2024-12-08 21:32:01,129 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 21:32:01,450 Running on GPU
2024-12-08 21:32:05,291 Found 6 citations for tools or databases
2024-12-08 21:32:05,292 Query 1/1: TRIM24_KRT39 (length 1541)
2024-12-08 21:32:05,570 Sleeping for 9s. Reason: PENDING
2024-12-08 21:32:14,829 Sleeping for 8s. Reason: RUNNING
2024-12-08 21:32:23,096 Sleeping for 9s. Reason: RUNNING
2024-12-08 21:32:32,353 Sleeping for 5s. Reason: RUNNING
2024-12-08 21:32:37,608 Sleeping for 6s. Reason: RUNNING
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2024-12-08 21:32:54,122 Sleeping for 10s. Reason: RUNNING
2024-12-08 21:33:04,384 Sleeping for 9s. Reason: RUNNING
2024-12-08 21:33:13,642 Sleeping for 8s. Reason: RUNNING
2024-12-08 21:33:21,907 Sleeping for 5s. Reason: RUNNING
2024-12-08 21:33:27,167 Sleeping for 7s. Reason: RUNNING
2024-12-08 21:33:34,421 Sleeping for 7s. Reason: RUNNING
2024-12-08 21:33:41,688 Sleeping for 5s. Reason: RUNNING
2024-12-08 21:33:46,946 Sleeping for 7s. Reason: RUNNING
2024-12-08 21:33:54,208 Sleeping for 6s. Reason: RUNNING
2024-12-08 21:34:00,471 Sleeping for 6s. Reason: RUNNING
2024-12-08 21:34:06,729 Sleeping for 7s. Reason: RUNNING
2024-12-08 21:34:13,991 Sleeping for 7s. Reason: RUNNING
2024-12-08 21:34:21,256 Sleeping for 7s. Reason: RUNNING
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2024-12-08 21:34:36,789 Sleeping for 5s. Reason: RUNNING
2024-12-08 21:34:42,046 Sleeping for 7s. Reason: RUNNING
2024-12-08 21:34:49,302 Sleeping for 9s. Reason: RUNNING
2024-12-08 21:34:58,562 Sleeping for 6s. Reason: RUNNING
2024-12-08 21:35:04,821 Sleeping for 5s. Reason: RUNNING
2024-12-08 21:35:10,078 Sleeping for 8s. Reason: RUNNING
2024-12-08 21:35:18,340 Sleeping for 7s. Reason: RUNNING
2024-12-08 21:35:25,602 Sleeping for 5s. Reason: RUNNING
2024-12-08 21:35:30,857 Sleeping for 7s. Reason: RUNNING
2024-12-08 21:35:38,114 Sleeping for 5s. Reason: RUNNING
2024-12-08 21:35:43,371 Sleeping for 5s. Reason: RUNNING
2024-12-08 21:35:48,632 Sleeping for 9s. Reason: RUNNING
2024-12-08 21:35:57,892 Sleeping for 7s. Reason: RUNNING
2024-12-08 21:36:05,147 Sleeping for 6s. Reason: RUNNING
2024-12-08 21:36:13,328 Sleeping for 8s. Reason: PENDING
2024-12-08 21:36:21,589 Sleeping for 5s. Reason: RUNNING
2024-12-08 21:36:26,844 Sleeping for 10s. Reason: RUNNING
2024-12-08 21:36:37,104 Sleeping for 5s. Reason: RUNNING
2024-12-08 21:36:42,364 Sleeping for 8s. Reason: RUNNING
2024-12-08 21:36:50,617 Sleeping for 7s. Reason: RUNNING
2024-12-08 21:36:57,870 Sleeping for 10s. Reason: RUNNING
2024-12-08 21:37:08,129 Sleeping for 7s. Reason: RUNNING
2024-12-08 21:37:15,384 Sleeping for 10s. Reason: RUNNING
2024-12-08 21:37:25,642 Sleeping for 8s. Reason: RUNNING
2024-12-08 21:37:33,909 Sleeping for 7s. Reason: RUNNING
2024-12-08 21:37:41,316 Sleeping for 10s. Reason: RUNNING
2024-12-08 21:37:51,579 Sleeping for 5s. Reason: RUNNING
2024-12-08 21:37:56,835 Sleeping for 9s. Reason: RUNNING
2024-12-08 21:38:06,097 Sleeping for 9s. Reason: RUNNING
2024-12-08 21:38:15,362 Sleeping for 5s. Reason: RUNNING
2024-12-08 21:38:20,615 Sleeping for 7s. Reason: RUNNING
2024-12-08 21:38:27,869 Sleeping for 7s. Reason: RUNNING
2024-12-08 21:38:41,491 Setting max_seq=508, max_extra_seq=2048
2024-12-08 21:42:52,339 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=46.3 pTM=0.29 ipTM=0.169
2024-12-08 21:44:04,113 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=46.9 pTM=0.309 ipTM=0.177 tol=21.3
2024-12-08 21:45:16,063 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=45.3 pTM=0.297 ipTM=0.181 tol=13.1
2024-12-08 21:46:28,219 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=46.4 pTM=0.298 ipTM=0.181 tol=13.4
2024-12-08 21:47:40,571 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=46.9 pTM=0.256 ipTM=0.169 tol=22.2
2024-12-08 21:48:52,845 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=48.3 pTM=0.269 ipTM=0.163 tol=10.5
2024-12-08 21:50:05,109 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=48.4 pTM=0.27 ipTM=0.159 tol=11.5
2024-12-08 21:51:17,329 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=48.8 pTM=0.267 ipTM=0.157 tol=11.1
2024-12-08 21:52:29,546 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=48.7 pTM=0.267 ipTM=0.158 tol=11.8
2024-12-08 21:53:41,778 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=48.2 pTM=0.272 ipTM=0.165 tol=12.9
2024-12-08 21:54:53,962 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=47.9 pTM=0.27 ipTM=0.168 tol=14.4
2024-12-08 21:56:06,214 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=47.5 pTM=0.271 ipTM=0.169 tol=13
2024-12-08 21:57:18,441 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=47.6 pTM=0.272 ipTM=0.169 tol=7.81
2024-12-08 21:58:30,628 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=48.2 pTM=0.272 ipTM=0.169 tol=9.62
2024-12-08 21:59:42,773 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=48.2 pTM=0.27 ipTM=0.167 tol=8.06
2024-12-08 22:00:54,956 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=48.1 pTM=0.271 ipTM=0.171 tol=9.19
2024-12-08 22:02:07,141 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=47.9 pTM=0.27 ipTM=0.169 tol=7.82
2024-12-08 22:03:19,196 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=47.7 pTM=0.271 ipTM=0.171 tol=7.61
2024-12-08 22:04:31,289 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=48 pTM=0.272 ipTM=0.172 tol=5.58
2024-12-08 22:05:43,407 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=47.9 pTM=0.273 ipTM=0.173 tol=7.11
2024-12-08 22:06:55,514 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=48 pTM=0.273 ipTM=0.176 tol=11.7
2024-12-08 22:08:07,628 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=48.4 pTM=0.275 ipTM=0.178 tol=8.95
2024-12-08 22:09:19,691 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=48.2 pTM=0.275 ipTM=0.18 tol=9.05
2024-12-08 22:10:31,744 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=48.3 pTM=0.275 ipTM=0.18 tol=15.2
2024-12-08 22:11:43,742 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=48.3 pTM=0.278 ipTM=0.184 tol=10.4
2024-12-08 22:12:55,824 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=48.6 pTM=0.278 ipTM=0.184 tol=13
2024-12-08 22:14:07,873 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=48.4 pTM=0.279 ipTM=0.185 tol=11.1
2024-12-08 22:15:19,930 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=48.5 pTM=0.281 ipTM=0.187 tol=13.5
2024-12-08 22:16:31,989 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=48.6 pTM=0.281 ipTM=0.188 tol=8.75
2024-12-08 22:17:44,081 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=48.4 pTM=0.281 ipTM=0.185 tol=8.7
2024-12-08 22:18:56,115 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=48.3 pTM=0.278 ipTM=0.178 tol=8.53
2024-12-08 22:18:56,116 alphafold2_multimer_v3_model_1_seed_000 took 2409.5s (30 recycles)
2024-12-08 22:20:09,709 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=45.5 pTM=0.25 ipTM=0.156
2024-12-08 22:21:21,860 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=48.2 pTM=0.256 ipTM=0.156 tol=36.7
2024-12-08 22:22:33,891 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=49.1 pTM=0.269 ipTM=0.164 tol=18.8
2024-12-08 22:23:45,960 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=48.2 pTM=0.269 ipTM=0.163 tol=13.5
2024-12-08 22:24:57,981 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=48.8 pTM=0.268 ipTM=0.166 tol=11.6
2024-12-08 22:26:09,945 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=48.7 pTM=0.267 ipTM=0.165 tol=8.31
2024-12-08 22:27:21,904 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=49 pTM=0.266 ipTM=0.164 tol=10.2
2024-12-08 22:28:33,864 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=49 pTM=0.267 ipTM=0.165 tol=6.92
2024-12-08 22:29:45,873 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=49.3 pTM=0.267 ipTM=0.164 tol=6.36
2024-12-08 22:30:57,884 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=48.9 pTM=0.268 ipTM=0.165 tol=5.75
2024-12-08 22:32:09,859 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=49.5 pTM=0.266 ipTM=0.165 tol=5.45
2024-12-08 22:33:21,812 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=49.1 pTM=0.266 ipTM=0.165 tol=5.49
2024-12-08 22:34:33,735 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=49.2 pTM=0.266 ipTM=0.165 tol=5.85
2024-12-08 22:35:45,635 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=49.2 pTM=0.267 ipTM=0.167 tol=4.95
2024-12-08 22:36:57,579 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=49.3 pTM=0.266 ipTM=0.165 tol=6.05
2024-12-08 22:38:09,528 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=49.3 pTM=0.266 ipTM=0.166 tol=5.83
2024-12-08 22:39:21,443 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=49.5 pTM=0.266 ipTM=0.166 tol=3.6
2024-12-08 22:40:33,313 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=49.6 pTM=0.267 ipTM=0.167 tol=2.83
2024-12-08 22:41:45,156 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=49.7 pTM=0.267 ipTM=0.166 tol=3.22
2024-12-08 22:42:56,988 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=49.5 pTM=0.266 ipTM=0.166 tol=3.33
2024-12-08 22:44:08,943 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=49.6 pTM=0.263 ipTM=0.165 tol=4.4
2024-12-08 22:45:20,924 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=49.5 pTM=0.265 ipTM=0.165 tol=4.67
2024-12-08 22:46:32,960 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=49.5 pTM=0.266 ipTM=0.166 tol=3.49
2024-12-08 22:47:45,007 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=49.4 pTM=0.265 ipTM=0.166 tol=6.23
2024-12-08 22:48:57,081 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=49.4 pTM=0.266 ipTM=0.166 tol=3.35
2024-12-08 22:50:09,109 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=49.5 pTM=0.265 ipTM=0.166 tol=6.59
2024-12-08 22:51:21,147 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=49.5 pTM=0.266 ipTM=0.166 tol=6.14
2024-12-08 22:52:33,197 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=49.5 pTM=0.266 ipTM=0.167 tol=5.12
2024-12-08 22:53:45,235 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=49.4 pTM=0.266 ipTM=0.167 tol=3.71
2024-12-08 22:54:57,287 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=49.2 pTM=0.266 ipTM=0.165 tol=4.23
2024-12-08 22:56:09,323 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=49.2 pTM=0.267 ipTM=0.167 tol=3.8
2024-12-08 22:56:09,324 alphafold2_multimer_v3_model_2_seed_000 took 2231.8s (30 recycles)
2024-12-08 22:57:23,068 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=43.3 pTM=0.252 ipTM=0.155
2024-12-08 22:58:35,373 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=45.9 pTM=0.26 ipTM=0.161 tol=36.8
2024-12-08 22:59:47,648 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=46.6 pTM=0.278 ipTM=0.155 tol=13.4
2024-12-08 23:00:59,907 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=46.5 pTM=0.278 ipTM=0.157 tol=11.2
2024-12-08 23:02:12,163 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=46.6 pTM=0.279 ipTM=0.156 tol=6.26
2024-12-08 23:03:24,500 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=46.3 pTM=0.278 ipTM=0.148 tol=14.9
2024-12-08 23:04:36,688 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=47.2 pTM=0.284 ipTM=0.156 tol=17.4
2024-12-08 23:05:48,794 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=47.3 pTM=0.286 ipTM=0.169 tol=13.6
2024-12-08 23:07:00,851 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=47.7 pTM=0.287 ipTM=0.172 tol=6.49
2024-12-08 23:08:12,851 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=47.5 pTM=0.288 ipTM=0.174 tol=8.95
2024-12-08 23:09:24,886 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=47.6 pTM=0.288 ipTM=0.177 tol=4.84
2024-12-08 23:10:36,970 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=47.7 pTM=0.291 ipTM=0.179 tol=4.48
2024-12-08 23:11:49,087 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=47.5 pTM=0.29 ipTM=0.185 tol=4.48
2024-12-08 23:13:01,213 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=47.8 pTM=0.29 ipTM=0.184 tol=9.75
2024-12-08 23:14:13,347 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=47.8 pTM=0.291 ipTM=0.187 tol=10.3
2024-12-08 23:15:25,431 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=47.9 pTM=0.29 ipTM=0.188 tol=2.7
2024-12-08 23:16:37,566 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=47.8 pTM=0.291 ipTM=0.189 tol=2.29
2024-12-08 23:17:49,646 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=47.8 pTM=0.292 ipTM=0.193 tol=2.14
2024-12-08 23:19:01,646 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=48 pTM=0.292 ipTM=0.193 tol=2.32
2024-12-08 23:20:13,617 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=47.5 pTM=0.292 ipTM=0.193 tol=2.67
2024-12-08 23:21:25,619 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=47.8 pTM=0.291 ipTM=0.196 tol=3.14
2024-12-08 23:22:37,684 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=47.8 pTM=0.292 ipTM=0.193 tol=2.97
2024-12-08 23:23:49,773 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=47.7 pTM=0.291 ipTM=0.195 tol=2.83
2024-12-08 23:25:01,840 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=47.8 pTM=0.292 ipTM=0.192 tol=4.15
2024-12-08 23:26:13,926 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=47.9 pTM=0.293 ipTM=0.195 tol=2.86
2024-12-08 23:27:26,010 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=47.8 pTM=0.291 ipTM=0.192 tol=2.56
2024-12-08 23:28:38,115 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=47.8 pTM=0.291 ipTM=0.195 tol=2.32
2024-12-08 23:29:50,171 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=47.5 pTM=0.291 ipTM=0.192 tol=2.96
2024-12-08 23:31:02,245 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=47.8 pTM=0.291 ipTM=0.195 tol=4.27
2024-12-08 23:32:14,302 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=47.6 pTM=0.292 ipTM=0.194 tol=2.34
2024-12-08 23:33:26,410 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=47.6 pTM=0.292 ipTM=0.193 tol=2.61
2024-12-08 23:33:26,412 alphafold2_multimer_v3_model_3_seed_000 took 2235.7s (30 recycles)
2024-12-08 23:34:40,088 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=43.9 pTM=0.316 ipTM=0.256
2024-12-08 23:35:52,333 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=43.5 pTM=0.303 ipTM=0.24 tol=17.8
2024-12-08 23:37:04,656 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=43.4 pTM=0.296 ipTM=0.202 tol=8.02
2024-12-08 23:38:17,017 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=42.4 pTM=0.294 ipTM=0.185 tol=8.75
2024-12-08 23:39:29,441 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=41.6 pTM=0.293 ipTM=0.174 tol=9.73
2024-12-08 23:40:42,193 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=41.3 pTM=0.248 ipTM=0.143 tol=24.8
2024-12-08 23:41:54,846 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=43 pTM=0.26 ipTM=0.145 tol=13.6
2024-12-08 23:43:07,402 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=43.2 pTM=0.265 ipTM=0.174 tol=25
2024-12-08 23:44:19,732 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=44.1 pTM=0.267 ipTM=0.176 tol=13.2
2024-12-08 23:45:32,137 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=44.1 pTM=0.263 ipTM=0.174 tol=11.6
2024-12-08 23:46:44,459 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=44.2 pTM=0.265 ipTM=0.183 tol=7.52
2024-12-08 23:47:56,874 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=43.7 pTM=0.26 ipTM=0.166 tol=6.38
2024-12-08 23:49:09,316 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=43.5 pTM=0.26 ipTM=0.165 tol=5.36
2024-12-08 23:50:21,621 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=43.7 pTM=0.262 ipTM=0.169 tol=3.99
2024-12-08 23:51:33,979 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=43.6 pTM=0.26 ipTM=0.165 tol=2.68
2024-12-08 23:52:46,385 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=43.5 pTM=0.258 ipTM=0.164 tol=3.18
2024-12-08 23:53:58,833 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=42.9 pTM=0.257 ipTM=0.165 tol=3.72
2024-12-08 23:55:11,214 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=43.4 pTM=0.26 ipTM=0.161 tol=2.97
2024-12-08 23:56:23,587 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=43.6 pTM=0.261 ipTM=0.163 tol=4.64
2024-12-08 23:57:36,004 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=43.2 pTM=0.261 ipTM=0.16 tol=5.15
2024-12-08 23:58:48,437 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=43.3 pTM=0.258 ipTM=0.162 tol=3.63
2024-12-09 00:00:00,928 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=43.1 pTM=0.259 ipTM=0.157 tol=4.55
2024-12-09 00:01:13,447 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=43.2 pTM=0.258 ipTM=0.157 tol=3.97
2024-12-09 00:02:25,900 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=43.5 pTM=0.259 ipTM=0.169 tol=4.66
2024-12-09 00:03:38,406 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=43.4 pTM=0.257 ipTM=0.165 tol=4.51
2024-12-09 00:04:50,920 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=43.1 pTM=0.257 ipTM=0.159 tol=3.85
2024-12-09 00:06:03,441 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=43.1 pTM=0.256 ipTM=0.168 tol=3.98
2024-12-09 00:07:15,932 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=43.1 pTM=0.258 ipTM=0.16 tol=4.72
2024-12-09 00:08:28,370 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=43.2 pTM=0.257 ipTM=0.164 tol=4.18
2024-12-09 00:09:40,830 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=43 pTM=0.256 ipTM=0.165 tol=5.27
2024-12-09 00:10:53,256 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=43.2 pTM=0.26 ipTM=0.169 tol=4.93
2024-12-09 00:10:53,257 alphafold2_multimer_v3_model_4_seed_000 took 2245.4s (30 recycles)
2024-12-09 00:12:07,181 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=41.7 pTM=0.252 ipTM=0.145
2024-12-09 00:13:19,494 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=44.7 pTM=0.264 ipTM=0.149 tol=24.3
2024-12-09 00:14:31,728 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=45.8 pTM=0.273 ipTM=0.158 tol=20.3
2024-12-09 00:15:43,894 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=46 pTM=0.273 ipTM=0.165 tol=13.5
2024-12-09 00:16:56,065 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=46.2 pTM=0.273 ipTM=0.169 tol=10.9
2024-12-09 00:18:08,225 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=46.7 pTM=0.273 ipTM=0.172 tol=9.68
2024-12-09 00:19:20,368 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=46.9 pTM=0.274 ipTM=0.173 tol=6.25
2024-12-09 00:20:32,522 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=47.2 pTM=0.273 ipTM=0.174 tol=5.1
2024-12-09 00:21:44,652 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=47.4 pTM=0.273 ipTM=0.173 tol=4.55
2024-12-09 00:22:56,773 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=47.1 pTM=0.272 ipTM=0.174 tol=3.53
2024-12-09 00:24:08,848 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=47.4 pTM=0.273 ipTM=0.176 tol=2.78
2024-12-09 00:25:20,938 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=47.2 pTM=0.273 ipTM=0.176 tol=2.46
2024-12-09 00:26:33,077 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=47 pTM=0.272 ipTM=0.176 tol=2.8
2024-12-09 00:27:45,248 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=47.2 pTM=0.273 ipTM=0.175 tol=6.68
2024-12-09 00:28:57,409 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=47 pTM=0.271 ipTM=0.173 tol=7.63
2024-12-09 00:30:09,482 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=47 pTM=0.271 ipTM=0.173 tol=3.36
2024-12-09 00:31:21,543 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=47 pTM=0.271 ipTM=0.173 tol=7.79
2024-12-09 00:32:33,660 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=47.1 pTM=0.271 ipTM=0.174 tol=4.12
2024-12-09 00:33:45,752 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=47.4 pTM=0.272 ipTM=0.174 tol=6.5
2024-12-09 00:34:57,840 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=46.5 pTM=0.272 ipTM=0.172 tol=3.65
2024-12-09 00:36:10,000 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=46.9 pTM=0.27 ipTM=0.173 tol=7.21
2024-12-09 00:37:22,176 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=47.1 pTM=0.27 ipTM=0.173 tol=7.08
2024-12-09 00:38:34,388 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=47.1 pTM=0.27 ipTM=0.174 tol=3.98
2024-12-09 00:39:46,530 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=47.1 pTM=0.271 ipTM=0.172 tol=3.18
2024-12-09 00:40:58,619 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=47.2 pTM=0.272 ipTM=0.172 tol=3.06
2024-12-09 00:42:10,670 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=47.1 pTM=0.27 ipTM=0.173 tol=3.22
2024-12-09 00:43:22,748 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=47 pTM=0.27 ipTM=0.172 tol=7.49
2024-12-09 00:44:34,815 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=46.7 pTM=0.269 ipTM=0.173 tol=4.54
2024-12-09 00:45:46,941 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=47.1 pTM=0.269 ipTM=0.172 tol=6.72
2024-12-09 00:46:59,141 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=46.7 pTM=0.271 ipTM=0.172 tol=4.2
2024-12-09 00:48:11,272 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=47 pTM=0.271 ipTM=0.171 tol=4.33
2024-12-09 00:48:11,273 alphafold2_multimer_v3_model_5_seed_000 took 2236.6s (30 recycles)
2024-12-09 00:48:12,684 reranking models by 'multimer' metric
2024-12-09 00:48:16,995 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 00:51:11,629 Relaxation took 178.9s
2024-12-09 00:51:11,630 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=47.6 pTM=0.292 ipTM=0.193
2024-12-09 00:53:40,395 Relaxation took 148.8s
2024-12-09 00:53:40,396 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=48.3 pTM=0.278 ipTM=0.178
2024-12-09 00:57:49,926 Relaxation took 249.5s
2024-12-09 00:57:49,926 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=47 pTM=0.271 ipTM=0.171
2024-12-09 01:00:57,806 Relaxation took 187.9s
2024-12-09 01:00:57,806 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=43.2 pTM=0.26 ipTM=0.169
2024-12-09 01:03:10,019 Relaxation took 132.2s
2024-12-09 01:03:10,019 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=49.2 pTM=0.267 ipTM=0.167
2024-12-09 01:03:13,294 Done