2024-12-08 21:55:59,211 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 21:55:59,684 Running on GPU
2024-12-08 21:56:04,298 Found 6 citations for tools or databases
2024-12-08 21:56:04,298 Query 1/1: TRIM27_LZTS2 (length 1182)
2024-12-08 21:56:06,284 Sleeping for 8s. Reason: PENDING
2024-12-08 21:56:14,541 Sleeping for 5s. Reason: RUNNING
2024-12-08 21:56:19,793 Sleeping for 5s. Reason: RUNNING
2024-12-08 21:56:25,047 Sleeping for 9s. Reason: RUNNING
2024-12-08 21:56:34,305 Sleeping for 8s. Reason: RUNNING
2024-12-08 21:56:42,567 Sleeping for 9s. Reason: RUNNING
2024-12-08 21:56:51,828 Sleeping for 6s. Reason: RUNNING
2024-12-08 21:56:58,079 Sleeping for 6s. Reason: RUNNING
2024-12-08 21:57:04,334 Sleeping for 9s. Reason: RUNNING
2024-12-08 21:57:13,597 Sleeping for 10s. Reason: RUNNING
2024-12-08 21:57:23,864 Sleeping for 8s. Reason: RUNNING
2024-12-08 21:57:32,121 Sleeping for 8s. Reason: RUNNING
2024-12-08 21:57:40,382 Sleeping for 10s. Reason: RUNNING
2024-12-08 21:57:55,287 Setting max_seq=508, max_extra_seq=2048
2024-12-08 22:00:56,113 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=52.9 pTM=0.312 ipTM=0.296
2024-12-08 22:01:29,104 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=55.1 pTM=0.319 ipTM=0.349 tol=25.6
2024-12-08 22:02:02,266 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=55.5 pTM=0.317 ipTM=0.362 tol=11.5
2024-12-08 22:02:35,581 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=55.4 pTM=0.318 ipTM=0.371 tol=8.95
2024-12-08 22:03:08,942 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=55.4 pTM=0.321 ipTM=0.388 tol=7.05
2024-12-08 22:03:42,339 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=55.3 pTM=0.325 ipTM=0.399 tol=10.2
2024-12-08 22:04:15,766 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=55.1 pTM=0.324 ipTM=0.401 tol=5.6
2024-12-08 22:04:49,197 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=54.9 pTM=0.327 ipTM=0.408 tol=6.79
2024-12-08 22:05:22,651 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=55 pTM=0.328 ipTM=0.406 tol=10.7
2024-12-08 22:05:56,115 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=54.6 pTM=0.329 ipTM=0.415 tol=9.94
2024-12-08 22:06:29,575 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=54.8 pTM=0.328 ipTM=0.413 tol=6.2
2024-12-08 22:07:03,060 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=55.3 pTM=0.33 ipTM=0.415 tol=5.72
2024-12-08 22:07:36,559 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=55.3 pTM=0.331 ipTM=0.416 tol=4.91
2024-12-08 22:08:10,063 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=55.3 pTM=0.332 ipTM=0.414 tol=5.21
2024-12-08 22:08:43,550 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=55.5 pTM=0.333 ipTM=0.417 tol=4.3
2024-12-08 22:09:17,034 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=55.6 pTM=0.335 ipTM=0.418 tol=4.32
2024-12-08 22:09:50,495 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=55.9 pTM=0.335 ipTM=0.418 tol=3.42
2024-12-08 22:10:23,953 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=55.8 pTM=0.336 ipTM=0.422 tol=4.42
2024-12-08 22:10:57,411 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=55.8 pTM=0.337 ipTM=0.425 tol=4.38
2024-12-08 22:11:30,886 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=55.5 pTM=0.336 ipTM=0.422 tol=3.44
2024-12-08 22:12:04,383 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=55.5 pTM=0.335 ipTM=0.422 tol=4.61
2024-12-08 22:12:37,876 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=55.7 pTM=0.335 ipTM=0.419 tol=5.7
2024-12-08 22:13:11,364 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=55.7 pTM=0.334 ipTM=0.418 tol=3.43
2024-12-08 22:13:44,844 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=55.8 pTM=0.334 ipTM=0.418 tol=5.16
2024-12-08 22:14:18,303 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=55.8 pTM=0.334 ipTM=0.42 tol=3.97
2024-12-08 22:14:51,768 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=55.7 pTM=0.331 ipTM=0.414 tol=7.42
2024-12-08 22:15:25,233 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=55.9 pTM=0.335 ipTM=0.423 tol=4.77
2024-12-08 22:15:58,703 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=55.8 pTM=0.333 ipTM=0.416 tol=5.5
2024-12-08 22:16:32,189 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=55.5 pTM=0.334 ipTM=0.419 tol=7.11
2024-12-08 22:17:05,688 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=56.2 pTM=0.332 ipTM=0.412 tol=6.23
2024-12-08 22:17:39,197 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=56.2 pTM=0.333 ipTM=0.418 tol=2.99
2024-12-08 22:17:39,198 alphafold2_multimer_v3_model_1_seed_000 took 1179.2s (30 recycles)
2024-12-08 22:18:13,443 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=53.8 pTM=0.331 ipTM=0.223
2024-12-08 22:18:46,880 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=56.9 pTM=0.346 ipTM=0.369 tol=25.5
2024-12-08 22:19:20,298 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=57.4 pTM=0.353 ipTM=0.411 tol=8.88
2024-12-08 22:19:53,700 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=57.5 pTM=0.353 ipTM=0.428 tol=7.34
2024-12-08 22:20:27,111 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=57.8 pTM=0.357 ipTM=0.443 tol=3.98
2024-12-08 22:21:00,524 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=57.7 pTM=0.354 ipTM=0.442 tol=4.11
2024-12-08 22:21:33,938 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=57.7 pTM=0.354 ipTM=0.439 tol=3.41
2024-12-08 22:22:07,324 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=57.6 pTM=0.355 ipTM=0.441 tol=2.93
2024-12-08 22:22:40,723 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=57.7 pTM=0.356 ipTM=0.444 tol=2.75
2024-12-08 22:23:14,133 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=57.7 pTM=0.357 ipTM=0.448 tol=3.24
2024-12-08 22:23:47,559 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=57.7 pTM=0.358 ipTM=0.451 tol=2.66
2024-12-08 22:24:20,977 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=57.8 pTM=0.356 ipTM=0.446 tol=2.24
2024-12-08 22:24:54,368 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=57.7 pTM=0.358 ipTM=0.448 tol=1.97
2024-12-08 22:25:27,744 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=57.7 pTM=0.356 ipTM=0.448 tol=2.32
2024-12-08 22:26:01,141 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=57.9 pTM=0.358 ipTM=0.452 tol=2.47
2024-12-08 22:26:34,541 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=57.9 pTM=0.359 ipTM=0.45 tol=1.69
2024-12-08 22:27:07,964 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=57.9 pTM=0.359 ipTM=0.449 tol=2.39
2024-12-08 22:27:41,381 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=57.9 pTM=0.361 ipTM=0.456 tol=2.06
2024-12-08 22:28:14,836 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=57.9 pTM=0.361 ipTM=0.458 tol=2.97
2024-12-08 22:28:48,299 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=58 pTM=0.362 ipTM=0.455 tol=3.44
2024-12-08 22:29:21,798 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=57.6 pTM=0.36 ipTM=0.455 tol=2.65
2024-12-08 22:29:55,268 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=57.9 pTM=0.36 ipTM=0.457 tol=2.3
2024-12-08 22:30:28,700 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=57.8 pTM=0.36 ipTM=0.453 tol=2.08
2024-12-08 22:31:02,159 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=57.9 pTM=0.359 ipTM=0.451 tol=3.13
2024-12-08 22:31:35,585 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=57.8 pTM=0.361 ipTM=0.454 tol=3.46
2024-12-08 22:32:09,025 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=57.8 pTM=0.359 ipTM=0.451 tol=1.93
2024-12-08 22:32:42,468 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=57.8 pTM=0.359 ipTM=0.456 tol=2.94
2024-12-08 22:33:15,913 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=57.8 pTM=0.358 ipTM=0.451 tol=2.88
2024-12-08 22:33:49,353 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=57.6 pTM=0.358 ipTM=0.452 tol=2.37
2024-12-08 22:34:22,812 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=58 pTM=0.357 ipTM=0.448 tol=2.38
2024-12-08 22:34:56,285 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=57.9 pTM=0.358 ipTM=0.45 tol=3.08
2024-12-08 22:34:56,286 alphafold2_multimer_v3_model_2_seed_000 took 1036.2s (30 recycles)
2024-12-08 22:35:30,687 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=50.1 pTM=0.31 ipTM=0.14
2024-12-08 22:36:04,213 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=51.9 pTM=0.339 ipTM=0.19 tol=27.6
2024-12-08 22:36:37,710 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=52 pTM=0.323 ipTM=0.148 tol=14.8
2024-12-08 22:37:11,262 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=51.7 pTM=0.321 ipTM=0.172 tol=9.48
2024-12-08 22:37:44,828 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=51.8 pTM=0.318 ipTM=0.162 tol=9.72
2024-12-08 22:38:18,405 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=51.8 pTM=0.316 ipTM=0.167 tol=7.68
2024-12-08 22:38:51,988 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=51.7 pTM=0.318 ipTM=0.175 tol=6.47
2024-12-08 22:39:25,582 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=51.8 pTM=0.319 ipTM=0.165 tol=7.77
2024-12-08 22:39:59,190 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=51.9 pTM=0.321 ipTM=0.168 tol=4.31
2024-12-08 22:40:32,785 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=51.8 pTM=0.324 ipTM=0.164 tol=5.07
2024-12-08 22:41:06,332 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=51.8 pTM=0.324 ipTM=0.169 tol=4.9
2024-12-08 22:41:39,846 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=51.8 pTM=0.324 ipTM=0.166 tol=3.89
2024-12-08 22:42:13,379 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=51.7 pTM=0.325 ipTM=0.162 tol=4.11
2024-12-08 22:42:46,893 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=51.6 pTM=0.327 ipTM=0.164 tol=3.28
2024-12-08 22:43:20,459 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=51.9 pTM=0.329 ipTM=0.163 tol=3.57
2024-12-08 22:43:53,992 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=51.9 pTM=0.333 ipTM=0.165 tol=2.86
2024-12-08 22:44:27,554 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=52.1 pTM=0.335 ipTM=0.165 tol=3.02
2024-12-08 22:45:01,067 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=51.8 pTM=0.336 ipTM=0.165 tol=2.87
2024-12-08 22:45:34,641 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=52.2 pTM=0.336 ipTM=0.165 tol=3.67
2024-12-08 22:46:08,197 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=51.8 pTM=0.341 ipTM=0.171 tol=4.29
2024-12-08 22:46:41,772 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=52 pTM=0.34 ipTM=0.172 tol=3.59
2024-12-08 22:47:15,374 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=52.4 pTM=0.341 ipTM=0.168 tol=4.45
2024-12-08 22:47:48,931 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=52.3 pTM=0.344 ipTM=0.175 tol=4.49
2024-12-08 22:48:22,500 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=52.2 pTM=0.344 ipTM=0.176 tol=4.43
2024-12-08 22:48:56,048 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=52.5 pTM=0.344 ipTM=0.171 tol=3.12
2024-12-08 22:49:29,595 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=52.6 pTM=0.345 ipTM=0.175 tol=3.14
2024-12-08 22:50:03,143 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=52.4 pTM=0.343 ipTM=0.176 tol=3.11
2024-12-08 22:50:36,686 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=52.7 pTM=0.344 ipTM=0.174 tol=4.11
2024-12-08 22:51:10,140 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=52.4 pTM=0.343 ipTM=0.173 tol=3.28
2024-12-08 22:51:43,610 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=52.7 pTM=0.344 ipTM=0.174 tol=2.57
2024-12-08 22:52:17,075 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=52.5 pTM=0.341 ipTM=0.17 tol=2.73
2024-12-08 22:52:17,076 alphafold2_multimer_v3_model_3_seed_000 took 1039.9s (30 recycles)
2024-12-08 22:52:51,515 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=44.1 pTM=0.291 ipTM=0.2
2024-12-08 22:53:25,129 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=45.8 pTM=0.304 ipTM=0.207 tol=25.9
2024-12-08 22:53:58,628 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=49.6 pTM=0.308 ipTM=0.357 tol=31
2024-12-08 22:54:32,160 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=50.2 pTM=0.312 ipTM=0.353 tol=18.2
2024-12-08 22:55:05,651 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=51 pTM=0.317 ipTM=0.361 tol=9.35
2024-12-08 22:55:39,156 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=50.8 pTM=0.31 ipTM=0.347 tol=8.43
2024-12-08 22:56:12,696 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=50.9 pTM=0.305 ipTM=0.351 tol=7.39
2024-12-08 22:56:46,253 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=50.9 pTM=0.308 ipTM=0.351 tol=8.51
2024-12-08 22:57:19,779 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=50.8 pTM=0.306 ipTM=0.349 tol=3.97
2024-12-08 22:57:53,344 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=50.6 pTM=0.308 ipTM=0.351 tol=7.93
2024-12-08 22:58:26,872 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=50.2 pTM=0.302 ipTM=0.345 tol=6.2
2024-12-08 22:59:00,429 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=50.2 pTM=0.304 ipTM=0.345 tol=5.43
2024-12-08 22:59:33,963 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=49.8 pTM=0.305 ipTM=0.341 tol=5.82
2024-12-08 23:00:07,486 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=49.7 pTM=0.305 ipTM=0.335 tol=8.73
2024-12-08 23:00:41,028 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=49.5 pTM=0.301 ipTM=0.329 tol=9.62
2024-12-08 23:01:14,538 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=49.2 pTM=0.302 ipTM=0.33 tol=6.71
2024-12-08 23:01:48,020 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=49.7 pTM=0.309 ipTM=0.329 tol=8.52
2024-12-08 23:02:21,498 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=48.8 pTM=0.303 ipTM=0.324 tol=5.86
2024-12-08 23:02:55,014 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=49.7 pTM=0.303 ipTM=0.325 tol=5.3
2024-12-08 23:03:28,500 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=49.1 pTM=0.302 ipTM=0.319 tol=6.39
2024-12-08 23:04:02,023 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=48.8 pTM=0.301 ipTM=0.317 tol=5.52
2024-12-08 23:04:35,559 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=40.4 pTM=0.3 ipTM=0.311 tol=36.9
2024-12-08 23:05:09,204 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=45.5 pTM=0.282 ipTM=0.196 tol=30.7
2024-12-08 23:05:42,764 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=49.2 pTM=0.302 ipTM=0.333 tol=23.7
2024-12-08 23:06:16,289 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=48.9 pTM=0.3 ipTM=0.329 tol=11.5
2024-12-08 23:06:49,847 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=49 pTM=0.298 ipTM=0.325 tol=8.75
2024-12-08 23:07:23,362 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=48.8 pTM=0.302 ipTM=0.324 tol=8.58
2024-12-08 23:07:56,888 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=48.7 pTM=0.302 ipTM=0.317 tol=9.94
2024-12-08 23:08:30,409 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=48.5 pTM=0.3 ipTM=0.314 tol=7.88
2024-12-08 23:09:03,978 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=48.8 pTM=0.299 ipTM=0.31 tol=10.5
2024-12-08 23:09:37,583 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=48.5 pTM=0.297 ipTM=0.306 tol=10.4
2024-12-08 23:09:37,584 alphafold2_multimer_v3_model_4_seed_000 took 1039.7s (30 recycles)
2024-12-08 23:10:12,083 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=49.1 pTM=0.302 ipTM=0.137
2024-12-08 23:10:45,779 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=51 pTM=0.319 ipTM=0.208 tol=29.2
2024-12-08 23:11:19,422 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=51.8 pTM=0.317 ipTM=0.24 tol=14.9
2024-12-08 23:11:53,072 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=50.6 pTM=0.305 ipTM=0.341 tol=31.3
2024-12-08 23:12:26,608 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=51.7 pTM=0.31 ipTM=0.356 tol=17.5
2024-12-08 23:13:00,133 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=52.2 pTM=0.311 ipTM=0.357 tol=9.11
2024-12-08 23:13:33,651 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=51.9 pTM=0.313 ipTM=0.36 tol=7.57
2024-12-08 23:14:07,168 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=51.7 pTM=0.316 ipTM=0.37 tol=7.2
2024-12-08 23:14:40,614 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=52 pTM=0.317 ipTM=0.375 tol=5.06
2024-12-08 23:15:14,074 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=51.9 pTM=0.323 ipTM=0.387 tol=7.14
2024-12-08 23:15:47,470 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=51.9 pTM=0.322 ipTM=0.385 tol=3.63
2024-12-08 23:16:20,863 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=52 pTM=0.323 ipTM=0.387 tol=3.62
2024-12-08 23:16:54,270 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=51.9 pTM=0.325 ipTM=0.385 tol=3.59
2024-12-08 23:17:27,677 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=52.2 pTM=0.326 ipTM=0.387 tol=3.02
2024-12-08 23:18:01,089 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=52.2 pTM=0.328 ipTM=0.39 tol=5.28
2024-12-08 23:18:34,478 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=52.2 pTM=0.328 ipTM=0.388 tol=6.37
2024-12-08 23:19:07,877 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=52.4 pTM=0.329 ipTM=0.393 tol=6.31
2024-12-08 23:19:41,259 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=52.2 pTM=0.328 ipTM=0.39 tol=5.86
2024-12-08 23:20:14,692 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=52.8 pTM=0.328 ipTM=0.394 tol=7.26
2024-12-08 23:20:48,093 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=52.6 pTM=0.33 ipTM=0.396 tol=6.57
2024-12-08 23:21:21,515 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=52.4 pTM=0.331 ipTM=0.4 tol=5.96
2024-12-08 23:21:54,926 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=52.7 pTM=0.329 ipTM=0.392 tol=4.55
2024-12-08 23:22:28,364 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=52.8 pTM=0.33 ipTM=0.39 tol=3.98
2024-12-08 23:23:01,817 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=52.4 pTM=0.325 ipTM=0.386 tol=5.92
2024-12-08 23:23:35,271 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=52.3 pTM=0.322 ipTM=0.383 tol=5.96
2024-12-08 23:24:08,710 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=52.5 pTM=0.324 ipTM=0.382 tol=4.38
2024-12-08 23:24:42,168 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=53 pTM=0.334 ipTM=0.394 tol=4.43
2024-12-08 23:25:15,612 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=52.2 pTM=0.319 ipTM=0.382 tol=3.57
2024-12-08 23:25:49,044 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=52.6 pTM=0.324 ipTM=0.383 tol=4.97
2024-12-08 23:26:22,493 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=52.8 pTM=0.328 ipTM=0.384 tol=5.65
2024-12-08 23:26:55,934 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=52.7 pTM=0.319 ipTM=0.378 tol=5.62
2024-12-08 23:26:55,936 alphafold2_multimer_v3_model_5_seed_000 took 1037.5s (30 recycles)
2024-12-08 23:26:56,775 reranking models by 'multimer' metric
2024-12-08 23:26:59,331 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 23:28:39,334 Relaxation took 102.6s
2024-12-08 23:28:39,334 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=57.9 pTM=0.358 ipTM=0.45
2024-12-08 23:30:02,803 Relaxation took 83.5s
2024-12-08 23:30:02,803 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=56.2 pTM=0.333 ipTM=0.418
2024-12-08 23:31:32,303 Relaxation took 89.5s
2024-12-08 23:31:32,303 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=52.7 pTM=0.319 ipTM=0.378
2024-12-08 23:33:22,942 Relaxation took 110.6s
2024-12-08 23:33:22,942 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=48.5 pTM=0.297 ipTM=0.306
2024-12-08 23:34:53,845 Relaxation took 90.9s
2024-12-08 23:34:53,845 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=52.5 pTM=0.341 ipTM=0.17
2024-12-08 23:34:56,199 Done