2024-12-08 21:36:43,339 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 21:36:43,703 Running on GPU
2024-12-08 21:36:48,098 Found 6 citations for tools or databases
2024-12-08 21:36:48,098 Query 1/1: TRIM24_MAD2L1 (length 1255)
2024-12-08 21:36:48,380 Sleeping for 10s. Reason: PENDING
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2024-12-08 21:40:34,933 Sleeping for 10s. Reason: RUNNING
2024-12-08 21:40:48,103 Sleeping for 7s. Reason: PENDING
2024-12-08 21:40:55,363 Sleeping for 9s. Reason: RUNNING
2024-12-08 21:41:04,626 Sleeping for 10s. Reason: RUNNING
2024-12-08 21:41:14,885 Sleeping for 7s. Reason: RUNNING
2024-12-08 21:41:22,138 Sleeping for 7s. Reason: RUNNING
2024-12-08 21:41:29,394 Sleeping for 7s. Reason: RUNNING
2024-12-08 21:41:36,649 Sleeping for 5s. Reason: RUNNING
2024-12-08 21:41:41,906 Sleeping for 9s. Reason: RUNNING
2024-12-08 21:41:51,167 Sleeping for 8s. Reason: RUNNING
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2024-12-08 21:42:31,469 Sleeping for 7s. Reason: RUNNING
2024-12-08 21:42:38,723 Sleeping for 9s. Reason: RUNNING
2024-12-08 21:42:47,986 Sleeping for 9s. Reason: RUNNING
2024-12-08 21:42:57,246 Sleeping for 8s. Reason: RUNNING
2024-12-08 21:43:11,706 Setting max_seq=508, max_extra_seq=2048
2024-12-08 21:47:15,031 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=52.2 pTM=0.31 ipTM=0.355
2024-12-08 21:47:57,128 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=51.8 pTM=0.311 ipTM=0.601 tol=14.8
2024-12-08 21:48:39,365 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=51.6 pTM=0.304 ipTM=0.51 tol=13.5
2024-12-08 21:49:21,757 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=51.7 pTM=0.302 ipTM=0.416 tol=8.2
2024-12-08 21:50:04,205 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=50.8 pTM=0.279 ipTM=0.385 tol=16
2024-12-08 21:50:46,651 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=53.2 pTM=0.287 ipTM=0.49 tol=14.5
2024-12-08 21:51:29,117 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=53.9 pTM=0.282 ipTM=0.437 tol=6.82
2024-12-08 21:52:11,693 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=54.2 pTM=0.284 ipTM=0.582 tol=8.19
2024-12-08 21:52:54,316 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=54.1 pTM=0.284 ipTM=0.312 tol=4.77
2024-12-08 21:53:36,886 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=53.9 pTM=0.283 ipTM=0.374 tol=6.02
2024-12-08 21:54:19,450 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=54.1 pTM=0.284 ipTM=0.364 tol=6.16
2024-12-08 21:55:01,980 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=54.2 pTM=0.284 ipTM=0.354 tol=5.27
2024-12-08 21:55:44,557 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=54.2 pTM=0.285 ipTM=0.327 tol=5.48
2024-12-08 21:56:27,087 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=54.1 pTM=0.284 ipTM=0.457 tol=5.92
2024-12-08 21:57:09,614 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=54 pTM=0.285 ipTM=0.514 tol=4.52
2024-12-08 21:57:52,212 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=54.2 pTM=0.282 ipTM=0.293 tol=6.48
2024-12-08 21:58:34,790 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=54.1 pTM=0.283 ipTM=0.481 tol=4.09
2024-12-08 21:59:17,348 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=54 pTM=0.284 ipTM=0.475 tol=5.25
2024-12-08 21:59:59,908 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=54 pTM=0.283 ipTM=0.315 tol=5
2024-12-08 22:00:42,435 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=53.7 pTM=0.284 ipTM=0.368 tol=5.07
2024-12-08 22:01:24,988 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=53.7 pTM=0.287 ipTM=0.505 tol=5.11
2024-12-08 22:02:07,534 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=53.6 pTM=0.281 ipTM=0.35 tol=3.33
2024-12-08 22:02:50,050 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=53.8 pTM=0.283 ipTM=0.36 tol=4.27
2024-12-08 22:03:32,573 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=54 pTM=0.28 ipTM=0.397 tol=5.43
2024-12-08 22:04:15,076 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=53.8 pTM=0.284 ipTM=0.408 tol=6.27
2024-12-08 22:04:57,614 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=53.6 pTM=0.282 ipTM=0.34 tol=4.59
2024-12-08 22:05:40,110 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=53.9 pTM=0.284 ipTM=0.473 tol=4.7
2024-12-08 22:06:22,631 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=53.8 pTM=0.281 ipTM=0.414 tol=4.88
2024-12-08 22:07:05,155 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=54.2 pTM=0.283 ipTM=0.426 tol=3.9
2024-12-08 22:07:47,653 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=53.8 pTM=0.282 ipTM=0.346 tol=5.33
2024-12-08 22:08:30,168 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=54.1 pTM=0.285 ipTM=0.484 tol=3.35
2024-12-08 22:08:30,169 alphafold2_multimer_v3_model_1_seed_000 took 1511.7s (30 recycles)
2024-12-08 22:09:14,034 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=50.8 pTM=0.295 ipTM=0.721
2024-12-08 22:09:56,692 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=53.2 pTM=0.291 ipTM=0.663 tol=31.2
2024-12-08 22:10:39,332 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=53.7 pTM=0.282 ipTM=0.42 tol=14.3
2024-12-08 22:11:21,973 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=54.4 pTM=0.285 ipTM=0.361 tol=14.9
2024-12-08 22:12:04,627 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=54.5 pTM=0.286 ipTM=0.448 tol=11.1
2024-12-08 22:12:47,255 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=54.3 pTM=0.283 ipTM=0.543 tol=7.27
2024-12-08 22:13:29,858 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=54.1 pTM=0.28 ipTM=0.403 tol=5.42
2024-12-08 22:14:12,486 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=54.5 pTM=0.281 ipTM=0.451 tol=5.07
2024-12-08 22:14:55,091 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=54.5 pTM=0.283 ipTM=0.438 tol=5.59
2024-12-08 22:15:37,754 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=54.2 pTM=0.278 ipTM=0.429 tol=5.05
2024-12-08 22:16:20,392 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=54.3 pTM=0.283 ipTM=0.476 tol=5.28
2024-12-08 22:17:03,033 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=54.3 pTM=0.28 ipTM=0.405 tol=4.43
2024-12-08 22:17:45,697 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=54.2 pTM=0.279 ipTM=0.408 tol=7.05
2024-12-08 22:18:28,356 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=54.5 pTM=0.282 ipTM=0.375 tol=8.85
2024-12-08 22:19:11,051 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=54.2 pTM=0.28 ipTM=0.391 tol=4.88
2024-12-08 22:19:53,722 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=54.2 pTM=0.28 ipTM=0.374 tol=3.56
2024-12-08 22:20:36,347 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=54.4 pTM=0.282 ipTM=0.46 tol=3.5
2024-12-08 22:21:19,005 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=54.3 pTM=0.281 ipTM=0.429 tol=2.93
2024-12-08 22:22:01,613 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=54.3 pTM=0.282 ipTM=0.521 tol=2.87
2024-12-08 22:22:44,242 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=54 pTM=0.28 ipTM=0.391 tol=4.62
2024-12-08 22:23:26,928 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=54.1 pTM=0.279 ipTM=0.468 tol=3.34
2024-12-08 22:24:09,567 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=54.2 pTM=0.279 ipTM=0.43 tol=3.41
2024-12-08 22:24:52,244 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=54.2 pTM=0.28 ipTM=0.49 tol=4.18
2024-12-08 22:25:34,917 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=54.2 pTM=0.28 ipTM=0.337 tol=2.91
2024-12-08 22:26:17,547 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=54.2 pTM=0.281 ipTM=0.449 tol=3.78
2024-12-08 22:27:00,166 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=54.2 pTM=0.28 ipTM=0.319 tol=4.76
2024-12-08 22:27:42,904 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=54.4 pTM=0.281 ipTM=0.518 tol=6.24
2024-12-08 22:28:25,544 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=54.2 pTM=0.281 ipTM=0.385 tol=3.95
2024-12-08 22:29:08,167 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=54.3 pTM=0.28 ipTM=0.508 tol=2.86
2024-12-08 22:29:50,815 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=54.3 pTM=0.279 ipTM=0.379 tol=2.91
2024-12-08 22:30:33,454 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=54.4 pTM=0.281 ipTM=0.495 tol=2.88
2024-12-08 22:30:33,455 alphafold2_multimer_v3_model_2_seed_000 took 1322.1s (30 recycles)
2024-12-08 22:31:17,387 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=51.2 pTM=0.28 ipTM=0.527
2024-12-08 22:32:00,072 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=51.9 pTM=0.282 ipTM=0.575 tol=28.1
2024-12-08 22:32:42,755 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=50.6 pTM=0.28 ipTM=0.545 tol=19.1
2024-12-08 22:33:25,420 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=53.3 pTM=0.283 ipTM=0.531 tol=25.9
2024-12-08 22:34:08,055 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=54.2 pTM=0.29 ipTM=0.593 tol=13.1
2024-12-08 22:34:50,727 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=54.4 pTM=0.294 ipTM=0.587 tol=8.57
2024-12-08 22:35:33,399 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=54.3 pTM=0.29 ipTM=0.517 tol=6.45
2024-12-08 22:36:16,073 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=54.5 pTM=0.292 ipTM=0.602 tol=4.74
2024-12-08 22:36:58,757 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=54.4 pTM=0.292 ipTM=0.573 tol=3.91
2024-12-08 22:37:41,481 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=54.2 pTM=0.291 ipTM=0.65 tol=11.9
2024-12-08 22:38:24,513 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=53.9 pTM=0.29 ipTM=0.265 tol=6.32
2024-12-08 22:39:07,494 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=54.2 pTM=0.294 ipTM=0.565 tol=4.74
2024-12-08 22:39:50,424 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=54.2 pTM=0.292 ipTM=0.569 tol=9.09
2024-12-08 22:40:33,211 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=54 pTM=0.292 ipTM=0.601 tol=4.09
2024-12-08 22:41:15,978 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=53.8 pTM=0.289 ipTM=0.273 tol=3.13
2024-12-08 22:41:58,678 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=54 pTM=0.292 ipTM=0.587 tol=10.6
2024-12-08 22:42:41,410 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=53.9 pTM=0.294 ipTM=0.469 tol=5.34
2024-12-08 22:43:24,094 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=54 pTM=0.293 ipTM=0.592 tol=4.3
2024-12-08 22:44:06,796 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=53.7 pTM=0.292 ipTM=0.327 tol=10.2
2024-12-08 22:44:49,490 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=53.7 pTM=0.293 ipTM=0.38 tol=5.03
2024-12-08 22:45:32,216 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=53.5 pTM=0.29 ipTM=0.319 tol=3
2024-12-08 22:46:14,983 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=54 pTM=0.294 ipTM=0.58 tol=4.06
2024-12-08 22:46:57,727 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=53.8 pTM=0.292 ipTM=0.372 tol=3.62
2024-12-08 22:47:40,481 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=52.8 pTM=0.294 ipTM=0.508 tol=19.6
2024-12-08 22:48:23,257 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=53.5 pTM=0.285 ipTM=0.334 tol=15.6
2024-12-08 22:49:05,994 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=53.5 pTM=0.29 ipTM=0.431 tol=9.99
2024-12-08 22:49:48,753 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=53.7 pTM=0.288 ipTM=0.416 tol=12
2024-12-08 22:50:31,505 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=53.8 pTM=0.292 ipTM=0.502 tol=8.23
2024-12-08 22:51:14,226 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=53.8 pTM=0.289 ipTM=0.533 tol=13.5
2024-12-08 22:51:56,948 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=54.1 pTM=0.292 ipTM=0.541 tol=9.22
2024-12-08 22:52:39,672 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=53.9 pTM=0.291 ipTM=0.521 tol=14
2024-12-08 22:52:39,673 alphafold2_multimer_v3_model_3_seed_000 took 1325.0s (30 recycles)
2024-12-08 22:53:23,582 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=50.3 pTM=0.303 ipTM=0.522
2024-12-08 22:54:06,460 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=49.1 pTM=0.27 ipTM=0.293 tol=26.8
2024-12-08 22:54:49,310 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=51.3 pTM=0.27 ipTM=0.503 tol=28.5
2024-12-08 22:55:32,114 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=52.2 pTM=0.269 ipTM=0.255 tol=14.8
2024-12-08 22:56:14,918 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=52.7 pTM=0.273 ipTM=0.318 tol=9.38
2024-12-08 22:56:57,773 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=52.3 pTM=0.27 ipTM=0.449 tol=5.24
2024-12-08 22:57:40,560 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=52.6 pTM=0.274 ipTM=0.414 tol=9.19
2024-12-08 22:58:23,367 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=52.7 pTM=0.271 ipTM=0.349 tol=6.13
2024-12-08 22:59:06,161 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=53 pTM=0.274 ipTM=0.513 tol=4.64
2024-12-08 22:59:48,925 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=52.6 pTM=0.273 ipTM=0.294 tol=4.52
2024-12-08 23:00:31,700 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=52.8 pTM=0.276 ipTM=0.35 tol=2.77
2024-12-08 23:01:14,488 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=52.7 pTM=0.274 ipTM=0.297 tol=2.75
2024-12-08 23:01:57,266 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=52.8 pTM=0.274 ipTM=0.333 tol=2.79
2024-12-08 23:02:40,061 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=52.8 pTM=0.271 ipTM=0.304 tol=4.5
2024-12-08 23:03:22,834 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=52.8 pTM=0.272 ipTM=0.385 tol=5.09
2024-12-08 23:04:05,613 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=52.9 pTM=0.274 ipTM=0.309 tol=4.23
2024-12-08 23:04:48,375 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=52.9 pTM=0.278 ipTM=0.332 tol=7.25
2024-12-08 23:05:31,163 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=52.9 pTM=0.275 ipTM=0.301 tol=7.08
2024-12-08 23:06:13,939 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=52.9 pTM=0.28 ipTM=0.414 tol=4.78
2024-12-08 23:06:56,725 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=52.8 pTM=0.274 ipTM=0.307 tol=3.62
2024-12-08 23:07:39,500 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=52.7 pTM=0.271 ipTM=0.321 tol=3.68
2024-12-08 23:08:22,306 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=52.8 pTM=0.266 ipTM=0.304 tol=4.85
2024-12-08 23:09:05,058 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=52.7 pTM=0.269 ipTM=0.342 tol=3.5
2024-12-08 23:09:47,812 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=52.8 pTM=0.273 ipTM=0.35 tol=6.54
2024-12-08 23:10:30,569 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=52.9 pTM=0.271 ipTM=0.407 tol=5.41
2024-12-08 23:11:13,339 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=52.8 pTM=0.267 ipTM=0.407 tol=9.37
2024-12-08 23:11:56,030 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=52.9 pTM=0.274 ipTM=0.401 tol=10.1
2024-12-08 23:12:38,677 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=52.9 pTM=0.274 ipTM=0.499 tol=4.6
2024-12-08 23:13:21,339 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=52.9 pTM=0.271 ipTM=0.404 tol=3.29
2024-12-08 23:14:03,997 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=53 pTM=0.274 ipTM=0.351 tol=3.33
2024-12-08 23:14:46,656 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=53 pTM=0.274 ipTM=0.448 tol=3.15
2024-12-08 23:14:46,658 alphafold2_multimer_v3_model_4_seed_000 took 1325.8s (30 recycles)
2024-12-08 23:15:30,464 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=50.2 pTM=0.29 ipTM=0.635
2024-12-08 23:16:13,151 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=51.9 pTM=0.272 ipTM=0.359 tol=27
2024-12-08 23:16:55,837 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=53.4 pTM=0.277 ipTM=0.34 tol=14
2024-12-08 23:17:38,500 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=53.4 pTM=0.277 ipTM=0.314 tol=9.16
2024-12-08 23:18:21,184 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=53.7 pTM=0.277 ipTM=0.397 tol=6.12
2024-12-08 23:19:03,868 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=53.6 pTM=0.285 ipTM=0.618 tol=9.18
2024-12-08 23:19:46,511 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=53.4 pTM=0.282 ipTM=0.419 tol=8.98
2024-12-08 23:20:29,254 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=53.6 pTM=0.282 ipTM=0.539 tol=7.31
2024-12-08 23:21:11,972 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=53.7 pTM=0.279 ipTM=0.3 tol=6.05
2024-12-08 23:21:54,623 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=53.8 pTM=0.285 ipTM=0.521 tol=6.64
2024-12-08 23:22:37,280 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=54 pTM=0.281 ipTM=0.408 tol=5.01
2024-12-08 23:23:19,979 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=53.8 pTM=0.283 ipTM=0.519 tol=10
2024-12-08 23:24:02,626 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=54 pTM=0.282 ipTM=0.3 tol=5.9
2024-12-08 23:24:45,292 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=53.8 pTM=0.279 ipTM=0.315 tol=7
2024-12-08 23:25:27,972 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=53.9 pTM=0.28 ipTM=0.398 tol=5.83
2024-12-08 23:26:10,665 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=53.7 pTM=0.277 ipTM=0.319 tol=4.83
2024-12-08 23:26:53,329 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=53.6 pTM=0.28 ipTM=0.353 tol=7.01
2024-12-08 23:27:36,007 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=53.4 pTM=0.279 ipTM=0.258 tol=7.01
2024-12-08 23:28:18,683 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=53.5 pTM=0.279 ipTM=0.311 tol=7.48
2024-12-08 23:29:01,343 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=53.4 pTM=0.279 ipTM=0.267 tol=6.14
2024-12-08 23:29:44,011 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=53.6 pTM=0.279 ipTM=0.312 tol=9.12
2024-12-08 23:30:26,664 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=53.8 pTM=0.28 ipTM=0.294 tol=8.42
2024-12-08 23:31:09,319 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=53.8 pTM=0.279 ipTM=0.371 tol=8.07
2024-12-08 23:31:51,940 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=54.1 pTM=0.283 ipTM=0.526 tol=8.51
2024-12-08 23:32:34,584 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=54.2 pTM=0.283 ipTM=0.352 tol=5.41
2024-12-08 23:33:17,215 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=54 pTM=0.282 ipTM=0.349 tol=3.92
2024-12-08 23:33:59,887 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=54.1 pTM=0.281 ipTM=0.385 tol=7.77
2024-12-08 23:34:42,547 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=53.7 pTM=0.283 ipTM=0.286 tol=3.42
2024-12-08 23:35:25,205 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=53.9 pTM=0.281 ipTM=0.454 tol=6.71
2024-12-08 23:36:07,874 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=54 pTM=0.281 ipTM=0.288 tol=4.61
2024-12-08 23:36:50,540 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=54.1 pTM=0.282 ipTM=0.445 tol=4.32
2024-12-08 23:36:50,541 alphafold2_multimer_v3_model_5_seed_000 took 1322.7s (30 recycles)
2024-12-08 23:36:51,750 reranking models by 'multimer' metric
2024-12-08 23:36:55,679 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 23:39:30,050 Relaxation took 158.3s
2024-12-08 23:39:30,050 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=53.9 pTM=0.291 ipTM=0.521
2024-12-08 23:42:33,826 Relaxation took 183.8s
2024-12-08 23:42:33,826 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=54.4 pTM=0.281 ipTM=0.495
2024-12-08 23:44:46,545 Relaxation took 132.7s
2024-12-08 23:44:46,545 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=54.1 pTM=0.285 ipTM=0.484
2024-12-08 23:47:44,971 Relaxation took 178.4s
2024-12-08 23:47:44,972 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=53 pTM=0.274 ipTM=0.448
2024-12-08 23:51:04,497 Relaxation took 199.5s
2024-12-08 23:51:04,497 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=54.1 pTM=0.282 ipTM=0.445
2024-12-08 23:51:07,434 Done