2024-12-08 21:48:29,759 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-08 21:48:30,068 Running on GPU 2024-12-08 21:48:34,023 Found 6 citations for tools or databases 2024-12-08 21:48:34,023 Query 1/1: TRIM24_ZNF776 (length 1568) 2024-12-08 21:48:34,303 Sleeping for 5s. Reason: PENDING 2024-12-08 21:48:39,562 Sleeping for 10s. Reason: RUNNING 2024-12-08 21:48:49,838 Sleeping for 10s. Reason: RUNNING 2024-12-08 21:49:00,096 Sleeping for 7s. Reason: RUNNING 2024-12-08 21:49:07,358 Sleeping for 5s. Reason: RUNNING 2024-12-08 21:49:12,615 Sleeping for 10s. Reason: RUNNING 2024-12-08 21:49:22,877 Sleeping for 10s. Reason: RUNNING 2024-12-08 21:49:33,135 Sleeping for 8s. Reason: RUNNING 2024-12-08 21:49:41,395 Sleeping for 6s. Reason: RUNNING 2024-12-08 21:49:47,653 Sleeping for 7s. Reason: RUNNING 2024-12-08 21:49:54,917 Sleeping for 5s. Reason: RUNNING 2024-12-08 21:50:00,181 Sleeping for 7s. Reason: RUNNING 2024-12-08 21:50:07,438 Sleeping for 5s. Reason: RUNNING 2024-12-08 21:50:12,692 Sleeping for 9s. Reason: RUNNING 2024-12-08 21:50:21,946 Sleeping for 8s. Reason: RUNNING 2024-12-08 21:50:30,215 Sleeping for 6s. Reason: RUNNING 2024-12-08 21:50:36,471 Sleeping for 8s. Reason: RUNNING 2024-12-08 21:50:44,741 Sleeping for 8s. Reason: RUNNING 2024-12-08 21:50:53,000 Sleeping for 7s. Reason: RUNNING 2024-12-08 21:51:00,249 Sleeping for 7s. Reason: RUNNING 2024-12-08 21:51:07,510 Sleeping for 5s. Reason: RUNNING 2024-12-08 21:51:12,761 Sleeping for 10s. Reason: RUNNING 2024-12-08 21:51:23,022 Sleeping for 5s. Reason: RUNNING 2024-12-08 21:51:28,273 Sleeping for 6s. Reason: RUNNING 2024-12-08 21:51:34,523 Sleeping for 6s. Reason: RUNNING 2024-12-08 21:51:40,778 Sleeping for 10s. Reason: RUNNING 2024-12-08 21:51:51,032 Sleeping for 10s. Reason: RUNNING 2024-12-08 21:52:01,297 Sleeping for 5s. Reason: RUNNING 2024-12-08 21:52:06,555 Sleeping for 5s. Reason: RUNNING 2024-12-08 21:52:11,806 Sleeping for 8s. Reason: RUNNING 2024-12-08 21:52:20,061 Sleeping for 7s. Reason: RUNNING 2024-12-08 21:52:27,316 Sleeping for 8s. Reason: RUNNING 2024-12-08 21:52:35,575 Sleeping for 9s. Reason: RUNNING 2024-12-08 21:52:44,835 Sleeping for 7s. Reason: RUNNING 2024-12-08 21:52:52,099 Sleeping for 8s. Reason: RUNNING 2024-12-08 21:53:00,363 Sleeping for 8s. Reason: RUNNING 2024-12-08 21:53:08,618 Sleeping for 9s. Reason: RUNNING 2024-12-08 21:53:17,873 Sleeping for 7s. Reason: RUNNING 2024-12-08 21:53:25,130 Sleeping for 9s. Reason: RUNNING 2024-12-08 21:53:34,389 Sleeping for 5s. Reason: RUNNING 2024-12-08 21:53:39,652 Sleeping for 7s. Reason: RUNNING 2024-12-08 21:53:46,908 Sleeping for 8s. Reason: RUNNING 2024-12-08 21:53:55,164 Sleeping for 7s. Reason: RUNNING 2024-12-08 21:54:02,420 Sleeping for 5s. Reason: RUNNING 2024-12-08 21:54:07,673 Sleeping for 5s. Reason: RUNNING 2024-12-08 21:54:12,925 Sleeping for 10s. Reason: RUNNING 2024-12-08 21:54:25,059 Sleeping for 9s. Reason: PENDING 2024-12-08 21:54:34,319 Sleeping for 5s. Reason: RUNNING 2024-12-08 21:54:39,572 Sleeping for 8s. Reason: RUNNING 2024-12-08 21:54:47,827 Sleeping for 8s. Reason: RUNNING 2024-12-08 21:54:56,084 Sleeping for 8s. Reason: RUNNING 2024-12-08 21:55:04,339 Sleeping for 6s. Reason: RUNNING 2024-12-08 21:55:10,592 Sleeping for 5s. Reason: RUNNING 2024-12-08 21:55:15,848 Sleeping for 5s. Reason: RUNNING 2024-12-08 21:55:21,097 Sleeping for 5s. Reason: RUNNING 2024-12-08 21:55:26,348 Sleeping for 6s. Reason: RUNNING 2024-12-08 21:55:32,602 Sleeping for 10s. Reason: RUNNING 2024-12-08 21:55:42,859 Sleeping for 9s. Reason: RUNNING 2024-12-08 21:55:52,117 Sleeping for 5s. Reason: RUNNING 2024-12-08 21:55:57,369 Sleeping for 10s. Reason: RUNNING 2024-12-08 21:56:07,635 Sleeping for 5s. Reason: RUNNING 2024-12-08 21:56:12,892 Sleeping for 10s. Reason: RUNNING 2024-12-08 21:56:23,161 Sleeping for 9s. Reason: RUNNING 2024-12-08 21:56:32,419 Sleeping for 6s. Reason: RUNNING 2024-12-08 21:56:38,675 Sleeping for 9s. Reason: RUNNING 2024-12-08 21:56:47,933 Sleeping for 6s. Reason: RUNNING 2024-12-08 21:56:54,188 Sleeping for 8s. Reason: RUNNING 2024-12-08 21:57:02,449 Sleeping for 7s. Reason: RUNNING 2024-12-08 21:57:09,707 Sleeping for 7s. Reason: RUNNING 2024-12-08 21:57:16,967 Sleeping for 8s. Reason: RUNNING 2024-12-08 21:57:25,226 Sleeping for 5s. Reason: RUNNING 2024-12-08 21:57:30,484 Sleeping for 10s. Reason: RUNNING 2024-12-08 21:57:47,129 Setting max_seq=508, max_extra_seq=2048 2024-12-08 22:00:53,394 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=45 pTM=0.297 ipTM=0.23 2024-12-08 22:02:04,818 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=43.4 pTM=0.302 ipTM=0.209 tol=15.3 2024-12-08 22:03:16,274 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=42.2 pTM=0.282 ipTM=0.199 tol=10.7 2024-12-08 22:04:27,755 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=42.1 pTM=0.291 ipTM=0.2 tol=8.25 2024-12-08 22:05:39,233 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=42.2 pTM=0.289 ipTM=0.206 tol=6.02 2024-12-08 22:06:50,836 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=43.8 pTM=0.264 ipTM=0.21 tol=20.8 2024-12-08 22:08:02,337 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=45.1 pTM=0.279 ipTM=0.25 tol=6.8 2024-12-08 22:09:13,838 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=45.5 pTM=0.28 ipTM=0.252 tol=4.57 2024-12-08 22:10:25,344 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=45.6 pTM=0.279 ipTM=0.251 tol=5.71 2024-12-08 22:11:36,828 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=45.6 pTM=0.279 ipTM=0.251 tol=8.28 2024-12-08 22:12:48,254 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=45.3 pTM=0.28 ipTM=0.251 tol=5.98 2024-12-08 22:13:59,728 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=45.6 pTM=0.281 ipTM=0.252 tol=3.63 2024-12-08 22:15:11,187 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=45.5 pTM=0.28 ipTM=0.251 tol=3.93 2024-12-08 22:16:22,645 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=45.6 pTM=0.278 ipTM=0.251 tol=4.43 2024-12-08 22:17:34,121 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=45.5 pTM=0.277 ipTM=0.249 tol=3.38 2024-12-08 22:18:45,614 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=45.5 pTM=0.28 ipTM=0.251 tol=4.29 2024-12-08 22:19:57,102 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=45.6 pTM=0.277 ipTM=0.249 tol=2.98 2024-12-08 22:21:08,573 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=45.6 pTM=0.278 ipTM=0.252 tol=2.63 2024-12-08 22:22:20,036 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=45.6 pTM=0.279 ipTM=0.251 tol=2.29 2024-12-08 22:23:31,492 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=45.8 pTM=0.277 ipTM=0.25 tol=2.39 2024-12-08 22:24:42,938 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=45.6 pTM=0.277 ipTM=0.249 tol=3.17 2024-12-08 22:25:54,466 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=45.5 pTM=0.278 ipTM=0.249 tol=2.26 2024-12-08 22:27:05,983 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=45.3 pTM=0.278 ipTM=0.25 tol=5.02 2024-12-08 22:28:17,506 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=45.6 pTM=0.279 ipTM=0.251 tol=2.38 2024-12-08 22:29:29,039 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=45.7 pTM=0.278 ipTM=0.25 tol=2.13 2024-12-08 22:30:40,581 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=45.9 pTM=0.279 ipTM=0.25 tol=1.78 2024-12-08 22:31:52,085 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=45.8 pTM=0.277 ipTM=0.249 tol=3.88 2024-12-08 22:33:03,598 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=45.6 pTM=0.275 ipTM=0.247 tol=3.87 2024-12-08 22:34:15,090 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=45.7 pTM=0.276 ipTM=0.246 tol=2.91 2024-12-08 22:35:26,585 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=45.4 pTM=0.278 ipTM=0.25 tol=2.84 2024-12-08 22:36:38,087 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=45.8 pTM=0.279 ipTM=0.25 tol=1.86 2024-12-08 22:36:38,089 alphafold2_multimer_v3_model_1_seed_000 took 2327.5s (30 recycles) 2024-12-08 22:37:51,148 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=42.8 pTM=0.26 ipTM=0.214 2024-12-08 22:39:02,790 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=43.6 pTM=0.262 ipTM=0.237 tol=23.3 2024-12-08 22:40:14,382 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=45.5 pTM=0.281 ipTM=0.239 tol=28 2024-12-08 22:41:25,862 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=45.5 pTM=0.287 ipTM=0.24 tol=8.81 2024-12-08 22:42:37,320 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=45.7 pTM=0.284 ipTM=0.238 tol=6.29 2024-12-08 22:43:48,840 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=45.7 pTM=0.287 ipTM=0.244 tol=6.02 2024-12-08 22:45:00,396 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=45.6 pTM=0.289 ipTM=0.245 tol=7.13 2024-12-08 22:46:11,979 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=45.7 pTM=0.289 ipTM=0.243 tol=7.17 2024-12-08 22:47:23,553 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=46 pTM=0.291 ipTM=0.243 tol=4.64 2024-12-08 22:48:35,096 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=45.8 pTM=0.29 ipTM=0.245 tol=2.73 2024-12-08 22:49:46,633 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=45.7 pTM=0.288 ipTM=0.244 tol=3.67 2024-12-08 22:50:58,184 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=45.7 pTM=0.29 ipTM=0.245 tol=3.11 2024-12-08 22:52:09,733 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=46 pTM=0.291 ipTM=0.248 tol=5.81 2024-12-08 22:53:21,290 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=45.6 pTM=0.291 ipTM=0.249 tol=6.13 2024-12-08 22:54:32,834 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=45.6 pTM=0.29 ipTM=0.247 tol=7.59 2024-12-08 22:55:44,401 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=45.6 pTM=0.29 ipTM=0.245 tol=5.91 2024-12-08 22:56:55,981 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=45.8 pTM=0.289 ipTM=0.248 tol=3.97 2024-12-08 22:58:07,538 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=45.8 pTM=0.293 ipTM=0.254 tol=3.75 2024-12-08 22:59:19,087 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=45.9 pTM=0.292 ipTM=0.253 tol=3.08 2024-12-08 23:00:30,631 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=46.1 pTM=0.293 ipTM=0.254 tol=3.54 2024-12-08 23:01:42,162 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=45.9 pTM=0.292 ipTM=0.253 tol=3.83 2024-12-08 23:02:53,714 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=45.7 pTM=0.292 ipTM=0.256 tol=3.45 2024-12-08 23:04:05,246 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=45.8 pTM=0.293 ipTM=0.26 tol=3.03 2024-12-08 23:05:16,759 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=46 pTM=0.295 ipTM=0.26 tol=2.81 2024-12-08 23:06:28,268 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=45.9 pTM=0.294 ipTM=0.259 tol=2.01 2024-12-08 23:07:39,755 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=46 pTM=0.292 ipTM=0.256 tol=2.1 2024-12-08 23:08:51,236 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=45.9 pTM=0.293 ipTM=0.256 tol=2.55 2024-12-08 23:10:02,755 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=46 pTM=0.292 ipTM=0.258 tol=3.66 2024-12-08 23:11:14,301 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=45.8 pTM=0.293 ipTM=0.255 tol=2.71 2024-12-08 23:12:25,848 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=45.9 pTM=0.294 ipTM=0.257 tol=2.49 2024-12-08 23:13:37,397 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=46 pTM=0.293 ipTM=0.254 tol=2.18 2024-12-08 23:13:37,398 alphafold2_multimer_v3_model_2_seed_000 took 2217.9s (30 recycles) 2024-12-08 23:14:50,636 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=44.3 pTM=0.261 ipTM=0.217 2024-12-08 23:16:02,434 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=44.1 pTM=0.273 ipTM=0.241 tol=32.2 2024-12-08 23:17:14,121 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=44.8 pTM=0.292 ipTM=0.251 tol=13.2 2024-12-08 23:18:25,819 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=44.9 pTM=0.298 ipTM=0.271 tol=10.2 2024-12-08 23:19:37,540 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=44.8 pTM=0.296 ipTM=0.27 tol=8.13 2024-12-08 23:20:49,268 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=45 pTM=0.293 ipTM=0.269 tol=5.83 2024-12-08 23:22:00,990 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=45 pTM=0.295 ipTM=0.27 tol=6.79 2024-12-08 23:23:12,815 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=45.2 pTM=0.296 ipTM=0.271 tol=3.21 2024-12-08 23:24:24,661 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=45.1 pTM=0.295 ipTM=0.267 tol=2.7 2024-12-08 23:25:36,402 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=45 pTM=0.294 ipTM=0.266 tol=2.35 2024-12-08 23:26:48,138 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=45.1 pTM=0.295 ipTM=0.262 tol=2.46 2024-12-08 23:27:59,930 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=44.8 pTM=0.295 ipTM=0.265 tol=2.14 2024-12-08 23:29:11,739 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=45.1 pTM=0.295 ipTM=0.264 tol=2.9 2024-12-08 23:30:23,528 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=44.9 pTM=0.295 ipTM=0.261 tol=2.61 2024-12-08 23:31:35,342 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=44.6 pTM=0.295 ipTM=0.264 tol=2.4 2024-12-08 23:32:47,144 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=44.7 pTM=0.294 ipTM=0.257 tol=2.45 2024-12-08 23:33:58,963 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=44.7 pTM=0.296 ipTM=0.268 tol=2.3 2024-12-08 23:35:10,754 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=44.6 pTM=0.298 ipTM=0.268 tol=2.06 2024-12-08 23:36:22,534 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=44.7 pTM=0.296 ipTM=0.264 tol=2.48 2024-12-08 23:37:34,350 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=44.9 pTM=0.296 ipTM=0.27 tol=2.04 2024-12-08 23:38:46,142 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=44.7 pTM=0.295 ipTM=0.268 tol=2.39 2024-12-08 23:39:57,927 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=44.7 pTM=0.295 ipTM=0.268 tol=2.48 2024-12-08 23:41:09,712 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=44.6 pTM=0.296 ipTM=0.269 tol=2.45 2024-12-08 23:42:21,524 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=44.6 pTM=0.296 ipTM=0.266 tol=2.01 2024-12-08 23:43:33,287 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=44.8 pTM=0.298 ipTM=0.272 tol=3.03 2024-12-08 23:44:45,070 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=44.9 pTM=0.295 ipTM=0.267 tol=2.83 2024-12-08 23:45:56,847 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=44.8 pTM=0.295 ipTM=0.266 tol=2.66 2024-12-08 23:47:08,626 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=44.8 pTM=0.296 ipTM=0.271 tol=2.19 2024-12-08 23:48:20,417 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=44.9 pTM=0.297 ipTM=0.269 tol=2.57 2024-12-08 23:49:32,171 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=44.8 pTM=0.296 ipTM=0.268 tol=2.58 2024-12-08 23:50:43,937 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=44.7 pTM=0.295 ipTM=0.264 tol=2.43 2024-12-08 23:50:43,939 alphafold2_multimer_v3_model_3_seed_000 took 2225.1s (30 recycles) 2024-12-08 23:51:57,309 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=43.9 pTM=0.307 ipTM=0.232 2024-12-08 23:53:09,415 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=44.8 pTM=0.256 ipTM=0.209 tol=37.9 2024-12-08 23:54:21,505 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=45.3 pTM=0.254 ipTM=0.215 tol=30.8 2024-12-08 23:55:33,510 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=46.5 pTM=0.266 ipTM=0.233 tol=12.7 2024-12-08 23:56:45,491 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=47.1 pTM=0.273 ipTM=0.236 tol=10.2 2024-12-08 23:57:57,472 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=47 pTM=0.274 ipTM=0.233 tol=6.41 2024-12-08 23:59:09,449 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=47.4 pTM=0.279 ipTM=0.239 tol=5.32 2024-12-09 00:00:21,446 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=47.4 pTM=0.278 ipTM=0.237 tol=5.14 2024-12-09 00:01:33,455 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=46.9 pTM=0.277 ipTM=0.24 tol=5.32 2024-12-09 00:02:45,435 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=47.4 pTM=0.28 ipTM=0.24 tol=4.91 2024-12-09 00:03:57,421 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=47.5 pTM=0.279 ipTM=0.237 tol=4.48 2024-12-09 00:05:09,438 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=47.2 pTM=0.279 ipTM=0.239 tol=4.89 2024-12-09 00:06:21,415 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=47.2 pTM=0.281 ipTM=0.24 tol=4.24 2024-12-09 00:07:33,315 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=47.7 pTM=0.281 ipTM=0.241 tol=3.64 2024-12-09 00:08:45,214 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=47.2 pTM=0.278 ipTM=0.236 tol=3.04 2024-12-09 00:09:57,179 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=47.6 pTM=0.281 ipTM=0.242 tol=3.85 2024-12-09 00:11:09,092 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=47.7 pTM=0.281 ipTM=0.242 tol=3.9 2024-12-09 00:12:21,028 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=47.5 pTM=0.281 ipTM=0.242 tol=3.34 2024-12-09 00:13:33,005 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=47.4 pTM=0.282 ipTM=0.243 tol=2.62 2024-12-09 00:14:44,955 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=47.3 pTM=0.281 ipTM=0.24 tol=2.12 2024-12-09 00:15:56,898 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=47.3 pTM=0.279 ipTM=0.237 tol=2.83 2024-12-09 00:17:08,851 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=47.1 pTM=0.279 ipTM=0.237 tol=2.96 2024-12-09 00:18:20,788 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=47.5 pTM=0.281 ipTM=0.241 tol=3.87 2024-12-09 00:19:32,720 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=47.8 pTM=0.279 ipTM=0.24 tol=7.73 2024-12-09 00:20:44,688 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=47.2 pTM=0.277 ipTM=0.236 tol=7.68 2024-12-09 00:21:56,651 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=47.4 pTM=0.28 ipTM=0.238 tol=3.79 2024-12-09 00:23:08,578 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=47.2 pTM=0.281 ipTM=0.241 tol=3.06 2024-12-09 00:24:20,506 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=47.2 pTM=0.28 ipTM=0.242 tol=3.05 2024-12-09 00:25:32,477 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=47.1 pTM=0.279 ipTM=0.238 tol=2.95 2024-12-09 00:26:44,420 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=47.4 pTM=0.281 ipTM=0.237 tol=4.56 2024-12-09 00:27:56,332 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=47.5 pTM=0.281 ipTM=0.238 tol=3.91 2024-12-09 00:27:56,333 alphafold2_multimer_v3_model_4_seed_000 took 2230.9s (30 recycles) 2024-12-09 00:29:09,700 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=44 pTM=0.255 ipTM=0.201 2024-12-09 00:30:21,468 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=44.9 pTM=0.267 ipTM=0.23 tol=27.7 2024-12-09 00:31:33,230 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=45.4 pTM=0.283 ipTM=0.252 tol=7.49 2024-12-09 00:32:45,015 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=45.2 pTM=0.286 ipTM=0.264 tol=5.13 2024-12-09 00:33:56,773 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=45.5 pTM=0.287 ipTM=0.265 tol=5.09 2024-12-09 00:35:08,538 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=45.5 pTM=0.288 ipTM=0.264 tol=5.85 2024-12-09 00:36:20,313 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=45.6 pTM=0.288 ipTM=0.264 tol=6.79 2024-12-09 00:37:32,130 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=45.8 pTM=0.288 ipTM=0.265 tol=6.22 2024-12-09 00:38:43,937 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=45.7 pTM=0.287 ipTM=0.263 tol=4.16 2024-12-09 00:39:55,754 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=45.7 pTM=0.287 ipTM=0.261 tol=4.54 2024-12-09 00:41:07,561 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=46.1 pTM=0.287 ipTM=0.262 tol=5.02 2024-12-09 00:42:19,323 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=45.7 pTM=0.289 ipTM=0.265 tol=4.4 2024-12-09 00:43:31,113 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=45.9 pTM=0.288 ipTM=0.263 tol=3.75 2024-12-09 00:44:42,883 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=45.8 pTM=0.287 ipTM=0.262 tol=5.16 2024-12-09 00:45:54,678 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=45.5 pTM=0.287 ipTM=0.263 tol=7.08 2024-12-09 00:47:06,455 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=45.8 pTM=0.287 ipTM=0.261 tol=5.82 2024-12-09 00:48:18,224 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=45.7 pTM=0.287 ipTM=0.261 tol=3.81 2024-12-09 00:49:29,900 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=45.7 pTM=0.288 ipTM=0.263 tol=3.4 2024-12-09 00:50:41,607 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=45.7 pTM=0.286 ipTM=0.259 tol=2.76 2024-12-09 00:51:53,324 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=45.9 pTM=0.288 ipTM=0.264 tol=4.04 2024-12-09 00:53:05,032 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=45.8 pTM=0.286 ipTM=0.261 tol=5.85 2024-12-09 00:54:16,731 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=45.6 pTM=0.285 ipTM=0.262 tol=6.57 2024-12-09 00:55:28,422 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=45.4 pTM=0.286 ipTM=0.262 tol=3.49 2024-12-09 00:56:40,157 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=45.6 pTM=0.287 ipTM=0.264 tol=5.5 2024-12-09 00:57:51,898 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=45.8 pTM=0.29 ipTM=0.271 tol=3.52 2024-12-09 00:59:03,590 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=45.8 pTM=0.288 ipTM=0.267 tol=8.27 2024-12-09 01:00:15,325 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=45.8 pTM=0.286 ipTM=0.264 tol=5.88 2024-12-09 01:01:27,044 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=46 pTM=0.287 ipTM=0.266 tol=6.19 2024-12-09 01:02:38,777 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=45.8 pTM=0.287 ipTM=0.264 tol=5.45 2024-12-09 01:03:50,459 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=45.7 pTM=0.289 ipTM=0.264 tol=4.82 2024-12-09 01:05:02,264 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=45.8 pTM=0.288 ipTM=0.262 tol=4.46 2024-12-09 01:05:02,265 alphafold2_multimer_v3_model_5_seed_000 took 2224.5s (30 recycles) 2024-12-09 01:05:03,729 reranking models by 'multimer' metric 2024-12-09 01:05:07,042 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-09 01:09:47,464 Relaxation took 283.7s 2024-12-09 01:09:47,464 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=44.7 pTM=0.295 ipTM=0.264 2024-12-09 01:15:36,819 Relaxation took 349.4s 2024-12-09 01:15:36,819 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=45.8 pTM=0.288 ipTM=0.262 2024-12-09 01:20:56,072 Relaxation took 319.3s 2024-12-09 01:20:56,072 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=46 pTM=0.293 ipTM=0.254 2024-12-09 01:25:27,025 Relaxation took 271.0s 2024-12-09 01:25:27,025 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=45.8 pTM=0.279 ipTM=0.25 2024-12-09 01:29:14,364 Relaxation took 227.3s 2024-12-09 01:29:14,364 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=47.5 pTM=0.281 ipTM=0.238 2024-12-09 01:29:17,834 Done