2024-12-08 23:21:54,379 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 23:21:54,677 Running on GPU
2024-12-08 23:21:58,925 Found 6 citations for tools or databases
2024-12-08 23:21:58,925 Query 1/1: TRIM28_ZNF350 (length 1367)
2024-12-08 23:22:01,970 Sleeping for 10s. Reason: PENDING
2024-12-08 23:22:12,236 Sleeping for 5s. Reason: RUNNING
2024-12-08 23:22:17,498 Sleeping for 8s. Reason: RUNNING
2024-12-08 23:22:25,756 Sleeping for 6s. Reason: RUNNING
2024-12-08 23:22:32,016 Sleeping for 8s. Reason: RUNNING
2024-12-08 23:22:40,270 Sleeping for 10s. Reason: RUNNING
2024-12-08 23:22:50,528 Sleeping for 8s. Reason: RUNNING
2024-12-08 23:22:58,782 Sleeping for 10s. Reason: RUNNING
2024-12-08 23:23:09,045 Sleeping for 8s. Reason: RUNNING
2024-12-08 23:23:17,325 Sleeping for 6s. Reason: RUNNING
2024-12-08 23:23:23,577 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:23:32,835 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:23:42,102 Sleeping for 5s. Reason: RUNNING
2024-12-08 23:23:47,364 Sleeping for 5s. Reason: RUNNING
2024-12-08 23:23:52,618 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:24:01,876 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:24:11,140 Sleeping for 7s. Reason: RUNNING
2024-12-08 23:24:18,397 Sleeping for 6s. Reason: RUNNING
2024-12-08 23:24:24,652 Sleeping for 6s. Reason: RUNNING
2024-12-08 23:24:36,323 Setting max_seq=508, max_extra_seq=2048
2024-12-08 23:28:07,173 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=46.1 pTM=0.279 ipTM=0.289
2024-12-08 23:28:57,716 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=46.4 pTM=0.276 ipTM=0.284 tol=11.6
2024-12-08 23:29:48,331 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=46.7 pTM=0.297 ipTM=0.31 tol=23.8
2024-12-08 23:30:38,950 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=46.8 pTM=0.3 ipTM=0.313 tol=5.6
2024-12-08 23:31:29,609 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=47 pTM=0.301 ipTM=0.314 tol=3.89
2024-12-08 23:32:20,292 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=46.9 pTM=0.299 ipTM=0.31 tol=2.7
2024-12-08 23:33:10,988 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=46.8 pTM=0.301 ipTM=0.312 tol=2.97
2024-12-08 23:34:01,702 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=47 pTM=0.302 ipTM=0.315 tol=3.06
2024-12-08 23:34:52,431 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=46.9 pTM=0.301 ipTM=0.314 tol=2.04
2024-12-08 23:35:43,091 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=47 pTM=0.302 ipTM=0.314 tol=2.29
2024-12-08 23:36:33,795 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=46.8 pTM=0.3 ipTM=0.311 tol=2.3
2024-12-08 23:37:24,509 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=46.7 pTM=0.301 ipTM=0.314 tol=1.68
2024-12-08 23:38:15,212 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=46.8 pTM=0.298 ipTM=0.309 tol=1.95
2024-12-08 23:39:05,919 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=47.1 pTM=0.301 ipTM=0.313 tol=2.15
2024-12-08 23:39:56,618 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=46.8 pTM=0.301 ipTM=0.314 tol=3.18
2024-12-08 23:40:47,337 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=47.1 pTM=0.301 ipTM=0.314 tol=3.1
2024-12-08 23:41:38,075 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=47 pTM=0.299 ipTM=0.313 tol=2.12
2024-12-08 23:42:28,816 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=46.9 pTM=0.301 ipTM=0.313 tol=2.14
2024-12-08 23:43:19,516 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=46.9 pTM=0.299 ipTM=0.312 tol=2.37
2024-12-08 23:44:10,184 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=46.5 pTM=0.3 ipTM=0.313 tol=2.34
2024-12-08 23:45:00,864 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=46.7 pTM=0.302 ipTM=0.315 tol=1.7
2024-12-08 23:45:51,573 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=46.9 pTM=0.301 ipTM=0.315 tol=1.73
2024-12-08 23:46:42,272 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=46.7 pTM=0.3 ipTM=0.313 tol=2.48
2024-12-08 23:47:32,983 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=47.1 pTM=0.3 ipTM=0.314 tol=2.62
2024-12-08 23:48:23,711 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=46.9 pTM=0.3 ipTM=0.314 tol=1.46
2024-12-08 23:49:14,396 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=47 pTM=0.301 ipTM=0.314 tol=1.78
2024-12-08 23:50:05,043 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=47 pTM=0.301 ipTM=0.315 tol=1.53
2024-12-08 23:50:55,713 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=47.1 pTM=0.302 ipTM=0.316 tol=1.94
2024-12-08 23:51:46,388 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=46.8 pTM=0.301 ipTM=0.312 tol=2.05
2024-12-08 23:52:37,092 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=47 pTM=0.301 ipTM=0.314 tol=1.91
2024-12-08 23:53:27,784 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=47.1 pTM=0.3 ipTM=0.313 tol=1.82
2024-12-08 23:53:27,786 alphafold2_multimer_v3_model_1_seed_000 took 1725.9s (30 recycles)
2024-12-08 23:54:19,602 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=45.7 pTM=0.284 ipTM=0.3
2024-12-08 23:55:10,245 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=47.3 pTM=0.306 ipTM=0.332 tol=29.6
2024-12-08 23:56:00,912 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=47.7 pTM=0.308 ipTM=0.333 tol=11.1
2024-12-08 23:56:51,615 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=48.2 pTM=0.307 ipTM=0.335 tol=6.44
2024-12-08 23:57:42,308 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=48.2 pTM=0.308 ipTM=0.334 tol=5.73
2024-12-08 23:58:33,022 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=48.2 pTM=0.308 ipTM=0.334 tol=3.41
2024-12-08 23:59:23,739 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=48.4 pTM=0.312 ipTM=0.339 tol=3.76
2024-12-09 00:00:14,500 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=48.4 pTM=0.313 ipTM=0.341 tol=2.71
2024-12-09 00:01:05,267 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=48.2 pTM=0.311 ipTM=0.337 tol=2.52
2024-12-09 00:01:56,029 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=48.2 pTM=0.311 ipTM=0.338 tol=2.15
2024-12-09 00:02:46,796 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=48.2 pTM=0.309 ipTM=0.337 tol=2.33
2024-12-09 00:03:37,582 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=48.2 pTM=0.312 ipTM=0.34 tol=1.9
2024-12-09 00:04:28,352 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=48.2 pTM=0.307 ipTM=0.332 tol=2.31
2024-12-09 00:05:19,112 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=48.2 pTM=0.311 ipTM=0.336 tol=1.88
2024-12-09 00:06:09,887 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=48.1 pTM=0.311 ipTM=0.338 tol=2.11
2024-12-09 00:07:00,650 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=48.2 pTM=0.31 ipTM=0.335 tol=2.3
2024-12-09 00:07:51,385 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=48.3 pTM=0.308 ipTM=0.335 tol=1.85
2024-12-09 00:08:42,147 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=48.3 pTM=0.309 ipTM=0.335 tol=1.65
2024-12-09 00:09:32,903 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=48.2 pTM=0.307 ipTM=0.333 tol=2.37
2024-12-09 00:10:23,669 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=48 pTM=0.311 ipTM=0.338 tol=1.68
2024-12-09 00:11:14,431 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=48.2 pTM=0.311 ipTM=0.338 tol=1.51
2024-12-09 00:12:05,179 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=48.1 pTM=0.309 ipTM=0.334 tol=1.69
2024-12-09 00:12:55,896 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=48 pTM=0.31 ipTM=0.335 tol=1.52
2024-12-09 00:13:46,629 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=48.1 pTM=0.309 ipTM=0.336 tol=1.63
2024-12-09 00:14:37,377 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=47.9 pTM=0.31 ipTM=0.337 tol=1.72
2024-12-09 00:15:28,138 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=48.2 pTM=0.31 ipTM=0.337 tol=2.21
2024-12-09 00:16:18,891 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=48.1 pTM=0.309 ipTM=0.335 tol=3.72
2024-12-09 00:17:09,669 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=48.1 pTM=0.311 ipTM=0.337 tol=2.64
2024-12-09 00:18:00,438 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=48.1 pTM=0.311 ipTM=0.336 tol=6
2024-12-09 00:18:51,183 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=48.2 pTM=0.311 ipTM=0.337 tol=2.9
2024-12-09 00:19:41,959 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=48.2 pTM=0.308 ipTM=0.335 tol=2.56
2024-12-09 00:19:41,961 alphafold2_multimer_v3_model_2_seed_000 took 1573.1s (30 recycles)
2024-12-09 00:20:33,975 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=44.6 pTM=0.295 ipTM=0.306
2024-12-09 00:21:24,791 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=46.4 pTM=0.31 ipTM=0.325 tol=29.3
2024-12-09 00:22:15,666 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=46.3 pTM=0.316 ipTM=0.34 tol=11.4
2024-12-09 00:23:06,536 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=46.8 pTM=0.316 ipTM=0.34 tol=8.69
2024-12-09 00:23:57,399 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=46.5 pTM=0.314 ipTM=0.338 tol=8.05
2024-12-09 00:24:48,250 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=46.5 pTM=0.315 ipTM=0.34 tol=6.61
2024-12-09 00:25:39,120 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=46.8 pTM=0.318 ipTM=0.343 tol=5.16
2024-12-09 00:26:29,987 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=46.9 pTM=0.318 ipTM=0.344 tol=4.11
2024-12-09 00:27:20,854 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=46.7 pTM=0.316 ipTM=0.342 tol=3.44
2024-12-09 00:28:11,750 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=46.7 pTM=0.317 ipTM=0.343 tol=2.91
2024-12-09 00:29:02,581 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=46.7 pTM=0.317 ipTM=0.343 tol=5.9
2024-12-09 00:29:53,398 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=46.8 pTM=0.317 ipTM=0.344 tol=6.11
2024-12-09 00:30:44,185 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=46.8 pTM=0.316 ipTM=0.341 tol=2.99
2024-12-09 00:31:35,000 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=46.9 pTM=0.317 ipTM=0.342 tol=2.54
2024-12-09 00:32:25,849 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=46.8 pTM=0.317 ipTM=0.344 tol=2.74
2024-12-09 00:33:16,694 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=46.9 pTM=0.315 ipTM=0.342 tol=2.24
2024-12-09 00:34:07,536 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=47 pTM=0.317 ipTM=0.345 tol=2.45
2024-12-09 00:34:58,394 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=46.8 pTM=0.317 ipTM=0.344 tol=2.41
2024-12-09 00:35:49,226 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=46.8 pTM=0.317 ipTM=0.344 tol=2.65
2024-12-09 00:36:40,090 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=46.6 pTM=0.317 ipTM=0.344 tol=2.73
2024-12-09 00:37:30,945 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=46.6 pTM=0.317 ipTM=0.343 tol=1.84
2024-12-09 00:38:21,789 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=46.6 pTM=0.316 ipTM=0.343 tol=2.8
2024-12-09 00:39:12,629 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=46.7 pTM=0.317 ipTM=0.345 tol=2.64
2024-12-09 00:40:03,459 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=46.8 pTM=0.318 ipTM=0.346 tol=1.95
2024-12-09 00:40:54,263 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=46.7 pTM=0.317 ipTM=0.344 tol=3.22
2024-12-09 00:41:45,028 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=46.6 pTM=0.318 ipTM=0.345 tol=1.91
2024-12-09 00:42:35,778 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=46.6 pTM=0.317 ipTM=0.345 tol=2.26
2024-12-09 00:43:26,554 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=46.8 pTM=0.318 ipTM=0.345 tol=3.33
2024-12-09 00:44:17,329 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=46.4 pTM=0.317 ipTM=0.344 tol=3.6
2024-12-09 00:45:08,136 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=46.6 pTM=0.317 ipTM=0.345 tol=2.49
2024-12-09 00:45:58,974 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=46.6 pTM=0.317 ipTM=0.344 tol=2.28
2024-12-09 00:45:58,975 alphafold2_multimer_v3_model_3_seed_000 took 1575.9s (30 recycles)
2024-12-09 00:46:51,048 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=44.5 pTM=0.276 ipTM=0.259
2024-12-09 00:47:41,960 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=46.8 pTM=0.286 ipTM=0.293 tol=32.4
2024-12-09 00:48:32,870 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=48.5 pTM=0.298 ipTM=0.317 tol=14.8
2024-12-09 00:49:23,727 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=47.9 pTM=0.304 ipTM=0.324 tol=14.8
2024-12-09 00:50:14,580 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=49.2 pTM=0.307 ipTM=0.326 tol=9.91
2024-12-09 00:51:05,441 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=48.9 pTM=0.31 ipTM=0.33 tol=7.85
2024-12-09 00:51:56,270 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=49.1 pTM=0.312 ipTM=0.332 tol=8.88
2024-12-09 00:52:47,151 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=49.1 pTM=0.31 ipTM=0.33 tol=6.86
2024-12-09 00:53:38,018 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=48.9 pTM=0.31 ipTM=0.33 tol=5.16
2024-12-09 00:54:28,864 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=48.9 pTM=0.311 ipTM=0.33 tol=3.71
2024-12-09 00:55:19,722 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=48.8 pTM=0.308 ipTM=0.327 tol=6.71
2024-12-09 00:56:10,603 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=48.9 pTM=0.311 ipTM=0.331 tol=3.63
2024-12-09 00:57:01,498 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=48.8 pTM=0.308 ipTM=0.326 tol=5.02
2024-12-09 00:57:52,367 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=48.8 pTM=0.31 ipTM=0.329 tol=6.49
2024-12-09 00:58:43,214 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=48.9 pTM=0.309 ipTM=0.329 tol=5.36
2024-12-09 00:59:34,070 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=48.8 pTM=0.309 ipTM=0.327 tol=6.17
2024-12-09 01:00:24,953 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=48.8 pTM=0.309 ipTM=0.328 tol=7.17
2024-12-09 01:01:15,823 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=48.7 pTM=0.307 ipTM=0.327 tol=6.24
2024-12-09 01:02:06,657 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=48.7 pTM=0.308 ipTM=0.328 tol=3.82
2024-12-09 01:02:57,482 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=48.6 pTM=0.31 ipTM=0.331 tol=2.96
2024-12-09 01:03:48,305 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=48.7 pTM=0.31 ipTM=0.33 tol=5.29
2024-12-09 01:04:39,181 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=48.6 pTM=0.309 ipTM=0.328 tol=5.38
2024-12-09 01:05:30,056 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=48.4 pTM=0.311 ipTM=0.332 tol=3.62
2024-12-09 01:06:20,944 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=48.6 pTM=0.312 ipTM=0.334 tol=3
2024-12-09 01:07:11,849 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=48.5 pTM=0.312 ipTM=0.332 tol=2.86
2024-12-09 01:08:02,758 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=48.6 pTM=0.311 ipTM=0.333 tol=3
2024-12-09 01:08:53,690 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=48.5 pTM=0.313 ipTM=0.334 tol=2.9
2024-12-09 01:09:44,588 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=48.7 pTM=0.312 ipTM=0.333 tol=2.58
2024-12-09 01:10:35,464 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=48.7 pTM=0.31 ipTM=0.331 tol=2.8
2024-12-09 01:11:26,299 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=48.8 pTM=0.311 ipTM=0.333 tol=2.75
2024-12-09 01:12:17,120 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=48.6 pTM=0.31 ipTM=0.331 tol=2.77
2024-12-09 01:12:17,121 alphafold2_multimer_v3_model_4_seed_000 took 1577.0s (30 recycles)
2024-12-09 01:13:09,103 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=44.1 pTM=0.277 ipTM=0.281
2024-12-09 01:13:59,972 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=45.9 pTM=0.283 ipTM=0.289 tol=26.5
2024-12-09 01:14:50,820 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=46.3 pTM=0.303 ipTM=0.313 tol=11.9
2024-12-09 01:15:41,654 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=46.7 pTM=0.306 ipTM=0.318 tol=7.93
2024-12-09 01:16:32,462 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=46.8 pTM=0.308 ipTM=0.32 tol=7.98
2024-12-09 01:17:23,273 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=47 pTM=0.31 ipTM=0.323 tol=7.59
2024-12-09 01:18:14,111 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=47.4 pTM=0.31 ipTM=0.322 tol=6.49
2024-12-09 01:19:04,952 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=47.1 pTM=0.31 ipTM=0.324 tol=8.55
2024-12-09 01:19:55,822 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=46.9 pTM=0.307 ipTM=0.32 tol=3.62
2024-12-09 01:20:46,691 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=47.3 pTM=0.309 ipTM=0.323 tol=2.9
2024-12-09 01:21:37,584 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=47.2 pTM=0.308 ipTM=0.322 tol=6.32
2024-12-09 01:22:28,469 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=47.3 pTM=0.309 ipTM=0.324 tol=5.03
2024-12-09 01:23:19,370 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=46.9 pTM=0.306 ipTM=0.319 tol=6.36
2024-12-09 01:24:10,272 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=47.3 pTM=0.308 ipTM=0.322 tol=3.2
2024-12-09 01:25:01,223 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=47.3 pTM=0.309 ipTM=0.324 tol=6.14
2024-12-09 01:25:52,186 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=47.4 pTM=0.306 ipTM=0.32 tol=4.45
2024-12-09 01:26:43,111 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=47.3 pTM=0.307 ipTM=0.321 tol=7.17
2024-12-09 01:27:34,065 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=47.4 pTM=0.308 ipTM=0.323 tol=6.2
2024-12-09 01:28:25,037 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=47.5 pTM=0.308 ipTM=0.322 tol=5.67
2024-12-09 01:29:15,973 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=47.1 pTM=0.309 ipTM=0.324 tol=6.41
2024-12-09 01:30:06,860 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=47.3 pTM=0.308 ipTM=0.322 tol=3.69
2024-12-09 01:30:57,844 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=47.3 pTM=0.307 ipTM=0.323 tol=2.88
2024-12-09 01:31:48,796 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=47.2 pTM=0.307 ipTM=0.322 tol=6.49
2024-12-09 01:32:39,779 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=47.1 pTM=0.31 ipTM=0.324 tol=3.12
2024-12-09 01:33:30,765 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=47.3 pTM=0.31 ipTM=0.324 tol=5.73
2024-12-09 01:34:21,748 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=47.3 pTM=0.309 ipTM=0.324 tol=5.26
2024-12-09 01:35:12,704 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=47.2 pTM=0.308 ipTM=0.323 tol=2.8
2024-12-09 01:36:03,632 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=47.6 pTM=0.309 ipTM=0.324 tol=3.16
2024-12-09 01:36:54,556 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=47.2 pTM=0.307 ipTM=0.322 tol=4.45
2024-12-09 01:37:45,496 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=47.3 pTM=0.309 ipTM=0.325 tol=5.35
2024-12-09 01:38:36,415 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=47.4 pTM=0.308 ipTM=0.323 tol=5.39
2024-12-09 01:38:36,416 alphafold2_multimer_v3_model_5_seed_000 took 1578.2s (30 recycles)
2024-12-09 01:38:37,545 reranking models by 'multimer' metric
2024-12-09 01:38:41,666 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 01:42:03,633 Relaxation took 206.1s
2024-12-09 01:42:03,633 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=46.6 pTM=0.317 ipTM=0.344
2024-12-09 01:44:35,088 Relaxation took 151.5s
2024-12-09 01:44:35,089 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=48.2 pTM=0.308 ipTM=0.335
2024-12-09 01:46:52,313 Relaxation took 137.2s
2024-12-09 01:46:52,314 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=48.6 pTM=0.31 ipTM=0.331
2024-12-09 01:50:20,613 Relaxation took 208.3s
2024-12-09 01:50:20,613 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=47.4 pTM=0.308 ipTM=0.323
2024-12-09 01:52:55,228 Relaxation took 154.6s
2024-12-09 01:52:55,228 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=47.1 pTM=0.3 ipTM=0.313
2024-12-09 01:52:58,077 Done