2024-12-08 22:14:11,532 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 22:14:11,839 Running on GPU
2024-12-08 22:14:16,397 Found 6 citations for tools or databases
2024-12-08 22:14:16,397 Query 1/1: TRIM27_NDE1 (length 848)
2024-12-08 22:14:16,691 Sleeping for 5s. Reason: PENDING
2024-12-08 22:14:21,945 Sleeping for 7s. Reason: RUNNING
2024-12-08 22:14:29,198 Sleeping for 8s. Reason: RUNNING
2024-12-08 22:14:37,454 Sleeping for 6s. Reason: RUNNING
2024-12-08 22:14:43,708 Sleeping for 9s. Reason: RUNNING
2024-12-08 22:14:52,967 Sleeping for 9s. Reason: RUNNING
2024-12-08 22:15:02,228 Sleeping for 8s. Reason: RUNNING
2024-12-08 22:15:10,489 Sleeping for 10s. Reason: RUNNING
2024-12-08 22:15:20,745 Sleeping for 9s. Reason: RUNNING
2024-12-08 22:15:30,002 Sleeping for 7s. Reason: RUNNING
2024-12-08 22:15:37,257 Sleeping for 7s. Reason: RUNNING
2024-12-08 22:15:44,505 Sleeping for 8s. Reason: RUNNING
2024-12-08 22:15:52,911 Sleeping for 9s. Reason: RUNNING
2024-12-08 22:16:02,176 Sleeping for 8s. Reason: RUNNING
2024-12-08 22:16:10,428 Sleeping for 10s. Reason: RUNNING
2024-12-08 22:16:20,688 Sleeping for 8s. Reason: RUNNING
2024-12-08 22:16:28,942 Sleeping for 7s. Reason: RUNNING
2024-12-08 22:16:36,202 Sleeping for 9s. Reason: RUNNING
2024-12-08 22:16:45,465 Sleeping for 8s. Reason: RUNNING
2024-12-08 22:16:53,727 Sleeping for 10s. Reason: RUNNING
2024-12-08 22:17:05,161 Sleeping for 8s. Reason: PENDING
2024-12-08 22:17:13,419 Sleeping for 9s. Reason: RUNNING
2024-12-08 22:17:22,683 Sleeping for 9s. Reason: RUNNING
2024-12-08 22:17:31,943 Sleeping for 9s. Reason: RUNNING
2024-12-08 22:17:41,204 Sleeping for 7s. Reason: RUNNING
2024-12-08 22:17:48,468 Sleeping for 9s. Reason: RUNNING
2024-12-08 22:17:57,729 Sleeping for 10s. Reason: RUNNING
2024-12-08 22:18:07,991 Sleeping for 5s. Reason: RUNNING
2024-12-08 22:18:13,247 Sleeping for 7s. Reason: RUNNING
2024-12-08 22:18:20,512 Sleeping for 5s. Reason: RUNNING
2024-12-08 22:18:25,768 Sleeping for 10s. Reason: RUNNING
2024-12-08 22:18:36,027 Sleeping for 5s. Reason: RUNNING
2024-12-08 22:18:41,282 Sleeping for 8s. Reason: RUNNING
2024-12-08 22:18:52,479 Setting max_seq=508, max_extra_seq=2048
2024-12-08 22:20:59,948 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=66.3 pTM=0.397 ipTM=0.306
2024-12-08 22:21:13,262 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=67.7 pTM=0.362 ipTM=0.197 tol=11.8
2024-12-08 22:21:26,589 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=67.2 pTM=0.361 ipTM=0.224 tol=6.29
2024-12-08 22:21:39,929 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=67.3 pTM=0.355 ipTM=0.199 tol=3.3
2024-12-08 22:21:53,284 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=67.1 pTM=0.362 ipTM=0.225 tol=1.81
2024-12-08 22:22:06,659 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=66.9 pTM=0.354 ipTM=0.202 tol=2.08
2024-12-08 22:22:20,052 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=66.9 pTM=0.362 ipTM=0.222 tol=1.57
2024-12-08 22:22:33,453 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=66.9 pTM=0.357 ipTM=0.202 tol=1.5
2024-12-08 22:22:46,856 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=66.5 pTM=0.357 ipTM=0.217 tol=2.53
2024-12-08 22:23:00,272 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=66.2 pTM=0.351 ipTM=0.191 tol=1.46
2024-12-08 22:23:13,690 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=65.8 pTM=0.351 ipTM=0.202 tol=1.61
2024-12-08 22:23:27,104 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=66.1 pTM=0.348 ipTM=0.19 tol=1.59
2024-12-08 22:23:40,528 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=65.6 pTM=0.353 ipTM=0.205 tol=1.51
2024-12-08 22:23:53,972 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=65.8 pTM=0.345 ipTM=0.187 tol=2.23
2024-12-08 22:24:07,393 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=65.3 pTM=0.349 ipTM=0.189 tol=3.11
2024-12-08 22:24:20,828 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=65.8 pTM=0.347 ipTM=0.18 tol=1.76
2024-12-08 22:24:34,277 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=65.5 pTM=0.351 ipTM=0.185 tol=1.37
2024-12-08 22:24:47,719 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=65.6 pTM=0.344 ipTM=0.179 tol=1.79
2024-12-08 22:25:01,154 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=65.1 pTM=0.347 ipTM=0.186 tol=2.46
2024-12-08 22:25:14,593 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=65.4 pTM=0.343 ipTM=0.171 tol=1.67
2024-12-08 22:25:28,037 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=65 pTM=0.342 ipTM=0.176 tol=2.33
2024-12-08 22:25:41,467 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=65.4 pTM=0.341 ipTM=0.178 tol=1.99
2024-12-08 22:25:54,912 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64.9 pTM=0.341 ipTM=0.183 tol=1.54
2024-12-08 22:26:08,352 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=65.3 pTM=0.34 ipTM=0.176 tol=2.46
2024-12-08 22:26:21,789 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=64.9 pTM=0.343 ipTM=0.177 tol=2.35
2024-12-08 22:26:35,243 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=65.4 pTM=0.34 ipTM=0.173 tol=2.55
2024-12-08 22:26:48,697 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=65.1 pTM=0.344 ipTM=0.178 tol=2.24
2024-12-08 22:27:02,155 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=65 pTM=0.34 ipTM=0.17 tol=1.65
2024-12-08 22:27:15,595 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=65.5 pTM=0.344 ipTM=0.184 tol=2.44
2024-12-08 22:27:29,030 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=65.5 pTM=0.342 ipTM=0.176 tol=2.21
2024-12-08 22:27:42,468 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=65.3 pTM=0.344 ipTM=0.188 tol=2.61
2024-12-08 22:27:42,468 alphafold2_multimer_v3_model_1_seed_000 took 524.4s (30 recycles)
2024-12-08 22:27:56,335 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=67.1 pTM=0.395 ipTM=0.219
2024-12-08 22:28:09,765 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=68.1 pTM=0.391 ipTM=0.22 tol=10.2
2024-12-08 22:28:23,193 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=68.2 pTM=0.383 ipTM=0.209 tol=5.49
2024-12-08 22:28:36,627 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=68.2 pTM=0.379 ipTM=0.21 tol=2.46
2024-12-08 22:28:50,069 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=68.5 pTM=0.382 ipTM=0.214 tol=3.03
2024-12-08 22:29:03,496 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=68.3 pTM=0.383 ipTM=0.225 tol=2.57
2024-12-08 22:29:16,924 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=68.8 pTM=0.379 ipTM=0.216 tol=2.67
2024-12-08 22:29:30,353 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=68.9 pTM=0.379 ipTM=0.215 tol=3.34
2024-12-08 22:29:43,796 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=68.9 pTM=0.376 ipTM=0.213 tol=1.1
2024-12-08 22:29:57,224 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=68.9 pTM=0.381 ipTM=0.214 tol=1.19
2024-12-08 22:30:10,660 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=69 pTM=0.376 ipTM=0.212 tol=1.27
2024-12-08 22:30:24,093 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=68.9 pTM=0.378 ipTM=0.215 tol=1.58
2024-12-08 22:30:37,543 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=69.1 pTM=0.381 ipTM=0.215 tol=2.11
2024-12-08 22:30:50,978 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=69.1 pTM=0.377 ipTM=0.216 tol=1.64
2024-12-08 22:31:04,414 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=69.4 pTM=0.384 ipTM=0.215 tol=1.82
2024-12-08 22:31:17,851 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=69.5 pTM=0.385 ipTM=0.219 tol=1.8
2024-12-08 22:31:31,277 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=69.2 pTM=0.394 ipTM=0.27 tol=3.97
2024-12-08 22:31:44,723 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=69.3 pTM=0.378 ipTM=0.228 tol=4.31
2024-12-08 22:31:58,152 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=69.6 pTM=0.387 ipTM=0.229 tol=2.09
2024-12-08 22:32:11,579 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=69.2 pTM=0.396 ipTM=0.272 tol=4.13
2024-12-08 22:32:25,003 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=69.5 pTM=0.381 ipTM=0.226 tol=4.73
2024-12-08 22:32:38,431 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=69.4 pTM=0.382 ipTM=0.227 tol=2.28
2024-12-08 22:32:51,850 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=69 pTM=0.398 ipTM=0.298 tol=4.84
2024-12-08 22:33:05,274 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=69.6 pTM=0.381 ipTM=0.231 tol=4.2
2024-12-08 22:33:18,695 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=69.5 pTM=0.382 ipTM=0.229 tol=1.96
2024-12-08 22:33:32,133 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=69.1 pTM=0.402 ipTM=0.316 tol=4.93
2024-12-08 22:33:45,569 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=69.6 pTM=0.384 ipTM=0.231 tol=4.66
2024-12-08 22:33:58,998 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=69.5 pTM=0.381 ipTM=0.229 tol=2.31
2024-12-08 22:34:12,427 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=69.4 pTM=0.377 ipTM=0.221 tol=1.66
2024-12-08 22:34:25,863 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=69.3 pTM=0.378 ipTM=0.221 tol=1.93
2024-12-08 22:34:39,292 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=69.1 pTM=0.396 ipTM=0.288 tol=3.53
2024-12-08 22:34:39,293 alphafold2_multimer_v3_model_2_seed_000 took 416.4s (30 recycles)
2024-12-08 22:34:53,229 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=63.7 pTM=0.364 ipTM=0.159
2024-12-08 22:35:06,707 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.5 pTM=0.4 ipTM=0.154 tol=18
2024-12-08 22:35:20,199 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=66.8 pTM=0.38 ipTM=0.159 tol=32.1
2024-12-08 22:35:33,700 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=67.2 pTM=0.38 ipTM=0.164 tol=7.01
2024-12-08 22:35:47,177 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=67.5 pTM=0.386 ipTM=0.172 tol=5.98
2024-12-08 22:36:00,662 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=67.4 pTM=0.392 ipTM=0.175 tol=1.8
2024-12-08 22:36:14,138 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=67.6 pTM=0.399 ipTM=0.18 tol=1.52
2024-12-08 22:36:27,615 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=67.7 pTM=0.4 ipTM=0.177 tol=1.95
2024-12-08 22:36:41,093 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=67.8 pTM=0.398 ipTM=0.179 tol=2.55
2024-12-08 22:36:54,569 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=67.5 pTM=0.398 ipTM=0.177 tol=1.99
2024-12-08 22:37:08,049 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=67.5 pTM=0.4 ipTM=0.178 tol=1.56
2024-12-08 22:37:21,525 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=67.4 pTM=0.4 ipTM=0.175 tol=1.26
2024-12-08 22:37:34,994 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=67.4 pTM=0.406 ipTM=0.18 tol=1.75
2024-12-08 22:37:48,468 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=67.6 pTM=0.406 ipTM=0.176 tol=2.02
2024-12-08 22:38:01,940 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=67.5 pTM=0.408 ipTM=0.167 tol=1.66
2024-12-08 22:38:15,401 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=67.6 pTM=0.409 ipTM=0.175 tol=1.73
2024-12-08 22:38:28,866 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=67.2 pTM=0.407 ipTM=0.171 tol=1.46
2024-12-08 22:38:42,331 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=67.4 pTM=0.407 ipTM=0.18 tol=1.3
2024-12-08 22:38:55,790 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=67.2 pTM=0.408 ipTM=0.174 tol=1.83
2024-12-08 22:39:09,242 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=67.4 pTM=0.407 ipTM=0.169 tol=0.971
2024-12-08 22:39:22,697 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=67.5 pTM=0.409 ipTM=0.178 tol=1.7
2024-12-08 22:39:36,156 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.2 pTM=0.404 ipTM=0.172 tol=1.99
2024-12-08 22:39:49,631 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=67.2 pTM=0.404 ipTM=0.174 tol=1.53
2024-12-08 22:40:03,089 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.3 pTM=0.407 ipTM=0.173 tol=1.35
2024-12-08 22:40:16,562 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=67.1 pTM=0.403 ipTM=0.166 tol=1.3
2024-12-08 22:40:30,022 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67.2 pTM=0.405 ipTM=0.166 tol=2.23
2024-12-08 22:40:43,498 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=66.8 pTM=0.405 ipTM=0.166 tol=1.05
2024-12-08 22:40:56,974 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=66.8 pTM=0.401 ipTM=0.163 tol=1.34
2024-12-08 22:41:10,453 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=66.9 pTM=0.4 ipTM=0.167 tol=1.23
2024-12-08 22:41:23,934 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.2 pTM=0.402 ipTM=0.165 tol=2.11
2024-12-08 22:41:37,400 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.1 pTM=0.403 ipTM=0.167 tol=1.29
2024-12-08 22:41:37,401 alphafold2_multimer_v3_model_3_seed_000 took 417.7s (30 recycles)
2024-12-08 22:41:51,368 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=58.6 pTM=0.336 ipTM=0.154
2024-12-08 22:42:04,910 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=60.1 pTM=0.333 ipTM=0.12 tol=20.5
2024-12-08 22:42:18,440 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=60.8 pTM=0.34 ipTM=0.114 tol=17
2024-12-08 22:42:31,980 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=61.7 pTM=0.342 ipTM=0.199 tol=19.9
2024-12-08 22:42:45,516 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=60.8 pTM=0.343 ipTM=0.121 tol=10.5
2024-12-08 22:42:59,038 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=61.3 pTM=0.348 ipTM=0.131 tol=6.24
2024-12-08 22:43:12,550 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=62 pTM=0.349 ipTM=0.127 tol=4.32
2024-12-08 22:43:26,066 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=61.8 pTM=0.347 ipTM=0.144 tol=2.7
2024-12-08 22:43:39,580 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=61.6 pTM=0.345 ipTM=0.142 tol=2.75
2024-12-08 22:43:53,103 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=61.2 pTM=0.351 ipTM=0.133 tol=4.79
2024-12-08 22:44:06,608 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=61 pTM=0.347 ipTM=0.146 tol=5.22
2024-12-08 22:44:20,129 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=60.9 pTM=0.348 ipTM=0.133 tol=7.03
2024-12-08 22:44:33,630 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=61 pTM=0.353 ipTM=0.168 tol=4.96
2024-12-08 22:44:47,135 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=60.1 pTM=0.344 ipTM=0.133 tol=3.74
2024-12-08 22:45:00,656 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=60.4 pTM=0.35 ipTM=0.162 tol=6.11
2024-12-08 22:45:14,182 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=60.3 pTM=0.352 ipTM=0.134 tol=5.81
2024-12-08 22:45:27,693 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=60.5 pTM=0.354 ipTM=0.16 tol=6.67
2024-12-08 22:45:41,232 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=60.1 pTM=0.344 ipTM=0.128 tol=4.86
2024-12-08 22:45:54,741 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=60.8 pTM=0.349 ipTM=0.158 tol=4.39
2024-12-08 22:46:08,269 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=60.2 pTM=0.341 ipTM=0.129 tol=6.07
2024-12-08 22:46:21,795 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=60.4 pTM=0.34 ipTM=0.14 tol=5.54
2024-12-08 22:46:35,350 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=60.2 pTM=0.337 ipTM=0.124 tol=6.16
2024-12-08 22:46:48,884 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=60.1 pTM=0.343 ipTM=0.151 tol=4.91
2024-12-08 22:47:02,434 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=59.7 pTM=0.344 ipTM=0.127 tol=4.66
2024-12-08 22:47:15,958 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=60.2 pTM=0.344 ipTM=0.14 tol=4.34
2024-12-08 22:47:29,513 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60.2 pTM=0.337 ipTM=0.124 tol=7.48
2024-12-08 22:47:43,042 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=60 pTM=0.346 ipTM=0.141 tol=8.73
2024-12-08 22:47:56,596 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=60.7 pTM=0.341 ipTM=0.125 tol=3.95
2024-12-08 22:48:10,138 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=60.9 pTM=0.342 ipTM=0.164 tol=4.23
2024-12-08 22:48:23,684 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=60.2 pTM=0.346 ipTM=0.128 tol=11.4
2024-12-08 22:48:37,219 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=60.2 pTM=0.345 ipTM=0.13 tol=8.5
2024-12-08 22:48:37,220 alphafold2_multimer_v3_model_4_seed_000 took 419.4s (30 recycles)
2024-12-08 22:48:51,136 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=63 pTM=0.359 ipTM=0.143
2024-12-08 22:49:04,629 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=62.9 pTM=0.372 ipTM=0.181 tol=32.7
2024-12-08 22:49:18,122 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=64.8 pTM=0.37 ipTM=0.169 tol=16
2024-12-08 22:49:31,588 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=66.6 pTM=0.385 ipTM=0.269 tol=7.82
2024-12-08 22:49:45,029 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=68.5 pTM=0.419 ipTM=0.383 tol=4.85
2024-12-08 22:49:58,482 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=68.8 pTM=0.419 ipTM=0.391 tol=6.11
2024-12-08 22:50:11,936 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=68.9 pTM=0.421 ipTM=0.396 tol=2.86
2024-12-08 22:50:25,385 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=68.8 pTM=0.417 ipTM=0.389 tol=2.63
2024-12-08 22:50:38,839 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=68.5 pTM=0.413 ipTM=0.383 tol=2.09
2024-12-08 22:50:52,293 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67.9 pTM=0.409 ipTM=0.376 tol=4.22
2024-12-08 22:51:05,757 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=67.4 pTM=0.405 ipTM=0.366 tol=3.15
2024-12-08 22:51:19,221 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67.2 pTM=0.404 ipTM=0.359 tol=2.66
2024-12-08 22:51:32,687 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=66.9 pTM=0.402 ipTM=0.366 tol=2.03
2024-12-08 22:51:46,146 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=66.6 pTM=0.398 ipTM=0.355 tol=3.21
2024-12-08 22:51:59,625 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=66.8 pTM=0.402 ipTM=0.365 tol=2.24
2024-12-08 22:52:13,085 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=66.7 pTM=0.401 ipTM=0.359 tol=2.98
2024-12-08 22:52:26,549 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=66.4 pTM=0.399 ipTM=0.358 tol=2.98
2024-12-08 22:52:40,019 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=66 pTM=0.396 ipTM=0.353 tol=3.41
2024-12-08 22:52:53,486 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=66 pTM=0.394 ipTM=0.345 tol=4.91
2024-12-08 22:53:06,942 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=66 pTM=0.394 ipTM=0.344 tol=4.2
2024-12-08 22:53:20,398 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=66.2 pTM=0.396 ipTM=0.348 tol=3.56
2024-12-08 22:53:33,856 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=66.3 pTM=0.396 ipTM=0.347 tol=5.08
2024-12-08 22:53:47,329 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=66.4 pTM=0.399 ipTM=0.358 tol=2.86
2024-12-08 22:54:00,793 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=66.3 pTM=0.397 ipTM=0.355 tol=5.99
2024-12-08 22:54:14,253 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=66.3 pTM=0.394 ipTM=0.351 tol=3.23
2024-12-08 22:54:27,726 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=66.4 pTM=0.394 ipTM=0.346 tol=2.29
2024-12-08 22:54:41,185 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=66.6 pTM=0.399 ipTM=0.36 tol=3.33
2024-12-08 22:54:54,646 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=66.5 pTM=0.396 ipTM=0.353 tol=4.41
2024-12-08 22:55:08,100 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=67.2 pTM=0.401 ipTM=0.363 tol=4.58
2024-12-08 22:55:21,560 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=67.1 pTM=0.399 ipTM=0.355 tol=4.33
2024-12-08 22:55:35,035 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=67 pTM=0.399 ipTM=0.361 tol=2.46
2024-12-08 22:55:35,036 alphafold2_multimer_v3_model_5_seed_000 took 417.4s (30 recycles)
2024-12-08 22:55:35,491 reranking models by 'multimer' metric
2024-12-08 22:55:39,001 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 22:56:39,714 Relaxation took 64.2s
2024-12-08 22:56:39,714 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67 pTM=0.399 ipTM=0.361
2024-12-08 22:57:43,953 Relaxation took 64.2s
2024-12-08 22:57:43,953 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=69.1 pTM=0.396 ipTM=0.288
2024-12-08 22:58:37,310 Relaxation took 53.4s
2024-12-08 22:58:37,310 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=65.3 pTM=0.344 ipTM=0.188
2024-12-08 22:59:31,409 Relaxation took 54.1s
2024-12-08 22:59:31,409 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.1 pTM=0.403 ipTM=0.167
2024-12-08 23:00:51,435 Relaxation took 80.0s
2024-12-08 23:00:51,435 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=60.2 pTM=0.345 ipTM=0.13
2024-12-08 23:00:52,933 Done