2024-12-08 23:35:36,886 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 23:35:37,199 Running on GPU
2024-12-08 23:35:41,575 Found 6 citations for tools or databases
2024-12-08 23:35:41,575 Query 1/1: TRIM28_ZNF620 (length 1257)
2024-12-08 23:35:41,850 Sleeping for 5s. Reason: PENDING
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2024-12-08 23:38:47,790 Sleeping for 8s. Reason: RUNNING
2024-12-08 23:38:56,051 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:39:05,308 Sleeping for 5s. Reason: RUNNING
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2024-12-08 23:39:29,081 Sleeping for 8s. Reason: RUNNING
2024-12-08 23:39:49,269 Sleeping for 9s. Reason: PENDING
2024-12-08 23:39:58,525 Sleeping for 8s. Reason: RUNNING
2024-12-08 23:40:06,787 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:40:16,049 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:40:25,304 Sleeping for 5s. Reason: RUNNING
2024-12-08 23:40:30,558 Sleeping for 10s. Reason: RUNNING
2024-12-08 23:40:40,820 Sleeping for 10s. Reason: RUNNING
2024-12-08 23:40:51,083 Sleeping for 7s. Reason: RUNNING
2024-12-08 23:40:58,342 Sleeping for 6s. Reason: RUNNING
2024-12-08 23:41:04,597 Sleeping for 10s. Reason: RUNNING
2024-12-08 23:41:14,856 Sleeping for 5s. Reason: RUNNING
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2024-12-08 23:41:36,627 Sleeping for 5s. Reason: RUNNING
2024-12-08 23:41:41,885 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:41:51,141 Sleeping for 8s. Reason: RUNNING
2024-12-08 23:41:59,398 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:42:13,296 Setting max_seq=508, max_extra_seq=2048
2024-12-08 23:45:39,841 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=50.1 pTM=0.303 ipTM=0.3
2024-12-08 23:46:20,355 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=49.2 pTM=0.297 ipTM=0.301 tol=14.3
2024-12-08 23:47:01,063 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=49.9 pTM=0.308 ipTM=0.304 tol=24.3
2024-12-08 23:47:41,870 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=50 pTM=0.313 ipTM=0.312 tol=5.11
2024-12-08 23:48:22,744 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=49.9 pTM=0.315 ipTM=0.314 tol=6.68
2024-12-08 23:49:03,676 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=50.1 pTM=0.315 ipTM=0.312 tol=2.95
2024-12-08 23:49:44,664 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=50.2 pTM=0.314 ipTM=0.311 tol=2.38
2024-12-08 23:50:25,708 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=50.5 pTM=0.316 ipTM=0.312 tol=2
2024-12-08 23:51:06,769 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=50.6 pTM=0.316 ipTM=0.313 tol=1.92
2024-12-08 23:51:47,824 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=50.6 pTM=0.316 ipTM=0.313 tol=1.8
2024-12-08 23:52:28,876 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=50.4 pTM=0.316 ipTM=0.312 tol=1.94
2024-12-08 23:53:09,922 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=50.6 pTM=0.318 ipTM=0.314 tol=1.52
2024-12-08 23:53:50,958 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=50.4 pTM=0.315 ipTM=0.313 tol=4.35
2024-12-08 23:54:31,972 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=50.8 pTM=0.316 ipTM=0.312 tol=5.11
2024-12-08 23:55:13,006 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=50.4 pTM=0.314 ipTM=0.311 tol=1.31
2024-12-08 23:55:54,040 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=50.4 pTM=0.316 ipTM=0.313 tol=1.26
2024-12-08 23:56:35,107 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=50.5 pTM=0.314 ipTM=0.31 tol=1.04
2024-12-08 23:57:16,136 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=50.4 pTM=0.316 ipTM=0.314 tol=1.11
2024-12-08 23:57:57,209 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=50.2 pTM=0.315 ipTM=0.312 tol=4.9
2024-12-08 23:58:38,277 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=50.4 pTM=0.314 ipTM=0.311 tol=5.01
2024-12-08 23:59:19,288 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=50.4 pTM=0.316 ipTM=0.313 tol=1.35
2024-12-09 00:00:00,285 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=50.6 pTM=0.316 ipTM=0.312 tol=1.33
2024-12-09 00:00:41,225 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=50.4 pTM=0.316 ipTM=0.312 tol=1.32
2024-12-09 00:01:22,145 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=50.7 pTM=0.316 ipTM=0.312 tol=1.22
2024-12-09 00:02:03,089 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=50.2 pTM=0.313 ipTM=0.31 tol=1.07
2024-12-09 00:02:44,019 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=50.6 pTM=0.32 ipTM=0.316 tol=1.48
2024-12-09 00:03:24,969 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=50.6 pTM=0.317 ipTM=0.315 tol=1.2
2024-12-09 00:04:05,967 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=50.3 pTM=0.315 ipTM=0.313 tol=1.1
2024-12-09 00:04:46,961 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=50.1 pTM=0.316 ipTM=0.313 tol=1.19
2024-12-09 00:05:27,970 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=50.3 pTM=0.317 ipTM=0.316 tol=4.22
2024-12-09 00:06:08,995 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=50.3 pTM=0.316 ipTM=0.314 tol=1.56
2024-12-09 00:06:08,996 alphafold2_multimer_v3_model_1_seed_000 took 1432.1s (30 recycles)
2024-12-09 00:06:51,010 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=48.2 pTM=0.301 ipTM=0.297
2024-12-09 00:07:32,052 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=49.2 pTM=0.324 ipTM=0.329 tol=30.6
2024-12-09 00:08:13,128 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=49.3 pTM=0.321 ipTM=0.319 tol=9.38
2024-12-09 00:08:54,218 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=49.5 pTM=0.324 ipTM=0.32 tol=5.52
2024-12-09 00:09:35,294 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=49.7 pTM=0.324 ipTM=0.321 tol=3.21
2024-12-09 00:10:16,395 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=50 pTM=0.323 ipTM=0.322 tol=3.78
2024-12-09 00:10:57,524 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=50.2 pTM=0.323 ipTM=0.321 tol=3.35
2024-12-09 00:11:38,654 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=50.7 pTM=0.326 ipTM=0.325 tol=3.16
2024-12-09 00:12:19,782 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=50.7 pTM=0.323 ipTM=0.324 tol=3.33
2024-12-09 00:13:00,937 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=50.8 pTM=0.325 ipTM=0.326 tol=2.63
2024-12-09 00:13:42,085 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=50.8 pTM=0.325 ipTM=0.324 tol=3.71
2024-12-09 00:14:23,230 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=50.8 pTM=0.327 ipTM=0.326 tol=2.71
2024-12-09 00:15:04,381 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=50.6 pTM=0.325 ipTM=0.324 tol=3.32
2024-12-09 00:15:45,514 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=50.7 pTM=0.325 ipTM=0.324 tol=3.04
2024-12-09 00:16:26,638 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=50.6 pTM=0.325 ipTM=0.323 tol=1.97
2024-12-09 00:17:07,754 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=50.6 pTM=0.327 ipTM=0.326 tol=1.51
2024-12-09 00:17:48,884 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=50.8 pTM=0.325 ipTM=0.324 tol=1.57
2024-12-09 00:18:29,964 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=50.6 pTM=0.326 ipTM=0.325 tol=1.38
2024-12-09 00:19:11,033 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=50.6 pTM=0.326 ipTM=0.332 tol=1.22
2024-12-09 00:19:52,076 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=50.4 pTM=0.326 ipTM=0.331 tol=1.71
2024-12-09 00:20:33,153 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=50.5 pTM=0.325 ipTM=0.332 tol=1.42
2024-12-09 00:21:14,237 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=50.5 pTM=0.327 ipTM=0.333 tol=1.17
2024-12-09 00:21:55,332 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=50.5 pTM=0.327 ipTM=0.333 tol=1.43
2024-12-09 00:22:36,423 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=50.7 pTM=0.326 ipTM=0.333 tol=1.31
2024-12-09 00:23:17,470 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=50.5 pTM=0.326 ipTM=0.334 tol=1.09
2024-12-09 00:23:58,503 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=50.5 pTM=0.329 ipTM=0.336 tol=0.974
2024-12-09 00:24:39,530 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=50.7 pTM=0.326 ipTM=0.335 tol=1.16
2024-12-09 00:25:20,564 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=50.5 pTM=0.328 ipTM=0.335 tol=0.895
2024-12-09 00:26:01,549 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=50.4 pTM=0.328 ipTM=0.334 tol=1.48
2024-12-09 00:26:42,522 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=50.6 pTM=0.328 ipTM=0.335 tol=1.2
2024-12-09 00:27:23,547 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=50.4 pTM=0.325 ipTM=0.332 tol=1.32
2024-12-09 00:27:23,548 alphafold2_multimer_v3_model_2_seed_000 took 1273.6s (30 recycles)
2024-12-09 00:28:05,696 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=48.3 pTM=0.309 ipTM=0.304
2024-12-09 00:28:46,913 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=49.2 pTM=0.319 ipTM=0.32 tol=30.9
2024-12-09 00:29:28,120 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=49.2 pTM=0.329 ipTM=0.329 tol=9.53
2024-12-09 00:30:09,328 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=48.7 pTM=0.329 ipTM=0.328 tol=6.44
2024-12-09 00:30:50,511 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=48.7 pTM=0.329 ipTM=0.329 tol=5.07
2024-12-09 00:31:31,720 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=49 pTM=0.328 ipTM=0.329 tol=4.91
2024-12-09 00:32:12,912 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=49.1 pTM=0.328 ipTM=0.329 tol=4.3
2024-12-09 00:32:54,097 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=49.1 pTM=0.329 ipTM=0.33 tol=4.09
2024-12-09 00:33:35,252 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=49.3 pTM=0.328 ipTM=0.33 tol=4.02
2024-12-09 00:34:16,428 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=49.1 pTM=0.33 ipTM=0.332 tol=2.57
2024-12-09 00:34:57,586 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=49.2 pTM=0.331 ipTM=0.333 tol=1.76
2024-12-09 00:35:38,761 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=49.2 pTM=0.331 ipTM=0.332 tol=1.82
2024-12-09 00:36:19,909 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=49.2 pTM=0.331 ipTM=0.333 tol=1.19
2024-12-09 00:37:01,077 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=49.2 pTM=0.33 ipTM=0.333 tol=1.82
2024-12-09 00:37:42,274 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=49.1 pTM=0.33 ipTM=0.333 tol=2.22
2024-12-09 00:38:23,485 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=49.1 pTM=0.331 ipTM=0.333 tol=2.37
2024-12-09 00:39:04,680 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=49.2 pTM=0.33 ipTM=0.332 tol=1.67
2024-12-09 00:39:45,843 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=49.1 pTM=0.333 ipTM=0.333 tol=2.1
2024-12-09 00:40:26,996 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=49 pTM=0.331 ipTM=0.333 tol=2.11
2024-12-09 00:41:08,174 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=49.1 pTM=0.332 ipTM=0.332 tol=1.41
2024-12-09 00:41:49,358 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=49.2 pTM=0.331 ipTM=0.331 tol=1.5
2024-12-09 00:42:30,514 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=49.1 pTM=0.332 ipTM=0.333 tol=1.43
2024-12-09 00:43:11,703 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=49.2 pTM=0.332 ipTM=0.332 tol=1.3
2024-12-09 00:43:52,872 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=49.1 pTM=0.332 ipTM=0.332 tol=1.17
2024-12-09 00:44:34,064 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=49 pTM=0.33 ipTM=0.329 tol=1.73
2024-12-09 00:45:15,176 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=49.1 pTM=0.333 ipTM=0.334 tol=1.86
2024-12-09 00:45:56,287 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=49.3 pTM=0.332 ipTM=0.333 tol=1.28
2024-12-09 00:46:37,413 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=49.1 pTM=0.332 ipTM=0.333 tol=1.42
2024-12-09 00:47:18,541 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=49.1 pTM=0.332 ipTM=0.331 tol=1.7
2024-12-09 00:47:59,729 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=49.2 pTM=0.333 ipTM=0.333 tol=1.42
2024-12-09 00:48:40,927 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=49.2 pTM=0.331 ipTM=0.331 tol=1.19
2024-12-09 00:48:40,928 alphafold2_multimer_v3_model_3_seed_000 took 1276.4s (30 recycles)
2024-12-09 00:49:23,186 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=47.2 pTM=0.281 ipTM=0.271
2024-12-09 00:50:04,410 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=49.5 pTM=0.294 ipTM=0.277 tol=32.4
2024-12-09 00:50:45,634 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=50.9 pTM=0.309 ipTM=0.302 tol=8.34
2024-12-09 00:51:26,863 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=51 pTM=0.32 ipTM=0.316 tol=5.4
2024-12-09 00:52:08,118 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=50.9 pTM=0.321 ipTM=0.319 tol=5.75
2024-12-09 00:52:49,357 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=51.4 pTM=0.323 ipTM=0.322 tol=4.39
2024-12-09 00:53:30,566 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=51 pTM=0.323 ipTM=0.322 tol=3.76
2024-12-09 00:54:11,772 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=51.5 pTM=0.327 ipTM=0.325 tol=4.53
2024-12-09 00:54:52,971 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=51.3 pTM=0.325 ipTM=0.324 tol=5.32
2024-12-09 00:55:34,192 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=51.2 pTM=0.325 ipTM=0.324 tol=6.25
2024-12-09 00:56:15,423 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=51.3 pTM=0.324 ipTM=0.322 tol=5.32
2024-12-09 00:56:56,687 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=51.3 pTM=0.325 ipTM=0.324 tol=3.57
2024-12-09 00:57:37,974 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=51.2 pTM=0.323 ipTM=0.321 tol=3.19
2024-12-09 00:58:19,238 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=51.2 pTM=0.322 ipTM=0.32 tol=3.06
2024-12-09 00:59:00,490 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=51.1 pTM=0.322 ipTM=0.322 tol=2.38
2024-12-09 00:59:41,678 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=51 pTM=0.323 ipTM=0.322 tol=2.06
2024-12-09 01:00:22,868 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=51.1 pTM=0.322 ipTM=0.319 tol=2.95
2024-12-09 01:01:04,040 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=51.2 pTM=0.325 ipTM=0.324 tol=3.17
2024-12-09 01:01:45,191 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=51.1 pTM=0.323 ipTM=0.322 tol=1.92
2024-12-09 01:02:26,356 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=51.2 pTM=0.325 ipTM=0.323 tol=2.63
2024-12-09 01:03:07,561 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=51 pTM=0.323 ipTM=0.321 tol=4.88
2024-12-09 01:03:48,777 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=51.2 pTM=0.327 ipTM=0.324 tol=4.19
2024-12-09 01:04:30,019 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=50.8 pTM=0.325 ipTM=0.322 tol=2.26
2024-12-09 01:05:11,281 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=51.2 pTM=0.324 ipTM=0.322 tol=2.12
2024-12-09 01:05:52,576 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=50.9 pTM=0.321 ipTM=0.32 tol=2.27
2024-12-09 01:06:33,830 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=51.3 pTM=0.329 ipTM=0.328 tol=3
2024-12-09 01:07:15,056 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=51.2 pTM=0.328 ipTM=0.329 tol=2.06
2024-12-09 01:07:56,276 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=51.4 pTM=0.329 ipTM=0.328 tol=2.58
2024-12-09 01:08:37,522 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=51.2 pTM=0.326 ipTM=0.326 tol=4.23
2024-12-09 01:09:18,753 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=51.4 pTM=0.327 ipTM=0.327 tol=3.85
2024-12-09 01:09:59,977 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=51 pTM=0.326 ipTM=0.325 tol=2.62
2024-12-09 01:09:59,979 alphafold2_multimer_v3_model_4_seed_000 took 1278.1s (30 recycles)
2024-12-09 01:10:42,134 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=46.7 pTM=0.291 ipTM=0.279
2024-12-09 01:11:23,268 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=48.1 pTM=0.294 ipTM=0.282 tol=26.3
2024-12-09 01:12:04,365 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=49.4 pTM=0.313 ipTM=0.302 tol=6
2024-12-09 01:12:45,487 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=49.3 pTM=0.319 ipTM=0.309 tol=4.86
2024-12-09 01:13:26,625 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=49.7 pTM=0.323 ipTM=0.313 tol=3.65
2024-12-09 01:14:07,762 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=49.7 pTM=0.323 ipTM=0.314 tol=4.32
2024-12-09 01:14:48,892 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=49.7 pTM=0.321 ipTM=0.312 tol=3.14
2024-12-09 01:15:30,007 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=49.6 pTM=0.324 ipTM=0.314 tol=2.88
2024-12-09 01:16:11,138 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=49.6 pTM=0.322 ipTM=0.314 tol=4.6
2024-12-09 01:16:52,271 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=49.6 pTM=0.324 ipTM=0.315 tol=4.38
2024-12-09 01:17:33,416 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=49.6 pTM=0.324 ipTM=0.315 tol=2.07
2024-12-09 01:18:14,546 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=49.7 pTM=0.325 ipTM=0.317 tol=4.59
2024-12-09 01:18:55,693 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=49.5 pTM=0.324 ipTM=0.315 tol=4.49
2024-12-09 01:19:36,857 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=49.6 pTM=0.323 ipTM=0.314 tol=4.24
2024-12-09 01:20:17,992 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=49.5 pTM=0.323 ipTM=0.315 tol=4.34
2024-12-09 01:20:59,101 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=49.4 pTM=0.323 ipTM=0.313 tol=4.27
2024-12-09 01:21:40,226 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=49.6 pTM=0.322 ipTM=0.313 tol=4.65
2024-12-09 01:22:21,373 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=49.5 pTM=0.324 ipTM=0.316 tol=2.2
2024-12-09 01:23:02,507 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=49.6 pTM=0.324 ipTM=0.316 tol=2.28
2024-12-09 01:23:43,697 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=49.3 pTM=0.324 ipTM=0.316 tol=4.51
2024-12-09 01:24:24,865 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=49.7 pTM=0.324 ipTM=0.314 tol=4.14
2024-12-09 01:25:05,980 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=49.2 pTM=0.325 ipTM=0.314 tol=4.09
2024-12-09 01:25:47,127 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=49.4 pTM=0.324 ipTM=0.313 tol=2.03
2024-12-09 01:26:28,253 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=49.3 pTM=0.324 ipTM=0.314 tol=3.65
2024-12-09 01:27:09,391 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=49.4 pTM=0.323 ipTM=0.312 tol=2.06
2024-12-09 01:27:50,534 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=49.2 pTM=0.326 ipTM=0.316 tol=3.67
2024-12-09 01:28:31,676 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=49.8 pTM=0.327 ipTM=0.318 tol=4.03
2024-12-09 01:29:12,804 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=49.2 pTM=0.324 ipTM=0.315 tol=4.2
2024-12-09 01:29:53,938 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=49.3 pTM=0.323 ipTM=0.312 tol=1.47
2024-12-09 01:30:35,049 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=49.4 pTM=0.325 ipTM=0.316 tol=1.27
2024-12-09 01:31:16,168 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=49.5 pTM=0.323 ipTM=0.314 tol=1.25
2024-12-09 01:31:16,169 alphafold2_multimer_v3_model_5_seed_000 took 1275.2s (30 recycles)
2024-12-09 01:31:17,122 reranking models by 'multimer' metric
2024-12-09 01:31:18,354 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 01:34:00,926 Relaxation took 163.8s
2024-12-09 01:34:00,926 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=49.2 pTM=0.331 ipTM=0.331
2024-12-09 01:37:11,912 Relaxation took 191.0s
2024-12-09 01:37:11,913 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=50.4 pTM=0.325 ipTM=0.332
2024-12-09 01:40:03,801 Relaxation took 171.9s
2024-12-09 01:40:03,802 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=51 pTM=0.326 ipTM=0.325
2024-12-09 01:42:35,300 Relaxation took 151.5s
2024-12-09 01:42:35,300 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=49.5 pTM=0.323 ipTM=0.314
2024-12-09 01:45:20,470 Relaxation took 165.2s
2024-12-09 01:45:20,470 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=50.3 pTM=0.316 ipTM=0.314
2024-12-09 01:45:23,059 Done