534 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=43.8 pTM=0.266 ipTM=0.148 tol=7.98
2024-12-08 23:26:55,294 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=44 pTM=0.264 ipTM=0.148 tol=6.4
2024-12-08 23:28:02,027 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=43.9 pTM=0.266 ipTM=0.148 tol=9.77
2024-12-08 23:29:08,775 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=43.9 pTM=0.266 ipTM=0.151 tol=7.4
2024-12-08 23:30:15,551 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=44.1 pTM=0.265 ipTM=0.152 tol=9.63
2024-12-08 23:31:22,280 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=43.7 pTM=0.266 ipTM=0.152 tol=11.4
2024-12-08 23:32:29,040 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=43.4 pTM=0.264 ipTM=0.149 tol=6.74
2024-12-08 23:33:35,754 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=43.5 pTM=0.266 ipTM=0.156 tol=5.68
2024-12-08 23:34:42,490 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=43.5 pTM=0.265 ipTM=0.153 tol=4.11
2024-12-08 23:35:49,215 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=43.2 pTM=0.265 ipTM=0.153 tol=3.76
2024-12-08 23:36:56,006 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=42.9 pTM=0.262 ipTM=0.152 tol=6.14
2024-12-08 23:38:02,734 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=43.3 pTM=0.267 ipTM=0.157 tol=6.73
2024-12-08 23:39:09,597 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=43 pTM=0.268 ipTM=0.151 tol=19
2024-12-08 23:40:16,316 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=43.1 pTM=0.267 ipTM=0.15 tol=13.2
2024-12-08 23:41:23,068 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=43.2 pTM=0.266 ipTM=0.15 tol=11.5
2024-12-08 23:42:29,847 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=43.1 pTM=0.265 ipTM=0.148 tol=7.51
2024-12-08 23:43:36,632 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=42.8 pTM=0.264 ipTM=0.148 tol=8
2024-12-08 23:44:43,368 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=42.8 pTM=0.266 ipTM=0.152 tol=11.2
2024-12-08 23:45:50,195 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=42.3 pTM=0.262 ipTM=0.15 tol=8.2
2024-12-08 23:46:56,977 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=42.7 pTM=0.265 ipTM=0.154 tol=7.69
2024-12-08 23:48:03,760 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=42.7 pTM=0.263 ipTM=0.155 tol=6.5
2024-12-08 23:49:10,580 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=43.1 pTM=0.267 ipTM=0.153 tol=5.22
2024-12-08 23:50:17,393 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=43 pTM=0.266 ipTM=0.151 tol=7.04
2024-12-08 23:51:24,188 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=43.1 pTM=0.266 ipTM=0.153 tol=7.44
2024-12-08 23:52:30,942 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=42.7 pTM=0.265 ipTM=0.151 tol=8.38
2024-12-08 23:52:30,943 alphafold2_multimer_v3_model_4_seed_000 took 2070.3s (30 recycles)
2024-12-08 23:53:39,131 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=43.2 pTM=0.253 ipTM=0.144
2024-12-08 23:54:45,817 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=44.8 pTM=0.254 ipTM=0.146 tol=35.8
2024-12-08 23:55:52,423 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=45.8 pTM=0.269 ipTM=0.147 tol=12.2
2024-12-08 23:56:58,979 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=46.2 pTM=0.272 ipTM=0.15 tol=8.91
2024-12-08 23:58:05,533 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=46 pTM=0.272 ipTM=0.152 tol=12.9
2024-12-08 23:59:12,087 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=46.6 pTM=0.273 ipTM=0.155 tol=8.83
2024-12-09 00:00:18,588 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=46.8 pTM=0.275 ipTM=0.162 tol=8.63
2024-12-09 00:01:25,089 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=47.3 pTM=0.274 ipTM=0.165 tol=6.3
2024-12-09 00:02:31,571 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=47.3 pTM=0.274 ipTM=0.168 tol=4.21
2024-12-09 00:03:38,054 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=47.2 pTM=0.275 ipTM=0.165 tol=7.43
2024-12-09 00:04:44,510 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=47.7 pTM=0.276 ipTM=0.17 tol=7
2024-12-09 00:05:50,990 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=47.2 pTM=0.276 ipTM=0.17 tol=6
2024-12-09 00:06:57,428 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=47.2 pTM=0.274 ipTM=0.168 tol=3.92
2024-12-09 00:08:03,863 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=47.4 pTM=0.275 ipTM=0.168 tol=2.87
2024-12-09 00:09:10,311 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=47.4 pTM=0.276 ipTM=0.169 tol=3.46
2024-12-09 00:10:16,799 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=47.1 pTM=0.274 ipTM=0.166 tol=3.23
2024-12-09 00:11:23,305 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=46.9 pTM=0.273 ipTM=0.167 tol=3.07
2024-12-09 00:12:29,795 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=47.5 pTM=0.274 ipTM=0.167 tol=3.54
2024-12-09 00:13:36,286 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=47.5 pTM=0.275 ipTM=0.167 tol=3.32
2024-12-09 00:14:42,773 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=47.2 pTM=0.274 ipTM=0.167 tol=6.46
2024-12-09 00:15:49,296 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=47.2 pTM=0.274 ipTM=0.169 tol=7.14
2024-12-09 00:16:55,798 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=47.3 pTM=0.273 ipTM=0.168 tol=4.11
2024-12-09 00:18:02,314 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=47 pTM=0.273 ipTM=0.167 tol=9.65
2024-12-09 00:19:08,829 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=47 pTM=0.274 ipTM=0.166 tol=10.3
2024-12-09 00:20:15,345 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=46.9 pTM=0.274 ipTM=0.165 tol=4.46
2024-12-09 00:21:21,849 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=47.2 pTM=0.274 ipTM=0.167 tol=3.16
2024-12-09 00:22:28,360 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=47.2 pTM=0.274 ipTM=0.167 tol=3.03
2024-12-09 00:23:34,840 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=47.5 pTM=0.273 ipTM=0.167 tol=6.22
2024-12-09 00:24:41,313 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=47.5 pTM=0.274 ipTM=0.166 tol=6.09
2024-12-09 00:25:47,833 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=47.2 pTM=0.272 ipTM=0.164 tol=3.45
2024-12-09 00:26:54,308 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=47.1 pTM=0.274 ipTM=0.165 tol=3.41
2024-12-09 00:26:54,309 alphafold2_multimer_v3_model_5_seed_000 took 2062.0s (30 recycles)
2024-12-09 00:26:55,655 reranking models by 'multimer' metric
2024-12-09 00:26:59,433 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 00:29:45,749 Relaxation took 170.1s
2024-12-09 00:29:45,750 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=47.7 pTM=0.287 ipTM=0.196
2024-12-09 00:31:55,417 Relaxation took 129.7s
2024-12-09 00:31:55,434 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=47.5 pTM=0.289 ipTM=0.187
2024-12-09 00:34:04,628 Relaxation took 129.2s
2024-12-09 00:34:04,628 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=47.1 pTM=0.274 ipTM=0.165
2024-12-09 00:37:38,556 Relaxation took 213.9s
2024-12-09 00:37:38,556 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=48.3 pTM=0.274 ipTM=0.163
2024-12-09 00:39:53,358 Relaxation took 134.8s
2024-12-09 00:39:53,358 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=42.7 pTM=0.265 ipTM=0.151
2024-12-09 00:39:56,765 Done