2024-12-08 23:33:35,475 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 23:33:35,782 Running on GPU
2024-12-08 23:33:40,160 Found 6 citations for tools or databases
2024-12-08 23:33:40,160 Query 1/1: TRIM28_ZNF616 (length 1616)
2024-12-08 23:33:40,475 Sleeping for 5s. Reason: PENDING
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2024-12-08 23:34:48,794 Sleeping for 7s. Reason: RUNNING
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2024-12-08 23:37:02,492 Sleeping for 9s. Reason: RUNNING
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2024-12-08 23:37:20,014 Sleeping for 6s. Reason: RUNNING
2024-12-08 23:37:26,628 Sleeping for 6s. Reason: RUNNING
2024-12-08 23:37:32,891 Sleeping for 7s. Reason: RUNNING
2024-12-08 23:37:40,143 Sleeping for 6s. Reason: RUNNING
2024-12-08 23:37:46,398 Sleeping for 8s. Reason: RUNNING
2024-12-08 23:37:54,653 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:38:03,911 Sleeping for 10s. Reason: RUNNING
2024-12-08 23:38:14,176 Sleeping for 10s. Reason: RUNNING
2024-12-08 23:38:32,527 Sleeping for 7s. Reason: PENDING
2024-12-08 23:38:39,779 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:38:49,042 Sleeping for 6s. Reason: RUNNING
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2024-12-08 23:39:28,322 Sleeping for 7s. Reason: RUNNING
2024-12-08 23:39:35,582 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:39:44,839 Sleeping for 6s. Reason: RUNNING
2024-12-08 23:39:51,092 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:40:00,350 Sleeping for 8s. Reason: RUNNING
2024-12-08 23:40:08,604 Sleeping for 10s. Reason: RUNNING
2024-12-08 23:40:18,865 Sleeping for 5s. Reason: RUNNING
2024-12-08 23:40:24,119 Sleeping for 5s. Reason: RUNNING
2024-12-08 23:40:29,378 Sleeping for 5s. Reason: RUNNING
2024-12-08 23:40:34,632 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:40:43,893 Sleeping for 8s. Reason: RUNNING
2024-12-08 23:40:52,155 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:41:01,419 Sleeping for 10s. Reason: RUNNING
2024-12-08 23:41:11,681 Sleeping for 5s. Reason: RUNNING
2024-12-08 23:41:23,083 Setting max_seq=508, max_extra_seq=2048
2024-12-08 23:44:38,477 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=51.3 pTM=0.254 ipTM=0.271
2024-12-08 23:45:57,027 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=49.6 pTM=0.267 ipTM=0.294 tol=9.91
2024-12-08 23:47:15,534 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=49.3 pTM=0.273 ipTM=0.298 tol=21.8
2024-12-08 23:48:34,006 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=49.3 pTM=0.282 ipTM=0.313 tol=6.58
2024-12-08 23:49:52,460 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=48.7 pTM=0.281 ipTM=0.312 tol=5.8
2024-12-08 23:51:10,905 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=48.5 pTM=0.281 ipTM=0.311 tol=4.55
2024-12-08 23:52:29,329 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=48.2 pTM=0.282 ipTM=0.311 tol=5.29
2024-12-08 23:53:47,767 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=49.2 pTM=0.285 ipTM=0.315 tol=4.29
2024-12-08 23:55:06,174 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=48.8 pTM=0.285 ipTM=0.312 tol=3.43
2024-12-08 23:56:24,595 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=48.8 pTM=0.283 ipTM=0.309 tol=1.97
2024-12-08 23:57:43,016 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=48.8 pTM=0.284 ipTM=0.309 tol=2.51
2024-12-08 23:59:01,431 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=49.1 pTM=0.286 ipTM=0.311 tol=2.87
2024-12-09 00:00:19,825 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=49 pTM=0.285 ipTM=0.308 tol=2.22
2024-12-09 00:01:38,181 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=49.2 pTM=0.286 ipTM=0.31 tol=2.07
2024-12-09 00:02:56,563 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=48.6 pTM=0.285 ipTM=0.308 tol=2.7
2024-12-09 00:04:14,934 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=48.9 pTM=0.287 ipTM=0.311 tol=1.59
2024-12-09 00:05:33,343 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=48.8 pTM=0.287 ipTM=0.314 tol=1.62
2024-12-09 00:06:51,746 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=48.7 pTM=0.287 ipTM=0.312 tol=2.42
2024-12-09 00:08:10,170 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=48.5 pTM=0.286 ipTM=0.312 tol=2.36
2024-12-09 00:09:28,603 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=48.8 pTM=0.285 ipTM=0.31 tol=2.6
2024-12-09 00:10:47,008 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=48.5 pTM=0.286 ipTM=0.311 tol=2.17
2024-12-09 00:12:05,414 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=49 pTM=0.284 ipTM=0.308 tol=1.72
2024-12-09 00:13:23,850 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=49 pTM=0.282 ipTM=0.306 tol=2.09
2024-12-09 00:14:42,306 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=48.4 pTM=0.283 ipTM=0.307 tol=3.43
2024-12-09 00:16:00,739 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=48.9 pTM=0.284 ipTM=0.309 tol=3.47
2024-12-09 00:17:19,178 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=48.6 pTM=0.285 ipTM=0.312 tol=2.45
2024-12-09 00:18:37,613 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=49.1 pTM=0.285 ipTM=0.312 tol=2.33
2024-12-09 00:19:56,048 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=48.6 pTM=0.286 ipTM=0.313 tol=2.56
2024-12-09 00:21:14,449 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=48.8 pTM=0.284 ipTM=0.311 tol=2.12
2024-12-09 00:22:32,859 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=48.8 pTM=0.282 ipTM=0.309 tol=3.06
2024-12-09 00:23:51,257 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=49.1 pTM=0.283 ipTM=0.309 tol=3.3
2024-12-09 00:23:51,258 alphafold2_multimer_v3_model_1_seed_000 took 2543.2s (30 recycles)
2024-12-09 00:25:11,371 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=47.1 pTM=0.258 ipTM=0.277
2024-12-09 00:26:29,910 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=48.4 pTM=0.285 ipTM=0.327 tol=23.3
2024-12-09 00:27:48,455 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=48.9 pTM=0.291 ipTM=0.339 tol=7.45
2024-12-09 00:29:07,021 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=49 pTM=0.293 ipTM=0.338 tol=6.92
2024-12-09 00:30:25,597 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=48.9 pTM=0.29 ipTM=0.334 tol=5.25
2024-12-09 00:31:44,155 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=49.2 pTM=0.289 ipTM=0.332 tol=4.39
2024-12-09 00:33:02,736 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=48.8 pTM=0.292 ipTM=0.334 tol=3.71
2024-12-09 00:34:21,302 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=49.5 pTM=0.293 ipTM=0.338 tol=3.34
2024-12-09 00:35:39,854 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=49.2 pTM=0.293 ipTM=0.334 tol=3.08
2024-12-09 00:36:58,413 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=49.2 pTM=0.292 ipTM=0.331 tol=2.37
2024-12-09 00:38:17,022 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=49.4 pTM=0.292 ipTM=0.333 tol=2.03
2024-12-09 00:39:35,632 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=49.6 pTM=0.292 ipTM=0.334 tol=2.08
2024-12-09 00:40:54,233 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=49.5 pTM=0.291 ipTM=0.332 tol=3.07
2024-12-09 00:42:12,828 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=50 pTM=0.292 ipTM=0.333 tol=2.91
2024-12-09 00:43:31,433 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=49.2 pTM=0.293 ipTM=0.332 tol=2.44
2024-12-09 00:44:50,060 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=49.3 pTM=0.292 ipTM=0.33 tol=3.48
2024-12-09 00:46:08,648 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=49.2 pTM=0.295 ipTM=0.335 tol=4.35
2024-12-09 00:47:27,244 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=49.7 pTM=0.294 ipTM=0.334 tol=3.86
2024-12-09 00:48:45,853 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=49.7 pTM=0.293 ipTM=0.334 tol=3.57
2024-12-09 00:50:04,479 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=49.6 pTM=0.291 ipTM=0.331 tol=4.78
2024-12-09 00:51:23,072 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=49.4 pTM=0.291 ipTM=0.331 tol=3.29
2024-12-09 00:52:41,656 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=49.9 pTM=0.29 ipTM=0.329 tol=3.09
2024-12-09 00:54:00,255 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=49.7 pTM=0.29 ipTM=0.326 tol=4.15
2024-12-09 00:55:18,813 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=49.5 pTM=0.293 ipTM=0.328 tol=3.17
2024-12-09 00:56:37,407 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=49.9 pTM=0.292 ipTM=0.328 tol=2.99
2024-12-09 00:57:56,004 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=49.4 pTM=0.295 ipTM=0.33 tol=4.25
2024-12-09 00:59:14,615 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=50 pTM=0.294 ipTM=0.325 tol=4.23
2024-12-09 01:00:33,203 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=49.4 pTM=0.295 ipTM=0.326 tol=3.11
2024-12-09 01:01:51,759 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=49.7 pTM=0.292 ipTM=0.321 tol=3.57
2024-12-09 01:03:10,360 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=49.6 pTM=0.292 ipTM=0.32 tol=3.34
2024-12-09 01:04:28,978 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=49.6 pTM=0.293 ipTM=0.322 tol=3.61
2024-12-09 01:04:28,980 alphafold2_multimer_v3_model_2_seed_000 took 2436.2s (30 recycles)
2024-12-09 01:05:49,511 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=48 pTM=0.277 ipTM=0.316
2024-12-09 01:07:08,450 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=47.9 pTM=0.286 ipTM=0.326 tol=31.3
2024-12-09 01:08:27,331 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=47.5 pTM=0.292 ipTM=0.335 tol=12
2024-12-09 01:09:46,153 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=46.4 pTM=0.292 ipTM=0.334 tol=6.58
2024-12-09 01:11:04,986 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=46.7 pTM=0.292 ipTM=0.334 tol=5.37
2024-12-09 01:12:23,779 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=46.8 pTM=0.295 ipTM=0.335 tol=5.75
2024-12-09 01:13:42,571 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=46.8 pTM=0.295 ipTM=0.335 tol=6.81
2024-12-09 01:15:01,340 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=47.1 pTM=0.295 ipTM=0.336 tol=5.02
2024-12-09 01:16:20,113 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=47 pTM=0.295 ipTM=0.334 tol=4.05
2024-12-09 01:17:38,871 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=46.8 pTM=0.295 ipTM=0.333 tol=2.24
2024-12-09 01:18:57,671 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=46.8 pTM=0.296 ipTM=0.335 tol=4.54
2024-12-09 01:20:16,421 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=46.9 pTM=0.296 ipTM=0.334 tol=4.39
2024-12-09 01:21:35,190 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=46.8 pTM=0.296 ipTM=0.334 tol=3
2024-12-09 01:22:53,939 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=47.3 pTM=0.297 ipTM=0.334 tol=2.69
2024-12-09 01:24:12,694 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=46.8 pTM=0.296 ipTM=0.334 tol=4
2024-12-09 01:25:31,462 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=47 pTM=0.297 ipTM=0.334 tol=2.97
2024-12-09 01:26:50,226 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=46.9 pTM=0.296 ipTM=0.332 tol=3.16
2024-12-09 01:28:08,999 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=47 pTM=0.297 ipTM=0.333 tol=2.7
2024-12-09 01:29:27,738 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=46.9 pTM=0.296 ipTM=0.333 tol=3.23
2024-12-09 01:30:46,515 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=47.1 pTM=0.296 ipTM=0.332 tol=2.6
2024-12-09 01:32:05,264 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=46.9 pTM=0.297 ipTM=0.333 tol=2.97
2024-12-09 01:33:24,008 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=47.2 pTM=0.297 ipTM=0.333 tol=1.94
2024-12-09 01:34:42,714 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=47.2 pTM=0.298 ipTM=0.333 tol=4.13
2024-12-09 01:36:01,453 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=47 pTM=0.296 ipTM=0.333 tol=4.28
2024-12-09 01:37:20,210 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=47.1 pTM=0.297 ipTM=0.333 tol=2.6
2024-12-09 01:38:38,905 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=46.8 pTM=0.299 ipTM=0.335 tol=3.35
2024-12-09 01:39:57,632 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=47.3 pTM=0.299 ipTM=0.336 tol=3.01
2024-12-09 01:41:16,405 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=46.8 pTM=0.297 ipTM=0.334 tol=3.55
2024-12-09 01:42:35,116 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=47.2 pTM=0.299 ipTM=0.335 tol=3.2
2024-12-09 01:43:53,808 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=47.1 pTM=0.297 ipTM=0.334 tol=2.98
2024-12-09 01:45:12,507 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=47.2 pTM=0.297 ipTM=0.335 tol=1.73
2024-12-09 01:45:12,508 alphafold2_multimer_v3_model_3_seed_000 took 2442.0s (30 recycles)
2024-12-09 01:46:33,241 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=47.3 pTM=0.24 ipTM=0.239
2024-12-09 01:47:52,429 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=49.4 pTM=0.258 ipTM=0.265 tol=30.2
2024-12-09 01:49:11,727 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=51.1 pTM=0.275 ipTM=0.296 tol=21.2
2024-12-09 01:50:30,991 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=51.8 pTM=0.284 ipTM=0.306 tol=11.1
2024-12-09 01:51:50,169 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=51.9 pTM=0.282 ipTM=0.304 tol=5.7
2024-12-09 01:53:09,286 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=52.2 pTM=0.284 ipTM=0.307 tol=7.57
2024-12-09 01:54:28,429 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=52.1 pTM=0.285 ipTM=0.307 tol=3.08
2024-12-09 01:55:47,508 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=52.5 pTM=0.285 ipTM=0.309 tol=3.27
2024-12-09 01:57:06,616 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=52.3 pTM=0.284 ipTM=0.306 tol=2.85
2024-12-09 01:58:25,684 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=52.4 pTM=0.282 ipTM=0.304 tol=3.5
2024-12-09 01:59:44,779 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=52.3 pTM=0.282 ipTM=0.304 tol=3.46
2024-12-09 02:01:03,850 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=52.4 pTM=0.282 ipTM=0.305 tol=3.65
2024-12-09 02:02:22,924 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=52.2 pTM=0.282 ipTM=0.302 tol=5.61
2024-12-09 02:03:42,020 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=52.3 pTM=0.283 ipTM=0.305 tol=5.12
2024-12-09 02:05:01,170 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=52.1 pTM=0.282 ipTM=0.304 tol=4.32
2024-12-09 02:06:20,278 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=52.1 pTM=0.284 ipTM=0.304 tol=5.11
2024-12-09 02:07:39,355 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=52.3 pTM=0.286 ipTM=0.308 tol=5.23
2024-12-09 02:08:58,453 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=52.3 pTM=0.285 ipTM=0.307 tol=6.84
2024-12-09 02:10:17,511 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=52.3 pTM=0.284 ipTM=0.307 tol=5.75
2024-12-09 02:11:36,557 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=52.6 pTM=0.283 ipTM=0.303 tol=3.12
2024-12-09 02:12:55,578 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=52.1 pTM=0.284 ipTM=0.305 tol=3.13
2024-12-09 02:14:14,614 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=52.1 pTM=0.281 ipTM=0.302 tol=2.33
2024-12-09 02:15:33,679 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=51.9 pTM=0.282 ipTM=0.303 tol=1.97
2024-12-09 02:16:52,720 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=52 pTM=0.284 ipTM=0.305 tol=2.25
2024-12-09 02:18:11,780 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=52.3 pTM=0.285 ipTM=0.308 tol=2.05
2024-12-09 02:19:30,778 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=52.3 pTM=0.289 ipTM=0.311 tol=3.22
2024-12-09 02:20:49,803 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=52.3 pTM=0.29 ipTM=0.314 tol=4.8
2024-12-09 02:22:08,826 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=52.4 pTM=0.287 ipTM=0.309 tol=4.71
2024-12-09 02:23:27,858 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=52.5 pTM=0.286 ipTM=0.309 tol=3.89
2024-12-09 02:24:46,827 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=52.8 pTM=0.289 ipTM=0.311 tol=5.22
2024-12-09 02:26:05,822 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=52.3 pTM=0.29 ipTM=0.312 tol=2.39
2024-12-09 02:26:05,824 alphafold2_multimer_v3_model_4_seed_000 took 2451.8s (30 recycles)
2024-12-09 02:27:26,325 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=47.3 pTM=0.256 ipTM=0.279
2024-12-09 02:28:45,119 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=46.6 pTM=0.263 ipTM=0.286 tol=25.8
2024-12-09 02:30:03,915 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=47 pTM=0.275 ipTM=0.302 tol=7.77
2024-12-09 02:31:22,682 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=46.4 pTM=0.282 ipTM=0.309 tol=4.52
2024-12-09 02:32:41,469 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=46.6 pTM=0.281 ipTM=0.308 tol=5.15
2024-12-09 02:34:00,168 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=46.5 pTM=0.284 ipTM=0.309 tol=3.55
2024-12-09 02:35:18,866 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=46.5 pTM=0.284 ipTM=0.31 tol=3.04
2024-12-09 02:36:37,591 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=47.2 pTM=0.284 ipTM=0.312 tol=3.29
2024-12-09 02:37:56,344 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=46.6 pTM=0.284 ipTM=0.31 tol=6.3
2024-12-09 02:39:15,073 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=46.5 pTM=0.283 ipTM=0.308 tol=5.06
2024-12-09 02:40:33,789 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=46.6 pTM=0.282 ipTM=0.307 tol=3.78
2024-12-09 02:41:52,499 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=46.9 pTM=0.283 ipTM=0.309 tol=3.63
2024-12-09 02:43:11,155 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=46.9 pTM=0.282 ipTM=0.307 tol=3.15
2024-12-09 02:44:29,799 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=47.3 pTM=0.282 ipTM=0.307 tol=3.02
2024-12-09 02:45:48,406 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=46.9 pTM=0.284 ipTM=0.31 tol=3.23
2024-12-09 02:47:06,975 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=47 pTM=0.285 ipTM=0.31 tol=3.55
2024-12-09 02:48:25,534 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=46.9 pTM=0.285 ipTM=0.312 tol=4.3
2024-12-09 02:49:44,105 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=46.9 pTM=0.286 ipTM=0.312 tol=2.91
2024-12-09 02:51:02,682 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=46.8 pTM=0.286 ipTM=0.313 tol=2.56
2024-12-09 02:52:21,325 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=47.2 pTM=0.286 ipTM=0.31 tol=5.2
2024-12-09 02:53:39,951 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=46.7 pTM=0.285 ipTM=0.312 tol=1.86
2024-12-09 02:54:58,580 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=46.8 pTM=0.283 ipTM=0.311 tol=3.76
2024-12-09 02:56:17,203 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=46.8 pTM=0.284 ipTM=0.31 tol=4.08
2024-12-09 02:57:35,818 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=46.3 pTM=0.282 ipTM=0.308 tol=3.94
2024-12-09 02:58:54,423 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=46.9 pTM=0.284 ipTM=0.309 tol=4.73
2024-12-09 03:00:13,041 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=44.7 pTM=0.287 ipTM=0.315 tol=17.1
2024-12-09 03:01:31,698 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=46.4 pTM=0.285 ipTM=0.311 tol=14.5
2024-12-09 03:02:50,312 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=46.6 pTM=0.289 ipTM=0.316 tol=7.12
2024-12-09 03:04:08,919 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=47 pTM=0.286 ipTM=0.313 tol=4.63
2024-12-09 03:05:27,554 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=47.1 pTM=0.286 ipTM=0.312 tol=2.65
2024-12-09 03:06:46,165 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=46.9 pTM=0.284 ipTM=0.311 tol=3.43
2024-12-09 03:06:46,166 alphafold2_multimer_v3_model_5_seed_000 took 2438.8s (30 recycles)
2024-12-09 03:06:47,703 reranking models by 'multimer' metric
2024-12-09 03:06:51,397 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 03:11:47,090 Relaxation took 299.4s
2024-12-09 03:11:47,091 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=47.2 pTM=0.297 ipTM=0.335
2024-12-09 03:16:10,454 Relaxation took 263.4s
2024-12-09 03:16:10,454 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=49.6 pTM=0.293 ipTM=0.322
2024-12-09 03:19:45,880 Relaxation took 215.4s
2024-12-09 03:19:45,880 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=52.3 pTM=0.29 ipTM=0.312
2024-12-09 03:23:38,277 Relaxation took 232.4s
2024-12-09 03:23:38,277 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=46.9 pTM=0.284 ipTM=0.311
2024-12-09 03:27:51,354 Relaxation took 253.1s
2024-12-09 03:27:51,354 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=49.1 pTM=0.283 ipTM=0.309
2024-12-09 03:27:55,061 Done