2024-12-08 23:01:29,183 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 23:01:29,504 Running on GPU
2024-12-08 23:01:33,369 Found 6 citations for tools or databases
2024-12-08 23:01:33,369 Query 1/1: TRIM28_ZNF331 (length 1298)
2024-12-08 23:01:33,684 Sleeping for 6s. Reason: PENDING
2024-12-08 23:01:39,938 Sleeping for 5s. Reason: RUNNING
2024-12-08 23:01:45,195 Sleeping for 8s. Reason: RUNNING
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2024-12-08 23:02:18,474 Sleeping for 6s. Reason: RUNNING
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2024-12-08 23:04:31,846 Sleeping for 5s. Reason: RUNNING
2024-12-08 23:04:37,104 Sleeping for 7s. Reason: RUNNING
2024-12-08 23:04:44,366 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:04:53,630 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:05:02,883 Sleeping for 10s. Reason: RUNNING
2024-12-08 23:05:13,145 Sleeping for 6s. Reason: RUNNING
2024-12-08 23:05:19,402 Sleeping for 10s. Reason: RUNNING
2024-12-08 23:05:29,658 Sleeping for 10s. Reason: RUNNING
2024-12-08 23:05:39,921 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:05:58,788 Sleeping for 8s. Reason: PENDING
2024-12-08 23:06:07,047 Sleeping for 10s. Reason: RUNNING
2024-12-08 23:06:17,315 Sleeping for 6s. Reason: RUNNING
2024-12-08 23:06:23,569 Sleeping for 5s. Reason: RUNNING
2024-12-08 23:06:28,826 Sleeping for 6s. Reason: RUNNING
2024-12-08 23:06:35,076 Sleeping for 8s. Reason: RUNNING
2024-12-08 23:06:43,332 Sleeping for 7s. Reason: RUNNING
2024-12-08 23:06:50,592 Sleeping for 6s. Reason: RUNNING
2024-12-08 23:06:56,847 Sleeping for 7s. Reason: RUNNING
2024-12-08 23:07:04,101 Sleeping for 5s. Reason: RUNNING
2024-12-08 23:07:09,365 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:07:18,620 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:07:27,886 Sleeping for 8s. Reason: RUNNING
2024-12-08 23:07:36,146 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:07:45,402 Sleeping for 10s. Reason: RUNNING
2024-12-08 23:07:55,667 Sleeping for 10s. Reason: RUNNING
2024-12-08 23:08:05,920 Sleeping for 8s. Reason: RUNNING
2024-12-08 23:08:14,178 Sleeping for 7s. Reason: RUNNING
2024-12-08 23:08:28,960 Setting max_seq=508, max_extra_seq=2048
2024-12-08 23:11:39,779 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=52.2 pTM=0.278 ipTM=0.284
2024-12-08 23:12:23,103 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=52.5 pTM=0.289 ipTM=0.295 tol=24.7
2024-12-08 23:13:06,478 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=51.6 pTM=0.297 ipTM=0.308 tol=6.71
2024-12-08 23:13:49,925 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=51.2 pTM=0.306 ipTM=0.319 tol=3.55
2024-12-08 23:14:33,389 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=51.2 pTM=0.309 ipTM=0.32 tol=2.24
2024-12-08 23:15:16,899 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=51.6 pTM=0.3 ipTM=0.308 tol=2.56
2024-12-08 23:16:00,388 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=51.6 pTM=0.301 ipTM=0.307 tol=2.03
2024-12-08 23:16:43,884 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=51.7 pTM=0.299 ipTM=0.305 tol=1.93
2024-12-08 23:17:27,388 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=51.6 pTM=0.301 ipTM=0.307 tol=1.94
2024-12-08 23:18:10,914 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=51.9 pTM=0.302 ipTM=0.311 tol=2.03
2024-12-08 23:18:54,412 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=51.2 pTM=0.306 ipTM=0.316 tol=2.12
2024-12-08 23:19:37,900 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=51.6 pTM=0.312 ipTM=0.325 tol=1.68
2024-12-08 23:20:21,376 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=51.1 pTM=0.321 ipTM=0.339 tol=1.91
2024-12-08 23:21:04,871 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=51.5 pTM=0.323 ipTM=0.341 tol=2.49
2024-12-08 23:21:48,353 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=51.2 pTM=0.318 ipTM=0.333 tol=1.58
2024-12-08 23:22:31,878 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=51.8 pTM=0.314 ipTM=0.328 tol=2.2
2024-12-08 23:23:15,401 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=51.4 pTM=0.317 ipTM=0.331 tol=1.96
2024-12-08 23:23:58,915 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=51.4 pTM=0.321 ipTM=0.339 tol=1.94
2024-12-08 23:24:42,448 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=51.2 pTM=0.318 ipTM=0.335 tol=2.22
2024-12-08 23:25:25,967 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=51.5 pTM=0.313 ipTM=0.327 tol=1.75
2024-12-08 23:26:09,459 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=51.1 pTM=0.319 ipTM=0.335 tol=1.68
2024-12-08 23:26:52,974 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=51.5 pTM=0.32 ipTM=0.336 tol=1.93
2024-12-08 23:27:36,459 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=51.1 pTM=0.32 ipTM=0.337 tol=2.52
2024-12-08 23:28:19,989 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=51.5 pTM=0.315 ipTM=0.329 tol=2.19
2024-12-08 23:29:03,523 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=51.1 pTM=0.316 ipTM=0.331 tol=1.63
2024-12-08 23:29:47,039 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=51.3 pTM=0.314 ipTM=0.33 tol=2.19
2024-12-08 23:30:30,556 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=51 pTM=0.321 ipTM=0.337 tol=2.17
2024-12-08 23:31:14,076 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=51.3 pTM=0.315 ipTM=0.33 tol=1.62
2024-12-08 23:31:57,573 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=51.1 pTM=0.319 ipTM=0.335 tol=1.55
2024-12-08 23:32:41,018 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=51.3 pTM=0.321 ipTM=0.339 tol=1.79
2024-12-08 23:33:24,482 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=51.4 pTM=0.322 ipTM=0.34 tol=1.86
2024-12-08 23:33:24,485 alphafold2_multimer_v3_model_1_seed_000 took 1490.6s (30 recycles)
2024-12-08 23:34:09,085 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=49.7 pTM=0.279 ipTM=0.293
2024-12-08 23:34:52,660 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=50.5 pTM=0.308 ipTM=0.334 tol=24.6
2024-12-08 23:35:36,264 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=50.6 pTM=0.309 ipTM=0.338 tol=7.57
2024-12-08 23:36:19,877 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=51.2 pTM=0.31 ipTM=0.342 tol=10.5
2024-12-08 23:37:03,475 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=51.7 pTM=0.31 ipTM=0.337 tol=7.1
2024-12-08 23:37:47,102 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=51.6 pTM=0.308 ipTM=0.338 tol=3.46
2024-12-08 23:38:30,724 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=52.1 pTM=0.309 ipTM=0.338 tol=3.42
2024-12-08 23:39:14,348 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=52.2 pTM=0.307 ipTM=0.336 tol=3.88
2024-12-08 23:39:57,961 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=52.2 pTM=0.306 ipTM=0.335 tol=1.66
2024-12-08 23:40:41,577 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=52.2 pTM=0.308 ipTM=0.338 tol=2.8
2024-12-08 23:41:25,195 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=52.3 pTM=0.305 ipTM=0.333 tol=1.02
2024-12-08 23:42:08,805 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=52.6 pTM=0.307 ipTM=0.338 tol=1.07
2024-12-08 23:42:52,424 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=51.9 pTM=0.306 ipTM=0.335 tol=2.49
2024-12-08 23:43:36,034 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=52.1 pTM=0.307 ipTM=0.336 tol=1.04
2024-12-08 23:44:19,642 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=52.2 pTM=0.307 ipTM=0.336 tol=1.39
2024-12-08 23:45:03,272 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=52.4 pTM=0.306 ipTM=0.337 tol=1.02
2024-12-08 23:45:46,892 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=52.3 pTM=0.305 ipTM=0.334 tol=3.11
2024-12-08 23:46:30,476 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=52.1 pTM=0.307 ipTM=0.338 tol=1.16
2024-12-08 23:47:14,085 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=52.3 pTM=0.306 ipTM=0.336 tol=1.38
2024-12-08 23:47:57,705 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=52.5 pTM=0.303 ipTM=0.333 tol=3.22
2024-12-08 23:48:41,313 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=52.2 pTM=0.305 ipTM=0.335 tol=1.56
2024-12-08 23:49:24,902 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=52.2 pTM=0.306 ipTM=0.337 tol=1.17
2024-12-08 23:50:08,502 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=52.2 pTM=0.304 ipTM=0.333 tol=3
2024-12-08 23:50:52,132 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=52.3 pTM=0.306 ipTM=0.336 tol=2.95
2024-12-08 23:51:35,731 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=52.2 pTM=0.304 ipTM=0.334 tol=3.3
2024-12-08 23:52:19,334 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=52.3 pTM=0.304 ipTM=0.335 tol=1.18
2024-12-08 23:53:02,980 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=52.4 pTM=0.309 ipTM=0.342 tol=0.904
2024-12-08 23:53:46,600 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=52.2 pTM=0.308 ipTM=0.338 tol=3.07
2024-12-08 23:54:30,235 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=52.3 pTM=0.307 ipTM=0.338 tol=2.87
2024-12-08 23:55:13,885 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=52.2 pTM=0.307 ipTM=0.337 tol=3.7
2024-12-08 23:55:57,503 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=52.6 pTM=0.308 ipTM=0.338 tol=4.72
2024-12-08 23:55:57,505 alphafold2_multimer_v3_model_2_seed_000 took 1352.0s (30 recycles)
2024-12-08 23:56:42,308 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=50.5 pTM=0.292 ipTM=0.301
2024-12-08 23:57:26,102 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=51 pTM=0.31 ipTM=0.329 tol=27.5
2024-12-08 23:58:09,860 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=50.4 pTM=0.315 ipTM=0.337 tol=10.3
2024-12-08 23:58:53,605 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=50.2 pTM=0.315 ipTM=0.336 tol=7.97
2024-12-08 23:59:37,391 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=50.2 pTM=0.316 ipTM=0.338 tol=6.79
2024-12-09 00:00:21,152 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=50.3 pTM=0.315 ipTM=0.336 tol=2.98
2024-12-09 00:01:04,928 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=50.4 pTM=0.314 ipTM=0.336 tol=6.6
2024-12-09 00:01:48,679 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=50.3 pTM=0.312 ipTM=0.334 tol=5.95
2024-12-09 00:02:32,410 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=50.3 pTM=0.315 ipTM=0.336 tol=6.04
2024-12-09 00:03:16,121 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=50.1 pTM=0.315 ipTM=0.337 tol=5.59
2024-12-09 00:03:59,860 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=50.2 pTM=0.315 ipTM=0.336 tol=5.79
2024-12-09 00:04:43,618 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=50.3 pTM=0.315 ipTM=0.337 tol=5.92
2024-12-09 00:05:27,373 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=50.4 pTM=0.314 ipTM=0.336 tol=2.02
2024-12-09 00:06:11,116 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=50.2 pTM=0.313 ipTM=0.332 tol=5.24
2024-12-09 00:06:54,879 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=50.6 pTM=0.313 ipTM=0.334 tol=3.44
2024-12-09 00:07:38,633 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=50.6 pTM=0.315 ipTM=0.338 tol=6.26
2024-12-09 00:08:22,409 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=50.6 pTM=0.314 ipTM=0.336 tol=5.42
2024-12-09 00:09:06,172 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=50.4 pTM=0.313 ipTM=0.335 tol=3.65
2024-12-09 00:09:49,915 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=50.6 pTM=0.313 ipTM=0.335 tol=5.83
2024-12-09 00:10:33,681 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=50.2 pTM=0.312 ipTM=0.334 tol=2.37
2024-12-09 00:11:17,424 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=50.2 pTM=0.313 ipTM=0.335 tol=5.29
2024-12-09 00:12:01,189 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=50.4 pTM=0.314 ipTM=0.337 tol=2.72
2024-12-09 00:12:44,941 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=50.5 pTM=0.314 ipTM=0.336 tol=5.71
2024-12-09 00:13:28,662 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=50.4 pTM=0.314 ipTM=0.336 tol=2.96
2024-12-09 00:14:12,433 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=48.4 pTM=0.313 ipTM=0.336 tol=14.2
2024-12-09 00:14:56,162 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=49.5 pTM=0.305 ipTM=0.321 tol=9.53
2024-12-09 00:15:39,907 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=49.8 pTM=0.31 ipTM=0.329 tol=5.66
2024-12-09 00:16:23,638 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=49.8 pTM=0.31 ipTM=0.329 tol=3.71
2024-12-09 00:17:07,342 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=49.8 pTM=0.31 ipTM=0.331 tol=3.15
2024-12-09 00:17:51,061 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=50.2 pTM=0.311 ipTM=0.331 tol=4.4
2024-12-09 00:18:34,775 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=50.4 pTM=0.313 ipTM=0.332 tol=2.75
2024-12-09 00:18:34,776 alphafold2_multimer_v3_model_3_seed_000 took 1356.2s (30 recycles)
2024-12-09 00:19:19,679 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=49.7 pTM=0.26 ipTM=0.254
2024-12-09 00:20:03,498 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=52.5 pTM=0.288 ipTM=0.29 tol=30.5
2024-12-09 00:20:47,267 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=53.8 pTM=0.305 ipTM=0.316 tol=11
2024-12-09 00:21:31,047 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=53.9 pTM=0.31 ipTM=0.325 tol=6.13
2024-12-09 00:22:14,873 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=54.2 pTM=0.311 ipTM=0.324 tol=4.86
2024-12-09 00:22:58,704 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=54.4 pTM=0.31 ipTM=0.322 tol=7.04
2024-12-09 00:23:42,518 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=54.4 pTM=0.31 ipTM=0.322 tol=5.95
2024-12-09 00:24:26,344 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=54.2 pTM=0.308 ipTM=0.319 tol=3.91
2024-12-09 00:25:10,153 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=54.5 pTM=0.309 ipTM=0.321 tol=4.3
2024-12-09 00:25:53,966 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=54.2 pTM=0.311 ipTM=0.322 tol=4.34
2024-12-09 00:26:37,779 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=54.2 pTM=0.309 ipTM=0.319 tol=6.6
2024-12-09 00:27:21,563 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=54.4 pTM=0.309 ipTM=0.32 tol=4.43
2024-12-09 00:28:05,408 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=54.1 pTM=0.309 ipTM=0.321 tol=6.2
2024-12-09 00:28:49,203 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=54.4 pTM=0.31 ipTM=0.322 tol=3.92
2024-12-09 00:29:32,992 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=54.2 pTM=0.312 ipTM=0.325 tol=3.35
2024-12-09 00:30:16,771 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=54.4 pTM=0.312 ipTM=0.325 tol=3.92
2024-12-09 00:31:00,526 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=54.4 pTM=0.31 ipTM=0.324 tol=4.77
2024-12-09 00:31:44,331 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=54.7 pTM=0.311 ipTM=0.325 tol=4.38
2024-12-09 00:32:28,082 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=54.4 pTM=0.309 ipTM=0.32 tol=4.04
2024-12-09 00:33:11,824 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=54.3 pTM=0.31 ipTM=0.322 tol=3.95
2024-12-09 00:33:55,566 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=54.3 pTM=0.314 ipTM=0.328 tol=3.67
2024-12-09 00:34:39,308 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=54.6 pTM=0.314 ipTM=0.328 tol=2.72
2024-12-09 00:35:23,039 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=54.3 pTM=0.313 ipTM=0.326 tol=2.46
2024-12-09 00:36:06,809 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=54.7 pTM=0.312 ipTM=0.328 tol=3.83
2024-12-09 00:36:50,603 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=54.5 pTM=0.312 ipTM=0.327 tol=4.39
2024-12-09 00:37:34,366 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=54.5 pTM=0.316 ipTM=0.329 tol=3.5
2024-12-09 00:38:18,140 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=54.2 pTM=0.318 ipTM=0.335 tol=3.7
2024-12-09 00:39:01,863 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=54.4 pTM=0.319 ipTM=0.333 tol=8.16
2024-12-09 00:39:45,592 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=54.2 pTM=0.318 ipTM=0.334 tol=4.46
2024-12-09 00:40:29,314 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=54.7 pTM=0.32 ipTM=0.334 tol=4.8
2024-12-09 00:41:13,029 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=54.6 pTM=0.319 ipTM=0.331 tol=4.55
2024-12-09 00:41:13,030 alphafold2_multimer_v3_model_4_seed_000 took 1357.2s (30 recycles)
2024-12-09 00:41:57,784 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=49.3 pTM=0.26 ipTM=0.257
2024-12-09 00:42:41,488 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=50 pTM=0.286 ipTM=0.29 tol=24.5
2024-12-09 00:43:25,200 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=50.9 pTM=0.296 ipTM=0.303 tol=8.3
2024-12-09 00:44:08,916 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=51.2 pTM=0.3 ipTM=0.302 tol=8.72
2024-12-09 00:44:52,607 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=51.2 pTM=0.3 ipTM=0.303 tol=6.74
2024-12-09 00:45:36,324 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=51.3 pTM=0.302 ipTM=0.304 tol=4.95
2024-12-09 00:46:20,022 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=51.3 pTM=0.301 ipTM=0.303 tol=3.27
2024-12-09 00:47:03,731 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=51.2 pTM=0.3 ipTM=0.303 tol=3.54
2024-12-09 00:47:47,442 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=51.3 pTM=0.302 ipTM=0.304 tol=5.27
2024-12-09 00:48:31,133 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=51.1 pTM=0.301 ipTM=0.304 tol=4.45
2024-12-09 00:49:14,833 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=51.3 pTM=0.299 ipTM=0.302 tol=2.62
2024-12-09 00:49:58,540 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=51.3 pTM=0.3 ipTM=0.304 tol=2.99
2024-12-09 00:50:42,239 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=51.2 pTM=0.299 ipTM=0.302 tol=3.11
2024-12-09 00:51:25,973 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=51.3 pTM=0.299 ipTM=0.301 tol=2.02
2024-12-09 00:52:09,732 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=51.3 pTM=0.298 ipTM=0.3 tol=2.08
2024-12-09 00:52:53,470 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=51.2 pTM=0.3 ipTM=0.304 tol=3.83
2024-12-09 00:53:37,203 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=51.1 pTM=0.299 ipTM=0.304 tol=3.83
2024-12-09 00:54:20,940 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=51.2 pTM=0.301 ipTM=0.305 tol=4.44
2024-12-09 00:55:04,663 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=51.3 pTM=0.3 ipTM=0.305 tol=1.68
2024-12-09 00:55:48,358 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=51.3 pTM=0.298 ipTM=0.301 tol=1.71
2024-12-09 00:56:32,090 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=51.2 pTM=0.3 ipTM=0.303 tol=1.7
2024-12-09 00:57:15,788 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=51.3 pTM=0.3 ipTM=0.303 tol=5.51
2024-12-09 00:57:59,487 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=51.2 pTM=0.299 ipTM=0.301 tol=3.36
2024-12-09 00:58:43,184 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=51.2 pTM=0.299 ipTM=0.303 tol=1.91
2024-12-09 00:59:26,871 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=51.3 pTM=0.298 ipTM=0.302 tol=5.05
2024-12-09 01:00:10,563 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=51.4 pTM=0.301 ipTM=0.304 tol=2.37
2024-12-09 01:00:54,239 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=51.2 pTM=0.303 ipTM=0.309 tol=1.61
2024-12-09 01:01:37,917 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=51.1 pTM=0.302 ipTM=0.308 tol=4.32
2024-12-09 01:02:21,632 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=51.3 pTM=0.3 ipTM=0.305 tol=4.54
2024-12-09 01:03:05,371 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=51.4 pTM=0.302 ipTM=0.306 tol=1.69
2024-12-09 01:03:49,086 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=51.7 pTM=0.302 ipTM=0.306 tol=1.33
2024-12-09 01:03:49,088 alphafold2_multimer_v3_model_5_seed_000 took 1355.0s (30 recycles)
2024-12-09 01:03:50,108 reranking models by 'multimer' metric
2024-12-09 01:03:53,596 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 01:07:09,297 Relaxation took 199.2s
2024-12-09 01:07:09,297 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=51.4 pTM=0.322 ipTM=0.34
2024-12-09 01:09:39,982 Relaxation took 150.7s
2024-12-09 01:09:39,982 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=52.6 pTM=0.308 ipTM=0.338
2024-12-09 01:26:35,083 Relaxation took 1015.1s
2024-12-09 01:26:35,083 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=54.6 pTM=0.319 ipTM=0.331
2024-12-09 01:29:17,620 Relaxation took 162.5s
2024-12-09 01:29:17,620 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=50.4 pTM=0.313 ipTM=0.332
2024-12-09 01:32:30,304 Relaxation took 192.7s
2024-12-09 01:32:30,305 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=51.7 pTM=0.302 ipTM=0.306
2024-12-09 01:32:32,883 Done