2024-12-08 23:24:05,504 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 23:24:05,889 Running on GPU
2024-12-08 23:24:10,659 Found 6 citations for tools or databases
2024-12-08 23:24:10,659 Query 1/1: TRIM28_ZNF418 (length 1511)
2024-12-08 23:24:10,957 Sleeping for 6s. Reason: PENDING
2024-12-08 23:24:17,229 Sleeping for 10s. Reason: RUNNING
2024-12-08 23:24:27,489 Sleeping for 10s. Reason: RUNNING
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2024-12-08 23:24:48,003 Sleeping for 6s. Reason: RUNNING
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2024-12-08 23:25:04,530 Sleeping for 10s. Reason: RUNNING
2024-12-08 23:25:14,788 Sleeping for 9s. Reason: RUNNING
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2024-12-08 23:25:32,313 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:25:41,579 Sleeping for 8s. Reason: RUNNING
2024-12-08 23:25:49,840 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:25:59,098 Sleeping for 8s. Reason: RUNNING
2024-12-08 23:26:07,358 Sleeping for 7s. Reason: RUNNING
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2024-12-08 23:26:21,878 Sleeping for 7s. Reason: RUNNING
2024-12-08 23:26:29,135 Sleeping for 9s. Reason: RUNNING
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2024-12-08 23:26:47,652 Sleeping for 8s. Reason: RUNNING
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2024-12-08 23:27:03,168 Sleeping for 5s. Reason: RUNNING
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2024-12-08 23:27:22,090 Sleeping for 7s. Reason: RUNNING
2024-12-08 23:27:29,349 Sleeping for 7s. Reason: RUNNING
2024-12-08 23:27:36,609 Sleeping for 6s. Reason: RUNNING
2024-12-08 23:27:42,868 Sleeping for 6s. Reason: RUNNING
2024-12-08 23:27:49,124 Sleeping for 7s. Reason: RUNNING
2024-12-08 23:27:56,387 Sleeping for 5s. Reason: RUNNING
2024-12-08 23:28:01,640 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:28:10,907 Sleeping for 10s. Reason: RUNNING
2024-12-08 23:28:21,168 Sleeping for 5s. Reason: RUNNING
2024-12-08 23:28:26,426 Sleeping for 5s. Reason: RUNNING
2024-12-08 23:28:31,682 Sleeping for 7s. Reason: RUNNING
2024-12-08 23:28:38,943 Sleeping for 6s. Reason: RUNNING
2024-12-08 23:28:45,199 Sleeping for 6s. Reason: RUNNING
2024-12-08 23:28:51,455 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:29:00,713 Sleeping for 8s. Reason: RUNNING
2024-12-08 23:29:08,973 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:29:18,228 Sleeping for 6s. Reason: RUNNING
2024-12-08 23:29:24,497 Sleeping for 6s. Reason: RUNNING
2024-12-08 23:29:30,754 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:29:40,028 Sleeping for 5s. Reason: RUNNING
2024-12-08 23:29:45,288 Sleeping for 7s. Reason: RUNNING
2024-12-08 23:29:55,257 Sleeping for 9s. Reason: PENDING
2024-12-08 23:30:04,520 Sleeping for 10s. Reason: RUNNING
2024-12-08 23:30:14,785 Sleeping for 10s. Reason: RUNNING
2024-12-08 23:30:25,047 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:30:34,308 Sleeping for 6s. Reason: RUNNING
2024-12-08 23:30:40,564 Sleeping for 10s. Reason: RUNNING
2024-12-08 23:30:50,825 Sleeping for 6s. Reason: RUNNING
2024-12-08 23:30:57,084 Sleeping for 5s. Reason: RUNNING
2024-12-08 23:31:02,343 Sleeping for 10s. Reason: RUNNING
2024-12-08 23:31:12,607 Sleeping for 10s. Reason: RUNNING
2024-12-08 23:31:22,863 Sleeping for 7s. Reason: RUNNING
2024-12-08 23:31:30,130 Sleeping for 8s. Reason: RUNNING
2024-12-08 23:31:38,391 Sleeping for 8s. Reason: RUNNING
2024-12-08 23:31:46,659 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:31:55,919 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:32:05,180 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:32:14,450 Sleeping for 5s. Reason: RUNNING
2024-12-08 23:32:19,712 Sleeping for 7s. Reason: RUNNING
2024-12-08 23:32:26,968 Sleeping for 10s. Reason: RUNNING
2024-12-08 23:32:44,258 Setting max_seq=508, max_extra_seq=2048
2024-12-08 23:37:12,602 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=48.5 pTM=0.275 ipTM=0.302
2024-12-08 23:38:16,296 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=47.3 pTM=0.267 ipTM=0.292 tol=12.7
2024-12-08 23:39:20,119 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=47.7 pTM=0.284 ipTM=0.312 tol=24.3
2024-12-08 23:40:23,920 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=47.9 pTM=0.284 ipTM=0.314 tol=10.7
2024-12-08 23:41:27,784 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=47.6 pTM=0.286 ipTM=0.317 tol=8.9
2024-12-08 23:42:31,733 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=47.6 pTM=0.288 ipTM=0.318 tol=6.39
2024-12-08 23:43:35,635 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=47.5 pTM=0.284 ipTM=0.313 tol=5.29
2024-12-08 23:44:39,558 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=48 pTM=0.285 ipTM=0.314 tol=3.71
2024-12-08 23:45:43,433 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=47.8 pTM=0.284 ipTM=0.314 tol=2.88
2024-12-08 23:46:47,296 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=47.7 pTM=0.286 ipTM=0.316 tol=2.6
2024-12-08 23:47:51,147 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=47.4 pTM=0.285 ipTM=0.315 tol=4.09
2024-12-08 23:48:55,035 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=47.7 pTM=0.287 ipTM=0.316 tol=4.61
2024-12-08 23:49:59,009 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=47.7 pTM=0.287 ipTM=0.318 tol=8.82
2024-12-08 23:51:02,955 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=48 pTM=0.287 ipTM=0.316 tol=3.56
2024-12-08 23:52:06,799 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=47.7 pTM=0.286 ipTM=0.315 tol=6.85
2024-12-08 23:53:10,648 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=47.7 pTM=0.286 ipTM=0.315 tol=3.83
2024-12-08 23:54:14,461 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=47.5 pTM=0.286 ipTM=0.316 tol=3.43
2024-12-08 23:55:18,264 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=47.7 pTM=0.288 ipTM=0.319 tol=2.8
2024-12-08 23:56:22,080 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=47.8 pTM=0.286 ipTM=0.317 tol=5.41
2024-12-08 23:57:25,902 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=47.3 pTM=0.285 ipTM=0.315 tol=2.96
2024-12-08 23:58:29,723 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=47.6 pTM=0.287 ipTM=0.318 tol=5.79
2024-12-08 23:59:33,542 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=47.8 pTM=0.288 ipTM=0.319 tol=3.52
2024-12-09 00:00:37,367 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=47.8 pTM=0.286 ipTM=0.317 tol=3.37
2024-12-09 00:01:41,175 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=47.5 pTM=0.288 ipTM=0.32 tol=3.26
2024-12-09 00:02:44,958 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=47.7 pTM=0.286 ipTM=0.316 tol=2.45
2024-12-09 00:03:48,760 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=47.5 pTM=0.284 ipTM=0.313 tol=3.71
2024-12-09 00:04:52,570 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=47.7 pTM=0.285 ipTM=0.314 tol=3.16
2024-12-09 00:05:56,396 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=47.3 pTM=0.287 ipTM=0.317 tol=3.44
2024-12-09 00:07:00,228 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=47.4 pTM=0.289 ipTM=0.319 tol=7.52
2024-12-09 00:08:04,053 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=47.5 pTM=0.287 ipTM=0.318 tol=5.01
2024-12-09 00:09:07,857 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=47.8 pTM=0.285 ipTM=0.314 tol=3.8
2024-12-09 00:09:07,858 alphafold2_multimer_v3_model_1_seed_000 took 2176.6s (30 recycles)
2024-12-09 00:10:13,487 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=46.1 pTM=0.277 ipTM=0.308
2024-12-09 00:11:17,358 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=46.8 pTM=0.296 ipTM=0.342 tol=23.9
2024-12-09 00:12:21,282 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=47 pTM=0.295 ipTM=0.341 tol=8.95
2024-12-09 00:13:25,208 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=47.4 pTM=0.293 ipTM=0.338 tol=7.21
2024-12-09 00:14:29,138 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=47.3 pTM=0.295 ipTM=0.338 tol=4.48
2024-12-09 00:15:33,116 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=47.6 pTM=0.296 ipTM=0.341 tol=2.71
2024-12-09 00:16:37,062 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=47.8 pTM=0.293 ipTM=0.336 tol=1.98
2024-12-09 00:17:40,979 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=48.2 pTM=0.296 ipTM=0.341 tol=2.12
2024-12-09 00:18:44,866 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=47.9 pTM=0.294 ipTM=0.339 tol=1.54
2024-12-09 00:19:48,763 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=48.3 pTM=0.294 ipTM=0.339 tol=1.4
2024-12-09 00:20:52,674 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=48 pTM=0.293 ipTM=0.337 tol=1.32
2024-12-09 00:21:56,596 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=48.2 pTM=0.295 ipTM=0.34 tol=1.25
2024-12-09 00:23:00,547 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=48.3 pTM=0.296 ipTM=0.341 tol=1.56
2024-12-09 00:24:04,535 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=48.5 pTM=0.295 ipTM=0.341 tol=2
2024-12-09 00:25:08,493 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=48.2 pTM=0.293 ipTM=0.339 tol=1.2
2024-12-09 00:26:12,428 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=48.3 pTM=0.292 ipTM=0.336 tol=1.74
2024-12-09 00:27:16,342 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=48.3 pTM=0.292 ipTM=0.336 tol=1.58
2024-12-09 00:28:20,303 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=48.3 pTM=0.292 ipTM=0.337 tol=2.13
2024-12-09 00:29:24,254 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=48.2 pTM=0.292 ipTM=0.337 tol=1.53
2024-12-09 00:30:28,216 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=47.8 pTM=0.292 ipTM=0.337 tol=1.79
2024-12-09 00:31:32,238 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=48.1 pTM=0.292 ipTM=0.339 tol=1.65
2024-12-09 00:32:36,263 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=48.3 pTM=0.291 ipTM=0.335 tol=1.54
2024-12-09 00:33:40,376 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=48.1 pTM=0.29 ipTM=0.333 tol=1.46
2024-12-09 00:34:44,357 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=48.1 pTM=0.293 ipTM=0.34 tol=1.38
2024-12-09 00:35:48,324 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=48.2 pTM=0.292 ipTM=0.338 tol=1.51
2024-12-09 00:36:52,276 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=48.2 pTM=0.289 ipTM=0.333 tol=1.7
2024-12-09 00:37:56,222 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=48.3 pTM=0.292 ipTM=0.337 tol=1.36
2024-12-09 00:39:00,196 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=48.1 pTM=0.293 ipTM=0.339 tol=1.19
2024-12-09 00:40:04,121 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=48.1 pTM=0.292 ipTM=0.337 tol=1.57
2024-12-09 00:41:08,068 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=48.1 pTM=0.292 ipTM=0.338 tol=1.65
2024-12-09 00:42:12,047 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=48.3 pTM=0.291 ipTM=0.336 tol=2.14
2024-12-09 00:42:12,048 alphafold2_multimer_v3_model_2_seed_000 took 1982.4s (30 recycles)
2024-12-09 00:43:18,020 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=47.8 pTM=0.282 ipTM=0.309
2024-12-09 00:44:22,192 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=48.1 pTM=0.293 ipTM=0.334 tol=28.7
2024-12-09 00:45:26,318 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=47.5 pTM=0.299 ipTM=0.344 tol=11.5
2024-12-09 00:46:30,421 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=47.6 pTM=0.297 ipTM=0.342 tol=6.89
2024-12-09 00:47:34,597 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=47.7 pTM=0.297 ipTM=0.342 tol=4.3
2024-12-09 00:48:38,733 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=47.3 pTM=0.298 ipTM=0.344 tol=3.29
2024-12-09 00:49:42,826 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=47.2 pTM=0.294 ipTM=0.339 tol=2.95
2024-12-09 00:50:46,876 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=47.5 pTM=0.295 ipTM=0.343 tol=1.98
2024-12-09 00:51:50,929 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=47.6 pTM=0.294 ipTM=0.339 tol=2.11
2024-12-09 00:52:55,007 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=47.3 pTM=0.294 ipTM=0.339 tol=2.02
2024-12-09 00:53:59,104 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=47.2 pTM=0.292 ipTM=0.337 tol=2.61
2024-12-09 00:55:03,197 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=47.3 pTM=0.294 ipTM=0.337 tol=2.33
2024-12-09 00:56:07,258 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=47.2 pTM=0.294 ipTM=0.338 tol=2.42
2024-12-09 00:57:11,324 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=47.5 pTM=0.294 ipTM=0.338 tol=2.27
2024-12-09 00:58:15,397 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=47.2 pTM=0.294 ipTM=0.338 tol=1.73
2024-12-09 00:59:19,493 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=47.2 pTM=0.294 ipTM=0.338 tol=1.63
2024-12-09 01:00:23,582 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=47.3 pTM=0.295 ipTM=0.341 tol=1.86
2024-12-09 01:01:27,687 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=47.5 pTM=0.296 ipTM=0.342 tol=2.15
2024-12-09 01:02:31,793 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=47.4 pTM=0.294 ipTM=0.34 tol=1.98
2024-12-09 01:03:35,913 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=47 pTM=0.294 ipTM=0.338 tol=2.14
2024-12-09 01:04:40,003 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=47.3 pTM=0.294 ipTM=0.338 tol=2.38
2024-12-09 01:05:44,085 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=47.2 pTM=0.293 ipTM=0.339 tol=1.7
2024-12-09 01:06:48,149 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=47.4 pTM=0.295 ipTM=0.339 tol=2
2024-12-09 01:07:52,221 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=47.1 pTM=0.294 ipTM=0.339 tol=1.81
2024-12-09 01:08:56,338 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=47.5 pTM=0.294 ipTM=0.339 tol=1.79
2024-12-09 01:10:00,469 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=47.2 pTM=0.294 ipTM=0.339 tol=2.02
2024-12-09 01:11:04,572 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=47.2 pTM=0.294 ipTM=0.339 tol=2.49
2024-12-09 01:12:08,677 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=47 pTM=0.294 ipTM=0.337 tol=3.04
2024-12-09 01:13:12,753 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=47 pTM=0.295 ipTM=0.34 tol=3.86
2024-12-09 01:14:16,796 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=47.3 pTM=0.296 ipTM=0.341 tol=3.74
2024-12-09 01:15:20,837 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=47.5 pTM=0.297 ipTM=0.343 tol=2.5
2024-12-09 01:15:20,839 alphafold2_multimer_v3_model_3_seed_000 took 1987.0s (30 recycles)
2024-12-09 01:16:27,016 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=45.6 pTM=0.243 ipTM=0.239
2024-12-09 01:17:31,349 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=48.3 pTM=0.264 ipTM=0.276 tol=30.5
2024-12-09 01:18:35,664 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=50.2 pTM=0.281 ipTM=0.309 tol=10.9
2024-12-09 01:19:39,947 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=50.4 pTM=0.289 ipTM=0.325 tol=6.43
2024-12-09 01:20:44,222 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=50.4 pTM=0.291 ipTM=0.327 tol=6.97
2024-12-09 01:21:48,446 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=50.4 pTM=0.296 ipTM=0.336 tol=7.37
2024-12-09 01:22:52,684 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=50.2 pTM=0.292 ipTM=0.331 tol=6.29
2024-12-09 01:23:56,928 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=50.2 pTM=0.293 ipTM=0.332 tol=7.43
2024-12-09 01:25:01,186 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=50.3 pTM=0.293 ipTM=0.332 tol=7.02
2024-12-09 01:26:05,434 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=50.4 pTM=0.294 ipTM=0.336 tol=4.78
2024-12-09 01:27:09,685 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=50.2 pTM=0.291 ipTM=0.331 tol=4.09
2024-12-09 01:28:13,919 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=50.4 pTM=0.29 ipTM=0.328 tol=5.25
2024-12-09 01:29:18,096 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=50.2 pTM=0.292 ipTM=0.33 tol=5.31
2024-12-09 01:30:22,273 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=50.3 pTM=0.292 ipTM=0.33 tol=5.09
2024-12-09 01:31:26,635 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=50.2 pTM=0.291 ipTM=0.329 tol=4.11
2024-12-09 01:32:31,278 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=50.2 pTM=0.287 ipTM=0.323 tol=7.56
2024-12-09 01:33:35,644 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=49.9 pTM=0.291 ipTM=0.33 tol=6.09
2024-12-09 01:34:39,892 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=50.1 pTM=0.291 ipTM=0.331 tol=4.95
2024-12-09 01:35:44,169 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=49.9 pTM=0.289 ipTM=0.326 tol=6.23
2024-12-09 01:36:48,433 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=50 pTM=0.29 ipTM=0.326 tol=3.33
2024-12-09 01:37:52,697 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=49.9 pTM=0.291 ipTM=0.326 tol=4.41
2024-12-09 01:38:56,978 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=50 pTM=0.29 ipTM=0.324 tol=5.03
2024-12-09 01:40:01,270 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=49.8 pTM=0.29 ipTM=0.325 tol=4.34
2024-12-09 01:41:05,603 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=50.1 pTM=0.289 ipTM=0.325 tol=5.31
2024-12-09 01:42:09,880 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=50 pTM=0.289 ipTM=0.324 tol=5.81
2024-12-09 01:43:14,113 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=49.8 pTM=0.287 ipTM=0.323 tol=4.81
2024-12-09 01:44:18,362 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=49.8 pTM=0.288 ipTM=0.323 tol=3.79
2024-12-09 01:45:22,606 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=50.2 pTM=0.29 ipTM=0.326 tol=2
2024-12-09 01:46:26,874 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=50.1 pTM=0.291 ipTM=0.328 tol=5.07
2024-12-09 01:47:31,090 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=50.5 pTM=0.292 ipTM=0.327 tol=4.2
2024-12-09 01:48:35,292 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=50.2 pTM=0.293 ipTM=0.329 tol=2.75
2024-12-09 01:48:35,293 alphafold2_multimer_v3_model_4_seed_000 took 1992.7s (30 recycles)
2024-12-09 01:49:41,330 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=46.6 pTM=0.258 ipTM=0.273
2024-12-09 01:50:45,540 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=45.4 pTM=0.269 ipTM=0.293 tol=28.4
2024-12-09 01:51:49,722 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=45.9 pTM=0.282 ipTM=0.31 tol=11.2
2024-12-09 01:52:53,871 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=46.5 pTM=0.283 ipTM=0.311 tol=6.64
2024-12-09 01:53:58,029 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=46.5 pTM=0.283 ipTM=0.311 tol=5.13
2024-12-09 01:55:02,204 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=46.4 pTM=0.287 ipTM=0.314 tol=3.74
2024-12-09 01:56:06,330 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=46.6 pTM=0.284 ipTM=0.312 tol=3.75
2024-12-09 01:57:10,429 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=46.8 pTM=0.285 ipTM=0.313 tol=5.34
2024-12-09 01:58:14,500 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=46.8 pTM=0.285 ipTM=0.313 tol=4.36
2024-12-09 01:59:18,559 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=46.7 pTM=0.284 ipTM=0.313 tol=3.81
2024-12-09 02:00:22,625 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=46.7 pTM=0.284 ipTM=0.312 tol=6.59
2024-12-09 02:01:26,729 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=46.7 pTM=0.285 ipTM=0.313 tol=4.59
2024-12-09 02:02:30,805 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=46.5 pTM=0.288 ipTM=0.317 tol=3.88
2024-12-09 02:03:34,898 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=46.9 pTM=0.286 ipTM=0.315 tol=3.23
2024-12-09 02:04:38,975 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=46.7 pTM=0.286 ipTM=0.313 tol=3.46
2024-12-09 02:05:43,055 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=46.8 pTM=0.286 ipTM=0.315 tol=3.52
2024-12-09 02:06:47,130 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=46.6 pTM=0.285 ipTM=0.315 tol=4.01
2024-12-09 02:07:51,224 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=46.8 pTM=0.287 ipTM=0.316 tol=3.67
2024-12-09 02:08:55,315 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=46.4 pTM=0.286 ipTM=0.317 tol=4.32
2024-12-09 02:09:59,392 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=46.3 pTM=0.286 ipTM=0.315 tol=4.51
2024-12-09 02:11:03,473 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=46.4 pTM=0.284 ipTM=0.311 tol=3.98
2024-12-09 02:12:07,550 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=46.4 pTM=0.284 ipTM=0.313 tol=4.54
2024-12-09 02:13:11,571 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=46.4 pTM=0.285 ipTM=0.312 tol=2.31
2024-12-09 02:14:15,586 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=46.3 pTM=0.284 ipTM=0.312 tol=2.44
2024-12-09 02:15:19,642 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=46.6 pTM=0.284 ipTM=0.311 tol=2.89
2024-12-09 02:16:23,606 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=46.2 pTM=0.283 ipTM=0.312 tol=5.21
2024-12-09 02:17:27,595 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=46.4 pTM=0.284 ipTM=0.312 tol=2.1
2024-12-09 02:18:31,598 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=46.4 pTM=0.284 ipTM=0.312 tol=2.27
2024-12-09 02:19:35,626 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=46.3 pTM=0.284 ipTM=0.312 tol=3.19
2024-12-09 02:20:39,649 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=46.5 pTM=0.285 ipTM=0.312 tol=5.02
2024-12-09 02:21:43,649 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=46.3 pTM=0.284 ipTM=0.312 tol=2.73
2024-12-09 02:21:43,650 alphafold2_multimer_v3_model_5_seed_000 took 1986.6s (30 recycles)
2024-12-09 02:21:45,409 reranking models by 'multimer' metric
2024-12-09 02:21:49,611 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 02:26:20,231 Relaxation took 274.8s
2024-12-09 02:26:20,232 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=47.5 pTM=0.297 ipTM=0.343
2024-12-09 02:32:21,013 Relaxation took 360.8s
2024-12-09 02:32:21,013 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=48.3 pTM=0.291 ipTM=0.336
2024-12-09 02:36:19,838 Relaxation took 238.8s
2024-12-09 02:36:19,839 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=50.2 pTM=0.293 ipTM=0.329
2024-12-09 02:43:01,204 Relaxation took 401.4s
2024-12-09 02:43:01,204 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=47.8 pTM=0.285 ipTM=0.314
2024-12-09 02:50:03,652 Relaxation took 422.4s
2024-12-09 02:50:03,652 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=46.3 pTM=0.284 ipTM=0.312
2024-12-09 02:50:07,555 Done